regulation of response to stimulus
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 537, 1718 |
| AccBSI | CCGCTC | 1 cut(s) | 1447 |
| AccII | CGCG | 1 cut(s) | 2465 |
| AcsI | RAATTY | 7 cut(s) | 552, 647, 1283, 1381, 1566, 1832, 2145 |
| AcuI | CTGAAG | 2 cut(s) | 114, 1540 |
| AfaI | GTAC | 4 cut(s) | 752, 792, 968, 2327 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 95, 191, 951, 1125, 1862 |
| AflII | CTTAAG | 4 cut(s) | 1072, 1399, 1787, 2240 |
| AflIII | ACRYGT | 1 cut(s) | 2334 |
| AjnI | CCWGG | 2 cut(s) | 100, 1173 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2436, 2468 |
| Alw21I | GWGCWC | 3 cut(s) | 477, 1035, 1322 |
| Alw26I | GTCTC | 6 cut(s) | 61, 390, 1082, 1716, 2168, 2343 |
| AoxI | GGCC | 1 cut(s) | 2212 |
| ApeKI | GCWGC | 1 cut(s) | 1885 |
| ApoI | RAATTY | 7 cut(s) | 552, 647, 1283, 1381, 1566, 1832, 2145 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 657, 689, 1466, 1498 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 767 |
| AspA2I | CCTAGG | 1 cut(s) | 970 |
| AspLEI | GCGC | 1 cut(s) | 2467 |
| AspS9I | GGNCC | 5 cut(s) | 98, 113, 1750, 1841, 1865 |
| AsuHPI | GGTGA | 6 cut(s) | 322, 616, 1133, 2021, 2026, 2369 |
| AsuII | TTCGAA | 1 cut(s) | 2406 |
| AvaII | GGWCC | 5 cut(s) | 98, 113, 1750, 1841, 1865 |
| AvrII | CCTAGG | 1 cut(s) | 970 |
| BaeGI | GKGCMC | 1 cut(s) | 1432 |
| BanII | GRGCYC | 3 cut(s) | 477, 1035, 1322 |
| BauI | CACGAG | 1 cut(s) | 162 |
| BbsI | GAAGAC | 2 cut(s) | 773, 1216 |
| Bbv12I | GWGCWC | 3 cut(s) | 477, 1035, 1322 |
| BbvCI | CCTCAGC | 1 cut(s) | 2104 |
| BbvI | GCAGC | 1 cut(s) | 1872 |
| BccI | CCATC | 1 cut(s) | 1174 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2396, 2430 |
| BciT130I | CCWGG | 2 cut(s) | 102, 1175 |
| BciVI | GTATCC | 3 cut(s) | 1402, 1645, 1884 |
| BcoDI | GTCTC | 6 cut(s) | 61, 390, 1082, 1716, 2168, 2343 |
| BfaI | CTAG | 8 cut(s) | 668, 956, 971, 998, 1140, 2258, 2303, 2615 |
| BfmI | CTRYAG | 2 cut(s) | 1733, 2049 |
| BfrI | CTTAAG | 4 cut(s) | 1072, 1399, 1787, 2240 |
| BfuI | GTATCC | 3 cut(s) | 1402, 1645, 1884 |
| BglII | AGATCT | 2 cut(s) | 1395, 1981 |
| BisI | GCNGC | 1 cut(s) | 1886 |
| BlnI | CCTAGG | 1 cut(s) | 970 |
| BlpI | GCTNAGC | 1 cut(s) | 1726 |
| BlsI | GCNGC | 1 cut(s) | 1887 |
| Bme1390I | CCNGG | 2 cut(s) | 102, 1175 |
| Bme18I | GGWCC | 5 cut(s) | 98, 113, 1750, 1841, 1865 |
| BmgT120I | GGNCC | 5 cut(s) | 98, 113, 1750, 1841, 1865 |
| BmiI | GGNNCC | 2 cut(s) | 115, 1304 |
| BmrFI | CCNGG | 2 cut(s) | 102, 1175 |
| BmrI | ACTGGG | 2 cut(s) | 730, 2394 |
| BmsI | GCATC | 3 cut(s) | 219, 1447, 1967 |
| BmuI | ACTGGG | 2 cut(s) | 730, 2394 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1074 |
| BpiI | GAAGAC | 2 cut(s) | 773, 1216 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1294, 1326 |
| BpmI | CTGGAG | 1 cut(s) | 1916 |
| Bpu10I | CCTNAGC | 3 cut(s) | 437, 1881, 2104 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1726 |
| Bpu14I | TTCGAA | 1 cut(s) | 2406 |
| Bsa29I | ATCGAT | 1 cut(s) | 1687 |
| BsaI | GGTCTC | 2 cut(s) | 1716, 2168 |
| BsaJI | CCNNGG | 5 cut(s) | 185, 213, 970, 1173, 1706 |
| BsaWI | WCCGGW | 2 cut(s) | 1118, 1919 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 317, 347, 611, 641 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 95, 191, 951, 1125, 1862 |
| Bse1I | ACTGG | 8 cut(s) | 286, 484, 736, 778, 1354, 1899, 2389, 2531 |
| Bse3DI | GCAATG | 2 cut(s) | 1195, 2589 |
| BseBI | CCWGG | 2 cut(s) | 102, 1175 |
| BseCI | ATCGAT | 1 cut(s) | 1687 |
| BseDI | CCNNGG | 5 cut(s) | 185, 213, 970, 1173, 1706 |
| BseGI | GGATG | 1 cut(s) | 685 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 95, 191, 951, 1125, 1862 |
| BseMI | GCAATG | 2 cut(s) | 1195, 2589 |
| BseNI | ACTGG | 8 cut(s) | 286, 484, 736, 778, 1354, 1899, 2389, 2531 |
| BseRI | GAGGAG | 7 cut(s) | 325, 619, 928, 1075, 1097, 1808, 1842 |
| BseSI | GKGCMC | 1 cut(s) | 1432 |
| BseXI | GCAGC | 1 cut(s) | 1872 |
| BsgI | GTGCAG | 1 cut(s) | 1412 |
| Bsh1236I | CGCG | 1 cut(s) | 2465 |
| BshFI | GGCC | 1 cut(s) | 2214 |
| BshVI | ATCGAT | 1 cut(s) | 1687 |
| BsiHKAI | GWGCWC | 3 cut(s) | 477, 1035, 1322 |
| BsiSI | CCGG | 2 cut(s) | 1119, 1920 |
| BslFI | GGGAC | 4 cut(s) | 99, 2299, 2320, 2470 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 95, 191, 951, 1125, 1862 |
| BsmAI | GTCTC | 6 cut(s) | 61, 390, 1082, 1716, 2168, 2343 |
| BsmFI | GGGAC | 4 cut(s) | 99, 2299, 2320, 2470 |
| BsmI | GAATGC | 1 cut(s) | 366 |
| BsnI | GGCC | 1 cut(s) | 2214 |
| Bso31I | GGTCTC | 2 cut(s) | 1716, 2168 |
| Bsp119I | TTCGAA | 1 cut(s) | 2406 |
| Bsp1286I | GDGCHC | 4 cut(s) | 477, 1035, 1322, 1432 |
| Bsp1407I | TGTACA | 1 cut(s) | 790 |
| Bsp143I | GATC | 9 cut(s) | 1111, 1395, 1537, 1664, 1981, 2116, 2178, 2247, 2648 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1726 |
| BspANI | GGCC | 1 cut(s) | 2214 |
| BspDI | ATCGAT | 1 cut(s) | 1687 |
| BspFNI | CGCG | 1 cut(s) | 2465 |
| BspLI | GGNNCC | 2 cut(s) | 115, 1304 |
| BspT104I | TTCGAA | 1 cut(s) | 2406 |
| BspTI | CTTAAG | 4 cut(s) | 1072, 1399, 1787, 2240 |
| BspTNI | GGTCTC | 2 cut(s) | 1716, 2168 |
| BsrBI | CCGCTC | 1 cut(s) | 1447 |
| BsrDI | GCAATG | 2 cut(s) | 1195, 2589 |
| BsrGI | TGTACA | 1 cut(s) | 790 |
| BsrI | ACTGG | 8 cut(s) | 286, 484, 736, 778, 1354, 1899, 2389, 2531 |
| BssECI | CCNNGG | 5 cut(s) | 185, 213, 970, 1173, 1706 |
| BssMI | GATC | 9 cut(s) | 1111, 1395, 1537, 1664, 1981, 2116, 2178, 2247, 2648 |
| BssSI | CACGAG | 1 cut(s) | 162 |
| BssT1I | CCWWGG | 3 cut(s) | 185, 970, 1706 |
| Bst2BI | CACGAG | 1 cut(s) | 162 |
| Bst2UI | CCWGG | 2 cut(s) | 102, 1175 |
| Bst4CI | ACNGT | 4 cut(s) | 275, 1418, 1737, 2357 |
| Bst6I | CTCTTC | 6 cut(s) | 343, 637, 869, 946, 1085, 2442 |
| BstAFI | CTTAAG | 4 cut(s) | 1072, 1399, 1787, 2240 |
| BstAUI | TGTACA | 1 cut(s) | 790 |
| BstBI | TTCGAA | 1 cut(s) | 2406 |
| BstC8I | GCNNGC | 5 cut(s) | 169, 443, 512, 1523, 1928 |
| BstDSI | CCRYGG | 1 cut(s) | 213 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 93, 949, 1860 |
| BstF5I | GGATG | 1 cut(s) | 685 |
| BstFNI | CGCG | 1 cut(s) | 2465 |
| BstHHI | GCGC | 1 cut(s) | 2467 |
| BstKTI | GATC | 9 cut(s) | 1114, 1398, 1540, 1667, 1984, 2119, 2181, 2250, 2651 |
| BstMAI | GTCTC | 6 cut(s) | 61, 390, 1082, 1716, 2168, 2343 |
| BstMBI | GATC | 9 cut(s) | 1111, 1395, 1537, 1664, 1981, 2116, 2178, 2247, 2648 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1192, 1444, 2180, 2471 |
| BstNI | CCWGG | 2 cut(s) | 102, 1175 |
| BstNSI | RCATGY | 2 cut(s) | 249, 445 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1074 |
| BstSCI | CCNGG | 2 cut(s) | 100, 1173 |
| BstSFI | CTRYAG | 2 cut(s) | 1733, 2049 |
| BstSLI | GKGCMC | 1 cut(s) | 1432 |
| BstUI | CGCG | 1 cut(s) | 2465 |
| BstV1I | GCAGC | 1 cut(s) | 1872 |
| BstV2I | GAAGAC | 2 cut(s) | 773, 1216 |
| BstX2I | RGATCY | 2 cut(s) | 1395, 1981 |
| BstYI | RGATCY | 2 cut(s) | 1395, 1981 |
| Bsu15I | ATCGAT | 1 cut(s) | 1687 |
| BsuI | GTATCC | 3 cut(s) | 1402, 1645, 1884 |
| BsuRI | GGCC | 1 cut(s) | 2214 |
| BsuTUI | ATCGAT | 1 cut(s) | 1687 |
| BtgI | CCRYGG | 1 cut(s) | 213 |
| BtsCI | GGATG | 1 cut(s) | 685 |
| BtsI | GCAGTG | 1 cut(s) | 2541 |
| BtsIMutI | CAGTG | 8 cut(s) | 477, 771, 919, 1213, 1282, 1329, 1395, 2541 |
| Cac8I | GCNNGC | 5 cut(s) | 169, 443, 512, 1523, 1928 |
| CfoI | GCGC | 1 cut(s) | 2467 |
| Cfr13I | GGNCC | 5 cut(s) | 98, 113, 1750, 1841, 1865 |
| ClaI | ATCGAT | 1 cut(s) | 1687 |
| Csp6I | GTAC | 4 cut(s) | 751, 791, 967, 2326 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 895, 930 |
| CviAII | CATG | 4 cut(s) | 246, 442, 1575, 2329 |
| CviQI | GTAC | 4 cut(s) | 751, 791, 967, 2326 |
| DpnI | GATC | 9 cut(s) | 1113, 1397, 1539, 1666, 1983, 2118, 2180, 2249, 2650 |
| DpnII | GATC | 9 cut(s) | 1111, 1395, 1537, 1664, 1981, 2116, 2178, 2247, 2648 |
| DraI | TTTAAA | 1 cut(s) | 897 |
| Eam1104I | CTCTTC | 6 cut(s) | 343, 637, 869, 946, 1085, 2442 |
| EarI | CTCTTC | 6 cut(s) | 343, 637, 869, 946, 1085, 2442 |
| Ecl136II | GAGCTC | 3 cut(s) | 475, 1033, 1320 |
| Eco130I | CCWWGG | 3 cut(s) | 185, 970, 1706 |
| Eco24I | GRGCYC | 3 cut(s) | 477, 1035, 1322 |
| Eco31I | GGTCTC | 2 cut(s) | 1716, 2168 |
| Eco32I | GATATC | 1 cut(s) | 1131 |
| Eco47I | GGWCC | 5 cut(s) | 98, 113, 1750, 1841, 1865 |
| Eco53kI | GAGCTC | 3 cut(s) | 475, 1033, 1320 |
| Eco57I | CTGAAG | 2 cut(s) | 114, 1540 |
| EcoICRI | GAGCTC | 3 cut(s) | 475, 1033, 1320 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 93, 949, 1860 |
| EcoO109I | RGGNCCY | 2 cut(s) | 98, 1865 |
| EcoRI | GAATTC | 1 cut(s) | 1832 |
| EcoRII | CCWGG | 2 cut(s) | 100, 1173 |
| EcoRV | GATATC | 1 cut(s) | 1131 |
| EcoT14I | CCWWGG | 3 cut(s) | 185, 970, 1706 |
| EcoT38I | GRGCYC | 3 cut(s) | 477, 1035, 1322 |
| ErhI | CCWWGG | 3 cut(s) | 185, 970, 1706 |
| FaeI | CATG | 4 cut(s) | 249, 445, 1578, 2332 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1601, 1633 |
| FaqI | GGGAC | 4 cut(s) | 99, 2299, 2320, 2470 |
| FatI | CATG | 4 cut(s) | 245, 441, 1574, 2328 |
| FauI | CCCGC | 1 cut(s) | 1443 |
| Fnu4HI | GCNGC | 1 cut(s) | 1886 |
| FokI | GGATG | 1 cut(s) | 692 |
| FriOI | GRGCYC | 3 cut(s) | 477, 1035, 1322 |
| Fsp4HI | GCNGC | 1 cut(s) | 1886 |
| FspBI | CTAG | 8 cut(s) | 668, 956, 971, 998, 1140, 2258, 2303, 2615 |
| GlaI | GCGC | 1 cut(s) | 2466 |
| GluI | GCNGC | 1 cut(s) | 1886 |
| GsuI | CTGGAG | 1 cut(s) | 1916 |
| HaeIII | GGCC | 1 cut(s) | 2214 |
| HapII | CCGG | 2 cut(s) | 1119, 1920 |
| HhaI | GCGC | 1 cut(s) | 2467 |
| Hin1II | CATG | 4 cut(s) | 249, 445, 1578, 2332 |
| Hin6I | GCGC | 1 cut(s) | 2465 |
| HinP1I | GCGC | 1 cut(s) | 2465 |
| HincII | GTYRAC | 3 cut(s) | 741, 1021, 1347 |
| HindII | GTYRAC | 3 cut(s) | 741, 1021, 1347 |
| HindIII | AAGCTT | 3 cut(s) | 67, 1013, 1924 |
| HpaI | GTTAAC | 3 cut(s) | 741, 1021, 1347 |
| HpaII | CCGG | 2 cut(s) | 1119, 1920 |
| HphI | GGTGA | 6 cut(s) | 322, 616, 1133, 2021, 2026, 2369 |
| Hpy166II | GTNNAC | 4 cut(s) | 741, 1021, 1347, 1750 |
| Hpy188I | TCNGA | 6 cut(s) | 264, 518, 1369, 1487, 1581, 1607 |
| Hpy8I | GTNNAC | 4 cut(s) | 741, 1021, 1347, 1750 |
| Hpy99I | CGWCG | 1 cut(s) | 1676 |
| HpyCH4III | ACNGT | 4 cut(s) | 275, 1418, 1737, 2357 |
| HpyCH4IV | ACGT | 5 cut(s) | 26, 1221, 1674, 2091, 2334 |
| HpyCH4V | TGCA | 6 cut(s) | 171, 586, 1393, 1469, 1807, 2417 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1192, 1444, 2180, 2471 |
| HpySE526I | ACGT | 5 cut(s) | 26, 1221, 1674, 2091, 2334 |
| Hsp92II | CATG | 4 cut(s) | 249, 445, 1578, 2332 |
| HspAI | GCGC | 1 cut(s) | 2465 |
| KspAI | GTTAAC | 3 cut(s) | 741, 1021, 1347 |
| Kzo9I | GATC | 9 cut(s) | 1111, 1395, 1537, 1664, 1981, 2116, 2178, 2247, 2648 |
| LmnI | GCTCC | 5 cut(s) | 1110, 1192, 1302, 1707, 2080 |
| Lsp1109I | GCAGC | 1 cut(s) | 1872 |
| LweI | GCATC | 3 cut(s) | 219, 1447, 1967 |
| MaeI | CTAG | 8 cut(s) | 668, 956, 971, 998, 1140, 2258, 2303, 2615 |
| MaeII | ACGT | 5 cut(s) | 26, 1221, 1674, 2091, 2334 |
| MalI | GATC | 9 cut(s) | 1113, 1397, 1539, 1666, 1983, 2118, 2180, 2249, 2650 |
| MbiI | CCGCTC | 1 cut(s) | 1447 |
| MboI | GATC | 9 cut(s) | 1111, 1395, 1537, 1664, 1981, 2116, 2178, 2247, 2648 |
| MfeI | CAATTG | 1 cut(s) | 1065 |
| MflI | RGATCY | 2 cut(s) | 1395, 1981 |
| MhlI | GDGCHC | 4 cut(s) | 477, 1035, 1322, 1432 |
| MlyI | GAGTC | 2 cut(s) | 2261, 2302 |
| MmeI | TCCRAC | 2 cut(s) | 1287, 2536 |
| MroXI | GAANNNNTTC | 1 cut(s) | 767 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2333 |
| MspA1I | CMGCKG | 1 cut(s) | 1560 |
| MspCI | CTTAAG | 4 cut(s) | 1072, 1399, 1787, 2240 |
| MspI | CCGG | 2 cut(s) | 1119, 1920 |
| MspR9I | CCNGG | 2 cut(s) | 102, 1175 |
| MunI | CAATTG | 1 cut(s) | 1065 |
| Mva1269I | GAATGC | 1 cut(s) | 366 |
| MvaI | CCWGG | 2 cut(s) | 102, 1175 |
| MvnI | CGCG | 1 cut(s) | 2465 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1192, 1444, 2180, 2471 |
| NdeII | GATC | 9 cut(s) | 1111, 1395, 1537, 1664, 1981, 2116, 2178, 2247, 2648 |
| NlaIII | CATG | 4 cut(s) | 249, 445, 1578, 2332 |
| NlaIV | GGNNCC | 2 cut(s) | 115, 1304 |
| NmuCI | GTSAC | 3 cut(s) | 179, 223, 2253 |
| NspI | RCATGY | 2 cut(s) | 249, 445 |
| NspV | TTCGAA | 1 cut(s) | 2406 |
| PaeI | GCATGC | 1 cut(s) | 445 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2321 |
| PctI | GAATGC | 1 cut(s) | 366 |
| PdmI | GAANNNNTTC | 1 cut(s) | 767 |
| PfeI | GAWTC | 8 cut(s) | 124, 502, 559, 1154, 1272, 1482, 1761, 2153 |
| PkrI | GCNGC | 1 cut(s) | 1887 |
| PleI | GAGTC | 2 cut(s) | 2260, 2302 |
| PpsI | GAGTC | 2 cut(s) | 2260, 2302 |
| PpuMI | RGGWCCY | 2 cut(s) | 98, 1865 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1074 |
| PsiI | TTATAA | 2 cut(s) | 537, 1718 |
| Psp124BI | GAGCTC | 3 cut(s) | 477, 1035, 1322 |
| Psp5II | RGGWCCY | 2 cut(s) | 98, 1865 |
| Psp6I | CCWGG | 2 cut(s) | 100, 1173 |
| PspGI | CCWGG | 2 cut(s) | 100, 1173 |
| PspN4I | GGNNCC | 2 cut(s) | 115, 1304 |
| PspPI | GGNCC | 5 cut(s) | 98, 113, 1750, 1841, 1865 |
| PspPPI | RGGWCCY | 2 cut(s) | 98, 1865 |
| PsuI | RGATCY | 2 cut(s) | 1395, 1981 |
| RsaI | GTAC | 4 cut(s) | 752, 792, 968, 2327 |
| RsaNI | GTAC | 4 cut(s) | 751, 791, 967, 2326 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2333 |
| SacI | GAGCTC | 3 cut(s) | 477, 1035, 1322 |
| SatI | GCNGC | 1 cut(s) | 1886 |
| Sau3AI | GATC | 9 cut(s) | 1111, 1395, 1537, 1664, 1981, 2116, 2178, 2247, 2648 |
| Sau96I | GGNCC | 5 cut(s) | 98, 113, 1750, 1841, 1865 |
| SchI | GAGTC | 2 cut(s) | 2261, 2302 |
| ScrFI | CCNGG | 2 cut(s) | 102, 1175 |
| SduI | GDGCHC | 4 cut(s) | 477, 1035, 1322, 1432 |
| SfaNI | GCATC | 3 cut(s) | 219, 1447, 1967 |
| SfcI | CTRYAG | 2 cut(s) | 1733, 2049 |
| SfuI | TTCGAA | 1 cut(s) | 2406 |
| SinI | GGWCC | 5 cut(s) | 98, 113, 1750, 1841, 1865 |
| SmiI | ATTTAAAT | 1 cut(s) | 897 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2333 |
| SmlI | CTYRAG | 4 cut(s) | 1072, 1399, 1787, 2240 |
| SmoI | CTYRAG | 4 cut(s) | 1072, 1399, 1787, 2240 |
| SphI | GCATGC | 1 cut(s) | 445 |
| SspMI | CTAG | 8 cut(s) | 668, 956, 971, 998, 1140, 2258, 2303, 2615 |
| SstI | GAGCTC | 3 cut(s) | 477, 1035, 1322 |
| StyD4I | CCNGG | 2 cut(s) | 100, 1173 |
| StyI | CCWWGG | 3 cut(s) | 185, 970, 1706 |
| SwaI | ATTTAAAT | 1 cut(s) | 897 |
| TaaI | ACNGT | 4 cut(s) | 275, 1418, 1737, 2357 |
| TaiI | ACGT | 5 cut(s) | 29, 1224, 1677, 2094, 2337 |
| TaqI | TCGA | 8 cut(s) | 1035, 1110, 1312, 1671, 1687, 2195, 2250, 2406 |
| TaqII | GACCGA | 2 cut(s) | 692, 2150 |
| TatI | WGTACW | 1 cut(s) | 790 |
| TfiI | GAWTC | 8 cut(s) | 124, 502, 559, 1154, 1272, 1482, 1761, 2153 |
| TscAI | CASTG | 8 cut(s) | 484, 778, 919, 1213, 1282, 1329, 1395, 2541 |
| TseFI | GTSAC | 3 cut(s) | 179, 223, 2253 |
| TseI | GCWGC | 1 cut(s) | 1885 |
| Tsp45I | GTSAC | 3 cut(s) | 179, 223, 2253 |
| TspGWI | ACGGA | 3 cut(s) | 290, 599, 1773 |
| TspRI | CASTG | 8 cut(s) | 484, 778, 919, 1213, 1282, 1329, 1395, 2541 |
| Vha464I | CTTAAG | 4 cut(s) | 1072, 1399, 1787, 2240 |
| VpaK11BI | GGWCC | 5 cut(s) | 98, 113, 1750, 1841, 1865 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 93, 949, 1860 |
| XapI | RAATTY | 7 cut(s) | 552, 647, 1283, 1381, 1566, 1832, 2145 |
| XceI | RCATGY | 2 cut(s) | 249, 445 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1296 |
| XmaJI | CCTAGG | 1 cut(s) | 970 |
| XmnI | GAANNNNTTC | 1 cut(s) | 767 |
| XspI | CTAG | 8 cut(s) | 668, 956, 971, 998, 1140, 2258, 2303, 2615 |