FvH4_7g06093

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000024
Physical Location & Seq
Forward (+)
6272012 .. 6275079
3068 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g06093.t1

Sequence Viewer

Length: 2955 bp
ATGGGATTGTCATCCCGCCGGTGCTTGTCTAATGTCCCGAATATTGGTCAGCTTTCAAAAAATTTGCTGGTTTTGTTGTTGTTTCATGTTCTTGGAGCTAGCTCCTTATACTCTAGGCAGCAGCAGCCACCTTCTTGCCATGGTGAGGAGCGCGCTGCCTTGCTGCAATTTAAGCAAAACTTCATTGTGGACCCATCTGCTAGTGATGATGATGGTTCCTATCCAAAGGCCTCATCATGGAAAGCAGTTGAAGGAGACCAGAATAGCAACTGCTGCTCATGGGACGGGGTTCAGTGTGATGAGAAGACTGGTCATGTTGTTGATCTTGATCTTAGTAGCAGTTGTCTCTATGGCTCCATCAACTCCAGCAGCAGCCTCTTTCGCCTCGTTCATCTCCGGAGACTGAGTCTTGCTGATAACGACTTCAATTACTCTCAAATTCCTACAACAATTAAGAATCTCTCGAGGCTTAGGTATCTCAACCTTTCCTTCTCTGTGTTTTCTGGCCAAGTCCCATCTGAAATTTCACAAATGTCCAAATTGTCATCCCTTGATCTGTCTAGCAATGTTGATACACTTTCTGGTGAGGGACTGTTGAGGCTTAAAGCAGACAGTCTGGCAAGTCTAGTTCGAAACTTAACTAGTCTTGAAACGCTTCATCTCAGTGACATAAATATATCTTCCTCAGTTCCTGATTCATTGGCGAATTTGTCATTGTCATCCCTTGCTCTAGGGAATTGCAACCTGTATGGCGAATTCCCAATAAGAATTTTCAAGTTACAATACTTGGGATATCTTAGTGTGAGATCAAACCAAGAGCTTTCGGGTTATTTGCCCGAGTTTAATGGAAGTAGTCCTCTCATGTGGCTGTCACTCGGAGGCACTAATTTTTCCAGAACTCTTCCTTCATCGATCGGAGAGCTCGACTCACTGAACCGCTTGGATTTGGCTGAATGCAGTTTCTCAGGTCCAGTTCCTGCTTCACTAGCAAACCTTACCCAACTCACTTATTTGTCTCTTGCAATGAATAATTTTGTTGCCGGGCCTTTGTCTTGGCTTGGTAAGCAAACACAACTTACCTATCTTGATCTCGAAACCATCAATCTGAGTGGTTCCATCCCTTCTTCTCTTGGAAACCTCTCGCAGCTCACTTATCTTCATCTTTTAGATAATCAACTAAGTGGCCCAGTCCCATCTTTGTTTGGTAACCTTAGCAGACTAGCAGACTTAAATCTTGATCTAAACAGATTGAGCGGTTCAGTTCCTGAATCACTGTTCAACCTAAGGGACCTCTACACGCTTTATCTGTATGACAATGACCTTCACGGTAACTTTGACCTTTGTAACCTACCAAGTTCCGTAACAAGACTCGATGTAGGTTGGAACAAACTAGAAGTGCCTCATTGTAACATTGTGAATACAACCCTTCTTCCAAAGCTTACCTTTCTGGGATTGCGAGAGTGCAACTTAACAGAGTTTCCTAATTTCATTAGACATCAACAACACTTGACGTGGCTGGACCTTTCCACAAATAAGTTGCATGGTCAAGTACCCAAATGGATGTGGAATACAAGCACGCAAAGTTTGATGTTACTGGACATCAGGCACAACTTCCTTGCAGGCTTTGGCCAACCGAATTTTGTCCTTCCTTGGGTTAACCTGCAAGCTTTATTTGCTGGGTACAATTTGCTAGATGGATCACCACCTATACCTCCACAGAATATTGTCGTCTGTAGATTCAGCAACAACAAACTTACCGGAGATCTTTCACCATTGATGTGCAATCTCAGTACCGTTCAATACCTTGATTTGTCAAATAACAAGTTGAGTGGCACCATTCTGCCTTGTCTTGGTAACTTCAGTGACACTCTACAAGTTTTAGATCTTCGGAACAACTCCTTCCACGGTATTCTTCCTCAAACATACAGCAACACAAGCAACTTGAAGATGATTGATGTCAGTTATAATCAATTGCATGGGAAAATACCAAGGTCACTAGCTAATTGTATGACGCTCCAGTCTCTTGTTCTCTCAGCCAATAAATTCAGTGATGTTTTCCCTTCTTGGTTGGGAAGTCTCCCAGAGCTTAAACTCTTGGCGATGCACCATAATCAGTTCTATGGTGTGATTGAGAATACCCTAAAAAATCTTCACTTTCCCGAGCTGCGTATACTGGATCTCTCTTGCAATAATTTCACTGGTGAGTTTCCCTCTGAACACATCTTTTCTAGCAATGCGATGAGAGGTATAGTTATGAACCAACCCACATATATGGCGGTATTCTCAGATCTGAATATCCATGGTACTAAGTTCGGTTATATTTTCAAAGTCACGATAACAAATAAAGGTGTGGAGAGATACTACTCGAAGATCCAAGAAGACCTTGGAGTGATTGATATCTCAAGCAACAATTTCCATGGGAAGATTCCAGAATTCATAAGGAACTTGAAAGGGCTTCGCTTTCTCAACATTTCCAATAACAACTTCAACGGCAGCATCCCATTGCGCTTGGAAAATTTGACTTTGCTTGAAGCATTGGACCTTTCACATAACCAGCTCTCAGGAGAGATACCTCAGCAACTAGCGCAGCTCACTTATCTTGCCAGTTTTGATGTCTCTTACAATAATCTCACTGGTTCTGTACCCCAAGGTCTCCAGTTTCACACATTCGGGAACACTTCATATATGGGAAATCCAGGATTATGCGGAGACCCTTTGACAAAGAGATGTGACAACTCCAATGCCCCAGCTCAACTACCACCTTCAAGCAGCAGTGAAGATGATGCTTTTGAATTCGACTGGATATTTGTGTTGGCCGGAGTTGGAAGTGGATTGGTGGTGGGAGTGGTACTTGCAGATGTGGCGATCACACGAAAGCGTGAGCTGTTTCTTGACGTAGCTGGGATGATGATCAAACAGATGAAAAGGATCAGAAGAAGGCAGAGGATGTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

985

Amino Acids

109.09

Weight (kDa)

6.13

Isoelectric Point (pI)

43.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 48 - 100 1.6e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 109 - 236 2e-09 Leucine-rich repeat region
LRR_14 PF23598 287 - 387 5.4e-09 Leucine-rich repeat region
LRR_8 PF13855 623 - 682 3.4e-09 Leucine rich repeat
LRR_8 PF13855 671 - 732 6.9e-06 Leucine rich repeat
LRR_14 PF23598 798 - 875 6.7e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1965
AasI GACNNNNNNGTC 1 cut(s) 2017
Acc36I ACCTGC 1 cut(s) 1668
AccB1I GGYRCC 1 cut(s) 1832
AccBSI CCGCTC 1 cut(s) 1254
AccI GTMKAC 1 cut(s) 2170
AccII CGCG 1 cut(s) 153
AccIII TCCGGA 1 cut(s) 396
AciI CCGC 5 cut(s) 16, 937, 1254, 2276, 2706
AclWI GGATC 4 cut(s) 1705, 2184, 2365, 2936
AcoI YGGCCR 3 cut(s) 505, 1627, 2814
AcuI CTGAAG 1 cut(s) 1843
AfaI GTAC 6 cut(s) 1551, 1682, 1792, 2305, 2643, 2850
AfiI CCNNNNNNNGG 5 cut(s) 44, 145, 237, 1651, 1850
AhlI ACTAGT 1 cut(s) 641
AjiI CACGTC 1 cut(s) 1512
AjnI CCWGG 1 cut(s) 2695
AjuI GAANNNNNNNTTGG 2 cut(s) 2468, 2500
Alw21I GWGCWC 1 cut(s) 924
Alw26I GTCTC 9 cut(s) 249, 350, 394, 1020, 2025, 2081, 2620, 2657, 2703
AlwI GGATC 4 cut(s) 1705, 2184, 2365, 2936
AlwNI CAGNNNCTG 3 cut(s) 692, 977, 1265
Ama87I CYCGRG 3 cut(s) 463, 836, 2159
Aor13HI TCCGGA 1 cut(s) 396
AoxI GGCC 6 cut(s) 228, 505, 1043, 1183, 1627, 2814
ArsI GACNNNNNNTTYG 2 cut(s) 2789, 2821
Asp700I GAANNNNTTC 1 cut(s) 654
AspLEI GCGC 4 cut(s) 153, 155, 2508, 2587
AspS9I GGNCC 7 cut(s) 190, 968, 1043, 1184, 1288, 1519, 2539
AsuC2I CCSGG 1 cut(s) 1042
AsuHPI GGTGA 5 cut(s) 155, 596, 1692, 1761, 2213
AsuII TTCGAA 1 cut(s) 631
AsuNHI GCTAGC 1 cut(s) 98
AvaI CYCGRG 3 cut(s) 463, 836, 2159
AvaII GGWCC 5 cut(s) 190, 968, 1288, 1519, 2539
AxyI CCTNAGG 1 cut(s) 1283
BalI TGGCCA 2 cut(s) 507, 1629
BanI GGYRCC 1 cut(s) 1832
BanII GRGCYC 1 cut(s) 924
BbsI GAAGAC 2 cut(s) 311, 2385
Bbv12I GWGCWC 1 cut(s) 924
BbvCI CCTCAGC 1 cut(s) 2574
BccI CCATC 8 cut(s) 202, 206, 365, 523, 1106, 1124, 1201, 1688
BceAI ACGGC 1 cut(s) 2506
BciT130I CCWGG 1 cut(s) 2697
BclI TGATCA 1 cut(s) 2910
BcnI CCSGG 1 cut(s) 1042
BcoDI GTCTC 9 cut(s) 249, 350, 394, 1020, 2025, 2081, 2620, 2657, 2703
BcuI ACTAGT 1 cut(s) 641
BfmI CTRYAG 1 cut(s) 1732
BfuAI ACCTGC 1 cut(s) 1668
BglII AGATCT 3 cut(s) 1762, 1882, 2287
Bme1390I CCNGG 2 cut(s) 1042, 2697
Bme18I GGWCC 5 cut(s) 190, 968, 1288, 1519, 2539
BmeT110I CYCGRG 3 cut(s) 463, 836, 2159
BmgBI CACGTC 1 cut(s) 1512
BmgT120I GGNCC 7 cut(s) 190, 968, 1043, 1184, 1288, 1519, 2539
BmiI GGNNCC 6 cut(s) 192, 217, 355, 1114, 1289, 1834
BmrFI CCNGG 2 cut(s) 1042, 2697
BmrI ACTGGG 1 cut(s) 1181
BmsI GCATC 3 cut(s) 2091, 2505, 2773
BmtI GCTAGC 1 cut(s) 102
BmuI ACTGGG 1 cut(s) 1181
BpiI GAAGAC 2 cut(s) 311, 2385
BplI GAGNNNNNCTC 4 cut(s) 911, 943, 2195, 2227
BpmI CTGGAG 3 cut(s) 349, 2000, 2639
Bpu10I CCTNAGC 3 cut(s) 470, 1211, 2574
Bpu14I TTCGAA 1 cut(s) 631
BpuEI CTTGAG 1 cut(s) 2386
BpuMI CCSGG 1 cut(s) 1042
Bsa29I ATCGAT 1 cut(s) 911
BsaBI GATNNNNATC 4 cut(s) 10, 327, 2396, 2909
BsaI GGTCTC 3 cut(s) 249, 2657, 2703
BsaJI CCNNGG 8 cut(s) 139, 1649, 1903, 1988, 2299, 2383, 2416, 2647
BsaWI WCCGGW 2 cut(s) 396, 1757
BsaXI ACNNNNNCTCC 2 cut(s) 391, 421
Bsc4I CCNNNNNNNGG 5 cut(s) 44, 145, 237, 1651, 1850
Bse118I RCCGGY 1 cut(s) 18
Bse21I CCTNAGG 1 cut(s) 1283
Bse3DI GCAATG 4 cut(s) 571, 1029, 2239, 2501
Bse8I GATNNNNATC 4 cut(s) 10, 327, 2396, 2909
BseAI TCCGGA 1 cut(s) 396
BseBI CCWGG 1 cut(s) 2697
BseCI ATCGAT 1 cut(s) 911
BseDI CCNNGG 8 cut(s) 139, 1649, 1903, 1988, 2299, 2383, 2416, 2647
BseGI GGATG 8 cut(s) 11, 545, 719, 1116, 1566, 2496, 2910, 2952
BseJI GATNNNNATC 4 cut(s) 10, 327, 2396, 2909
BseLI CCNNNNNNNGG 5 cut(s) 44, 145, 237, 1651, 1850
BseMI GCAATG 4 cut(s) 571, 1029, 2239, 2501
BsePI GCGCGC 1 cut(s) 151
BseRI GAGGAG 1 cut(s) 161
BseYI CCCAGC 3 cut(s) 1676, 2746, 2900
Bsh1236I CGCG 1 cut(s) 153
Bsh1285I CGRYCG 1 cut(s) 915
BshFI GGCC 6 cut(s) 230, 507, 1045, 1185, 1629, 2816
BshNI GGYRCC 1 cut(s) 1832
BshVI ATCGAT 1 cut(s) 911
BsiEI CGRYCG 1 cut(s) 915
BsiHKAI GWGCWC 1 cut(s) 924
BsiHKCI CYCGRG 3 cut(s) 463, 836, 2159
BsiSI CCGG 5 cut(s) 19, 397, 1041, 1758, 2817
BslFI GGGAC 6 cut(s) 20, 296, 497, 603, 1175, 1301
BslI CCNNNNNNNGG 5 cut(s) 44, 145, 237, 1651, 1850
BsmAI GTCTC 9 cut(s) 249, 350, 394, 1020, 2025, 2081, 2620, 2657, 2703
BsmFI GGGAC 6 cut(s) 20, 296, 497, 603, 1175, 1301
BsmI GAATGC 1 cut(s) 959
BsnI GGCC 6 cut(s) 230, 507, 1045, 1185, 1629, 2816
Bso31I GGTCTC 3 cut(s) 249, 2657, 2703
BsoBI CYCGRG 3 cut(s) 463, 836, 2159
Bsp119I TTCGAA 1 cut(s) 631
Bsp1286I GDGCHC 1 cut(s) 924
Bsp13I TCCGGA 1 cut(s) 396
Bsp19I CCATGG 3 cut(s) 139, 2299, 2416
BspACI CCGC 5 cut(s) 16, 937, 1254, 2276, 2706
BspANI GGCC 6 cut(s) 230, 507, 1045, 1185, 1629, 2816
BspDI ATCGAT 1 cut(s) 911
BspEI TCCGGA 1 cut(s) 396
BspFNI CGCG 1 cut(s) 153
BspLI GGNNCC 6 cut(s) 192, 217, 355, 1114, 1289, 1834
BspMI ACCTGC 1 cut(s) 1668
BspOI GCTAGC 1 cut(s) 102
BspPI GGATC 4 cut(s) 1705, 2184, 2365, 2936
BspT104I TTCGAA 1 cut(s) 631
BspT107I GGYRCC 1 cut(s) 1832
BspTNI GGTCTC 3 cut(s) 249, 2657, 2703
BsrBI CCGCTC 1 cut(s) 1254
BsrDI GCAATG 4 cut(s) 571, 1029, 2239, 2501
BsrFI RCCGGY 1 cut(s) 18
BssAI RCCGGY 1 cut(s) 18
BssECI CCNNGG 8 cut(s) 139, 1649, 1903, 1988, 2299, 2383, 2416, 2647
BssHII GCGCGC 1 cut(s) 151
BssNAI GTATAC 1 cut(s) 2171
BssT1I CCWWGG 7 cut(s) 139, 1649, 1988, 2299, 2383, 2416, 2647
Bst1107I GTATAC 1 cut(s) 2171
Bst2UI CCWGG 1 cut(s) 2697
Bst4CI ACNGT 6 cut(s) 594, 614, 1275, 1328, 1795, 1907
Bst6I CTCTTC 1 cut(s) 906
BstAPI GCANNNNNTGC 1 cut(s) 273
BstBI TTCGAA 1 cut(s) 631
BstC8I GCNNGC 5 cut(s) 100, 153, 1577, 1621, 1665
BstDSI CCRYGG 4 cut(s) 139, 1903, 2299, 2416
BstEII GGTNACC 1 cut(s) 1205
BstF5I GGATG 8 cut(s) 11, 545, 719, 1116, 1566, 2496, 2910, 2952
BstFNI CGCG 1 cut(s) 153
BstHHI GCGC 4 cut(s) 153, 155, 2508, 2587
BstMAI GTCTC 9 cut(s) 249, 350, 394, 1020, 2025, 2081, 2620, 2657, 2703
BstMCI CGRYCG 1 cut(s) 915
BstNI CCWGG 1 cut(s) 2697
BstPI GGTNACC 1 cut(s) 1205
BstSCI CCNGG 2 cut(s) 1040, 2695
BstSFI CTRYAG 1 cut(s) 1732
BstUI CGCG 1 cut(s) 153
BstV2I GAAGAC 2 cut(s) 311, 2385
BstX2I RGATCY 5 cut(s) 1762, 1882, 2176, 2287, 2370
BstXI CCANNNNNNTGG 1 cut(s) 2272
BstYI RGATCY 5 cut(s) 1762, 1882, 2176, 2287, 2370
BstZ17I GTATAC 1 cut(s) 2171
Bsu15I ATCGAT 1 cut(s) 911
Bsu36I CCTNAGG 1 cut(s) 1283
BsuRI GGCC 6 cut(s) 230, 507, 1045, 1185, 1629, 2816
BsuTUI ATCGAT 1 cut(s) 911
BtgI CCRYGG 4 cut(s) 139, 1903, 2299, 2416
BtgZI GCGATG 2 cut(s) 2114, 2252
BtrI CACGTC 1 cut(s) 1512
BtsCI GGATG 8 cut(s) 11, 545, 719, 1116, 1566, 2496, 2910, 2952
BtsI GCAGTG 1 cut(s) 2779
BtsIMutI CAGTG 9 cut(s) 299, 670, 929, 1271, 1867, 2053, 2196, 2631, 2779
BveI ACCTGC 1 cut(s) 1668
Cac8I GCNNGC 5 cut(s) 100, 153, 1577, 1621, 1665
CaiI CAGNNNCTG 3 cut(s) 692, 977, 1265
CfoI GCGC 4 cut(s) 153, 155, 2508, 2587
Cfr10I RCCGGY 1 cut(s) 18
Cfr13I GGNCC 7 cut(s) 190, 968, 1043, 1184, 1288, 1519, 2539
ClaI ATCGAT 1 cut(s) 911
CseI GACGC 1 cut(s) 2020
Csp6I GTAC 6 cut(s) 1550, 1681, 1791, 2304, 2642, 2849
CspCI CAANNNNNGTGG 4 cut(s) 1090, 1125, 1810, 1845
CviQI GTAC 6 cut(s) 1550, 1681, 1791, 2304, 2642, 2849
DrdI GACNNNNNNGTC 1 cut(s) 2017
DseDI GACNNNNNNGTC 1 cut(s) 2017
EaeI YGGCCR 3 cut(s) 505, 1627, 2814
Eam1104I CTCTTC 1 cut(s) 906
EarI CTCTTC 1 cut(s) 906
Ecl136II GAGCTC 1 cut(s) 922
Eco130I CCWWGG 7 cut(s) 139, 1649, 1988, 2299, 2383, 2416, 2647
Eco147I AGGCCT 1 cut(s) 230
Eco24I GRGCYC 1 cut(s) 924
Eco31I GGTCTC 3 cut(s) 249, 2657, 2703
Eco32I GATATC 2 cut(s) 794, 2398
Eco47I GGWCC 5 cut(s) 190, 968, 1288, 1519, 2539
Eco53kI GAGCTC 1 cut(s) 922
Eco57I CTGAAG 1 cut(s) 1843
Eco81I CCTNAGG 1 cut(s) 1283
Eco88I CYCGRG 3 cut(s) 463, 836, 2159
Eco91I GGTNACC 1 cut(s) 1205
EcoICRI GAGCTC 1 cut(s) 922
EcoO109I RGGNCCY 1 cut(s) 1288
EcoO65I GGTNACC 1 cut(s) 1205
EcoRI GAATTC 3 cut(s) 755, 2432, 2792
EcoRII CCWGG 1 cut(s) 2695
EcoRV GATATC 2 cut(s) 794, 2398
EcoT14I CCWWGG 7 cut(s) 139, 1649, 1988, 2299, 2383, 2416, 2647
EcoT38I GRGCYC 1 cut(s) 924
ErhI CCWWGG 7 cut(s) 139, 1649, 1988, 2299, 2383, 2416, 2647
FalI AAGNNNNNCTT 6 cut(s) 164, 196, 1427, 1459, 2367, 2399
FaqI GGGAC 6 cut(s) 20, 296, 497, 603, 1175, 1301
FauI CCCGC 1 cut(s) 23
FbaI TGATCA 1 cut(s) 2910
FblI GTMKAC 1 cut(s) 2170
FokI GGATG 6 cut(s) 532, 706, 1103, 1573, 2483, 2917
FriOI GRGCYC 1 cut(s) 924
GlaI GCGC 4 cut(s) 152, 154, 2507, 2586
GsaI CCCAGC 3 cut(s) 1680, 2750, 2904
GsuI CTGGAG 3 cut(s) 349, 2000, 2639
HaeIII GGCC 6 cut(s) 230, 507, 1045, 1185, 1629, 2816
HapII CCGG 5 cut(s) 19, 397, 1041, 1758, 2817
HgaI GACGC 1 cut(s) 2020
HhaI GCGC 4 cut(s) 153, 155, 2508, 2587
Hin6I GCGC 4 cut(s) 151, 153, 2506, 2585
HinP1I GCGC 4 cut(s) 151, 153, 2506, 2585
HincII GTYRAC 1 cut(s) 1657
HindII GTYRAC 1 cut(s) 1657
HindIII AAGCTT 2 cut(s) 1436, 1665
HinfI GANTC 8 cut(s) 406, 457, 695, 926, 1268, 1368, 1737, 2425
HpaI GTTAAC 1 cut(s) 1657
HpaII CCGG 5 cut(s) 19, 397, 1041, 1758, 2817
HphI GGTGA 5 cut(s) 155, 596, 1692, 1761, 2213
Hpy166II GTNNAC 3 cut(s) 190, 1657, 2171
Hpy188I TCNGA 9 cut(s) 520, 878, 917, 1107, 1890, 2215, 2287, 2292, 2933
Hpy8I GTNNAC 3 cut(s) 190, 1657, 2171
HpyCH4III ACNGT 6 cut(s) 594, 614, 1275, 1328, 1795, 1907
HpyCH4IV ACGT 2 cut(s) 1511, 2895
HpySE526I ACGT 2 cut(s) 1511, 2895
HspAI GCGC 4 cut(s) 151, 153, 2506, 2585
Kpn2I TCCGGA 1 cut(s) 396
Ksp22I TGATCA 1 cut(s) 2910
KspAI GTTAAC 1 cut(s) 1657
LmnI GCTCC 5 cut(s) 95, 107, 148, 359, 2019
LweI GCATC 3 cut(s) 2091, 2505, 2773
MaeII ACGT 2 cut(s) 1511, 2895
MbiI CCGCTC 1 cut(s) 1254
MfeI CAATTG 1 cut(s) 1970
MflI RGATCY 5 cut(s) 1762, 1882, 2176, 2287, 2370
MhlI GDGCHC 1 cut(s) 924
MlsI TGGCCA 2 cut(s) 507, 1629
MluNI TGGCCA 2 cut(s) 507, 1629
MlyI GAGTC 3 cut(s) 415, 920, 1362
MmeI TCCRAC 2 cut(s) 1361, 2803
Mox20I TGGCCA 2 cut(s) 507, 1629
MroI TCCGGA 1 cut(s) 396
MroXI GAANNNNTTC 1 cut(s) 654
MscI TGGCCA 2 cut(s) 507, 1629
MslI CAYNNNNRTG 3 cut(s) 663, 1777, 2270
Msp20I TGGCCA 2 cut(s) 507, 1629
MspI CCGG 5 cut(s) 19, 397, 1041, 1758, 2817
MspR9I CCNGG 2 cut(s) 1042, 2697
MunI CAATTG 1 cut(s) 1970
Mva1269I GAATGC 1 cut(s) 959
MvaI CCWGG 1 cut(s) 2697
MvnI CGCG 1 cut(s) 153
NciI CCSGG 1 cut(s) 1042
NcoI CCATGG 3 cut(s) 139, 2299, 2416
NheI GCTAGC 1 cut(s) 98
NlaIV GGNNCC 6 cut(s) 192, 217, 355, 1114, 1289, 1834
NmuCI GTSAC 6 cut(s) 665, 870, 1862, 1992, 2329, 2729
NspV TTCGAA 1 cut(s) 631
PaeR7I CTCGAG 1 cut(s) 463
PauI GCGCGC 1 cut(s) 151
PceI AGGCCT 1 cut(s) 230
PcsI WCGNNNNNNNCGW 1 cut(s) 921
PctI GAATGC 1 cut(s) 959
PdmI GAANNNNTTC 1 cut(s) 654
PfeI GAWTC 5 cut(s) 457, 695, 1268, 1737, 2425
PflFI GACNNNGTC 1 cut(s) 405
PfoI TCCNGGA 1 cut(s) 2695
Ple19I CGATCG 1 cut(s) 915
PleI GAGTC 3 cut(s) 414, 920, 1362
PpsI GAGTC 3 cut(s) 414, 920, 1362
PpuMI RGGWCCY 1 cut(s) 1288
PsiI TTATAA 1 cut(s) 1965
Psp124BI GAGCTC 1 cut(s) 924
Psp5II RGGWCCY 1 cut(s) 1288
Psp6I CCWGG 1 cut(s) 2695
PspEI GGTNACC 1 cut(s) 1205
PspFI CCCAGC 3 cut(s) 1676, 2746, 2900
PspGI CCWGG 1 cut(s) 2695
PspN4I GGNNCC 6 cut(s) 192, 217, 355, 1114, 1289, 1834
PspPI GGNCC 7 cut(s) 190, 968, 1043, 1184, 1288, 1519, 2539
PspPPI RGGWCCY 1 cut(s) 1288
PstNI CAGNNNCTG 3 cut(s) 692, 977, 1265
PsuI RGATCY 5 cut(s) 1762, 1882, 2176, 2287, 2370
PsyI GACNNNGTC 1 cut(s) 405
PteI GCGCGC 1 cut(s) 151
PvuI CGATCG 1 cut(s) 915
RsaI GTAC 6 cut(s) 1551, 1682, 1792, 2305, 2643, 2850
RsaNI GTAC 6 cut(s) 1550, 1681, 1791, 2304, 2642, 2849
RseI CAYNNNNRTG 3 cut(s) 663, 1777, 2270
SacI GAGCTC 1 cut(s) 924
Sau96I GGNCC 7 cut(s) 190, 968, 1043, 1184, 1288, 1519, 2539
SchI GAGTC 3 cut(s) 415, 920, 1362
ScrFI CCNGG 2 cut(s) 1042, 2697
SduI GDGCHC 1 cut(s) 924
SfaNI GCATC 3 cut(s) 2091, 2505, 2773
SfcI CTRYAG 1 cut(s) 1732
Sfr274I CTCGAG 1 cut(s) 463
SfuI TTCGAA 1 cut(s) 631
SgrAI CRCCGGYG 1 cut(s) 18
SinI GGWCC 5 cut(s) 190, 968, 1288, 1519, 2539
SlaI CTCGAG 1 cut(s) 463
SmiMI CAYNNNNRTG 3 cut(s) 663, 1777, 2270
SmlI CTYRAG 2 cut(s) 463, 2401
SmoI CTYRAG 2 cut(s) 463, 2401
SpeI ACTAGT 1 cut(s) 641
SseBI AGGCCT 1 cut(s) 230
SsiI CCGC 5 cut(s) 16, 937, 1254, 2276, 2706
SspI AATATT 2 cut(s) 43, 1723
SstI GAGCTC 1 cut(s) 924
StuI AGGCCT 1 cut(s) 230
StyD4I CCNGG 2 cut(s) 1040, 2695
StyI CCWWGG 7 cut(s) 139, 1649, 1988, 2299, 2383, 2416, 2647
TaaI ACNGT 6 cut(s) 594, 614, 1275, 1328, 1795, 1907
TaiI ACGT 2 cut(s) 1514, 2898
TaqI TCGA 8 cut(s) 464, 631, 911, 924, 1092, 1371, 2366, 2796
TfiI GAWTC 5 cut(s) 457, 695, 1268, 1737, 2425
TscAI CASTG 9 cut(s) 299, 670, 936, 1278, 1867, 2053, 2203, 2638, 2779
TseFI GTSAC 6 cut(s) 665, 870, 1862, 1992, 2329, 2729
Tsp45I GTSAC 6 cut(s) 665, 870, 1862, 1992, 2329, 2729
TspGWI ACGGA 1 cut(s) 1348
TspRI CASTG 9 cut(s) 299, 670, 936, 1278, 1867, 2053, 2203, 2638, 2779
Tth111I GACNNNGTC 1 cut(s) 405
VpaK11BI GGWCC 5 cut(s) 190, 968, 1288, 1519, 2539
XcmI CCANNNNNNNNNTGG 1 cut(s) 2381
XhoI CTCGAG 1 cut(s) 463
XmiI GTMKAC 1 cut(s) 2170
XmnI GAANNNNTTC 1 cut(s) 654
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.