Rmu_sc0005144.1_g000016

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005144.1
OG0000024
Physical Location & Seq
Forward (+)
69332 .. 74281
4950 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005144.1_g000016.1.cds

Sequence Viewer

Length: 3156 bp
atggttacgttcttgaagaaatgttatgcaatgagtcccactaggcgtgccaaaatgtttggcacaaaaaccagttggcttgcaaactgtctcttttgctgctgtgattgcgcgggtgtgccagcaccgtggggtgcagtcgttggggaatcccttgacctggcttcttctgcaaacattgtggacgaggagagcactaacctcgtcacaaggctcttttctatgccttccgaaaaaagacttcttgccttactgccatcttgccatgaggaagagggcaccgccttgctgcaatttaagcaaagctttactattgatacttctgcttctggttatgatggtgcttactcaaaggtctcatcatggcaaacggctgaaggagaaactagcaactgctgctcatgggacggcattggttgtgatgagaggactggtcgtgtgattgacatagatcttagtagcagttatctctatgggaacctcaactccaacagcaccctctttcgtcttgttcatctccagaggctgaaccttgctcacaacaacttcaatcactctcaaattcctactacacttgggaattttccgacgctcaggtatctcaacctttcctcctctgtcttttctggccatgtaccatccgaagtttcacaattgtccaaattgtcatcccttgacctgtctgccaatacactttcgagtcagggactgttgaaactagcaccatccaatctggcaggcctagtgcaaaacttaactagtcttgaaacactttatctcagtggcattaacatttcttcgagaattcctgattccgtgggaaatttgtcatttttgacatccctcgctctgaggaattgtgagttgtttggtcaattcccaactagaattttcaagttgcagaatttaaaatttttcagtgtgagattcaaccacgagctctctggttatctacctgaattcaatcaaagcagtccactgaccagaataatacttgccggcactaatttttcgggaaacctaccttcatcaattggaaagcttgattcattgaaagacttggatgtgggtgcatgcagattctccgggatgcttcctttttcacttggtaatcttaaacagctcaattatttagacctttcaactaacacatttagtggtccaattcctgcttcactggcaaaccttacccaactcacatatttgtcactcgcaacaaataattttgttcgaggtccctcattttgggttggtaagcaaaccaaacttacttttctcgacctcgaaagcattaatttaaatggttctatcccatcttctcttagtaacttcacacagctcacttatctttctcttcgatctaatcaactaagtggtccaatcccatcttggctaggtaaccttagcaaactagtcaccatagattttgttgtgaacagtttgaagggttcagttcctttatcattattcgatcttatggagctcgagcagctttctctatctgtgaatgagctacatgggaacgtggacttttgtaagctacaaagtgtcatgaaagtcctccaactcggtggtaacaaactcgaagtgctcagtgaatgtgaaatgaagaatacaaccatatttccacagctcagttatctaggattgagttcgtgcaacataaaagagtttccacatttcctaatgcatcaacaaagcttgaggtggttggacctttctttgaacaaattgcgtggtcaaataccaaaatggatgtggaatacaagcacgcaaagtttggctttcctgaacatcaagcaaaacttcctttcaggctttggccaaccaactcttgtccttccttgggttaacctacaagctttatttgctgcgggtaacctgctaattggatcactacccatacctccagaatacattgtatactattcagtaagtgacaacaaatttacaggagaaatttcgccatcaatttgcaagctgagatctcttcaataccttgacttatcaaataacaagttaagtggcaccattccgcaatgtcttggaaactttagtgatgatctacgagttttgaatcttcgaaacaactctttacaaggcattcttccgcaaccatacagcaatgcaagcaacttgaggatgatagacgttagttacaaccaattccacgggcaattaccgaggtcactggcgaattgtgcgatgctcgactctcttgttctatccaataatgagttcaacgatgatttccccatctggttgggaatgctcccagatttgaaacttttggcaatgaaccataatgagttcaacggtgtgatcaagaatagcacaaaaaatcttcattttcccgagttgctcattcttgatctgtctcacaatagtttcagaggtgagtttccatcagtcatcttttctggaaatgccatgagaggtatagctcagagccaaccaacatatatggatacaagttcagctctcaatatccctggtgcacctttgtttggttatggtttctcaatgacaattacaaataaaggtatggagagatactacgagaagattcgtgaagaccttgggtttgttgatatttcaagcaacaaatttgcaggaaagattccagaatttattgggaacctgaaagggcttcggtttctcaatatttcccataacattttcagtgggtccatcccatcatctttgggtaacttaatactgctcgagtcattggacctgtcacagaacaagcttgctggagaaattcctcagaaactcgcgcagcttacatcccttgcatatttcaatgtctctcacaacaatctcacaggttccataccgcaagggcgccaatttcatacatttgagagctcttcatatgagggaaactctggactctgtggagacccattgccaaagaaatgtgggaattctaatgctccatctcaactaccaccttcaagcattgaagaaaatgattcaggctctggagttgaacttgattggatatttatactggctggatttggaagtgggttggtagtgggagtggtacttgcaaatgaggggatcaaatggaggcgtgagttgtttcttgagatggttgggatgttaatcagactactgaaaaggatcagaaggcagaggaggaattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1051

Amino Acids

115.88

Weight (kDa)

7.48

Isoelectric Point (pI)

43.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1890
AccB1I GGYRCC 3 cut(s) 278, 2027, 2847
AccI GTMKAC 1 cut(s) 1923
AccII CGCG 2 cut(s) 113, 2780
AciI CCGC 6 cut(s) 113, 282, 1874, 2036, 2111, 2840
AclWI GGATC 3 cut(s) 1900, 3077, 3140
AcoI YGGCCR 2 cut(s) 628, 1822
AcuI CTGAAG 1 cut(s) 396
AcyI GRCGYC 1 cut(s) 2848
AfaI GTAC 2 cut(s) 636, 3054
AfiI CCNNNNNNNGG 4 cut(s) 160, 1245, 1846, 2507
AhlI ACTAGT 2 cut(s) 758, 1411
AjnI CCWGG 2 cut(s) 159, 2491
AjuI GAANNNNNNNTTGG 4 cut(s) 1156, 1188, 2222, 2254
AloI GAACNNNNNNTCC 2 cut(s) 470, 502
Alw21I GWGCWC 6 cut(s) 197, 942, 1485, 1593, 2500, 2873
Alw26I GTCTC 5 cut(s) 95, 361, 2382, 2815, 2898
Alw44I GTGCAC 1 cut(s) 2496
AlwI GGATC 3 cut(s) 1900, 3077, 3140
AlwNI CAGNNNCTG 3 cut(s) 526, 709, 2987
Ama87I CYCGRG 3 cut(s) 1484, 2354, 2723
AoxI GGCC 3 cut(s) 628, 739, 1822
ApaLI GTGCAC 1 cut(s) 2496
ApeKI GCWGC 6 cut(s) 99, 289, 396, 1489, 1871, 2782
ArsI GACNNNNNNTTYG 2 cut(s) 2567, 2599
AseI ATTAAT 1 cut(s) 1293
AspLEI GCGC 3 cut(s) 113, 2782, 2850
AspS9I GGNCC 6 cut(s) 1160, 1235, 1376, 1714, 2688, 2734
AsuC2I CCSGG 1 cut(s) 1087
AsuHPI GGTGA 2 cut(s) 1408, 2408
AsuII TTCGAA 1 cut(s) 2083
AvaI CYCGRG 3 cut(s) 1484, 2354, 2723
AvaII GGWCC 6 cut(s) 1160, 1235, 1376, 1714, 2688, 2734
BaeGI GKGCMC 2 cut(s) 281, 2500
BalI TGGCCA 2 cut(s) 630, 1824
BanI GGYRCC 3 cut(s) 278, 2027, 2847
BanII GRGCYC 3 cut(s) 942, 1485, 2873
BauI CACGAG 1 cut(s) 935
BbsI GAAGAC 1 cut(s) 2580
Bbv12I GWGCWC 6 cut(s) 197, 942, 1485, 1593, 2500, 2873
BbvI GCAGC 6 cut(s) 86, 276, 383, 1501, 1858, 2794
BceAI ACGGC 2 cut(s) 387, 424
BcgI CGANNNNNNTGC 2 cut(s) 184, 218
BciT130I CCWGG 2 cut(s) 161, 2493
BciVI GTATCC 1 cut(s) 2461
BclI TGATCA 1 cut(s) 2322
BcnI CCSGG 1 cut(s) 1087
BcoDI GTCTC 5 cut(s) 95, 361, 2382, 2815, 2898
BcuI ACTAGT 2 cut(s) 758, 1411
BfaI CTAG 9 cut(s) 42, 387, 719, 743, 759, 885, 1394, 1412, 1643
BfoI RGCGCY 1 cut(s) 2851
BfuAI ACCTGC 1 cut(s) 1890
BfuI GTATCC 1 cut(s) 2461
BglII AGATCT 2 cut(s) 451, 1985
BisI GCNGC 6 cut(s) 100, 290, 397, 1490, 1872, 2783
BlsI GCNGC 6 cut(s) 101, 291, 398, 1491, 1873, 2784
Bme1390I CCNGG 3 cut(s) 161, 1087, 2493
Bme18I GGWCC 6 cut(s) 1160, 1235, 1376, 1714, 2688, 2734
BmeT110I CYCGRG 3 cut(s) 1484, 2354, 2723
BmgT120I GGNCC 6 cut(s) 1160, 1235, 1376, 1714, 2688, 2734
BmiI GGNNCC 8 cut(s) 280, 479, 1237, 2029, 2639, 2689, 2833, 2849
BmrFI CCNGG 3 cut(s) 161, 1087, 2493
BmsI GCATC 3 cut(s) 1080, 1699, 2196
BpiI GAAGAC 1 cut(s) 2580
BplI GAGNNNNNCTC 2 cut(s) 2873, 2905
BpmI CTGGAG 4 cut(s) 503, 1893, 2778, 3009
Bpu10I CCTNAGC 2 cut(s) 593, 1403
Bpu14I TTCGAA 1 cut(s) 2083
BpuEI CTTGAG 3 cut(s) 1723, 2158, 3116
BpuMI CCSGG 1 cut(s) 1087
BsaBI GATNNNNATC 1 cut(s) 3113
BsaHI GRCGYC 1 cut(s) 2848
BsaI GGTCTC 2 cut(s) 361, 2898
BsaJI CCNNGG 7 cut(s) 128, 816, 1844, 2170, 2183, 2491, 2578
BsaXI ACNNNNNCTCC 4 cut(s) 470, 500, 596, 626
Bsc4I CCNNNNNNNGG 4 cut(s) 160, 1245, 1846, 2507
Bse118I RCCGGY 1 cut(s) 998
Bse1I ACTGG 5 cut(s) 72, 436, 1182, 2196, 3021
Bse3DI GCAATG 5 cut(s) 36, 2045, 2131, 2301, 2909
Bse8I GATNNNNATC 1 cut(s) 3113
BseBI CCWGG 2 cut(s) 161, 2493
BseDI CCNNGG 7 cut(s) 128, 816, 1844, 2170, 2183, 2491, 2578
BseJI GATNNNNATC 1 cut(s) 3113
BseLI CCNNNNNNNGG 4 cut(s) 160, 1245, 1846, 2507
BseMI GCAATG 5 cut(s) 36, 2045, 2131, 2301, 2909
BseMII CTCAG 8 cut(s) 607, 793, 842, 1606, 1648, 1973, 2459, 2783
BseNI ACTGG 5 cut(s) 72, 436, 1182, 2196, 3021
BseRI GAGGAG 2 cut(s) 203, 604
BseSI GKGCMC 2 cut(s) 281, 2500
BseXI GCAGC 6 cut(s) 86, 276, 383, 1501, 1858, 2794
BsgI GTGCAG 1 cut(s) 156
Bsh1236I CGCG 2 cut(s) 113, 2780
BshFI GGCC 3 cut(s) 630, 741, 1824
BshNI GGYRCC 3 cut(s) 278, 2027, 2847
BsiHKAI GWGCWC 6 cut(s) 197, 942, 1485, 1593, 2500, 2873
BsiHKCI CYCGRG 3 cut(s) 1484, 2354, 2723
BsiSI CCGG 2 cut(s) 999, 1086
BslFI GGGAC 4 cut(s) 21, 419, 720, 1221
BslI CCNNNNNNNGG 4 cut(s) 160, 1245, 1846, 2507
BsmAI GTCTC 5 cut(s) 95, 361, 2382, 2815, 2898
BsmFI GGGAC 4 cut(s) 21, 419, 720, 1221
BsmI GAATGC 2 cut(s) 2103, 2274
BsnI GGCC 3 cut(s) 630, 741, 1824
Bso31I GGTCTC 2 cut(s) 361, 2898
BsoBI CYCGRG 3 cut(s) 1484, 2354, 2723
Bsp119I TTCGAA 1 cut(s) 2083
Bsp1286I GDGCHC 7 cut(s) 197, 281, 942, 1485, 1593, 2500, 2873
BspACI CCGC 6 cut(s) 113, 282, 1874, 2036, 2111, 2840
BspANI GGCC 3 cut(s) 630, 741, 1824
BspCNI CTCAG 8 cut(s) 606, 792, 843, 1605, 1647, 1974, 2458, 2782
BspFNI CGCG 2 cut(s) 113, 2780
BspHI TCATGA 1 cut(s) 1551
BspLI GGNNCC 8 cut(s) 280, 479, 1237, 2029, 2639, 2689, 2833, 2849
BspMI ACCTGC 1 cut(s) 1890
BspPI GGATC 3 cut(s) 1900, 3077, 3140
BspQI GCTCTTC 1 cut(s) 2878
BspT104I TTCGAA 1 cut(s) 2083
BspT107I GGYRCC 3 cut(s) 278, 2027, 2847
BspTNI GGTCTC 2 cut(s) 361, 2898
BsrDI GCAATG 5 cut(s) 36, 2045, 2131, 2301, 2909
BsrFI RCCGGY 1 cut(s) 998
BsrI ACTGG 5 cut(s) 72, 436, 1182, 2196, 3021
BssAI RCCGGY 1 cut(s) 998
BssECI CCNNGG 7 cut(s) 128, 816, 1844, 2170, 2183, 2491, 2578
BssNAI GTATAC 1 cut(s) 1924
BssNI GRCGYC 1 cut(s) 2848
BssSI CACGAG 1 cut(s) 935
BssT1I CCWWGG 2 cut(s) 1844, 2578
Bst1107I GTATAC 1 cut(s) 1924
Bst2BI CACGAG 1 cut(s) 935
Bst2UI CCWGG 2 cut(s) 161, 2493
Bst4CI ACNGT 5 cut(s) 89, 129, 711, 1439, 2318
Bst6I CTCTTC 4 cut(s) 267, 1359, 1995, 2878
BstACI GRCGYC 1 cut(s) 2848
BstAPI GCANNNNNTGC 1 cut(s) 396
BstBI TTCGAA 1 cut(s) 2083
BstDSI CCRYGG 3 cut(s) 128, 816, 2170
BstEII GGTNACC 2 cut(s) 1397, 1877
BstFNI CGCG 2 cut(s) 113, 2780
BstH2I RGCGCY 1 cut(s) 2851
BstHHI GCGC 3 cut(s) 113, 2782, 2850
BstMAI GTCTC 5 cut(s) 95, 361, 2382, 2815, 2898
BstMWI GCNNNNNNNGC 9 cut(s) 108, 170, 298, 396, 1178, 1489, 1868, 2130, 2201
BstNI CCWGG 2 cut(s) 161, 2493
BstNSI RCATGY 1 cut(s) 1077
BstPI GGTNACC 2 cut(s) 1397, 1877
BstSCI CCNGG 3 cut(s) 159, 1085, 2491
BstSLI GKGCMC 2 cut(s) 281, 2500
BstUI CGCG 2 cut(s) 113, 2780
BstV1I GCAGC 6 cut(s) 86, 276, 383, 1501, 1858, 2794
BstV2I GAAGAC 1 cut(s) 2580
BstX2I RGATCY 2 cut(s) 451, 1985
BstXI CCANNNNNNTGG 3 cut(s) 129, 1571, 2263
BstYI RGATCY 2 cut(s) 451, 1985
BstZ17I GTATAC 1 cut(s) 1924
BsuI GTATCC 1 cut(s) 2461
BsuRI GGCC 3 cut(s) 630, 741, 1824
BtgI CCRYGG 3 cut(s) 128, 816, 2170
BtgZI GCGATG 1 cut(s) 2219
BtsIMutI CAGTG 7 cut(s) 787, 925, 977, 1175, 1600, 2189, 2689
BveI ACCTGC 1 cut(s) 1890
CaiI CAGNNNCTG 3 cut(s) 526, 709, 2987
CciI TCATGA 1 cut(s) 1551
CfoI GCGC 3 cut(s) 113, 2782, 2850
Cfr10I RCCGGY 1 cut(s) 998
Cfr13I GGNCC 6 cut(s) 1160, 1235, 1376, 1714, 2688, 2734
CseI GACGC 1 cut(s) 598
Csp6I GTAC 2 cut(s) 635, 3053
CspCI CAANNNNNGTGG 6 cut(s) 162, 197, 1717, 1752, 2005, 2040
CviAII CATG 8 cut(s) 266, 363, 402, 632, 1074, 1517, 1552, 2431
CviQI GTAC 2 cut(s) 635, 3053
DinI GGCGCC 1 cut(s) 2849
DraI TTTAAA 2 cut(s) 909, 1299
EaeI YGGCCR 2 cut(s) 628, 1822
Eam1104I CTCTTC 4 cut(s) 267, 1359, 1995, 2878
EarI CTCTTC 4 cut(s) 267, 1359, 1995, 2878
Ecl136II GAGCTC 3 cut(s) 940, 1483, 2871
Eco130I CCWWGG 2 cut(s) 1844, 2578
Eco147I AGGCCT 1 cut(s) 741
Eco24I GRGCYC 3 cut(s) 942, 1485, 2873
Eco31I GGTCTC 2 cut(s) 361, 2898
Eco47I GGWCC 6 cut(s) 1160, 1235, 1376, 1714, 2688, 2734
Eco53kI GAGCTC 3 cut(s) 940, 1483, 2871
Eco57I CTGAAG 1 cut(s) 396
Eco88I CYCGRG 3 cut(s) 1484, 2354, 2723
Eco91I GGTNACC 2 cut(s) 1397, 1877
EcoICRI GAGCTC 3 cut(s) 940, 1483, 2871
EcoO109I RGGNCCY 1 cut(s) 1235
EcoO65I GGTNACC 2 cut(s) 1397, 1877
EcoRI GAATTC 3 cut(s) 804, 959, 2929
EcoRII CCWGG 2 cut(s) 159, 2491
EcoT14I CCWWGG 2 cut(s) 1844, 2578
EcoT22I ATGCAT 1 cut(s) 1692
EcoT38I GRGCYC 3 cut(s) 942, 1485, 2873
EgeI GGCGCC 1 cut(s) 2849
EheI GGCGCC 1 cut(s) 2849
ErhI CCWWGG 2 cut(s) 1844, 2578
FaeI CATG 8 cut(s) 269, 366, 405, 635, 1077, 1520, 1555, 2434
FalI AAGNNNNNCTT 8 cut(s) 290, 322, 1768, 1800, 1790, 1822, 2091, 2123
FaqI GGGAC 4 cut(s) 21, 419, 720, 1221
FatI CATG 8 cut(s) 265, 362, 401, 631, 1073, 1516, 1551, 2430
FauI CCCGC 2 cut(s) 106, 1867
FauNDI CATATG 1 cut(s) 2878
FbaI TGATCA 1 cut(s) 2322
FblI GTMKAC 1 cut(s) 1923
Fnu4HI GCNGC 6 cut(s) 100, 290, 397, 1490, 1872, 2783
FriOI GRGCYC 3 cut(s) 942, 1485, 2873
Fsp4HI GCNGC 6 cut(s) 100, 290, 397, 1490, 1872, 2783
FspBI CTAG 9 cut(s) 42, 387, 719, 743, 759, 885, 1394, 1412, 1643
GlaI GCGC 3 cut(s) 112, 2781, 2849
GluI GCNGC 6 cut(s) 100, 290, 397, 1490, 1872, 2783
GsuI CTGGAG 4 cut(s) 503, 1893, 2778, 3009
HaeII RGCGCY 1 cut(s) 2851
HaeIII GGCC 3 cut(s) 630, 741, 1824
HapII CCGG 2 cut(s) 999, 1086
HgaI GACGC 1 cut(s) 598
HhaI GCGC 3 cut(s) 113, 2782, 2850
Hin1I GRCGYC 1 cut(s) 2848
Hin1II CATG 8 cut(s) 269, 366, 405, 635, 1077, 1520, 1555, 2434
Hin6I GCGC 3 cut(s) 111, 2780, 2848
HinP1I GCGC 3 cut(s) 111, 2780, 2848
HincII GTYRAC 1 cut(s) 1852
HindII GTYRAC 1 cut(s) 1852
HindIII AAGCTT 5 cut(s) 304, 1040, 1699, 1860, 2750
HpaI GTTAAC 1 cut(s) 1852
HpaII CCGG 2 cut(s) 999, 1086
HphI GGTGA 2 cut(s) 1408, 2408
Hpy166II GTNNAC 7 cut(s) 184, 977, 1435, 1528, 1852, 1924, 2498
Hpy188I TCNGA 9 cut(s) 232, 588, 643, 852, 2393, 2448, 2772, 3119, 3137
Hpy8I GTNNAC 7 cut(s) 184, 977, 1435, 1528, 1852, 1924, 2498
Hpy99I CGWCG 1 cut(s) 592
HpyAV CCTTC 7 cut(s) 237, 371, 1035, 1438, 1850, 2967, 3132
HpyCH4III ACNGT 5 cut(s) 89, 129, 711, 1439, 2318
HpyCH4IV ACGT 3 cut(s) 8, 1524, 2151
HpyF10VI GCNNNNNNNGC 9 cut(s) 108, 170, 298, 396, 1178, 1489, 1868, 2130, 2201
HpySE526I ACGT 3 cut(s) 8, 1524, 2151
Hsp92I GRCGYC 1 cut(s) 2848
Hsp92II CATG 8 cut(s) 269, 366, 405, 635, 1077, 1520, 1555, 2434
HspAI GCGC 3 cut(s) 111, 2780, 2848
KasI GGCGCC 1 cut(s) 2847
KroI GCCGGC 1 cut(s) 998
KroNI GCCGGC 1 cut(s) 1000
Ksp22I TGATCA 1 cut(s) 2322
KspAI GTTAAC 1 cut(s) 1852
LguI GCTCTTC 1 cut(s) 2878
LmnI GCTCC 3 cut(s) 1480, 2277, 2944
Lsp1109I GCAGC 6 cut(s) 86, 276, 383, 1501, 1858, 2794
LweI GCATC 3 cut(s) 1080, 1699, 2196
MaeI CTAG 9 cut(s) 42, 387, 719, 743, 759, 885, 1394, 1412, 1643
MaeII ACGT 3 cut(s) 8, 1524, 2151
MfeI CAATTG 2 cut(s) 653, 1032
MflI RGATCY 2 cut(s) 451, 1985
MhlI GDGCHC 7 cut(s) 197, 281, 942, 1485, 1593, 2500, 2873
MlsI TGGCCA 2 cut(s) 630, 1824
MluNI TGGCCA 2 cut(s) 630, 1824
Mly113I GGCGCC 1 cut(s) 2848
MlyI GAGTC 5 cut(s) 43, 709, 2207, 2735, 2889
MmeI TCCRAC 4 cut(s) 513, 611, 1588, 1692
Mox20I TGGCCA 2 cut(s) 630, 1824
Mph1103I ATGCAT 1 cut(s) 1692
MroNI GCCGGC 1 cut(s) 998
MscI TGGCCA 2 cut(s) 630, 1824
Msp20I TGGCCA 2 cut(s) 630, 1824
MspI CCGG 2 cut(s) 999, 1086
MspR9I CCNGG 3 cut(s) 161, 1087, 2493
MunI CAATTG 2 cut(s) 653, 1032
Mva1269I GAATGC 2 cut(s) 2103, 2274
MvaI CCWGG 2 cut(s) 161, 2493
MvnI CGCG 2 cut(s) 113, 2780
MwoI GCNNNNNNNGC 9 cut(s) 108, 170, 298, 396, 1178, 1489, 1868, 2130, 2201
NaeI GCCGGC 1 cut(s) 1000
NarI GGCGCC 1 cut(s) 2848
NciI CCSGG 1 cut(s) 1087
NdeI CATATG 1 cut(s) 2878
NgoMIV GCCGGC 1 cut(s) 998
NlaIII CATG 8 cut(s) 269, 366, 405, 635, 1077, 1520, 1555, 2434
NlaIV GGNNCC 8 cut(s) 280, 479, 1237, 2029, 2639, 2689, 2833, 2849
NmuCI GTSAC 6 cut(s) 205, 1206, 1414, 1937, 2187, 2739
NsiI ATGCAT 1 cut(s) 1692
NspI RCATGY 1 cut(s) 1077
NspV TTCGAA 1 cut(s) 2083
PaeI GCATGC 1 cut(s) 1077
PaeR7I CTCGAG 2 cut(s) 1484, 2723
PagI TCATGA 1 cut(s) 1551
PceI AGGCCT 1 cut(s) 741
PciSI GCTCTTC 1 cut(s) 2878
PctI GAATGC 2 cut(s) 2103, 2274
PdiI GCCGGC 1 cut(s) 1000
PfeI GAWTC 9 cut(s) 149, 812, 927, 1046, 1080, 2077, 2566, 2620, 2978
PfoI TCCNGGA 1 cut(s) 1085
PkrI GCNGC 6 cut(s) 101, 291, 398, 1491, 1873, 2784
PleI GAGTC 5 cut(s) 42, 708, 2207, 2734, 2889
PluTI GGCGCC 1 cut(s) 2851
PpsI GAGTC 5 cut(s) 42, 708, 2207, 2734, 2889
PpuMI RGGWCCY 1 cut(s) 1235
PshBI ATTAAT 1 cut(s) 1293
Psp124BI GAGCTC 3 cut(s) 942, 1485, 2873
Psp5II RGGWCCY 1 cut(s) 1235
Psp6I CCWGG 2 cut(s) 159, 2491
PspEI GGTNACC 2 cut(s) 1397, 1877
PspGI CCWGG 2 cut(s) 159, 2491
PspN4I GGNNCC 8 cut(s) 280, 479, 1237, 2029, 2639, 2689, 2833, 2849
PspPI GGNCC 6 cut(s) 1160, 1235, 1376, 1714, 2688, 2734
PspPPI RGGWCCY 1 cut(s) 1235
PspXI VCTCGAGB 2 cut(s) 1484, 2723
PstNI CAGNNNCTG 3 cut(s) 526, 709, 2987
PsuI RGATCY 2 cut(s) 451, 1985
RsaI GTAC 2 cut(s) 636, 3054
RsaNI GTAC 2 cut(s) 635, 3053
SacI GAGCTC 3 cut(s) 942, 1485, 2873
SapI GCTCTTC 1 cut(s) 2878
SatI GCNGC 6 cut(s) 100, 290, 397, 1490, 1872, 2783
Sau96I GGNCC 6 cut(s) 1160, 1235, 1376, 1714, 2688, 2734
SchI GAGTC 5 cut(s) 43, 709, 2207, 2735, 2889
ScrFI CCNGG 3 cut(s) 161, 1087, 2493
SduI GDGCHC 7 cut(s) 197, 281, 942, 1485, 1593, 2500, 2873
SfaNI GCATC 3 cut(s) 1080, 1699, 2196
SfoI GGCGCC 1 cut(s) 2849
Sfr274I CTCGAG 2 cut(s) 1484, 2723
SfuI TTCGAA 1 cut(s) 2083
SinI GGWCC 6 cut(s) 1160, 1235, 1376, 1714, 2688, 2734
SlaI CTCGAG 2 cut(s) 1484, 2723
SmiI ATTTAAAT 1 cut(s) 1299
SmlI CTYRAG 5 cut(s) 1484, 1702, 2137, 2723, 3095
SmoI CTYRAG 5 cut(s) 1484, 1702, 2137, 2723, 3095
SpeI ACTAGT 2 cut(s) 758, 1411
SphI GCATGC 1 cut(s) 1077
SseBI AGGCCT 1 cut(s) 741
SsiI CCGC 6 cut(s) 113, 282, 1874, 2036, 2111, 2840
SspDI GGCGCC 1 cut(s) 2847
SspI AATATT 1 cut(s) 2665
SspMI CTAG 9 cut(s) 42, 387, 719, 743, 759, 885, 1394, 1412, 1643
SstI GAGCTC 3 cut(s) 942, 1485, 2873
StuI AGGCCT 1 cut(s) 741
StyD4I CCNGG 3 cut(s) 159, 1085, 2491
StyI CCWWGG 2 cut(s) 1844, 2578
SwaI ATTTAAAT 1 cut(s) 1299
TaaI ACNGT 5 cut(s) 89, 129, 711, 1439, 2318
TaiI ACGT 3 cut(s) 11, 1527, 2154
TfiI GAWTC 9 cut(s) 149, 812, 927, 1046, 1080, 2077, 2566, 2620, 2978
TscAI CASTG 7 cut(s) 787, 925, 984, 1182, 1600, 2196, 2689
TseFI GTSAC 6 cut(s) 205, 1206, 1414, 1937, 2187, 2739
TseI GCWGC 6 cut(s) 99, 289, 396, 1489, 1871, 2782
Tsp45I GTSAC 6 cut(s) 205, 1206, 1414, 1937, 2187, 2739
TspDTI ATGAA 9 cut(s) 503, 1017, 1038, 1568, 1622, 2312, 2336, 2846, 2865
TspGWI ACGGA 1 cut(s) 805
TspRI CASTG 7 cut(s) 787, 925, 984, 1182, 1600, 2196, 2689
VneI GTGCAC 1 cut(s) 2496
VpaK11BI GGWCC 6 cut(s) 1160, 1235, 1376, 1714, 2688, 2734
VspI ATTAAT 1 cut(s) 1293
XceI RCATGY 1 cut(s) 1077
XcmI CCANNNNNNNNNTGG 3 cut(s) 941, 1386, 1755
XhoI CTCGAG 2 cut(s) 1484, 2723
XmiI GTMKAC 1 cut(s) 1923
XspI CTAG 9 cut(s) 42, 387, 719, 743, 759, 885, 1394, 1412, 1643
Zsp2I ATGCAT 1 cut(s) 1692
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.