Rmu_sc0027638.1_g000002

receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0027638.1
OG0000024
Physical Location & Seq
Forward (+)
439 .. 5339
4901 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0027638.1_g000002.1.cds

Sequence Viewer

Length: 2928 bp
atgcttattgggttggtgatcgaagacgcggcgggcgtgtttgatcaggtgcgagggggaggaggagcaggtggtgatgaatttggtgaggagattgaggttggtttcgagggcgtttcggaggatgaaggcgtggatttggagaagagagagtggtgttgtgttggcttgttggagaagcctgcagattgcaaggatgaggagagctctgccttgctgcaattcaaggaaagctttattattgacagatctgcttctggttatgatggtgcttatccaaaggttttgtcgtggaaacaaaacaacagctgctgttcatgggatggtatcgagtgtgatcagagtacgggttacgtgattggccttgatctcagtagcagttgtctatatggctccatcaactccaacagcaccctcttccgccttgttaatcttcagagcctgaaccttgccgacaataacttcaactactctgaaattcctacaaccattaggaatctcccaaagctcaggtatctcaacctctctgcctctgtattttctggccaagtcccgtctgaagtttcccagttgtccaagttgtcatcccttgacttatctctgaatcttgatggtgtttctattgacgggttattgacccttaacccatcctatctggcaagccttgttcataacttaactagacttgaaaatctttatctaggctacattaccatatcatcgaaaattcctcaatccatggcgaatttgtcatttctgacatccctctctctgaggaattgtcaattgtttggggaattcccagtaagaattttccagttacaaaacttgaaacttcttagtgtgagaaacaacccagatcttactggttatctgcctgaattcaatcaaagtagtcctctatcatcactcgtacttgctggaactaggttctccggaaacctaccttcttcaatccaaaagcttgattctttggaagagttgaatgtgggtggatgcaatttttcagaagggttggttccctcttttcttggtaagcttagacagcttacttatctcgacatttcaaaaaacaattatggcggtccaattcctgattcgttggcaaatcttacacaattgatagtgtttaggattggtacgagtcacttgacaggtccaataccatcttggttaggaaacttcagcaaactgatttacctagacttttcttataatagattgaatggttcaattccgcagacattttccaatctcataaatcttgagattctttatcttcagtacaatgacctgagtggtacagtggagtttcaaatgtttgaaaatctacaaaatctttaccaactccatctaaatggtaataatctgcaatttctcactgaatccacaattgtgaatgcatctgttccccaatttacaattctaggattgagttcatgcaacataagagagttcccatctttcttaagatatcaaaagaatttgcagaagttgtaccttgctgaaaacaaactctatggtcaagtaccgaaatggatgtggaatatgagcatcgatactttgatgtacttggacattgatcaaaacttccttacaggctttgagcaacctccagttgtccttccttgggttaaccttcgatttttaaagctctcttccaacatgttccatggaccactgccgatacctccaccgtcaatcttaggctatgaaattcaggacaataaactgaaaggagaagtttcaccagagatttgcaacctgagttctattcaggcccttgatttgtccaacaacaacttgagtggcgtgcttccacactgtatcggaaacttcagtgaccgtctaatacttttacttcttgcaaataactccttccaagggattcttccacaaacatacagtaagaaaagcaacttgaggatgattgatgttagttataaccaattgcaggggcaattaccgaggtcgctggctaactgtgtgatgcttgagactttaattctgtcagacaacaaattccaagatgtcttcccctcttggttggtgactcttccagagttaaaagtgttggcaatgcgccataatggtttccatggagtgatcggaaagcctgaaaacaataatggtttcctgaacttgcgcattttagatctatcttacaataatttcagaggtgagtttctttctgaatacatcttctctgagtatgccatgagatcaaatatcacagtcaaccagtcaacttatatgaagactaacataacctatgatgctggtggtggtgctattactttggattacggttacacgatcacaatagcgaataaaggtgcggacagatactattcaaaaattcaagaagcctttgcagccattgatatctcaagcaataaatttgaagggaagattgatgaactgattgggaatctaaaagggcttcgctcgctcaatgtttccaataacattttcaccggtgagatcccatcatctttgggaaacttaacactgctggaggcattggacctttcacggaacaagctgtcaggagagatcccccaacagctggcgcagctgacattcctttcacaattcaatgctgctcacaacaggctcacaggtcctataccccaaggaaaccaatttgctacgttcaatagcacttcctatgagggaaaccctggattatgtggagatccgttgccaaccaaatgtggaaacccaacggcccatcaactgcctcctccaactgtacaagatgcttattcttccgagtccagaattgaatggatatttgttgtggcaggacttggaagtggtttggtgcagggaataattcttgcggatcttatgatcagaaggaggtatgcattgtttcttaaaattgttgacacgcttgtcagaacagtgaaaaggagaaggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8

Protein Analysis

975

Amino Acids

108.2

Weight (kDa)

5.19

Isoelectric Point (pI)

42.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1215, 1944
AarI CACCTGC 1 cut(s) 59
AasI GACNNNNNNGTC 1 cut(s) 2900
Acc16I TGCGCA 1 cut(s) 2147
Acc36I ACCTGC 1 cut(s) 59
AccB7I CCANNNNNTGG 1 cut(s) 2569
AccII CGCG 1 cut(s) 29
AccIII TCCGGA 1 cut(s) 935
AciI CCGC 7 cut(s) 29, 32, 421, 1083, 1238, 2339, 2846
AclWI GGATC 4 cut(s) 2479, 2551, 2693, 2856
AcoI YGGCCR 1 cut(s) 544
AcuI CTGAAG 5 cut(s) 419, 579, 1168, 1265, 1822
AfaI GTAC 9 cut(s) 346, 915, 1141, 1286, 1303, 1499, 1530, 1571, 2757
AfiI CCNNNNNNNGG 4 cut(s) 1630, 1884, 1954, 2569
AflII CTTAAG 1 cut(s) 1468
AflIII ACRYGT 1 cut(s) 1665
AgeI ACCGGT 1 cut(s) 2477
AjnI CCWGG 1 cut(s) 2683
AjuI GAANNNNNNNTTGG 8 cut(s) 1081, 1113, 1407, 1439, 1875, 1907, 2456, 2488
AleI CACNNNNGTG 1 cut(s) 1394
Alw21I GWGCWC 1 cut(s) 209
Alw26I GTCTC 1 cut(s) 1991
AlwI GGATC 4 cut(s) 2479, 2551, 2693, 2856
AlwNI CAGNNNCTG 2 cut(s) 312, 442
Aor13HI TCCGGA 1 cut(s) 935
AoxI GGCC 4 cut(s) 361, 544, 1779, 2730
ApeKI GCWGC 5 cut(s) 217, 309, 2375, 2575, 2603
ArsI GACNNNNNNTTYG 2 cut(s) 272, 304
AsiGI ACCGGT 1 cut(s) 2477
AspLEI GCGC 3 cut(s) 2085, 2148, 2575
AspS9I GGNCC 7 cut(s) 1085, 1157, 1676, 1780, 2527, 2624, 2731
AsuHPI GGTGA 8 cut(s) 28, 86, 98, 1740, 2062, 2192, 2467, 2492
AvaII GGWCC 5 cut(s) 1085, 1157, 1676, 2527, 2624
BalI TGGCCA 1 cut(s) 546
BanII GRGCYC 1 cut(s) 209
BbsI GAAGAC 3 cut(s) 30, 2026, 2264
Bbv12I GWGCWC 1 cut(s) 209
BbvI GCAGC 5 cut(s) 204, 296, 2387, 2587, 2590
BceAI ACGGC 1 cut(s) 2745
BciT130I CCWGG 1 cut(s) 2685
BclI TGATCA 4 cut(s) 43, 337, 1582, 2856
BcoDI GTCTC 1 cut(s) 1991
BfaI CTAG 5 cut(s) 681, 701, 927, 1202, 1427
BfmI CTRYAG 1 cut(s) 183
BfrI CTTAAG 1 cut(s) 1468
BfuAI ACCTGC 1 cut(s) 59
BglII AGATCT 3 cut(s) 248, 859, 2155
BisI GCNGC 6 cut(s) 30, 218, 310, 2376, 2576, 2604
BlsI GCNGC 6 cut(s) 31, 219, 311, 2377, 2577, 2605
Bme1390I CCNGG 1 cut(s) 2685
Bme18I GGWCC 5 cut(s) 1085, 1157, 1676, 2527, 2624
BmgT120I GGNCC 7 cut(s) 1085, 1157, 1676, 1780, 2527, 2624, 2731
BmiI GGNNCC 2 cut(s) 394, 1020
BmrFI CCNGG 1 cut(s) 2685
BmrI ACTGGG 2 cut(s) 562, 797
BmsI GCATC 6 cut(s) 986, 1412, 1563, 1980, 2266, 2752
BmuI ACTGGG 2 cut(s) 562, 797
BpiI GAAGAC 3 cut(s) 30, 2026, 2264
BplI GAGNNNNNCTC 2 cut(s) 191, 223
BpmI CTGGAG 2 cut(s) 1599, 2537
Bpu10I CCTNAGC 1 cut(s) 509
BpuEI CTTGAG 5 cut(s) 1286, 1825, 1942, 2015, 2374
Bsa29I ATCGAT 1 cut(s) 1557
BsaAI YACGTR 1 cut(s) 355
BsaJI CCNNGG 8 cut(s) 738, 1628, 1672, 1882, 1967, 2098, 2635, 2683
BsaWI WCCGGW 2 cut(s) 935, 2477
Bsc4I CCNNNNNNNGG 4 cut(s) 1630, 1884, 1954, 2569
Bse118I RCCGGY 1 cut(s) 2477
Bse1I ACTGG 6 cut(s) 568, 803, 817, 871, 1616, 2242
Bse3DI GCAATG 1 cut(s) 2085
BseAI TCCGGA 1 cut(s) 935
BseBI CCWGG 1 cut(s) 2685
BseCI ATCGAT 1 cut(s) 1557
BseDI CCNNGG 8 cut(s) 738, 1628, 1672, 1882, 1967, 2098, 2635, 2683
BseGI GGATG 9 cut(s) 130, 202, 328, 584, 647, 761, 1001, 1545, 1932
BseLI CCNNNNNNNGG 4 cut(s) 1630, 1884, 1954, 2569
BseMI GCAATG 1 cut(s) 2085
BseMII CTCAG 6 cut(s) 385, 523, 764, 1286, 1757, 2199
BseNI ACTGG 6 cut(s) 568, 803, 817, 871, 1616, 2242
BseRI GAGGAG 5 cut(s) 75, 78, 104, 215, 2736
BseXI GCAGC 5 cut(s) 204, 296, 2387, 2587, 2590
BsgI GTGCAG 1 cut(s) 2849
Bsh1236I CGCG 1 cut(s) 29
BshFI GGCC 4 cut(s) 363, 546, 1781, 2732
BshTI ACCGGT 1 cut(s) 2477
BshVI ATCGAT 1 cut(s) 1557
BsiHKAI GWGCWC 1 cut(s) 209
BsiSI CCGG 2 cut(s) 936, 2478
BslFI GGGAC 1 cut(s) 536
BslI CCNNNNNNNGG 4 cut(s) 1630, 1884, 1954, 2569
BsmAI GTCTC 1 cut(s) 1991
BsmFI GGGAC 1 cut(s) 536
BsmI GAATGC 1 cut(s) 1405
BsnI GGCC 4 cut(s) 363, 546, 1781, 2732
Bsp1286I GDGCHC 1 cut(s) 209
Bsp13I TCCGGA 1 cut(s) 935
Bsp1407I TGTACA 1 cut(s) 2755
Bsp19I CCATGG 3 cut(s) 738, 1672, 2098
BspACI CCGC 7 cut(s) 29, 32, 421, 1083, 1238, 2339, 2846
BspANI GGCC 4 cut(s) 363, 546, 1781, 2732
BspCNI CTCAG 6 cut(s) 384, 522, 765, 1287, 1758, 2200
BspDI ATCGAT 1 cut(s) 1557
BspEI TCCGGA 1 cut(s) 935
BspFNI CGCG 1 cut(s) 29
BspLI GGNNCC 2 cut(s) 394, 1020
BspMAI CTGCAG 1 cut(s) 187
BspMI ACCTGC 1 cut(s) 59
BspPI GGATC 4 cut(s) 2479, 2551, 2693, 2856
BspTI CTTAAG 1 cut(s) 1468
BsrDI GCAATG 1 cut(s) 2085
BsrFI RCCGGY 1 cut(s) 2477
BsrGI TGTACA 1 cut(s) 2755
BsrI ACTGG 6 cut(s) 568, 803, 817, 871, 1616, 2242
BssAI RCCGGY 1 cut(s) 2477
BssECI CCNNGG 8 cut(s) 738, 1628, 1672, 1882, 1967, 2098, 2635, 2683
BssT1I CCWWGG 6 cut(s) 738, 1628, 1672, 1882, 2098, 2635
Bst2UI CCWGG 1 cut(s) 2685
Bst6I CTCTTC 5 cut(s) 140, 422, 972, 1663, 2061
BstAFI CTTAAG 1 cut(s) 1468
BstAUI TGTACA 1 cut(s) 2755
BstBAI YACGTR 1 cut(s) 355
BstC8I GCNNGC 7 cut(s) 34, 183, 661, 1814, 1977, 2450, 2571
BstDEI CTNAG 9 cut(s) 371, 509, 773, 839, 1040, 1295, 1705, 1766, 2208
BstDSI CCRYGG 3 cut(s) 738, 1672, 2098
BstF5I GGATG 9 cut(s) 130, 202, 328, 584, 647, 761, 1001, 1545, 1932
BstFNI CGCG 1 cut(s) 29
BstHHI GCGC 3 cut(s) 2085, 2148, 2575
BstMAI GTCTC 1 cut(s) 1991
BstMWI GCNNNNNNNGC 4 cut(s) 1045, 2375, 2449, 2575
BstNI CCWGG 1 cut(s) 2685
BstNSI RCATGY 1 cut(s) 1669
BstSCI CCNGG 1 cut(s) 2683
BstSFI CTRYAG 1 cut(s) 183
BstUI CGCG 1 cut(s) 29
BstV1I GCAGC 5 cut(s) 204, 296, 2387, 2587, 2590
BstV2I GAAGAC 3 cut(s) 30, 2026, 2264
BstX2I RGATCY 7 cut(s) 248, 859, 2155, 2484, 2556, 2698, 2848
BstXI CCANNNNNNTGG 1 cut(s) 1358
BstYI RGATCY 7 cut(s) 248, 859, 2155, 2484, 2556, 2698, 2848
Bsu15I ATCGAT 1 cut(s) 1557
BsuRI GGCC 4 cut(s) 363, 546, 1781, 2732
BsuTUI ATCGAT 1 cut(s) 1557
BtgI CCRYGG 3 cut(s) 738, 1672, 2098
BtsCI GGATG 9 cut(s) 130, 202, 328, 584, 647, 761, 1001, 1545, 1932
BtsI GCAGTG 2 cut(s) 1679, 2510
BtsIMutI CAGTG 7 cut(s) 1311, 1380, 1679, 1822, 1846, 2510, 2916
BveI ACCTGC 1 cut(s) 59
Cac8I GCNNGC 7 cut(s) 34, 183, 661, 1814, 1977, 2450, 2571
CaiI CAGNNNCTG 2 cut(s) 312, 442
CfoI GCGC 3 cut(s) 2085, 2148, 2575
Cfr10I RCCGGY 1 cut(s) 2477
Cfr13I GGNCC 7 cut(s) 1085, 1157, 1676, 1780, 2527, 2624, 2731
ClaI ATCGAT 1 cut(s) 1557
CseI GACGC 1 cut(s) 35
Csp6I GTAC 9 cut(s) 345, 914, 1140, 1285, 1302, 1498, 1529, 1570, 2756
CspAI ACCGGT 1 cut(s) 2477
CspCI CAANNNNNGTGG 2 cut(s) 1789, 1824
CviAII CATG 7 cut(s) 318, 739, 1440, 1666, 1673, 2099, 2218
CviQI GTAC 9 cut(s) 345, 914, 1140, 1285, 1302, 1498, 1529, 1570, 2756
DdeI CTNAG 9 cut(s) 371, 509, 773, 839, 1040, 1295, 1705, 1766, 2208
DraI TTTAAA 1 cut(s) 1650
DrdI GACNNNNNNGTC 1 cut(s) 2900
DseDI GACNNNNNNGTC 1 cut(s) 2900
EaeI YGGCCR 1 cut(s) 544
Eam1104I CTCTTC 5 cut(s) 140, 422, 972, 1663, 2061
EarI CTCTTC 5 cut(s) 140, 422, 972, 1663, 2061
EciI GGCGGA 1 cut(s) 410
Ecl136II GAGCTC 1 cut(s) 207
Eco130I CCWWGG 6 cut(s) 738, 1628, 1672, 1882, 2098, 2635
Eco24I GRGCYC 1 cut(s) 209
Eco32I GATATC 2 cut(s) 1475, 2386
Eco47I GGWCC 5 cut(s) 1085, 1157, 1676, 2527, 2624
Eco53kI GAGCTC 1 cut(s) 207
Eco57I CTGAAG 5 cut(s) 419, 579, 1168, 1265, 1822
EcoICRI GAGCTC 1 cut(s) 207
EcoO109I RGGNCCY 2 cut(s) 1780, 2624
EcoRI GAATTC 2 cut(s) 797, 881
EcoRII CCWGG 1 cut(s) 2683
EcoRV GATATC 2 cut(s) 1475, 2386
EcoT14I CCWWGG 6 cut(s) 738, 1628, 1672, 1882, 2098, 2635
EcoT22I ATGCAT 2 cut(s) 1405, 2875
EcoT38I GRGCYC 1 cut(s) 209
ErhI CCWWGG 6 cut(s) 738, 1628, 1672, 1882, 2098, 2635
FaeI CATG 7 cut(s) 321, 742, 1443, 1669, 1676, 2102, 2221
FalI AAGNNNNNCTT 4 cut(s) 218, 250, 1875, 1907
FaqI GGGAC 1 cut(s) 536
FatI CATG 7 cut(s) 317, 738, 1439, 1665, 1672, 2098, 2217
FauI CCCGC 1 cut(s) 25
FbaI TGATCA 4 cut(s) 43, 337, 1582, 2856
Fnu4HI GCNGC 6 cut(s) 30, 218, 310, 2376, 2576, 2604
FokI GGATG 9 cut(s) 137, 209, 335, 571, 634, 748, 1008, 1552, 1939
FriOI GRGCYC 1 cut(s) 209
Fsp4HI GCNGC 6 cut(s) 30, 218, 310, 2376, 2576, 2604
FspBI CTAG 5 cut(s) 681, 701, 927, 1202, 1427
FspI TGCGCA 1 cut(s) 2147
GlaI GCGC 3 cut(s) 2084, 2147, 2574
GluI GCNGC 6 cut(s) 30, 218, 310, 2376, 2576, 2604
GsuI CTGGAG 2 cut(s) 1599, 2537
HaeIII GGCC 4 cut(s) 363, 546, 1781, 2732
HapII CCGG 2 cut(s) 936, 2478
HgaI GACGC 1 cut(s) 35
HhaI GCGC 3 cut(s) 2085, 2148, 2575
Hin1II CATG 7 cut(s) 321, 742, 1443, 1669, 1676, 2102, 2221
Hin6I GCGC 3 cut(s) 2083, 2146, 2573
HinP1I GCGC 3 cut(s) 2083, 2146, 2573
HincII GTYRAC 4 cut(s) 1636, 2239, 2247, 2893
HindII GTYRAC 4 cut(s) 1636, 2239, 2247, 2893
HindIII AAGCTT 3 cut(s) 232, 962, 1037
HpaI GTTAAC 1 cut(s) 1636
HpaII CCGG 2 cut(s) 936, 2478
HphI GGTGA 8 cut(s) 28, 86, 98, 1740, 2062, 2192, 2467, 2492
Hpy166II GTNNAC 4 cut(s) 1636, 2239, 2247, 2893
Hpy8I GTNNAC 4 cut(s) 1636, 2239, 2247, 2893
HpyAV CCTTC 9 cut(s) 122, 957, 1004, 1634, 1649, 1888, 2399, 2856, 2916
HpyCH4IV ACGT 2 cut(s) 354, 2654
HpyF10VI GCNNNNNNNGC 4 cut(s) 1045, 2375, 2449, 2575
HpyF3I CTNAG 9 cut(s) 371, 509, 773, 839, 1040, 1295, 1705, 1766, 2208
HpySE526I ACGT 2 cut(s) 354, 2654
Hsp92II CATG 7 cut(s) 321, 742, 1443, 1669, 1676, 2102, 2221
HspAI GCGC 3 cut(s) 2083, 2146, 2573
Kpn2I TCCGGA 1 cut(s) 935
Ksp22I TGATCA 4 cut(s) 43, 337, 1582, 2856
KspAI GTTAAC 1 cut(s) 1636
LmnI GCTCC 2 cut(s) 65, 398
Lsp1109I GCAGC 5 cut(s) 204, 296, 2387, 2587, 2590
LweI GCATC 6 cut(s) 986, 1412, 1563, 1980, 2266, 2752
MaeI CTAG 5 cut(s) 681, 701, 927, 1202, 1427
MaeII ACGT 2 cut(s) 354, 2654
MaeIII GTNAC 6 cut(s) 350, 819, 1145, 1841, 2050, 2309
MfeI CAATTG 4 cut(s) 785, 1118, 1392, 1949
MflI RGATCY 7 cut(s) 248, 859, 2155, 2484, 2556, 2698, 2848
MhlI GDGCHC 1 cut(s) 209
MlsI TGGCCA 1 cut(s) 546
MluNI TGGCCA 1 cut(s) 546
MlyI GAGTC 3 cut(s) 1153, 2047, 2786
MmeI TCCRAC 5 cut(s) 153, 429, 1686, 1818, 2774
Mox20I TGGCCA 1 cut(s) 546
Mph1103I ATGCAT 2 cut(s) 1405, 2875
MroI TCCGGA 1 cut(s) 935
MscI TGGCCA 1 cut(s) 546
MslI CAYNNNNRTG 2 cut(s) 1356, 1394
Msp20I TGGCCA 1 cut(s) 546
MspA1I CMGCKG 3 cut(s) 309, 2569, 2578
MspCI CTTAAG 1 cut(s) 1468
MspI CCGG 2 cut(s) 936, 2478
MspR9I CCNGG 1 cut(s) 2685
MunI CAATTG 4 cut(s) 785, 1118, 1392, 1949
Mva1269I GAATGC 1 cut(s) 1405
MvaI CCWGG 1 cut(s) 2685
MvnI CGCG 1 cut(s) 29
MwoI GCNNNNNNNGC 4 cut(s) 1045, 2375, 2449, 2575
NcoI CCATGG 3 cut(s) 738, 1672, 2098
NlaIII CATG 7 cut(s) 321, 742, 1443, 1669, 1676, 2102, 2221
NlaIV GGNNCC 2 cut(s) 394, 1020
NmuCI GTSAC 3 cut(s) 1145, 1841, 2050
NsbI TGCGCA 1 cut(s) 2147
NsiI ATGCAT 2 cut(s) 1405, 2875
NspI RCATGY 1 cut(s) 1669
OliI CACNNNNGTG 1 cut(s) 1394
PaqCI CACCTGC 1 cut(s) 59
PciI ACATGT 1 cut(s) 1665
PcsI WCGNNNNNNNCGW 1 cut(s) 33
PctI GAATGC 1 cut(s) 1405
PfeI GAWTC 8 cut(s) 496, 604, 968, 1097, 1270, 1385, 1888, 2431
PflMI CCANNNNNTGG 1 cut(s) 2569
PinAI ACCGGT 1 cut(s) 2477
PkrI GCNGC 6 cut(s) 31, 219, 311, 2377, 2577, 2605
PleI GAGTC 3 cut(s) 1152, 2047, 2785
PpsI GAGTC 3 cut(s) 1152, 2047, 2785
Ppu21I YACGTR 1 cut(s) 355
PpuMI RGGWCCY 1 cut(s) 2624
PscI ACATGT 1 cut(s) 1665
PsiI TTATAA 2 cut(s) 1215, 1944
Psp124BI GAGCTC 1 cut(s) 209
Psp5II RGGWCCY 1 cut(s) 2624
Psp6I CCWGG 1 cut(s) 2683
PspGI CCWGG 1 cut(s) 2683
PspN4I GGNNCC 2 cut(s) 394, 1020
PspPI GGNCC 7 cut(s) 1085, 1157, 1676, 1780, 2527, 2624, 2731
PspPPI RGGWCCY 1 cut(s) 2624
PstI CTGCAG 1 cut(s) 187
PstNI CAGNNNCTG 2 cut(s) 312, 442
PsuI RGATCY 7 cut(s) 248, 859, 2155, 2484, 2556, 2698, 2848
PvuII CAGCTG 3 cut(s) 309, 2569, 2578
RsaI GTAC 9 cut(s) 346, 915, 1141, 1286, 1303, 1499, 1530, 1571, 2757
RsaNI GTAC 9 cut(s) 345, 914, 1140, 1285, 1302, 1498, 1529, 1570, 2756
RseI CAYNNNNRTG 2 cut(s) 1356, 1394
SacI GAGCTC 1 cut(s) 209
SatI GCNGC 6 cut(s) 30, 218, 310, 2376, 2576, 2604
Sau96I GGNCC 7 cut(s) 1085, 1157, 1676, 1780, 2527, 2624, 2731
SchI GAGTC 3 cut(s) 1153, 2047, 2786
ScrFI CCNGG 1 cut(s) 2685
SduI GDGCHC 1 cut(s) 209
SfaNI GCATC 6 cut(s) 986, 1412, 1563, 1980, 2266, 2752
SfcI CTRYAG 1 cut(s) 183
SgrAI CRCCGGYG 1 cut(s) 2477
SinI GGWCC 5 cut(s) 1085, 1157, 1676, 2527, 2624
SmiMI CAYNNNNRTG 2 cut(s) 1356, 1394
SmlI CTYRAG 6 cut(s) 1265, 1468, 1804, 1921, 1994, 2389
SmoI CTYRAG 6 cut(s) 1265, 1468, 1804, 1921, 1994, 2389
SsiI CCGC 7 cut(s) 29, 32, 421, 1083, 1238, 2339, 2846
SspMI CTAG 5 cut(s) 681, 701, 927, 1202, 1427
SstI GAGCTC 1 cut(s) 209
StyD4I CCNGG 1 cut(s) 2683
StyI CCWWGG 6 cut(s) 738, 1628, 1672, 1882, 2098, 2635
TaiI ACGT 2 cut(s) 357, 2657
TaqI TCGA 7 cut(s) 21, 108, 330, 722, 1059, 1557, 1642
TatI WGTACW 3 cut(s) 1284, 1569, 2755
TauI GCSGC 1 cut(s) 32
TfiI GAWTC 8 cut(s) 496, 604, 968, 1097, 1270, 1385, 1888, 2431
TscAI CASTG 7 cut(s) 1311, 1387, 1686, 1829, 1846, 2517, 2916
TseFI GTSAC 3 cut(s) 1145, 1841, 2050
TseI GCWGC 5 cut(s) 217, 309, 2375, 2575, 2603
Tsp45I GTSAC 3 cut(s) 1145, 1841, 2050
TspDTI ATGAA 8 cut(s) 93, 141, 306, 659, 1428, 1728, 2270, 2433
TspGWI ACGGA 2 cut(s) 2551, 2691
TspRI CASTG 7 cut(s) 1311, 1387, 1686, 1829, 1846, 2517, 2916
Van91I CCANNNNNTGG 1 cut(s) 2569
Vha464I CTTAAG 1 cut(s) 1468
VpaK11BI GGWCC 5 cut(s) 1085, 1157, 1676, 2527, 2624
XceI RCATGY 1 cut(s) 1669
XcmI CCANNNNNNNNNTGG 1 cut(s) 1167
XspI CTAG 5 cut(s) 681, 701, 927, 1202, 1427
Zsp2I ATGCAT 2 cut(s) 1405, 2875
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.