Rroxscaffold_4G00311240

receptor-like protein 12

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
33541514 .. 33558312
16799 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00311240.1

Sequence Viewer

Length: 1908 bp
ATGTGGGCTGTGATCATAGCATTAGAGAAGAACTGGTGCGCGTTTGGACAAAGGAAATTATGGAAGTGTACGTTTGCTAAGAGGAAGTCCCACTCGTTGAAGTTGGCTGGAGATGGTTATCAGCCTTATCTCATATCTCCCGAAAAAGAGGGCGTTTTGGAGCATACCTTTGCTAATAGAGTTGTTTGTGTGTGTGTCACAAGGACGTTGACCCATAAAAGCATAACCTATTCTTCATTAGAGGGTCTGAGGGTGGAACATTGGCACACATCCATGTGGGCTGTGATGATAGCATTAGAGAGGAACTGGAAGGGGGTTTGGACGAAAGAAAATGGAGGTTGTGCCGCATGCTTCACATTGCATTCCGTCTTTAGAGGGCGTTTTGGAGCATGCACGCACGCACTAGATGCTAGATTTTCATACATATCACTGTTGAACTCTCAGCTGGAGCTGAATTTGAAGGTTCTTGATGTGAGCAACAACCCTGCTCTCACGGGGTATTTTCCTGATGACTATAGTGGAAGTAGTCCTGATCTCATGTCACTCAAACTCTCGTACACTAATTTTTTCATTAACTTACCTTCTTTGATAGATAGGTTTCATTCACTGAAAGAGTTGGATGTGAGTTCATGCAATATTTCAGAAGGTCCAGTACCATTTTCACTTGGTAATCTTAGGGATCTCATCTATTTGGACCTTTCAGATAATAAGTTTAATGGTCAAATCCCTACTATGGTTCAATCCCCCCAGTCCTTGTTCAGTCTCATGAATCTTCAAACCCTTTATCTACATCATAATAATTTGAGTGGTACAGTAGAGTTCCAGAAGTTTCTTATCCTACAAAACCTCACCTCTCTAGATCTGTCTAATAATAATTTGGAATTGCTCGCAGAATCCAGATTTTTGAATAATGCAAGTACTGTACTTCCAAAGTTTGAGTATTTAGGTTTGGGCGGGTGCAACATAAGAGAGTTCCCATATTTTCTAAGATCTCAGGAAGCATTGTATTCGTTAGATCTCTCTAGCAACAAATTGCAAGGCCAAGTACCAAAATGGATGTGGAACATAAGCACTCAAACTCTGTCTTACATTAACATTTCTCATAACTTCCTGTCAGGTTTTGAGAAAACTCCAGCAGTCCTTCCCTTGGGGATTTGGTCACTCAATCTCTCCAATAACATTCTCACCGGTCACATCCCATCATCCTTGAGTAACTTATCAAGGCTTGAATCCTTGGATCTTTCACATAACAAGCTCTCTGGTGAGATTCCTCAGCAACTGGCACAACTTGATTGTCTCTCAAAGTTCAATGTCTCTCACAACAATCTCACAGGCCCTGTACCACGGGGAACCCACTTCACTACATTTGACAGCACTTCATATCTAGGAAACCAAGGATTGTGCGGAGATTTCTTGCCAAAGAAATGTGCAAATTCGAAGGGCACTCAACTTCTACCTTCAACATCAGAAGATAATGACTCGGGCTCTGGAATTGAATTGGATTGGAAATTTGTTGTGGCAGGGCTAGGGAGTGGCTTGCTGGTGGGAGTGGTTCTTGCAGACTTTGTGATTACCAAGTGGAATGTGTGGTTCATTGAGATTGTTGCATTTCCCTTGAACAGATTGGGAGCCAATTACGGCGTCGTTTCAAGCCCCAAAATCACATTCAAGACATTTATTACCATTCCGAAATTGGTTCAGAATCACGAGTATAGATTCGGGCGGCGCCGAAGTTGGTTCAGAATCACGAGTAAGAGAAATGATTTAGAGACTGCACACCAGGTGCTCGACGAAATGCCTGCCATGGGATTTGTGCCCATTTTGGGGAAGCTGGTTGAGGCCATTAAGGTCATGGATGAGATGGAGGATAATGGGGTTGGCGCCAATGAGGTTATGAGTTTTGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

635

Amino Acids

71.15

Weight (kDa)

6.98

Isoelectric Point (pI)

42.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 153 - 367 2e-08 Leucine-rich repeat region
LRR_8 PF13855 387 - 443 1.5e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1725, 1880
AccII CGCG 1 cut(s) 41
AciI CCGC 4 cut(s) 345, 954, 1404, 1723
AclWI GGATC 2 cut(s) 687, 1245
AcsI RAATTY 3 cut(s) 454, 1432, 1508
AcyI GRCGYC 3 cut(s) 1641, 1726, 1881
AdeI CACNNNGTG 1 cut(s) 1783
AfaI GTAC 8 cut(s) 70, 557, 654, 811, 919, 924, 1047, 1341
AfiI CCNNNNNNNGG 5 cut(s) 733, 1147, 1805, 1823, 1824
AgeI ACCGGT 1 cut(s) 1187
AjnI CCWGG 1 cut(s) 1779
AjuI GAANNNNNNNTTGG 2 cut(s) 1649, 1681
AluBI AGCT 4 cut(s) 445, 451, 1255, 1831
AluI AGCT 4 cut(s) 445, 451, 1255, 1831
Alw21I GWGCWC 1 cut(s) 1788
Alw26I GTCTC 4 cut(s) 767, 1301, 1318, 1763
AlwI GGATC 2 cut(s) 687, 1245
AlwNI CAGNNNCTG 2 cut(s) 1279, 1337
Ama87I CYCGRG 1 cut(s) 1480
AoxI GGCC 3 cut(s) 1039, 1333, 1839
ApoI RAATTY 3 cut(s) 454, 1432, 1508
AsiGI ACCGGT 1 cut(s) 1187
AspLEI GCGC 3 cut(s) 41, 1728, 1883
AspS9I GGNCC 3 cut(s) 647, 694, 1334
AsuHPI GGTGA 3 cut(s) 841, 1177, 1274
AsuII TTCGAA 1 cut(s) 1436
AvaI CYCGRG 1 cut(s) 1480
AvaII GGWCC 2 cut(s) 647, 694
BaeGI GKGCMC 2 cut(s) 1445, 1818
BanI GGYRCC 2 cut(s) 1725, 1880
BanII GRGCYC 1 cut(s) 1487
BarI GAAGNNNNNNTAC 2 cut(s) 636, 668
BauI CACGAG 2 cut(s) 1706, 1747
Bbv12I GWGCWC 1 cut(s) 1788
BbvCI CCTCAGC 1 cut(s) 1272
BccI CCATC 3 cut(s) 107, 1207, 1855
BceAI ACGGC 1 cut(s) 1654
BcgI CGANNNNNNTGC 4 cut(s) 990, 1024, 1781, 1815
BciT130I CCWGG 1 cut(s) 1781
BclI TGATCA 1 cut(s) 12
BcoDI GTCTC 4 cut(s) 767, 1301, 1318, 1763
BfaI CTAG 6 cut(s) 404, 411, 857, 1023, 1385, 1526
BfmI CTRYAG 1 cut(s) 514
BfoI RGCGCY 2 cut(s) 1729, 1884
BglII AGATCT 3 cut(s) 859, 989, 1015
BisI GCNGC 2 cut(s) 345, 1724
BlsI GCNGC 2 cut(s) 346, 1725
BmcAI AGTACT 1 cut(s) 919
Bme1390I CCNGG 1 cut(s) 1781
Bme18I GGWCC 2 cut(s) 647, 694
BmeT110I CYCGRG 1 cut(s) 1480
BmgT120I GGNCC 3 cut(s) 647, 694, 1334
BmiI GGNNCC 4 cut(s) 1351, 1630, 1727, 1882
BmrFI CCNGG 1 cut(s) 1781
BmrI ACTGGG 1 cut(s) 742
BmsI GCATC 1 cut(s) 397
BmuI ACTGGG 1 cut(s) 742
BpmI CTGGAG 3 cut(s) 129, 467, 1116
Bpu10I CCTNAGC 1 cut(s) 1272
Bpu14I TTCGAA 1 cut(s) 1436
BpuEI CTTGAG 1 cut(s) 1228
BsaBI GATNNNNATC 1 cut(s) 117
BsaHI GRCGYC 3 cut(s) 1641, 1726, 1881
BsaJI CCNNGG 5 cut(s) 1146, 1233, 1343, 1393, 1803
BsaWI WCCGGW 1 cut(s) 1187
Bsc4I CCNNNNNNNGG 5 cut(s) 733, 1147, 1805, 1823, 1824
Bse118I RCCGGY 1 cut(s) 1187
Bse1I ACTGG 5 cut(s) 38, 311, 650, 748, 1284
Bse3DI GCAATG 1 cut(s) 356
Bse8I GATNNNNATC 1 cut(s) 117
BseBI CCWGG 1 cut(s) 1781
BseDI CCNNGG 5 cut(s) 1146, 1233, 1343, 1393, 1803
BseGI GGATG 6 cut(s) 269, 625, 1062, 1194, 1202, 1861
BseJI GATNNNNATC 1 cut(s) 117
BseLI CCNNNNNNNGG 5 cut(s) 733, 1147, 1805, 1823, 1824
BseMI GCAATG 1 cut(s) 356
BseMII CTCAG 4 cut(s) 239, 455, 1007, 1286
BseNI ACTGG 5 cut(s) 38, 311, 650, 748, 1284
BseSI GKGCMC 2 cut(s) 1445, 1818
BsgI GTGCAG 1 cut(s) 1758
Bsh1236I CGCG 1 cut(s) 41
BshFI GGCC 3 cut(s) 1041, 1335, 1841
BshNI GGYRCC 2 cut(s) 1725, 1880
BshTI ACCGGT 1 cut(s) 1187
BsiHKAI GWGCWC 1 cut(s) 1788
BsiHKCI CYCGRG 1 cut(s) 1480
BsiSI CCGG 1 cut(s) 1188
BslFI GGGAC 1 cut(s) 73
BslI CCNNNNNNNGG 5 cut(s) 733, 1147, 1805, 1823, 1824
BsmAI GTCTC 4 cut(s) 767, 1301, 1318, 1763
BsmFI GGGAC 1 cut(s) 73
BsmI GAATGC 1 cut(s) 361
BsnI GGCC 3 cut(s) 1041, 1335, 1841
BsoBI CYCGRG 1 cut(s) 1480
Bsp119I TTCGAA 1 cut(s) 1436
Bsp1286I GDGCHC 4 cut(s) 1445, 1487, 1788, 1818
Bsp143I GATC 7 cut(s) 12, 532, 679, 859, 989, 1015, 1237
Bsp19I CCATGG 1 cut(s) 1803
BspACI CCGC 4 cut(s) 345, 954, 1404, 1723
BspANI GGCC 3 cut(s) 1041, 1335, 1841
BspCNI CTCAG 4 cut(s) 240, 454, 1006, 1285
BspFNI CGCG 1 cut(s) 41
BspHI TCATGA 1 cut(s) 765
BspLI GGNNCC 4 cut(s) 1351, 1630, 1727, 1882
BspPI GGATC 2 cut(s) 687, 1245
BspT104I TTCGAA 1 cut(s) 1436
BspT107I GGYRCC 2 cut(s) 1725, 1880
BsrDI GCAATG 1 cut(s) 356
BsrFI RCCGGY 1 cut(s) 1187
BsrI ACTGG 5 cut(s) 38, 311, 650, 748, 1284
BssAI RCCGGY 1 cut(s) 1187
BssECI CCNNGG 5 cut(s) 1146, 1233, 1343, 1393, 1803
BssMI GATC 7 cut(s) 12, 532, 679, 859, 989, 1015, 1237
BssNI GRCGYC 3 cut(s) 1641, 1726, 1881
BssSI CACGAG 2 cut(s) 1706, 1747
BssT1I CCWWGG 4 cut(s) 1146, 1233, 1393, 1803
Bst2BI CACGAG 2 cut(s) 1706, 1747
Bst2UI CCWGG 1 cut(s) 1781
Bst4CI ACNGT 3 cut(s) 432, 814, 922
BstACI GRCGYC 3 cut(s) 1641, 1726, 1881
BstAPI GCANNNNNTGC 1 cut(s) 407
BstBI TTCGAA 1 cut(s) 1436
BstC8I GCNNGC 7 cut(s) 349, 391, 395, 399, 888, 1538, 1800
BstDEI CTNAG 7 cut(s) 78, 248, 441, 674, 986, 993, 1272
BstDSI CCRYGG 2 cut(s) 1343, 1803
BstF5I GGATG 6 cut(s) 269, 625, 1062, 1194, 1202, 1861
BstFNI CGCG 1 cut(s) 41
BstH2I RGCGCY 2 cut(s) 1729, 1884
BstHHI GCGC 3 cut(s) 41, 1728, 1883
BstKTI GATC 7 cut(s) 15, 535, 682, 862, 992, 1018, 1240
BstMAI GTCTC 4 cut(s) 767, 1301, 1318, 1763
BstMBI GATC 7 cut(s) 12, 532, 679, 859, 989, 1015, 1237
BstMWI GCNNNNNNNGC 1 cut(s) 407
BstNI CCWGG 1 cut(s) 1781
BstNSI RCATGY 2 cut(s) 351, 393
BstSCI CCNGG 1 cut(s) 1779
BstSFI CTRYAG 1 cut(s) 514
BstSLI GKGCMC 2 cut(s) 1445, 1818
BstUI CGCG 1 cut(s) 41
BstX2I RGATCY 5 cut(s) 679, 859, 989, 1015, 1237
BstYI RGATCY 5 cut(s) 679, 859, 989, 1015, 1237
BsuRI GGCC 3 cut(s) 1041, 1335, 1841
BtgI CCRYGG 2 cut(s) 1343, 1803
BtsCI GGATG 6 cut(s) 269, 625, 1062, 1194, 1202, 1861
BtsIMutI CAGTG 2 cut(s) 428, 605
Cac8I GCNNGC 7 cut(s) 349, 391, 395, 399, 888, 1538, 1800
CaiI CAGNNNCTG 2 cut(s) 1279, 1337
CciI TCATGA 1 cut(s) 765
CfoI GCGC 3 cut(s) 41, 1728, 1883
Cfr10I RCCGGY 1 cut(s) 1187
Cfr13I GGNCC 3 cut(s) 647, 694, 1334
CseI GACGC 1 cut(s) 1630
CsiI ACCWGGT 1 cut(s) 1779
Csp6I GTAC 8 cut(s) 69, 556, 653, 810, 918, 923, 1046, 1340
CspAI ACCGGT 1 cut(s) 1187
CviAII CATG 8 cut(s) 274, 348, 390, 538, 630, 766, 1804, 1852
CviQI GTAC 8 cut(s) 69, 556, 653, 810, 918, 923, 1046, 1340
DdeI CTNAG 7 cut(s) 78, 248, 441, 674, 986, 993, 1272
DinI GGCGCC 2 cut(s) 1727, 1882
DpnI GATC 7 cut(s) 14, 534, 681, 861, 991, 1017, 1239
DpnII GATC 7 cut(s) 12, 532, 679, 859, 989, 1015, 1237
DraIII CACNNNGTG 1 cut(s) 1783
Eco130I CCWWGG 4 cut(s) 1146, 1233, 1393, 1803
Eco24I GRGCYC 1 cut(s) 1487
Eco47I GGWCC 2 cut(s) 647, 694
Eco88I CYCGRG 1 cut(s) 1480
EcoO109I RGGNCCY 1 cut(s) 1334
EcoRII CCWGG 1 cut(s) 1779
EcoT14I CCWWGG 4 cut(s) 1146, 1233, 1393, 1803
EcoT38I GRGCYC 1 cut(s) 1487
EgeI GGCGCC 2 cut(s) 1727, 1882
EheI GGCGCC 2 cut(s) 1727, 1882
ErhI CCWWGG 4 cut(s) 1146, 1233, 1393, 1803
FaeI CATG 8 cut(s) 277, 351, 393, 541, 633, 769, 1807, 1855
FaqI GGGAC 1 cut(s) 73
FatI CATG 8 cut(s) 273, 347, 389, 537, 629, 765, 1803, 1851
FauI CCCGC 1 cut(s) 947
FbaI TGATCA 1 cut(s) 12
Fnu4HI GCNGC 2 cut(s) 345, 1724
FokI GGATG 6 cut(s) 256, 632, 1069, 1181, 1189, 1868
FriOI GRGCYC 1 cut(s) 1487
Fsp4HI GCNGC 2 cut(s) 345, 1724
FspBI CTAG 6 cut(s) 404, 411, 857, 1023, 1385, 1526
GlaI GCGC 3 cut(s) 40, 1727, 1882
GluI GCNGC 2 cut(s) 345, 1724
GsuI CTGGAG 3 cut(s) 129, 467, 1116
HaeII RGCGCY 2 cut(s) 1729, 1884
HaeIII GGCC 3 cut(s) 1041, 1335, 1841
HapII CCGG 1 cut(s) 1188
HgaI GACGC 1 cut(s) 1630
HhaI GCGC 3 cut(s) 41, 1728, 1883
Hin1I GRCGYC 3 cut(s) 1641, 1726, 1881
Hin1II CATG 8 cut(s) 277, 351, 393, 541, 633, 769, 1807, 1855
Hin6I GCGC 3 cut(s) 39, 1726, 1881
HinP1I GCGC 3 cut(s) 39, 1726, 1881
HincII GTYRAC 1 cut(s) 210
HindII GTYRAC 1 cut(s) 210
HinfI GANTC 8 cut(s) 769, 893, 1229, 1267, 1478, 1702, 1716, 1743
HpaII CCGG 1 cut(s) 1188
HphI GGTGA 3 cut(s) 841, 1177, 1274
Hpy166II GTNNAC 3 cut(s) 69, 210, 558
Hpy188I TCNGA 7 cut(s) 249, 643, 703, 1468, 1689, 1701, 1742
Hpy8I GTNNAC 3 cut(s) 69, 210, 558
Hpy99I CGWCG 2 cut(s) 1646, 1793
HpyAV CCTTC 7 cut(s) 304, 454, 591, 638, 1151, 1432, 1467
HpyCH4III ACNGT 3 cut(s) 432, 814, 922
HpyCH4IV ACGT 2 cut(s) 71, 206
HpyF10VI GCNNNNNNNGC 1 cut(s) 407
HpyF3I CTNAG 7 cut(s) 78, 248, 441, 674, 986, 993, 1272
HpySE526I ACGT 2 cut(s) 71, 206
Hsp92I GRCGYC 3 cut(s) 1641, 1726, 1881
Hsp92II CATG 8 cut(s) 277, 351, 393, 541, 633, 769, 1807, 1855
HspAI GCGC 3 cut(s) 39, 1726, 1881
KasI GGCGCC 2 cut(s) 1725, 1880
Ksp22I TGATCA 1 cut(s) 12
Kzo9I GATC 7 cut(s) 12, 532, 679, 859, 989, 1015, 1237
LmnI GCTCC 4 cut(s) 160, 386, 448, 1628
LweI GCATC 1 cut(s) 397
MabI ACCWGGT 1 cut(s) 1779
MaeI CTAG 6 cut(s) 404, 411, 857, 1023, 1385, 1526
MaeII ACGT 2 cut(s) 71, 206
MaeIII GTNAC 5 cut(s) 196, 540, 1158, 1190, 1211
MalI GATC 7 cut(s) 14, 534, 681, 861, 991, 1017, 1239
MboI GATC 7 cut(s) 12, 532, 679, 859, 989, 1015, 1237
MboII GAAGA 4 cut(s) 40, 225, 764, 1481
MflI RGATCY 5 cut(s) 679, 859, 989, 1015, 1237
MhlI GDGCHC 4 cut(s) 1445, 1487, 1788, 1818
Mly113I GGCGCC 2 cut(s) 1726, 1881
MlyI GAGTC 1 cut(s) 1472
MmeI TCCRAC 1 cut(s) 597
MseI TTAA 4 cut(s) 573, 714, 1092, 1845
MslI CAYNNNNRTG 2 cut(s) 272, 274
MspA1I CMGCKG 1 cut(s) 445
MspI CCGG 1 cut(s) 1188
MspR9I CCNGG 1 cut(s) 1781
Mva1269I GAATGC 1 cut(s) 361
MvaI CCWGG 1 cut(s) 1781
MvnI CGCG 1 cut(s) 41
MwoI GCNNNNNNNGC 1 cut(s) 407
NarI GGCGCC 2 cut(s) 1726, 1881
NcoI CCATGG 1 cut(s) 1803
NdeII GATC 7 cut(s) 12, 532, 679, 859, 989, 1015, 1237
NlaIII CATG 8 cut(s) 277, 351, 393, 541, 633, 769, 1807, 1855
NlaIV GGNNCC 4 cut(s) 1351, 1630, 1727, 1882
NmuCI GTSAC 4 cut(s) 196, 540, 1158, 1190
NspI RCATGY 2 cut(s) 351, 393
NspV TTCGAA 1 cut(s) 1436
PaeI GCATGC 2 cut(s) 351, 393
PagI TCATGA 1 cut(s) 765
PctI GAATGC 1 cut(s) 361
PfeI GAWTC 7 cut(s) 769, 893, 1229, 1267, 1702, 1716, 1743
PinAI ACCGGT 1 cut(s) 1187
PkrI GCNGC 2 cut(s) 346, 1725
PleI GAGTC 1 cut(s) 1472
PluTI GGCGCC 2 cut(s) 1729, 1884
PpsI GAGTC 1 cut(s) 1472
Psp6I CCWGG 1 cut(s) 1779
PspGI CCWGG 1 cut(s) 1779
PspN4I GGNNCC 4 cut(s) 1351, 1630, 1727, 1882
PspPI GGNCC 3 cut(s) 647, 694, 1334
PstNI CAGNNNCTG 2 cut(s) 1279, 1337
PsuI RGATCY 5 cut(s) 679, 859, 989, 1015, 1237
PvuII CAGCTG 1 cut(s) 445
RsaI GTAC 8 cut(s) 70, 557, 654, 811, 919, 924, 1047, 1341
RsaNI GTAC 8 cut(s) 69, 556, 653, 810, 918, 923, 1046, 1340
RseI CAYNNNNRTG 2 cut(s) 272, 274
SaqAI TTAA 4 cut(s) 573, 714, 1092, 1845
SatI GCNGC 2 cut(s) 345, 1724
Sau3AI GATC 7 cut(s) 12, 532, 679, 859, 989, 1015, 1237
Sau96I GGNCC 3 cut(s) 647, 694, 1334
ScaI AGTACT 1 cut(s) 919
SchI GAGTC 1 cut(s) 1472
ScrFI CCNGG 1 cut(s) 1781
SduI GDGCHC 4 cut(s) 1445, 1487, 1788, 1818
SexAI ACCWGGT 1 cut(s) 1779
SfaNI GCATC 1 cut(s) 397
SfcI CTRYAG 1 cut(s) 514
SfoI GGCGCC 2 cut(s) 1727, 1882
SfuI TTCGAA 1 cut(s) 1436
SinI GGWCC 2 cut(s) 647, 694
SmiMI CAYNNNNRTG 2 cut(s) 272, 274
SmlI CTYRAG 1 cut(s) 1207
SmoI CTYRAG 1 cut(s) 1207
SphI GCATGC 2 cut(s) 351, 393
SsiI CCGC 4 cut(s) 345, 954, 1404, 1723
SspDI GGCGCC 2 cut(s) 1725, 1880
SspI AATATT 1 cut(s) 637
SspMI CTAG 6 cut(s) 404, 411, 857, 1023, 1385, 1526
StyD4I CCNGG 1 cut(s) 1779
StyI CCWWGG 4 cut(s) 1146, 1233, 1393, 1803
TaaI ACNGT 3 cut(s) 432, 814, 922
TaiI ACGT 2 cut(s) 74, 209
TaqI TCGA 2 cut(s) 1436, 1788
TatI WGTACW 2 cut(s) 917, 922
TauI GCSGC 2 cut(s) 347, 1726
TfiI GAWTC 7 cut(s) 769, 893, 1229, 1267, 1702, 1716, 1743
Tru1I TTAA 4 cut(s) 573, 714, 1092, 1845
Tru9I TTAA 4 cut(s) 573, 714, 1092, 1845
TscAI CASTG 2 cut(s) 435, 612
TseFI GTSAC 4 cut(s) 196, 540, 1158, 1190
Tsp45I GTSAC 4 cut(s) 196, 540, 1158, 1190
TspDTI ATGAA 8 cut(s) 225, 408, 559, 590, 618, 782, 1368, 1582
TspGWI ACGGA 1 cut(s) 355
TspRI CASTG 2 cut(s) 435, 612
VpaK11BI GGWCC 2 cut(s) 647, 694
XapI RAATTY 3 cut(s) 454, 1432, 1508
XbaI TCTAGA 1 cut(s) 856
XceI RCATGY 2 cut(s) 351, 393
XcmI CCANNNNNNNNNTGG 3 cut(s) 1056, 1690, 1849
XspI CTAG 6 cut(s) 404, 411, 857, 1023, 1385, 1526
ZrmI AGTACT 1 cut(s) 919
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.