Rmu_sc0002538.1_g000004

Receptor-like protein 12

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002538.1
Physical Location & Seq
Reverse (-)
7670 .. 11010
3341 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002538.1_g000004.1.cds

Sequence Viewer

Length: 2094 bp
atggggtcatccttgtgtgtgctttcaatactagtactagttgtgttatcgtttcattttgtggttgcaaactcatcgcgctctttgcagcagccatcttgccatgatgaggagagctctgccatgctccagttcaagcaaagccttatcattgactcatctgcttcaaatgttagcaatggtgcttattcgaaggtttcaacatggaaaccacctctgcaaggagaaaacaagacatgctgctcatgggccggggttgagtgtgatgagaagacaggtcatgtaattgggcttgatctcagtagtagtttgctctatggctctatcaactccagcagcaccctcttccgccttgttcatcttgagaggctcaaccttgctgacaataatttcaattcctcacaaattcctcctaccattaggaactttccaaggctcaggtatctcaatctctctatgtcgggcttttctggtcatgcctcatctgaagtttcacaattgtctaagttgacatctcttgatttatcccaaaattttatgttttcagatgaaagattcttgagaagtctagctcaaaacttaactggcctagaaatacttgatctttcttacatgaatatatcatctacagtccccgacaccttggccaatttgtcacatttgacatccctctcccttcgaacttgcggcctgttcggcaaattaccattttctcttggtaatattagacatctcgtctatttggaccttggagataataaatttactggctttgtgcaatctccagctgttcttccatgggctaacctagaaatgttagacctttcattcaacatgctttgtgaattattattgttaccttcagctgcatccatcagatactataacattgcaaacaacaaattaacgggacaagtttcaccaatgatttgcaatctgacttctcttgaataccttgatatgtcaaacaacatgttgattggtgacctgccacagtgtggggaaaactttggagctgaactggaatacctcaaacttggaaataactcattccatggaatctttcctcaatcatacaccaatggaagcaatttgaggatgatggatattagtcacaacaattttcatgggcaactatcgaggtcactagcgaattgtgcaagtcttgaaattttagtcgtttcacacaataaatttaatgatacattccccgtttggttaggggctgtccctgagttgaaaattttgacaatggaccacaatatgttctatggagtgattctgcctaataagaagaatctcactttcgtgatgctgcgtattctcgatttgtcttacaataatttctcaggtgagtttccatttgaatacattttctctggaaatgggacaaatatcactgatgttttggagtattaccacaataatgatttggcatataacgaatatgtattgttctattactcgatcacaataatgagtaaaggtgtggagagacattacccaaaaattcaagaggatttgatactcattgacatctcaagtaacaattttgaagggaagattcctgaattcattgggacactaaaggggatttggtcgctcaatttctccaataacagtctcaccggtagcatcccctcatccttgggcaacttatcaaggcttgaatcgttggatctttcacgtaacaagttctctggtgagattcctcagcaactggcacaacttgattttctcacaaagttcaatgtctcttacaacaatctcacaggccctgtaccaaggggaatccacttcactacatttgacaacacttcatatcaaggaaatcaaggattgtgcggagacgtactgccaaagaaatgtgaaaattctgagggcactcaacttccaccttcaacatcagaagataatgactcggatgctggaattgaattggattgtaaatttgttgtggcagggttagcgagtggcttgttggtgggagtggttcttgcagactttgtgattaccaagtggaatgtgcggttcattgaaattgttgcggtattggttagactatcaaaaaggatgagaagacccagaaattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

697

Amino Acids

77.48

Weight (kDa)

5.57

Isoelectric Point (pI)

44.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 996
AccB7I CCANNNNNTGG 1 cut(s) 998
AccII CGCG 1 cut(s) 79
AciI CCGC 5 cut(s) 349, 687, 1845, 2029, 2048
AclWI GGATC 1 cut(s) 1686
AcoI YGGCCR 1 cut(s) 645
AcuI CTGAAG 2 cut(s) 507, 846
AdeI CACNNNGTG 1 cut(s) 998
AfaI GTAC 3 cut(s) 36, 1782, 1854
AfiI CCNNNNNNNGG 3 cut(s) 109, 221, 998
AflIII ACRYGT 1 cut(s) 972
AgeI ACCGGT 1 cut(s) 1628
AhdI GACNNNNNGTC 1 cut(s) 734
AhlI ACTAGT 2 cut(s) 31, 37
AleI CACNNNNGTG 1 cut(s) 1307
AluBI AGCT 5 cut(s) 117, 572, 788, 866, 1016
AluI AGCT 5 cut(s) 117, 572, 788, 866, 1016
Alw21I GWGCWC 1 cut(s) 119
Alw26I GTCTC 4 cut(s) 1489, 1628, 1759, 1842
AlwI GGATC 1 cut(s) 1686
AlwNI CAGNNNCTG 2 cut(s) 1720, 1778
AoxI GGCC 5 cut(s) 249, 586, 645, 688, 1774
ApeKI GCWGC 6 cut(s) 88, 91, 240, 336, 866, 1315
AsiGI ACCGGT 1 cut(s) 1628
AspLEI GCGC 1 cut(s) 81
AspS9I GGNCC 4 cut(s) 249, 745, 1255, 1775
AsuC2I CCSGG 1 cut(s) 253
AsuHPI GGTGA 5 cut(s) 912, 995, 1364, 1618, 1715
AsuII TTCGAA 2 cut(s) 191, 679
AvaII GGWCC 2 cut(s) 745, 1255
BaeGI GKGCMC 1 cut(s) 1886
BalI TGGCCA 1 cut(s) 647
BanII GRGCYC 1 cut(s) 119
BbsI GAAGAC 2 cut(s) 278, 2086
Bbv12I GWGCWC 1 cut(s) 119
BbvCI CCTCAGC 1 cut(s) 1713
BbvI GCAGC 6 cut(s) 100, 103, 227, 348, 853, 1302
BccI CCATC 3 cut(s) 103, 881, 1096
BcgI CGANNNNNNTGC 2 cut(s) 57, 91
BcnI CCSGG 1 cut(s) 253
BcoDI GTCTC 4 cut(s) 1489, 1628, 1759, 1842
BcuI ACTAGT 2 cut(s) 31, 37
BfaI CTAG 6 cut(s) 32, 38, 569, 590, 809, 1148
BfmI CTRYAG 1 cut(s) 627
BfuAI ACCTGC 1 cut(s) 996
BglI GCCNNNNNGGC 1 cut(s) 696
BisI GCNGC 7 cut(s) 89, 92, 241, 337, 688, 867, 1316
BlsI GCNGC 7 cut(s) 90, 93, 242, 338, 689, 868, 1317
BmcAI AGTACT 1 cut(s) 36
Bme1390I CCNGG 1 cut(s) 253
Bme18I GGWCC 2 cut(s) 745, 1255
BmeRI GACNNNNNGTC 1 cut(s) 734
BmgT120I GGNCC 4 cut(s) 249, 745, 1255, 1775
BmrFI CCNGG 1 cut(s) 253
BmsI GCATC 4 cut(s) 878, 1302, 1644, 1915
BpiI GAAGAC 2 cut(s) 278, 2086
BplI GAGNNNNNCTC 2 cut(s) 101, 133
BpmI CTGGAG 3 cut(s) 113, 316, 768
Bpu10I CCTNAGC 2 cut(s) 437, 1713
Bpu14I TTCGAA 2 cut(s) 191, 679
BpuEI CTTGAG 3 cut(s) 383, 580, 1525
BpuMI CCSGG 1 cut(s) 253
BsaAI YACGTR 1 cut(s) 1688
BsaJI CCNNGG 8 cut(s) 252, 431, 642, 748, 797, 1054, 1647, 1784
BsaWI WCCGGW 1 cut(s) 1628
Bsc4I CCNNNNNNNGG 3 cut(s) 109, 221, 998
Bse118I RCCGGY 1 cut(s) 1628
Bse1I ACTGG 5 cut(s) 130, 589, 772, 1026, 1725
Bse3DI GCAATG 2 cut(s) 184, 888
BseDI CCNNGG 8 cut(s) 252, 431, 642, 748, 797, 1054, 1647, 1784
BseGI GGATG 8 cut(s) 8, 665, 869, 1104, 1635, 1643, 1930, 2079
BseLI CCNNNNNNNGG 3 cut(s) 109, 221, 998
BseMI GCAATG 2 cut(s) 184, 888
BseMII CTCAG 6 cut(s) 313, 451, 1224, 1362, 1727, 1869
BseNI ACTGG 5 cut(s) 130, 589, 772, 1026, 1725
BseRI GAGGAG 1 cut(s) 125
BseSI GKGCMC 1 cut(s) 1886
BseXI GCAGC 6 cut(s) 100, 103, 227, 348, 853, 1302
Bsh1236I CGCG 1 cut(s) 79
BshFI GGCC 5 cut(s) 251, 588, 647, 690, 1776
BshTI ACCGGT 1 cut(s) 1628
BsiHKAI GWGCWC 1 cut(s) 119
BsiSI CCGG 2 cut(s) 252, 1629
BslFI GGGAC 5 cut(s) 617, 924, 1214, 1402, 1594
BslI CCNNNNNNNGG 3 cut(s) 109, 221, 998
BsmAI GTCTC 4 cut(s) 1489, 1628, 1759, 1842
BsmBI CGTCTC 1 cut(s) 1842
BsmFI GGGAC 5 cut(s) 617, 924, 1214, 1402, 1594
BsnI GGCC 5 cut(s) 251, 588, 647, 690, 1776
Bsp119I TTCGAA 2 cut(s) 191, 679
Bsp1286I GDGCHC 2 cut(s) 119, 1886
Bsp143I GATC 4 cut(s) 295, 601, 1467, 1678
Bsp19I CCATGG 2 cut(s) 797, 1054
BspACI CCGC 5 cut(s) 349, 687, 1845, 2029, 2048
BspANI GGCC 5 cut(s) 251, 588, 647, 690, 1776
BspCNI CTCAG 6 cut(s) 312, 450, 1225, 1361, 1726, 1870
BspFNI CGCG 1 cut(s) 79
BspMI ACCTGC 1 cut(s) 996
BspPI GGATC 1 cut(s) 1686
BspT104I TTCGAA 2 cut(s) 191, 679
BsrDI GCAATG 2 cut(s) 184, 888
BsrFI RCCGGY 1 cut(s) 1628
BsrI ACTGG 5 cut(s) 130, 589, 772, 1026, 1725
BssAI RCCGGY 1 cut(s) 1628
BssECI CCNNGG 8 cut(s) 252, 431, 642, 748, 797, 1054, 1647, 1784
BssMI GATC 4 cut(s) 295, 601, 1467, 1678
BssT1I CCWWGG 7 cut(s) 431, 642, 748, 797, 1054, 1647, 1784
Bst4CI ACNGT 3 cut(s) 631, 996, 1622
Bst6I CTCTTC 1 cut(s) 350
BstBAI YACGTR 1 cut(s) 1688
BstBI TTCGAA 2 cut(s) 191, 679
BstDEI CTNAG 7 cut(s) 299, 437, 504, 1233, 1348, 1713, 1878
BstDSI CCRYGG 2 cut(s) 797, 1054
BstEII GGTNACC 1 cut(s) 983
BstENI CCTNNNNNAGG 1 cut(s) 219
BstF5I GGATG 8 cut(s) 8, 665, 869, 1104, 1635, 1643, 1930, 2079
BstFNI CGCG 1 cut(s) 79
BstHHI GCGC 1 cut(s) 81
BstKTI GATC 4 cut(s) 298, 604, 1470, 1681
BstMAI GTCTC 4 cut(s) 1489, 1628, 1759, 1842
BstMBI GATC 4 cut(s) 295, 601, 1467, 1678
BstMWI GCNNNNNNNGC 4 cut(s) 85, 696, 1157, 1967
BstNSI RCATGY 3 cut(s) 240, 838, 976
BstPI GGTNACC 1 cut(s) 983
BstSCI CCNGG 1 cut(s) 251
BstSFI CTRYAG 1 cut(s) 627
BstSLI GKGCMC 1 cut(s) 1886
BstUI CGCG 1 cut(s) 79
BstV1I GCAGC 6 cut(s) 100, 103, 227, 348, 853, 1302
BstV2I GAAGAC 2 cut(s) 278, 2086
BstX2I RGATCY 1 cut(s) 1678
BstYI RGATCY 1 cut(s) 1678
BsuRI GGCC 5 cut(s) 251, 588, 647, 690, 1776
BtgI CCRYGG 2 cut(s) 797, 1054
BtgZI GCGATG 1 cut(s) 60
BtsCI GGATG 8 cut(s) 8, 665, 869, 1104, 1635, 1643, 1930, 2079
BtsIMutI CAGTG 2 cut(s) 1001, 1398
BveI ACCTGC 1 cut(s) 996
CaiI CAGNNNCTG 2 cut(s) 1720, 1778
CfoI GCGC 1 cut(s) 81
Cfr10I RCCGGY 1 cut(s) 1628
Cfr13I GGNCC 4 cut(s) 249, 745, 1255, 1775
Csp6I GTAC 3 cut(s) 35, 1781, 1853
CspAI ACCGGT 1 cut(s) 1628
CviQI GTAC 3 cut(s) 35, 1781, 1853
DdeI CTNAG 7 cut(s) 299, 437, 504, 1233, 1348, 1713, 1878
DpnI GATC 4 cut(s) 297, 603, 1469, 1680
DpnII GATC 4 cut(s) 295, 601, 1467, 1678
DraIII CACNNNGTG 1 cut(s) 998
DriI GACNNNNNGTC 1 cut(s) 734
EaeI YGGCCR 1 cut(s) 645
Eam1104I CTCTTC 1 cut(s) 350
Eam1105I GACNNNNNGTC 1 cut(s) 734
EarI CTCTTC 1 cut(s) 350
EciI GGCGGA 1 cut(s) 338
Ecl136II GAGCTC 1 cut(s) 117
Eco130I CCWWGG 7 cut(s) 431, 642, 748, 797, 1054, 1647, 1784
Eco24I GRGCYC 1 cut(s) 119
Eco47I GGWCC 2 cut(s) 745, 1255
Eco53kI GAGCTC 1 cut(s) 117
Eco57I CTGAAG 2 cut(s) 507, 846
Eco91I GGTNACC 1 cut(s) 983
EcoICRI GAGCTC 1 cut(s) 117
EcoNI CCTNNNNNAGG 1 cut(s) 219
EcoO109I RGGNCCY 1 cut(s) 1775
EcoO65I GGTNACC 1 cut(s) 983
EcoRI GAATTC 1 cut(s) 1571
EcoT14I CCWWGG 7 cut(s) 431, 642, 748, 797, 1054, 1647, 1784
EcoT38I GRGCYC 1 cut(s) 119
ErhI CCWWGG 7 cut(s) 431, 642, 748, 797, 1054, 1647, 1784
Esp3I CGTCTC 1 cut(s) 1842
FaqI GGGAC 5 cut(s) 617, 924, 1214, 1402, 1594
Fnu4HI GCNGC 7 cut(s) 89, 92, 241, 337, 688, 867, 1316
FokI GGATG 7 cut(s) 652, 856, 1111, 1622, 1630, 1937, 2086
FriOI GRGCYC 1 cut(s) 119
Fsp4HI GCNGC 7 cut(s) 89, 92, 241, 337, 688, 867, 1316
FspBI CTAG 6 cut(s) 32, 38, 569, 590, 809, 1148
GlaI GCGC 1 cut(s) 80
GluI GCNGC 7 cut(s) 89, 92, 241, 337, 688, 867, 1316
GsuI CTGGAG 3 cut(s) 113, 316, 768
HaeIII GGCC 5 cut(s) 251, 588, 647, 690, 1776
HapII CCGG 2 cut(s) 252, 1629
HhaI GCGC 1 cut(s) 81
Hin6I GCGC 1 cut(s) 79
HinP1I GCGC 1 cut(s) 79
HincII GTYRAC 1 cut(s) 510
HindII GTYRAC 1 cut(s) 510
HpaII CCGG 2 cut(s) 252, 1629
HphI GGTGA 5 cut(s) 912, 995, 1364, 1618, 1715
Hpy166II GTNNAC 1 cut(s) 510
Hpy188I TCNGA 7 cut(s) 487, 547, 878, 939, 1879, 1909, 1924
Hpy8I GTNNAC 1 cut(s) 510
HpyAV CCTTC 5 cut(s) 187, 686, 870, 1550, 1908
HpyCH4III ACNGT 3 cut(s) 631, 996, 1622
HpyCH4IV ACGT 2 cut(s) 1687, 1851
HpyCH4V TGCA 9 cut(s) 68, 88, 220, 778, 869, 893, 933, 1160, 2000
HpyF10VI GCNNNNNNNGC 4 cut(s) 85, 696, 1157, 1967
HpyF3I CTNAG 7 cut(s) 299, 437, 504, 1233, 1348, 1713, 1878
HpySE526I ACGT 2 cut(s) 1687, 1851
HspAI GCGC 1 cut(s) 79
Kzo9I GATC 4 cut(s) 295, 601, 1467, 1678
LmnI GCTCC 2 cut(s) 132, 1013
Lsp1109I GCAGC 6 cut(s) 100, 103, 227, 348, 853, 1302
LweI GCATC 4 cut(s) 878, 1302, 1644, 1915
MaeI CTAG 6 cut(s) 32, 38, 569, 590, 809, 1148
MaeII ACGT 2 cut(s) 1687, 1851
MaeIII GTNAC 7 cut(s) 654, 855, 983, 1112, 1143, 1544, 1688
MalI GATC 4 cut(s) 297, 603, 1469, 1680
MboI GATC 4 cut(s) 295, 601, 1467, 1678
MboII GAAGA 7 cut(s) 283, 337, 785, 1306, 1573, 1922, 2091
MfeI CAATTG 1 cut(s) 497
MflI RGATCY 1 cut(s) 1678
MhlI GDGCHC 2 cut(s) 119, 1886
MlsI TGGCCA 1 cut(s) 647
MluNI TGGCCA 1 cut(s) 647
MlyI GAGTC 2 cut(s) 149, 1913
MmeI TCCRAC 1 cut(s) 1656
Mox20I TGGCCA 1 cut(s) 647
MscI TGGCCA 1 cut(s) 647
MseI TTAA 3 cut(s) 581, 905, 1197
MslI CAYNNNNRTG 4 cut(s) 13, 1307, 1425, 1475
Msp20I TGGCCA 1 cut(s) 647
MspA1I CMGCKG 2 cut(s) 788, 866
MspI CCGG 2 cut(s) 252, 1629
MspR9I CCNGG 1 cut(s) 253
MunI CAATTG 1 cut(s) 497
MvnI CGCG 1 cut(s) 79
MwoI GCNNNNNNNGC 4 cut(s) 85, 696, 1157, 1967
NciI CCSGG 1 cut(s) 253
NcoI CCATGG 2 cut(s) 797, 1054
NdeII GATC 4 cut(s) 295, 601, 1467, 1678
NmuCI GTSAC 4 cut(s) 654, 983, 1112, 1143
NspI RCATGY 3 cut(s) 240, 838, 976
NspV TTCGAA 2 cut(s) 191, 679
OliI CACNNNNGTG 1 cut(s) 1307
PciI ACATGT 1 cut(s) 972
PfeI GAWTC 8 cut(s) 555, 1059, 1279, 1297, 1564, 1670, 1708, 1791
PflMI CCANNNNNTGG 1 cut(s) 998
PinAI ACCGGT 1 cut(s) 1628
PkrI GCNGC 7 cut(s) 90, 93, 242, 338, 689, 868, 1317
PleI GAGTC 2 cut(s) 149, 1913
PpsI GAGTC 2 cut(s) 149, 1913
Ppu21I YACGTR 1 cut(s) 1688
PscI ACATGT 1 cut(s) 972
Psp124BI GAGCTC 1 cut(s) 119
PspEI GGTNACC 1 cut(s) 983
PspPI GGNCC 4 cut(s) 249, 745, 1255, 1775
PstNI CAGNNNCTG 2 cut(s) 1720, 1778
PsuI RGATCY 1 cut(s) 1678
PvuII CAGCTG 2 cut(s) 788, 866
RsaI GTAC 3 cut(s) 36, 1782, 1854
RsaNI GTAC 3 cut(s) 35, 1781, 1853
RseI CAYNNNNRTG 4 cut(s) 13, 1307, 1425, 1475
SacI GAGCTC 1 cut(s) 119
SaqAI TTAA 3 cut(s) 581, 905, 1197
SatI GCNGC 7 cut(s) 89, 92, 241, 337, 688, 867, 1316
Sau3AI GATC 4 cut(s) 295, 601, 1467, 1678
Sau96I GGNCC 4 cut(s) 249, 745, 1255, 1775
ScaI AGTACT 1 cut(s) 36
SchI GAGTC 2 cut(s) 149, 1913
ScrFI CCNGG 1 cut(s) 253
SduI GDGCHC 2 cut(s) 119, 1886
SfaNI GCATC 4 cut(s) 878, 1302, 1644, 1915
SfcI CTRYAG 1 cut(s) 627
SfuI TTCGAA 2 cut(s) 191, 679
SinI GGWCC 2 cut(s) 745, 1255
SmiMI CAYNNNNRTG 4 cut(s) 13, 1307, 1425, 1475
SmlI CTYRAG 3 cut(s) 362, 559, 1540
SmoI CTYRAG 3 cut(s) 362, 559, 1540
SpeI ACTAGT 2 cut(s) 31, 37
SsiI CCGC 5 cut(s) 349, 687, 1845, 2029, 2048
SspI AATATT 1 cut(s) 724
SspMI CTAG 6 cut(s) 32, 38, 569, 590, 809, 1148
SstI GAGCTC 1 cut(s) 119
StyD4I CCNGG 1 cut(s) 251
StyI CCWWGG 7 cut(s) 431, 642, 748, 797, 1054, 1647, 1784
TaaI ACNGT 3 cut(s) 631, 996, 1622
TaiI ACGT 2 cut(s) 1690, 1854
TaqI TCGA 5 cut(s) 191, 679, 1139, 1326, 1466
TatI WGTACW 1 cut(s) 34
TauI GCSGC 1 cut(s) 690
TfiI GAWTC 8 cut(s) 555, 1059, 1279, 1297, 1564, 1670, 1708, 1791
Tru1I TTAA 3 cut(s) 581, 905, 1197
Tru9I TTAA 3 cut(s) 581, 905, 1197
TscAI CASTG 2 cut(s) 1001, 1405
TseFI GTSAC 4 cut(s) 654, 983, 1112, 1143
TseI GCWGC 6 cut(s) 88, 91, 240, 336, 866, 1315
Tsp45I GTSAC 4 cut(s) 654, 983, 1112, 1143
TspDTI ATGAA 9 cut(s) 44, 347, 564, 629, 816, 1115, 1564, 1809, 2023
TspRI CASTG 2 cut(s) 1001, 1405
Van91I CCANNNNNTGG 1 cut(s) 998
VpaK11BI GGWCC 2 cut(s) 745, 1255
XagI CCTNNNNNAGG 1 cut(s) 219
XceI RCATGY 3 cut(s) 240, 838, 976
XspI CTAG 6 cut(s) 32, 38, 569, 590, 809, 1148
ZrmI AGTACT 1 cut(s) 36
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.