Rroxscaffold_4G00307720

Receptor-like protein 12

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
29180164 .. 29182659
2496 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00307720.1

Sequence Viewer

Length: 2496 bp
ATGGGGTTATCTATGTGTATGCTTTTAAAAGTAGCTGTGATAATGTTTCAACTGGTGGTTGCTAACTCTTTATACTCTTCGCAGCGGCAGCGGCCATCTTGTGATGATGAAGATAGCTCTGCCTTACTGCTATTCAAGCAAAGCTTTGTCATTGACCGATCTGCTAAGTCATGTAATTATGATGGTGCTTACCCGAAGGTCTCAACATGGAAATCAGCTCATGAAGGAGAAAACAACAAATGCTGCTCATGGGATGGCGTAGAGTGTGATGAGAAGACAGGTCATGTGATTGAGCTGGATCTTAGTAAAAGTTGTCTCCATGGCTCTATCAACTCCACTAGTAGCCTCTTTCACCTTGTTCATCTTCAGAGACTCAGCCTCGCTCAGAATAACTTCAGTTACTCTACAATTCCTACTACTATTAGGAATCTTCAGAGGCTCAGGTATCTCGATCTTTATGACTCTGTATTTTCTGGTCATATCCCATCTGAAGTATCACAGCTGTCCAATTTGTCATTCCTTGACCTTTCGTTGAACAACCTCAACGGACCAATCTCTGCTTCCTTGTCAAACCTTACTCAACTGAAGACACTTTGGCTCGCTGGGAATCAATTAACTGGTTCAGTCCCATCTTTTCTTAGCAACCTTAGTAGGCTAACCGAAATAGAACTTAGTTCGAATAAATTGCATGGTTCAATCCCATCTTTTCTTGGTAACCTTAGCAGACTAACTTTGATAGGTCTTAGCTGGAATGCATTGCATGGTTCAGTTCCCGAGTCATTTTCCAAACTCACGAATCTCCAAAAACTTTTTCTACAATCTAATGTACTCAGCGGTACTGTGGATTTTCATATGTTTCTTAAGCTAGAAAATCTAATAGCAATTCGTCTAGGTGAAAACAACTTAGATTTGCTCTTTGATTCCAGAGCTATAAATGAAACCGCTCCACAGTTCAGAATTCTCGGACTGAATTCATGCAACATACGAGAGTTTCCAGTTTTTCTAAGATATCAACAAAATTTGGTGTGGTTGAGACTTTCTGAAAATGAAATGCATGGAAAAGTACCAATTTGGATGGGGAACACAAGCACAAACACTCTTGAGATCATGGACATTTCTCAAAACTCCCTCTCAGGCTTTGACCAGCATTCAGTCGTCCTTCCTTGGGTTAACCTACAATTGTTAGATCTTTCATCCAACATGCTACATGGGCCACTACCGATACCTCGAAAAAACATCATATATTATGGCATTTCAGATAACAAATTAACTGGAGAAATTTCACCATTAATTTGCAATCTGACTTCTCTTTTGTTCCTTGATTTGTCGCATAACAAGTTGAGTGGCATGCTTCCCCAGTGTCTTGGACACTTTAATGTTGATCTACAAGTTTTAAATCTTCGTGACAACTCATTTCATGGATTTCTTCCTCATACATACACCAGAAAAAGCAACATGGTGGCGATTGATGTTAGTCATAACCAATTGCAGGGGAAAATACCAAGGACATTGGTGAATTGTGTGATGCTTGAGTTTCTTGTTCTGTCAAACAACAATTTCAGTGATGTTTTTCCCTTTTGGTTAGGCACCCTCCCAAATTTAAAAGTTTTGGTACTGCGTAGTAATAGGTTCCATAGTGTTGTCATAGGGAATCCAGGGAAGAAGGTGGATTTCCCGAAGTTGCATATTCTTGATTTGTCACACAATAATTTCGCAGGTGAGTTTCCTTCCGAATTCATCTTCTCTGCGAATGCCATACCTGTAACTCTAAGCAAGTTGACATATATGATCACAAGATTCACAACCTTATCTGAGAGCGAGAGCATTTATTTCAGTGCTCCGCTGTATTACGAGTACTCGATCACGCTAATGAATAAAGGTGTGGAGAGATACTTTCAAAAGATTCATGAACAGTATGCAGTCATTGATATCTCAAGCAACAAATTTGAGGGAAACATTCCTGAATTCATTGGGAAACTACAGGGACTTCGGTCGCTCAATATTTCCAATAATATCTTCAAGGGCTGCATCCCGTCATCTTTAGGAAACTTAACAGTGCTTGAGTCGTTGGATCTTTCACACAACAAGCTCTCAGGAGTGATCCCTCAACAACTGACGCAACTTACATTCCTCGAGCAGTTCAATGTATCTCACAATAACCTCAAAGGTCCTATACCACATGGAACCCAACTCACAACATTTGACATCACTTCATTTGATGGAAACCCTGGATTATGTGGAGATCCATTGCCAAACAAATGTGGAAGTTCCAGAGTTCCTCCACCACCACCTTCAAGCATACGCGAAGATGATTCAGGCTCTGCAATTGAATTTGATTGGAAGTTTGTTTGGGCAGGAGTTGTGAGCGGGTTCGTGGTGGGAGTGGTTCTTGCGGACCTCGCGATCACTAGGAGGCATGAGTGGTTTACCATGACAGTGGAAATATTGATCAGGGAAATAAAAAAGATAAGGGTCATTGTGGGGAGCATAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

831

Amino Acids

92.89

Weight (kDa)

6.68

Isoelectric Point (pI)

42.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 108 - 275 1.3e-12 Leucine-rich repeat region
LRR_8 PF13855 217 - 277 4.8e-07 Leucine rich repeat
LRR_8 PF13855 462 - 520 1.5e-06 Leucine rich repeat
LRR_8 PF13855 511 - 571 1.9e-07 Leucine rich repeat
LRR_8 PF13855 641 - 697 2.9e-06 Leucine rich repeat
LRR_8 PF13855 662 - 721 1.9e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1706
Acc36I ACCTGC 1 cut(s) 1706
AccB1I GGYRCC 1 cut(s) 1586
AccBSI CCGCTC 2 cut(s) 944, 2367
AccII CGCG 2 cut(s) 2304, 2402
AciI CCGC 7 cut(s) 85, 91, 834, 942, 1841, 2367, 2393
AclWI GGATC 4 cut(s) 306, 2079, 2095, 2237
AcoI YGGCCR 1 cut(s) 92
AcsI RAATTY 9 cut(s) 957, 970, 1018, 1278, 1597, 1733, 1943, 1964, 2330
AcuI CTGAAG 5 cut(s) 350, 379, 416, 510, 605
AfaI GTAC 5 cut(s) 828, 838, 1065, 1614, 1856
AfiI CCNNNNNNNGG 2 cut(s) 1165, 1489
AflII CTTAAG 1 cut(s) 860
AgsI TTSAA 9 cut(s) 50, 136, 535, 696, 1898, 2020, 2143, 2295, 2330
AhlI ACTAGT 1 cut(s) 338
AjnI CCWGG 2 cut(s) 1654, 2227
AjuI GAANNNNNNNTTGG 8 cut(s) 500, 532, 544, 576, 795, 827, 2000, 2032
Alw21I GWGCWC 1 cut(s) 1840
Alw26I GTCTC 4 cut(s) 205, 320, 364, 1027
AlwI GGATC 4 cut(s) 306, 2079, 2095, 2237
AlwNI CAGNNNCTG 1 cut(s) 2321
Ama87I CYCGRG 2 cut(s) 773, 2132
AoxI GGCC 2 cut(s) 92, 1211
ApeKI GCWGC 4 cut(s) 82, 88, 243, 2025
ApoI RAATTY 9 cut(s) 957, 970, 1018, 1278, 1597, 1733, 1943, 1964, 2330
ArsI GACNNNNNNTTYG 2 cut(s) 1294, 1326
AseI ATTAAT 1 cut(s) 1289
Asp700I GAANNNNTTC 1 cut(s) 392
AspS9I GGNCC 4 cut(s) 548, 1211, 2168, 2395
AsuHPI GGTGA 5 cut(s) 344, 905, 1275, 1525, 1730
AsuII TTCGAA 1 cut(s) 677
AvaI CYCGRG 2 cut(s) 773, 2132
AvaII GGWCC 3 cut(s) 548, 2168, 2395
BanI GGYRCC 1 cut(s) 1586
BbsI GAAGAC 2 cut(s) 281, 593
Bbv12I GWGCWC 1 cut(s) 1840
BbvI GCAGC 4 cut(s) 94, 100, 230, 2012
BccI CCATC 8 cut(s) 103, 176, 248, 493, 637, 709, 1069, 2213
BcgI CGANNNNNNTGC 2 cut(s) 667, 701
BciT130I CCWGG 2 cut(s) 1656, 2229
BclI TGATCA 2 cut(s) 1788, 2448
BcoDI GTCTC 4 cut(s) 205, 320, 364, 1027
BcuI ACTAGT 1 cut(s) 338
BfaI CTAG 4 cut(s) 339, 866, 890, 2409
BfmI CTRYAG 1 cut(s) 1979
BfrI CTTAAG 1 cut(s) 860
BfuAI ACCTGC 1 cut(s) 1706
BglII AGATCT 1 cut(s) 1186
BisI GCNGC 6 cut(s) 83, 86, 89, 92, 244, 2026
BlsI GCNGC 6 cut(s) 84, 87, 90, 93, 245, 2027
BmcAI AGTACT 1 cut(s) 1856
Bme1390I CCNGG 2 cut(s) 1656, 2229
Bme18I GGWCC 3 cut(s) 548, 2168, 2395
BmeT110I CYCGRG 2 cut(s) 773, 2132
BmgT120I GGNCC 4 cut(s) 548, 1211, 2168, 2395
BmiI GGNNCC 3 cut(s) 1588, 1631, 2185
BmrFI CCNGG 2 cut(s) 1656, 2229
BmrI ACTGGG 1 cut(s) 1351
BmsI GCATC 2 cut(s) 1515, 2037
BmuI ACTGGG 1 cut(s) 1351
BoxI GACNNNNGTC 1 cut(s) 1990
BpiI GAAGAC 2 cut(s) 281, 593
BpmI CTGGAG 1 cut(s) 1293
Bpu10I CCTNAGC 2 cut(s) 440, 719
Bpu14I TTCGAA 1 cut(s) 677
BpuEI CTTGAG 4 cut(s) 1121, 1550, 1918, 2081
BsaI GGTCTC 1 cut(s) 205
BsaJI CCNNGG 5 cut(s) 319, 1163, 1502, 1655, 2227
Bsc4I CCNNNNNNNGG 2 cut(s) 1165, 1489
Bse1I ACTGG 5 cut(s) 57, 622, 995, 1276, 1357
Bse3DI GCAATG 2 cut(s) 755, 2246
BseBI CCWGG 2 cut(s) 1656, 2229
BseDI CCNNGG 5 cut(s) 319, 1163, 1502, 1655, 2227
BseGI GGATG 4 cut(s) 259, 1080, 1193, 2028
BseLI CCNNNNNNNGG 2 cut(s) 1165, 1489
BseMI GCAATG 2 cut(s) 755, 2246
BseMII CTCAG 7 cut(s) 388, 398, 454, 844, 1146, 1803, 2106
BseNI ACTGG 5 cut(s) 57, 622, 995, 1276, 1357
BseXI GCAGC 4 cut(s) 94, 100, 230, 2012
BseYI CCCAGC 1 cut(s) 602
Bsh1236I CGCG 2 cut(s) 2304, 2402
Bsh1285I CGRYCG 1 cut(s) 1994
BshFI GGCC 2 cut(s) 94, 1213
BshNI GGYRCC 1 cut(s) 1586
BsiEI CGRYCG 1 cut(s) 1994
BsiHKAI GWGCWC 1 cut(s) 1840
BsiHKCI CYCGRG 2 cut(s) 773, 2132
BslFI GGGAC 2 cut(s) 611, 1998
BslI CCNNNNNNNGG 2 cut(s) 1165, 1489
BsmAI GTCTC 4 cut(s) 205, 320, 364, 1027
BsmFI GGGAC 2 cut(s) 611, 1998
BsmI GAATGC 3 cut(s) 757, 1147, 1756
BsnI GGCC 2 cut(s) 94, 1213
Bso31I GGTCTC 1 cut(s) 205
BsoBI CYCGRG 2 cut(s) 773, 2132
Bsp119I TTCGAA 1 cut(s) 677
Bsp1286I GDGCHC 1 cut(s) 1840
Bsp19I CCATGG 1 cut(s) 319
Bsp68I TCGCGA 1 cut(s) 2402
BspACI CCGC 7 cut(s) 85, 91, 834, 942, 1841, 2367, 2393
BspANI GGCC 2 cut(s) 94, 1213
BspCNI CTCAG 7 cut(s) 387, 397, 453, 843, 1145, 1804, 2105
BspFNI CGCG 2 cut(s) 2304, 2402
BspHI TCATGA 2 cut(s) 220, 1906
BspLI GGNNCC 3 cut(s) 1588, 1631, 2185
BspMI ACCTGC 1 cut(s) 1706
BspPI GGATC 4 cut(s) 306, 2079, 2095, 2237
BspT104I TTCGAA 1 cut(s) 677
BspT107I GGYRCC 1 cut(s) 1586
BspTI CTTAAG 1 cut(s) 860
BspTNI GGTCTC 1 cut(s) 205
BsrBI CCGCTC 2 cut(s) 944, 2367
BsrDI GCAATG 2 cut(s) 755, 2246
BsrI ACTGG 5 cut(s) 57, 622, 995, 1276, 1357
BssECI CCNNGG 5 cut(s) 319, 1163, 1502, 1655, 2227
BssT1I CCWWGG 3 cut(s) 319, 1163, 1502
Bst2UI CCWGG 2 cut(s) 1656, 2229
Bst4CI ACNGT 5 cut(s) 841, 951, 1914, 2056, 2437
Bst6I CTCTTC 1 cut(s) 82
BstAFI CTTAAG 1 cut(s) 860
BstBI TTCGAA 1 cut(s) 677
BstC8I GCNNGC 2 cut(s) 600, 1349
BstDSI CCRYGG 1 cut(s) 319
BstEII GGTNACC 1 cut(s) 713
BstF5I GGATG 4 cut(s) 259, 1080, 1193, 2028
BstFNI CGCG 2 cut(s) 2304, 2402
BstMAI GTCTC 4 cut(s) 205, 320, 364, 1027
BstMCI CGRYCG 1 cut(s) 1994
BstMWI GCNNNNNNNGC 5 cut(s) 88, 91, 136, 1210, 2399
BstNI CCWGG 2 cut(s) 1656, 2229
BstNSI RCATGY 2 cut(s) 1204, 1351
BstPAI GACNNNNGTC 1 cut(s) 1990
BstPI GGTNACC 1 cut(s) 713
BstSCI CCNGG 2 cut(s) 1654, 2227
BstSFI CTRYAG 1 cut(s) 1979
BstUI CGCG 2 cut(s) 2304, 2402
BstV1I GCAGC 4 cut(s) 94, 100, 230, 2012
BstV2I GAAGAC 2 cut(s) 281, 593
BstX2I RGATCY 4 cut(s) 298, 1186, 2071, 2242
BstXI CCANNNNNNTGG 2 cut(s) 1364, 2437
BstYI RGATCY 4 cut(s) 298, 1186, 2071, 2242
BsuRI GGCC 2 cut(s) 94, 1213
BtgI CCRYGG 1 cut(s) 319
BtsCI GGATG 4 cut(s) 259, 1080, 1193, 2028
BtsIMutI CAGTG 5 cut(s) 1364, 1567, 1840, 2061, 2442
BtuMI TCGCGA 1 cut(s) 2402
BveI ACCTGC 1 cut(s) 1706
Cac8I GCNNGC 2 cut(s) 600, 1349
CaiI CAGNNNCTG 1 cut(s) 2321
CciI TCATGA 2 cut(s) 220, 1906
Cfr13I GGNCC 4 cut(s) 548, 1211, 2168, 2395
CseI GACGC 1 cut(s) 2125
Csp6I GTAC 5 cut(s) 827, 837, 1064, 1613, 1855
CspCI CAANNNNNGTGG 2 cut(s) 1324, 1359
CviQI GTAC 5 cut(s) 827, 837, 1064, 1613, 1855
DraI TTTAAA 3 cut(s) 27, 1395, 1602
EaeI YGGCCR 1 cut(s) 92
Eam1104I CTCTTC 1 cut(s) 82
EarI CTCTTC 1 cut(s) 82
Eco130I CCWWGG 3 cut(s) 319, 1163, 1502
Eco31I GGTCTC 1 cut(s) 205
Eco32I GATATC 2 cut(s) 1010, 1930
Eco47I GGWCC 3 cut(s) 548, 2168, 2395
Eco57I CTGAAG 5 cut(s) 350, 379, 416, 510, 605
Eco88I CYCGRG 2 cut(s) 773, 2132
Eco91I GGTNACC 1 cut(s) 713
EcoO109I RGGNCCY 1 cut(s) 2168
EcoO65I GGTNACC 1 cut(s) 713
EcoRI GAATTC 4 cut(s) 957, 970, 1733, 1964
EcoRII CCWGG 2 cut(s) 1654, 2227
EcoRV GATATC 2 cut(s) 1010, 1930
EcoT14I CCWWGG 3 cut(s) 319, 1163, 1502
EcoT22I ATGCAT 2 cut(s) 757, 1056
ErhI CCWWGG 3 cut(s) 319, 1163, 1502
FalI AAGNNNNNCTT 2 cut(s) 128, 160
FaqI GGGAC 2 cut(s) 611, 1998
FauI CCCGC 1 cut(s) 2360
FauNDI CATATG 1 cut(s) 852
FbaI TGATCA 2 cut(s) 1788, 2448
Fnu4HI GCNGC 6 cut(s) 83, 86, 89, 92, 244, 2026
FokI GGATG 4 cut(s) 266, 1087, 1180, 2015
Fsp4HI GCNGC 6 cut(s) 83, 86, 89, 92, 244, 2026
FspBI CTAG 4 cut(s) 339, 866, 890, 2409
GluI GCNGC 6 cut(s) 83, 86, 89, 92, 244, 2026
GsaI CCCAGC 1 cut(s) 606
GsuI CTGGAG 1 cut(s) 1293
HaeIII GGCC 2 cut(s) 94, 1213
HgaI GACGC 1 cut(s) 2125
HincII GTYRAC 2 cut(s) 1171, 1779
HindII GTYRAC 2 cut(s) 1171, 1779
HindIII AAGCTT 1 cut(s) 142
HpaI GTTAAC 1 cut(s) 1171
HphI GGTGA 5 cut(s) 344, 905, 1275, 1525, 1730
Hpy166II GTNNAC 3 cut(s) 1171, 1779, 2427
Hpy8I GTNNAC 3 cut(s) 1171, 1779, 2427
HpyAV CCTTC 6 cut(s) 190, 218, 1169, 1657, 1737, 2301
HpyCH4III ACNGT 5 cut(s) 841, 951, 1914, 2056, 2437
HpyF10VI GCNNNNNNNGC 5 cut(s) 88, 91, 136, 1210, 2399
Ksp22I TGATCA 2 cut(s) 1788, 2448
KspAI GTTAAC 1 cut(s) 1171
LmnI GCTCC 3 cut(s) 949, 1843, 2484
Lsp1109I GCAGC 4 cut(s) 94, 100, 230, 2012
LweI GCATC 2 cut(s) 1515, 2037
MaeI CTAG 4 cut(s) 339, 866, 890, 2409
MaeIII GTNAC 5 cut(s) 398, 713, 1403, 1698, 1762
MbiI CCGCTC 2 cut(s) 944, 2367
MfeI CAATTG 3 cut(s) 1178, 1484, 2325
MflI RGATCY 4 cut(s) 298, 1186, 2071, 2242
MhlI GDGCHC 1 cut(s) 1840
MlyI GAGTC 4 cut(s) 366, 455, 785, 2072
MmeI TCCRAC 2 cut(s) 1221, 2049
Mph1103I ATGCAT 2 cut(s) 757, 1056
MroXI GAANNNNTTC 1 cut(s) 392
MslI CAYNNNNRTG 3 cut(s) 1374, 1868, 2435
MspA1I CMGCKG 5 cut(s) 85, 91, 502, 834, 1843
MspCI CTTAAG 1 cut(s) 860
MspR9I CCNGG 2 cut(s) 1656, 2229
MunI CAATTG 3 cut(s) 1178, 1484, 2325
Mva1269I GAATGC 3 cut(s) 757, 1147, 1756
MvaI CCWGG 2 cut(s) 1656, 2229
MvnI CGCG 2 cut(s) 2304, 2402
MwoI GCNNNNNNNGC 5 cut(s) 88, 91, 136, 1210, 2399
NcoI CCATGG 1 cut(s) 319
NdeI CATATG 1 cut(s) 852
NlaIV GGNNCC 3 cut(s) 1588, 1631, 2185
NmuCI GTSAC 2 cut(s) 1403, 1698
NruI TCGCGA 1 cut(s) 2402
NsiI ATGCAT 2 cut(s) 757, 1056
NspI RCATGY 2 cut(s) 1204, 1351
NspV TTCGAA 1 cut(s) 677
PaeI GCATGC 1 cut(s) 1351
PaeR7I CTCGAG 1 cut(s) 2132
PagI TCATGA 2 cut(s) 220, 1906
PaqCI CACCTGC 1 cut(s) 1706
PctI GAATGC 3 cut(s) 757, 1147, 1756
PdmI GAANNNNTTC 1 cut(s) 392
PfeI GAWTC 8 cut(s) 427, 607, 796, 920, 1651, 1797, 1903, 2312
PkrI GCNGC 6 cut(s) 84, 87, 90, 93, 245, 2027
PleI GAGTC 4 cut(s) 366, 455, 784, 2071
PpsI GAGTC 4 cut(s) 366, 455, 784, 2071
PpuMI RGGWCCY 1 cut(s) 2168
PshAI GACNNNNGTC 1 cut(s) 1990
PshBI ATTAAT 1 cut(s) 1289
Psp5II RGGWCCY 1 cut(s) 2168
Psp6I CCWGG 2 cut(s) 1654, 2227
PspEI GGTNACC 1 cut(s) 713
PspFI CCCAGC 1 cut(s) 602
PspGI CCWGG 2 cut(s) 1654, 2227
PspN4I GGNNCC 3 cut(s) 1588, 1631, 2185
PspPI GGNCC 4 cut(s) 548, 1211, 2168, 2395
PspPPI RGGWCCY 1 cut(s) 2168
PspXI VCTCGAGB 1 cut(s) 2132
PstNI CAGNNNCTG 1 cut(s) 2321
PsuI RGATCY 4 cut(s) 298, 1186, 2071, 2242
PvuII CAGCTG 1 cut(s) 502
RruI TCGCGA 1 cut(s) 2402
RsaI GTAC 5 cut(s) 828, 838, 1065, 1614, 1856
RsaNI GTAC 5 cut(s) 827, 837, 1064, 1613, 1855
RseI CAYNNNNRTG 3 cut(s) 1374, 1868, 2435
SatI GCNGC 6 cut(s) 83, 86, 89, 92, 244, 2026
Sau96I GGNCC 4 cut(s) 548, 1211, 2168, 2395
ScaI AGTACT 1 cut(s) 1856
SchI GAGTC 4 cut(s) 366, 455, 785, 2072
ScrFI CCNGG 2 cut(s) 1656, 2229
SduI GDGCHC 1 cut(s) 1840
SfaNI GCATC 2 cut(s) 1515, 2037
SfcI CTRYAG 1 cut(s) 1979
Sfr274I CTCGAG 1 cut(s) 2132
SfuI TTCGAA 1 cut(s) 677
SinI GGWCC 3 cut(s) 548, 2168, 2395
SlaI CTCGAG 1 cut(s) 2132
SmiMI CAYNNNNRTG 3 cut(s) 1374, 1868, 2435
SmlI CTYRAG 6 cut(s) 860, 1100, 1529, 1933, 2060, 2132
SmoI CTYRAG 6 cut(s) 860, 1100, 1529, 1933, 2060, 2132
SpeI ACTAGT 1 cut(s) 338
SphI GCATGC 1 cut(s) 1351
SsiI CCGC 7 cut(s) 85, 91, 834, 942, 1841, 2367, 2393
SspI AATATT 2 cut(s) 2002, 2445
SspMI CTAG 4 cut(s) 339, 866, 890, 2409
StyD4I CCNGG 2 cut(s) 1654, 2227
StyI CCWWGG 3 cut(s) 319, 1163, 1502
TaaI ACNGT 5 cut(s) 841, 951, 1914, 2056, 2437
TaqI TCGA 5 cut(s) 450, 677, 1228, 1859, 2133
TaqII GACCGA 2 cut(s) 171, 1980
TatI WGTACW 2 cut(s) 826, 1854
TauI GCSGC 2 cut(s) 88, 94
TfiI GAWTC 8 cut(s) 427, 607, 796, 920, 1651, 1797, 1903, 2312
TscAI CASTG 5 cut(s) 1364, 1567, 1840, 2061, 2442
TseFI GTSAC 2 cut(s) 1403, 1698
TseI GCWGC 4 cut(s) 82, 88, 243, 2025
Tsp45I GTSAC 2 cut(s) 1403, 1698
TspGWI ACGGA 1 cut(s) 561
TspRI CASTG 5 cut(s) 1364, 1567, 1840, 2061, 2442
Vha464I CTTAAG 1 cut(s) 860
VpaK11BI GGWCC 3 cut(s) 548, 2168, 2395
VspI ATTAAT 1 cut(s) 1289
XapI RAATTY 9 cut(s) 957, 970, 1018, 1278, 1597, 1733, 1943, 1964, 2330
XceI RCATGY 2 cut(s) 1204, 1351
XhoI CTCGAG 1 cut(s) 2132
XmnI GAANNNNTTC 1 cut(s) 392
XspI CTAG 4 cut(s) 339, 866, 890, 2409
ZrmI AGTACT 1 cut(s) 1856
Zsp2I ATGCAT 2 cut(s) 757, 1056
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.