MD07G1069300.v1.1

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0000024
Physical Location & Seq
Reverse (-)
6538579 .. 6541440
2862 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1069300.v1.1.491

Sequence Viewer

Length: 2862 bp
ATGTGTTATATAGTTTCCAAAGTTGTGTTGTTTCATCTCGTGGTTGTTAGCTCATCAGTTTCCTCATTGCAGCAATCTTGTCGTGACGAGGAGAGGTCTGCCTTGCTGCAGTTCAAGGAAAGCTTCATCATTAACAGATCTGCCTCGTATTCTGATGACGCTTATCCTAAGATTTTGCAGTGGAAACAAGCTGAAGGACGAAATGGCAACTGCTGTGCATGGGATGGCATTGAGTGTGATGAGAGGACGGGTCATGTGATTGGCCTTGATCTTAGTAGCAGCTGTCTCCTGGGCTCTATCAACTCCAACAGCAGCATTTTCCGGCTTGATCAGCTTCAAGTGCTGAACCTCGCAGACAACAACTTCAGCTCCTCTCCAATTCCTACTAGCATTAGGAATTTCCCAAGGCTCACGTATCTTAATCTCTCTAGTTCTTTATTTTCTGGCCAAATCCCATCCCAAATTTCACAGTTGGCCAAATTGTCGTCCCTTGATCTGTCTTTGAATCATTTAACCGGTCCAATTCCTTCTCTAGGAAATCTCACCCACCTCACAAAACTATTTCTGTCTTCCAACAAAGGTCTAACTGGTCATTTTCCTGAATTTAATACAAGCAGTCCTCTCACTTCACTGTATCTTAGCCACACTAGCTTATTCGGAAATTTGCCTTCTTCAATCGAAAAGCTTGATTCATTAAACACGCTGGATTTGGCAGCATGCAATTTCTCGGGCTTGGTTCCATCTTCACTTGGTAATCTTGGGCAGCTCATATATTTAGACCTTTCAGAAAATAACTTTAACGGTCCAGTCCCTAGTTCATTGGCAAACCTTACCCAACTGAAGGAGCTCTATCTTGAATATAATGATTTTAGTGATTCCATCCCCTCTGCTCTCTGTAATCTCAACAAGCTCGAAGTCCTGTCACTTTTCTCTAATAATTTTAGGGGTTACATCCCGACTTCACTAGGAAATCTCACCCACCTTACAGTACTTGATCTGTCTTCGAATCAGTTAACCGGTCAAATTCCTTCTCTAGGAAATCTCATCCACCTCACAGTACTTTTTCTGTCTTCGAATCGGTTAGCCGGTCCAATTCCTTCTCTAGAAAATCTCACCCACCTCATAGCACTTTATCTGTCTTCGAATCAGTTAACCGGTCCAATGCCTAATTCCTTATCCGATCTCATCAATCTCGAGGGATTAGATCTAACTGATAATAATCTGACCGGTACAGTGGAGTTCCACGTCATGTTTCATAAGTTACAAGGGCTCGTCGATTTACAACTATCTCGTAACAGTTTGAAAATTTTGACAGAAACAGAAAGTATGAATGCAAGCCTACTTCCAAAGTTAAAATTTATAGGATTGGGTTCGTGCAACATAAGAGAGTTCCCAAGTTTCCTGCAGTATCGAGAAACATTGGTGTCCTTGGACCTTTCCACCAACAATTTGCATGGCAAAGTACCGAAATGGATGTTGAACACAAGCACACAGACTTTGACGTACATGGACATTTCTCACAACTTCCTTTCAAGCATTGTCCAGCCTTCAGATGCCGTTCCTTGGGTTAACCTACAAGTTTTAGGGCTCAAGAATAACACGCTACATGGGCCGCTACCGATGCCTCCACCACACACAGTTCACTATAGTGTTGCAAACAACAATCTTAATGGAACAATTTCACCATTGATCTGCAGTCTGAATTTTCTTCAGCTCCTTGATCTCTCCAACAACAATATGAGTGGAATGCTTCCCCCCTGTCTCGGAAACTTCAGCGTTGATCTGCGAGTTTTAAATCTTGGAAACAACTCTTTCAGCGGCTTTCTTCCTGAAACATACACCAACACAAGCAGTCTGAGGTGGATTGATGTTAGTCATAACCAATTGCGAGGGCAACTACCAAGGTCGTTGGGGAACTGCATGAAACTTGAGTTTATTGATCTGTCATACAATAAATTCAGCGACGTTTTTCCCTTTTGGTTGGGGGCTCTTCCAGAGTTAAAACTTTTGGCAATGCACCAGAATGCGTTCTACGGTCTGATAGAGGAACCGGATCTGGACAATGCTGAATATTTCCCTGAGTTGAGATTTCTGGATCTATCTTCTAATAGCTTCAGAGGCAAGTTTCCATCTCAAAACATGTTTTCCGGGAATGTCATGAGGGGTGTCACTCGAAACCAGTCAACATATATGAAGGTAGACACAACTATCGACACTCCTAGTCTTCAGCTAATCTTTTATGAATTTTACTCAATCACGATAACTAGCAAAAGTGTGGAGAGATATTATCCGAAGATTCAAGCAGCCCTTGCAGCGGTTGACATCTCAAGCAACAAATTTGAAGGGAGGATTCCTGAATTTATTGGGAACCTAGACGGGTTGATGTCATTCAATATGTCTGGTAACCTCCTAACTGGTCCCATCCCATCATCTTTCGGGAATTTAAGAAACCTTGAATCACTGGACCTTTCACACAACAAGCTTTCAGGACAAATCCCTCAAAGCCTCACGCAGCTTACATTCCTTGCAGTATTCATTGTCTCTAACAACAGTTTGACAGGTCCAATACCGCATGGAACCCAACTTACTTCATTCAATAGCAGTTCATATGAAGGAAACCCTGGATTGTGTGGAGATCCCTTGCCAAAGAAATGCGGAGATCCCAAGGCTCCTCGCCTGTCTCCTTCAAAAACTGAAGAAAATGATTCAGGCTCGTTTGAATTTGATTGGAAATTTGTTTTGGCTGGTCTCGGAAGTGGGTTGGTAGTGGGAGTTGTTCTTTCTGATGTGGTGATCACAAAGAAGCATGAATGGTTTGTTGAGATTGTTAAAACCATCAAGCTGATGATAGGAACTTCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8

Protein Analysis

954

Amino Acids

104.85

Weight (kDa)

5.68

Isoelectric Point (pI)

40.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 100 - 194 5.6e-06 Leucine-rich repeat region
LRR_14 PF23598 211 - 310 1.5e-12 Leucine-rich repeat region
LRR_8 PF13855 231 - 290 4e-09 Leucine rich repeat
LRR_14 PF23598 320 - 506 5.7e-08 Leucine-rich repeat region
LRR_4 PF12799 326 - 369 3.1e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 770 - 828 2.2e-08 Leucine rich repeat
LRR_8 PF13855 794 - 852 4.4e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 2199
AciI CCGC 5 cut(s) 1613, 1818, 2315, 2570, 2655
AclWI GGATC 4 cut(s) 2061, 2103, 2630, 2654
AcoI YGGCCR 2 cut(s) 445, 474
AcuI CTGAAG 9 cut(s) 213, 349, 860, 1533, 1694, 1756, 2098, 2210, 2715
AfaI GTAC 5 cut(s) 990, 1059, 1231, 1464, 1505
AfiI CCNNNNNNNGG 6 cut(s) 533, 841, 1034, 1563, 1763, 2314
AflIII ACRYGT 1 cut(s) 2139
AgeI ACCGGT 4 cut(s) 515, 1016, 1154, 1226
AjiI CACGTC 1 cut(s) 1246
AjnI CCWGG 2 cut(s) 288, 2620
AjuI GAANNNNNNNTTGG 4 cut(s) 1153, 1185, 2723, 2755
AleI CACNNNNGTG 1 cut(s) 1647
Alw21I GWGCWC 1 cut(s) 849
Alw26I GTCTC 5 cut(s) 290, 1766, 2545, 2685, 2753
AlwI GGATC 4 cut(s) 2061, 2103, 2630, 2654
Ama87I CYCGRG 2 cut(s) 727, 1193
AoxI GGCC 4 cut(s) 262, 445, 474, 1610
ApeKI GCWGC 9 cut(s) 70, 106, 279, 312, 713, 763, 2303, 2312, 2512
AsiGI ACCGGT 4 cut(s) 515, 1016, 1154, 1226
Asp700I GAANNNNTTC 2 cut(s) 1678, 2027
AspS9I GGNCC 9 cut(s) 518, 803, 1088, 1157, 1432, 1610, 2417, 2464, 2561
AsuC2I CCSGG 1 cut(s) 2149
AsuHPI GGTGA 5 cut(s) 535, 967, 1105, 1674, 2803
AsuII TTCGAA 3 cut(s) 1004, 1073, 1142
AvaI CYCGRG 2 cut(s) 727, 1193
AvaII GGWCC 8 cut(s) 518, 803, 1088, 1157, 1432, 2417, 2464, 2561
BalI TGGCCA 2 cut(s) 447, 476
BanII GRGCYC 5 cut(s) 296, 849, 1272, 1590, 1990
BauI CACGAG 1 cut(s) 38
BbsI GAAGAC 5 cut(s) 561, 993, 1062, 1131, 2216
Bbv12I GWGCWC 1 cut(s) 849
BbvI GCAGC 9 cut(s) 82, 93, 291, 324, 725, 775, 2315, 2324, 2524
BccI CCATC 8 cut(s) 218, 463, 748, 887, 2137, 2429, 2434, 2843
BceAI ACGGC 1 cut(s) 1541
BcgI CGANNNNNNTGC 2 cut(s) 62, 96
BciT130I CCWGG 2 cut(s) 290, 2622
BclI TGATCA 2 cut(s) 328, 2793
BcnI CCSGG 1 cut(s) 2149
BcoDI GTCTC 5 cut(s) 290, 1766, 2545, 2685, 2753
BfmI CTRYAG 4 cut(s) 107, 1403, 1645, 1693
BglII AGATCT 2 cut(s) 137, 1204
BmcAI AGTACT 2 cut(s) 990, 1059
Bme1390I CCNGG 3 cut(s) 290, 2149, 2622
Bme18I GGWCC 8 cut(s) 518, 803, 1088, 1157, 1432, 2417, 2464, 2561
BmeT110I CYCGRG 2 cut(s) 727, 1193
BmgBI CACGTC 1 cut(s) 1246
BmgT120I GGNCC 9 cut(s) 518, 803, 1088, 1157, 1432, 1610, 2417, 2464, 2561
BmiI GGNNCC 6 cut(s) 738, 2049, 2369, 2419, 2578, 2670
BmrFI CCNGG 3 cut(s) 290, 2149, 2622
BmsI GCATC 2 cut(s) 1543, 1611
BpiI GAAGAC 5 cut(s) 561, 993, 1062, 1131, 2216
Bpu14I TTCGAA 3 cut(s) 1004, 1073, 1142
BpuEI CTTGAG 3 cut(s) 1574, 1949, 2311
BpuMI CCSGG 1 cut(s) 2149
BsaAI YACGTR 1 cut(s) 414
BsaBI GATNNNNATC 1 cut(s) 1218
BsaI GGTCTC 1 cut(s) 2753
BsaJI CCNNGG 7 cut(s) 289, 404, 1428, 1562, 1901, 2620, 2664
BsaWI WCCGGW 5 cut(s) 515, 1016, 1154, 1226, 2050
BsaXI ACNNNNNCTCC 2 cut(s) 353, 383
Bsc4I CCNNNNNNNGG 6 cut(s) 533, 841, 1034, 1563, 1763, 2314
Bse118I RCCGGY 5 cut(s) 515, 1016, 1085, 1154, 1226
Bse1I ACTGG 5 cut(s) 592, 806, 2179, 2419, 2466
Bse3DI GCAATG 2 cut(s) 65, 2019
Bse8I GATNNNNATC 1 cut(s) 1218
BseBI CCWGG 2 cut(s) 290, 2622
BseDI CCNNGG 7 cut(s) 289, 404, 1428, 1562, 1901, 2620, 2664
BseGI GGATG 7 cut(s) 229, 455, 879, 951, 1044, 1479, 2421
BseJI GATNNNNATC 1 cut(s) 1218
BseLI CCNNNNNNNGG 6 cut(s) 533, 841, 1034, 1563, 1763, 2314
BseMI GCAATG 2 cut(s) 65, 2019
BseMII CTCAG 2 cut(s) 1847, 2070
BseNI ACTGG 5 cut(s) 592, 806, 2179, 2419, 2466
BseRI GAGGAG 3 cut(s) 104, 361, 2661
BseXI GCAGC 9 cut(s) 82, 93, 291, 324, 725, 775, 2315, 2324, 2524
BshFI GGCC 4 cut(s) 264, 447, 476, 1612
BshTI ACCGGT 4 cut(s) 515, 1016, 1154, 1226
BsiHKAI GWGCWC 1 cut(s) 849
BsiHKCI CYCGRG 2 cut(s) 727, 1193
BsiSI CCGG 8 cut(s) 322, 516, 1017, 1086, 1155, 1227, 2051, 2148
BslFI GGGAC 3 cut(s) 472, 794, 2403
BslI CCNNNNNNNGG 6 cut(s) 533, 841, 1034, 1563, 1763, 2314
BsmAI GTCTC 5 cut(s) 290, 1766, 2545, 2685, 2753
BsmFI GGGAC 3 cut(s) 472, 794, 2403
BsmI GAATGC 3 cut(s) 1336, 1752, 2029
BsnI GGCC 4 cut(s) 264, 447, 476, 1612
Bso31I GGTCTC 1 cut(s) 2753
BsoBI CYCGRG 2 cut(s) 727, 1193
Bsp119I TTCGAA 3 cut(s) 1004, 1073, 1142
Bsp1286I GDGCHC 5 cut(s) 296, 849, 1272, 1590, 1990
BspACI CCGC 5 cut(s) 1613, 1818, 2315, 2570, 2655
BspANI GGCC 4 cut(s) 264, 447, 476, 1612
BspCNI CTCAG 2 cut(s) 1848, 2071
BspHI TCATGA 1 cut(s) 2157
BspLI GGNNCC 6 cut(s) 738, 2049, 2369, 2419, 2578, 2670
BspMAI CTGCAG 3 cut(s) 111, 1407, 1697
BspPI GGATC 4 cut(s) 2061, 2103, 2630, 2654
BspQI GCTCTTC 1 cut(s) 1995
BspT104I TTCGAA 3 cut(s) 1004, 1073, 1142
BspTNI GGTCTC 1 cut(s) 2753
BsrDI GCAATG 2 cut(s) 65, 2019
BsrFI RCCGGY 5 cut(s) 515, 1016, 1085, 1154, 1226
BsrI ACTGG 5 cut(s) 592, 806, 2179, 2419, 2466
BssAI RCCGGY 5 cut(s) 515, 1016, 1085, 1154, 1226
BssECI CCNNGG 7 cut(s) 289, 404, 1428, 1562, 1901, 2620, 2664
BssSI CACGAG 1 cut(s) 38
BssT1I CCWWGG 5 cut(s) 404, 1428, 1562, 1901, 2664
Bst2BI CACGAG 1 cut(s) 38
Bst2UI CCWGG 2 cut(s) 290, 2622
Bst6I CTCTTC 1 cut(s) 1995
BstAPI GCANNNNNTGC 1 cut(s) 2309
BstBAI YACGTR 1 cut(s) 414
BstBI TTCGAA 3 cut(s) 1004, 1073, 1142
BstC8I GCNNGC 2 cut(s) 718, 1336
BstDEI CTNAG 5 cut(s) 168, 272, 638, 1856, 2079
BstEII GGTNACC 1 cut(s) 2402
BstENI CCTNNNNNAGG 2 cut(s) 531, 1032
BstF5I GGATG 7 cut(s) 229, 455, 879, 951, 1044, 1479, 2421
BstMAI GTCTC 5 cut(s) 290, 1766, 2545, 2685, 2753
BstMWI GCNNNNNNNGC 8 cut(s) 331, 340, 648, 1609, 1621, 2118, 2309, 2312
BstNI CCWGG 2 cut(s) 290, 2622
BstNSI RCATGY 2 cut(s) 720, 2143
BstPI GGTNACC 1 cut(s) 2402
BstSCI CCNGG 3 cut(s) 288, 2147, 2620
BstSFI CTRYAG 4 cut(s) 107, 1403, 1645, 1693
BstV1I GCAGC 9 cut(s) 82, 93, 291, 324, 725, 775, 2315, 2324, 2524
BstV2I GAAGAC 5 cut(s) 561, 993, 1062, 1131, 2216
BstX2I RGATCY 6 cut(s) 137, 1204, 2053, 2095, 2635, 2659
BstYI RGATCY 6 cut(s) 137, 1204, 2053, 2095, 2635, 2659
BsuRI GGCC 4 cut(s) 264, 447, 476, 1612
BtrI CACGTC 1 cut(s) 1246
BtsCI GGATG 7 cut(s) 229, 455, 879, 951, 1044, 1479, 2421
BtsI GCAGTG 1 cut(s) 185
BtsIMutI CAGTG 4 cut(s) 185, 629, 1239, 2459
Cac8I GCNNGC 2 cut(s) 718, 1336
CciI TCATGA 1 cut(s) 2157
Cfr10I RCCGGY 5 cut(s) 515, 1016, 1085, 1154, 1226
Cfr13I GGNCC 9 cut(s) 518, 803, 1088, 1157, 1432, 1610, 2417, 2464, 2561
CseI GACGC 1 cut(s) 167
Csp6I GTAC 5 cut(s) 989, 1058, 1230, 1463, 1504
CspAI ACCGGT 4 cut(s) 515, 1016, 1154, 1226
CspCI CAANNNNNGTGG 2 cut(s) 1723, 1758
CviQI GTAC 5 cut(s) 989, 1058, 1230, 1463, 1504
DdeI CTNAG 5 cut(s) 168, 272, 638, 1856, 2079
DraI TTTAAA 1 cut(s) 1794
EaeI YGGCCR 2 cut(s) 445, 474
Eam1104I CTCTTC 1 cut(s) 1995
EarI CTCTTC 1 cut(s) 1995
Ecl136II GAGCTC 1 cut(s) 847
Eco130I CCWWGG 5 cut(s) 404, 1428, 1562, 1901, 2664
Eco24I GRGCYC 5 cut(s) 296, 849, 1272, 1590, 1990
Eco31I GGTCTC 1 cut(s) 2753
Eco47I GGWCC 8 cut(s) 518, 803, 1088, 1157, 1432, 2417, 2464, 2561
Eco53kI GAGCTC 1 cut(s) 847
Eco57I CTGAAG 9 cut(s) 213, 349, 860, 1533, 1694, 1756, 2098, 2210, 2715
Eco88I CYCGRG 2 cut(s) 727, 1193
Eco91I GGTNACC 1 cut(s) 2402
EcoICRI GAGCTC 1 cut(s) 847
EcoNI CCTNNNNNAGG 2 cut(s) 531, 1032
EcoO65I GGTNACC 1 cut(s) 2402
EcoRII CCWGG 2 cut(s) 288, 2620
EcoT14I CCWWGG 5 cut(s) 404, 1428, 1562, 1901, 2664
EcoT38I GRGCYC 5 cut(s) 296, 849, 1272, 1590, 1990
ErhI CCWWGG 5 cut(s) 404, 1428, 1562, 1901, 2664
FalI AAGNNNNNCTT 4 cut(s) 107, 139, 2292, 2324
FaqI GGGAC 3 cut(s) 472, 794, 2403
FauNDI CATATG 1 cut(s) 2608
FbaI TGATCA 2 cut(s) 328, 2793
FblI GTMKAC 1 cut(s) 2199
FokI GGATG 7 cut(s) 236, 442, 866, 938, 1031, 1486, 2408
FriOI GRGCYC 5 cut(s) 296, 849, 1272, 1590, 1990
HaeIII GGCC 4 cut(s) 264, 447, 476, 1612
HapII CCGG 8 cut(s) 322, 516, 1017, 1086, 1155, 1227, 2051, 2148
HgaI GACGC 1 cut(s) 167
HincII GTYRAC 5 cut(s) 1014, 1152, 1570, 2184, 2320
HindII GTYRAC 5 cut(s) 1014, 1152, 1570, 2184, 2320
HindIII AAGCTT 3 cut(s) 121, 683, 2480
HpaI GTTAAC 3 cut(s) 1014, 1152, 1570
HpaII CCGG 8 cut(s) 322, 516, 1017, 1086, 1155, 1227, 2051, 2148
HphI GGTGA 5 cut(s) 535, 967, 1105, 1674, 2803
Hpy166II GTNNAC 7 cut(s) 1014, 1152, 1570, 1642, 2184, 2200, 2320
Hpy8I GTNNAC 7 cut(s) 1014, 1152, 1570, 1642, 2184, 2200, 2320
Hpy99I CGWCG 2 cut(s) 1277, 1967
HpyCH4IV ACGT 4 cut(s) 413, 1245, 1502, 1965
HpyF10VI GCNNNNNNNGC 8 cut(s) 331, 340, 648, 1609, 1621, 2118, 2309, 2312
HpyF3I CTNAG 5 cut(s) 168, 272, 638, 1856, 2079
HpySE526I ACGT 4 cut(s) 413, 1245, 1502, 1965
Ksp22I TGATCA 2 cut(s) 328, 2793
KspAI GTTAAC 3 cut(s) 1014, 1152, 1570
LguI GCTCTTC 1 cut(s) 1995
LmnI GCTCC 4 cut(s) 374, 844, 1719, 2674
Lsp1109I GCAGC 9 cut(s) 82, 93, 291, 324, 725, 775, 2315, 2324, 2524
LweI GCATC 2 cut(s) 1543, 1611
MaeII ACGT 4 cut(s) 413, 1245, 1502, 1965
MaeIII GTNAC 7 cut(s) 83, 921, 947, 1260, 1292, 2167, 2402
MfeI CAATTG 1 cut(s) 1883
MflI RGATCY 6 cut(s) 137, 1204, 2053, 2095, 2635, 2659
MhlI GDGCHC 5 cut(s) 296, 849, 1272, 1590, 1990
MlsI TGGCCA 2 cut(s) 447, 476
MluNI TGGCCA 2 cut(s) 447, 476
MmeI TCCRAC 3 cut(s) 330, 597, 1752
Mox20I TGGCCA 2 cut(s) 447, 476
MroXI GAANNNNTTC 2 cut(s) 1678, 2027
MscI TGGCCA 2 cut(s) 447, 476
MslI CAYNNNNRTG 2 cut(s) 1647, 2022
Msp20I TGGCCA 2 cut(s) 447, 476
MspA1I CMGCKG 3 cut(s) 282, 1818, 2315
MspI CCGG 8 cut(s) 322, 516, 1017, 1086, 1155, 1227, 2051, 2148
MspR9I CCNGG 3 cut(s) 290, 2149, 2622
MunI CAATTG 1 cut(s) 1883
Mva1269I GAATGC 3 cut(s) 1336, 1752, 2029
MvaI CCWGG 2 cut(s) 290, 2622
MwoI GCNNNNNNNGC 8 cut(s) 331, 340, 648, 1609, 1621, 2118, 2309, 2312
NciI CCSGG 1 cut(s) 2149
NdeI CATATG 1 cut(s) 2608
NlaIV GGNNCC 6 cut(s) 738, 2049, 2369, 2419, 2578, 2670
NmuCI GTSAC 3 cut(s) 83, 921, 2167
NspI RCATGY 2 cut(s) 720, 2143
NspV TTCGAA 3 cut(s) 1004, 1073, 1142
OliI CACNNNNGTG 1 cut(s) 1647
PaeI GCATGC 1 cut(s) 720
PaeR7I CTCGAG 1 cut(s) 1193
PagI TCATGA 1 cut(s) 2157
PciI ACATGT 1 cut(s) 2139
PciSI GCTCTTC 1 cut(s) 1995
PctI GAATGC 3 cut(s) 1336, 1752, 2029
PdmI GAANNNNTTC 2 cut(s) 1678, 2027
PfoI TCCNGGA 1 cut(s) 2147
PinAI ACCGGT 4 cut(s) 515, 1016, 1154, 1226
Ppu21I YACGTR 1 cut(s) 414
PscI ACATGT 1 cut(s) 2139
Psp124BI GAGCTC 1 cut(s) 849
Psp6I CCWGG 2 cut(s) 288, 2620
PspEI GGTNACC 1 cut(s) 2402
PspGI CCWGG 2 cut(s) 288, 2620
PspN4I GGNNCC 6 cut(s) 738, 2049, 2369, 2419, 2578, 2670
PspPI GGNCC 9 cut(s) 518, 803, 1088, 1157, 1432, 1610, 2417, 2464, 2561
PsrI GAACNNNNNNTAC 2 cut(s) 2569, 2601
PstI CTGCAG 3 cut(s) 111, 1407, 1697
PsuI RGATCY 6 cut(s) 137, 1204, 2053, 2095, 2635, 2659
PvuII CAGCTG 1 cut(s) 282
RsaI GTAC 5 cut(s) 990, 1059, 1231, 1464, 1505
RsaNI GTAC 5 cut(s) 989, 1058, 1230, 1463, 1504
RseI CAYNNNNRTG 2 cut(s) 1647, 2022
SacI GAGCTC 1 cut(s) 849
SapI GCTCTTC 1 cut(s) 1995
Sau96I GGNCC 9 cut(s) 518, 803, 1088, 1157, 1432, 1610, 2417, 2464, 2561
ScaI AGTACT 2 cut(s) 990, 1059
ScrFI CCNGG 3 cut(s) 290, 2149, 2622
SduI GDGCHC 5 cut(s) 296, 849, 1272, 1590, 1990
SfaNI GCATC 2 cut(s) 1543, 1611
SfcI CTRYAG 4 cut(s) 107, 1403, 1645, 1693
Sfr274I CTCGAG 1 cut(s) 1193
SfuI TTCGAA 3 cut(s) 1004, 1073, 1142
SinI GGWCC 8 cut(s) 518, 803, 1088, 1157, 1432, 2417, 2464, 2561
SlaI CTCGAG 1 cut(s) 1193
SmiMI CAYNNNNRTG 2 cut(s) 1647, 2022
SmlI CTYRAG 4 cut(s) 1193, 1589, 1928, 2326
SmoI CTYRAG 4 cut(s) 1193, 1589, 1928, 2326
SphI GCATGC 1 cut(s) 720
SsiI CCGC 5 cut(s) 1613, 1818, 2315, 2570, 2655
SspI AATATT 1 cut(s) 2072
SstI GAGCTC 1 cut(s) 849
StyD4I CCNGG 3 cut(s) 288, 2147, 2620
StyI CCWWGG 5 cut(s) 404, 1428, 1562, 1901, 2664
TaiI ACGT 4 cut(s) 416, 1248, 1505, 1968
TatI WGTACW 2 cut(s) 988, 1057
TauI GCSGC 2 cut(s) 1615, 1821
TscAI CASTG 4 cut(s) 185, 636, 1239, 2466
TseFI GTSAC 3 cut(s) 83, 921, 2167
TseI GCWGC 9 cut(s) 70, 106, 279, 312, 713, 763, 2303, 2312, 2512
Tsp45I GTSAC 3 cut(s) 83, 921, 2167
TspRI CASTG 4 cut(s) 185, 636, 1239, 2466
VpaK11BI GGWCC 8 cut(s) 518, 803, 1088, 1157, 1432, 2417, 2464, 2561
XagI CCTNNNNNAGG 2 cut(s) 531, 1032
XbaI TCTAGA 1 cut(s) 1102
XceI RCATGY 2 cut(s) 720, 2143
XhoI CTCGAG 1 cut(s) 1193
XmiI GTMKAC 1 cut(s) 2199
XmnI GAANNNNTTC 2 cut(s) 1678, 2027
ZrmI AGTACT 2 cut(s) 990, 1059
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.