Rmu_sc0002048.1_g000018

Leucine rich repeat N-terminal domain

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002048.1
Physical Location & Seq
Forward (+)
67281 .. 71180
3900 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002048.1_g000018.1.cds

Sequence Viewer

Length: 3900 bp
atgggatcatctttgtggggcttcttttctgtgagttatattatactcttgttgctcattaatgctgcatgctgtttttcttttgtacaaacgcagacactttgccacgatgatgagcgctctgccttgttgcaattcaaagctagtttcacggtaaacaagtctgcttcccaagatccctttgcttatccgaaagttgcatattggggtaggctagaaggagatcctcaaaggagtaactgttgttcatgggatggtgttgaatgcaaccacgactctggccatgttattggccttgacctcgccagcagctgtcttcatggttccatcaactccaatagcagtctttttcaacttgttcagttgcagaggcttgacctctccgacaataacttcaactactctcaaataccatccaggttaggccatgatcttactagtctaacatatctcaacctatccatgtcttcattttctggccaaattccatcggaaatttcatatctatccaagttgtctgtccttgatctgtcttctagtgcttggcatcttctcaataaaacggccaacttcggaagcctagttcaaaacttgaccaacataaaacaacttcatcttagttgggtagagataggctccacagtgcctaattcgttggtgaatgtgtcttctctcacatctctccgtcttcaagaatgtgacttggagggggaattcccagtaggcattttccacctaccaaacttgcaagtacttgatttggccaataactataatctaagcggttactttcctgatgagcttaacaagagcagtcccttgaagatactgaatttgcggtcaaccaatttctctggtcatctacctgcttcaatcggaaaccttcgtgccttaaatttgttgaacatagcaaactgtcagttttatccccatattccatattcactttccaaccttacccagctcaatttccttgatctttcgtcctttttttccaacaagggtactttcagtggccaagttactgattcctggtcttgggttggaaagctgaccagacttaacaatttgtcccttgccgataccaacttaaggggagatttcccatgttttttggcgaatctgaagcaacttgtggaattagacttgagctacaatcaaataactggtgaaatcccatcttcttctttggctaatctgacgaaacttgtggaattacgcttgagctccaatcaaatgactgaaatctcatcttctttggctagtctgacgaaacttgtggaattagacttgagctccaatcaaataactggtgaaatcccatcttcttctttggctaatctgacgaaacttgtggaattacgcttgagctccaatcaaatgactgaaatctcatcttctttggctagtctgacgaaacttgtggaattagacttgagctccaatcaaataactggtgaaatcccatcttcttctttggctaatctgacgaaacttgtggaattacgcttgagctccaatcaaatgactgaaatctcatcttctttggctagtctgacgaaacttgtggaattagacttgagctccaatcaaataactggtgaaatcccatcttcttctttggctaatctgacgaaacttgtggaattacgcttgagctccaatcaaatgactgaaatctcatcttctttggctagtctgacgaaacttgtggaattagacttgagctccaatcaaataactggtgaaatcccatcttctttggctaatctgacgcaacttgtggaattacgcttgagctccaatcaaataactggtgaaatcccatcttctttggctagtctgacgaaacttgtggaattagacttgagctccaatcaaataactggtgaaatcccatcttctttggctaatctgacgcaacttgtggaattacgcttgaccaccaatcaaataactggtgaaatcccatcttctttggctagtctgacgaaacttgtggaattagacttgagcttcaatcaaattactggtgaaatcccatcttctttgggtaatctgaaacagctttcgatattaaccttgtaccaaaatcaaataactggtcaaatcccatcttgccttgggcagttgacccatttaacgatattggacgcaggattcaacaatctgcaaggaacaattcccaggtcactattcgagcttagaaatcttgaaatttttaaccttgactcaaataacttgagtgggtatgttgaattcgatgagttttccaagctcgaaaagttgacggcacttcgtttgtctttcaacaagttatccgtgcacatcaaaactggatctactgctattcctccagagcttgaagaactaggattgggttcatgcaacttaacagagtttccggaatttttgaaatacactagtaaactggtgtttctggatctagctgataacaatcttcagggccaaataccaaaatggatgtggaattcagctagcgaaaatttgtcgtatctcaacctctctcacaaccacttaactggatttgaagaaaatccggtcattattccatggcctcggttaatctatttagagctcggctctaacatgctacgaggatcactgccaattccagggccgtcaatggaactctattctgtttcaaacaatgaatacgcaggagaaattccagcaacattctgcaacgcgggggacctacgtgttcttgatttgtctagcaacaacctgaatggcatgattccccaatgttttgagaatctcagagctcttcagatattgaaactgcagaacaattcttttcacggggatattcctcgaataggttcaaacagatgtttgaacttagaagcgattgacttgagttataatcagctacaagggaagctaccaagatcaattgccaattgttctgggttggtgtttcttaatttgcgaaataatcagatcagtgataccttcccatcttggttaggaacacttcaactattaaaagttctcattttgcggtccaatgcattccatggcataattgggaagcctgcaagtagccatgagtttcctgagctgtccatcattgatttatctagcaacgatttttcaagtatgttgccctccgactacttagagaactggaatgccatgaaatctgttgatgcagacgcgcaaatatacgtccagtccggtttcagcttcgggaattactataaggcttacgatgattacccgattacagtttttagcaaaggtcgtgaattgaagtatgtcaagaccccttatcttctgagactcgtagacttctcaagtaacagatttcacggagagatcccaggtatcattgggaacctaagagggcttcatttgcttaatctttccaacaacactctcactggtctcatcccctcttctttggggaatttgagtgctcttgaatcgttggatctctcccaaaatcagctctcaggaaagctccccagtaatctggcgcaactgacattcctttcatacttcaatgtatcccataatcgtctctcggggtccattccacaaggtcgacaatttgacacattccaagaggatatgtaccaaggaaactcaggtttgtgtggaaaacctttgccaaagaaatgtgaagattctgagagcacaacaccacaaacatcaagctttgaacaagacgaggactctggatttcaaattgaactagattggtttgtggttctgccaggagttgttgctggtctaataggtggagtggttgggggggacttttggacaaccaagaaccatgactggtttgtggagacattcagcaggagttggcagccaagaggcataaggcaatggagggactcagaacttagacttcatatttattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1299

Amino Acids

143.29

Weight (kDa)

5.03

Isoelectric Point (pI)

39.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2889
Acc36I ACCTGC 1 cut(s) 874
AccI GTMKAC 2 cut(s) 3315, 3574
AccII CGCG 2 cut(s) 2711, 3185
AccIII TCCGGA 1 cut(s) 2404
AciI CCGC 4 cut(s) 783, 838, 2711, 3028
AclWI GGATC 8 cut(s) 13, 170, 218, 2347, 2451, 2629, 3340, 3468
AcoI YGGCCR 5 cut(s) 280, 478, 564, 762, 1015
AcuI CTGAAG 3 cut(s) 1145, 2447, 2777
AfaI GTAC 5 cut(s) 87, 753, 1006, 2087, 3605
AfeI AGCGCT 1 cut(s) 119
AfiI CCNNNNNNNGG 4 cut(s) 1038, 1092, 2636, 2843
AflII CTTAAG 1 cut(s) 1090
AflIII ACRYGT 1 cut(s) 2722
AhlI ACTAGT 2 cut(s) 437, 2423
AjnI CCWGG 6 cut(s) 416, 1031, 2186, 2635, 3349, 3745
AloI GAACNNNNNNTCC 2 cut(s) 567, 599
Alw26I GTCTC 4 cut(s) 3301, 3419, 3554, 3818
Alw44I GTGCAC 1 cut(s) 2324
AlwI GGATC 8 cut(s) 13, 170, 218, 2347, 2451, 2629, 3340, 3468
AlwNI CAGNNNCTG 1 cut(s) 312
Ama87I CYCGRG 1 cut(s) 3553
Aor13HI TCCGGA 1 cut(s) 2404
Aor51HI AGCGCT 1 cut(s) 119
ApaLI GTGCAC 1 cut(s) 2324
ApeKI GCWGC 3 cut(s) 65, 309, 3844
ArsI GACNNNNNNTTYG 2 cut(s) 2089, 2121
AseI ATTAAT 1 cut(s) 60
Asp700I GAANNNNTTC 1 cut(s) 2845
AspLEI GCGC 3 cut(s) 120, 3187, 3508
AspS9I GGNCC 5 cut(s) 2467, 2639, 2716, 3030, 3558
AsuNHI GCTAGC 1 cut(s) 2498
AvaI CYCGRG 1 cut(s) 3553
AvaII GGWCC 3 cut(s) 2716, 3030, 3558
BaeGI GKGCMC 1 cut(s) 2328
BalI TGGCCA 4 cut(s) 282, 480, 764, 1017
BbsI GAAGAC 5 cut(s) 308, 459, 525, 660, 680
BbvI GCAGC 3 cut(s) 52, 321, 3856
BceAI ACGGC 3 cut(s) 579, 2307, 2626
BciT130I CCWGG 6 cut(s) 418, 1033, 2188, 2637, 3351, 3747
BciVI GTATCC 1 cut(s) 3547
BcoDI GTCTC 4 cut(s) 3301, 3419, 3554, 3818
BcuI ACTAGT 2 cut(s) 437, 2423
BfmI CTRYAG 1 cut(s) 2807
BfoI RGCGCY 1 cut(s) 121
BfrI CTTAAG 1 cut(s) 1090
BfuAI ACCTGC 1 cut(s) 874
BfuI GTATCC 1 cut(s) 3547
BisI GCNGC 3 cut(s) 66, 310, 3845
BlsI GCNGC 3 cut(s) 67, 311, 3846
BmcAI AGTACT 1 cut(s) 753
Bme1390I CCNGG 6 cut(s) 418, 1033, 2188, 2637, 3351, 3747
Bme18I GGWCC 3 cut(s) 2716, 3030, 3558
BmeT110I CYCGRG 1 cut(s) 3553
BmgT120I GGNCC 5 cut(s) 2467, 2639, 2716, 3030, 3558
BmiI GGNNCC 5 cut(s) 325, 637, 2717, 3365, 3559
BmrFI CCNGG 6 cut(s) 418, 1033, 2188, 2637, 3351, 3747
BmrI ACTGGG 2 cut(s) 713, 3489
BmsI GCATC 2 cut(s) 556, 3166
BmtI GCTAGC 1 cut(s) 2502
BmuI ACTGGG 2 cut(s) 713, 3489
BpiI GAAGAC 5 cut(s) 308, 459, 525, 660, 680
BplI GAGNNNNNCTC 4 cut(s) 620, 652, 2588, 2620
BpmI CTGGAG 1 cut(s) 2340
Bpu10I CCTNAGC 1 cut(s) 3084
BsaAI YACGTR 1 cut(s) 2723
BsaBI GATNNNNATC 1 cut(s) 2457
BsaI GGTCTC 1 cut(s) 3419
BsaJI CCNNGG 8 cut(s) 2122, 2186, 2573, 2579, 2636, 3043, 3349, 3607
BsaWI WCCGGW 3 cut(s) 2404, 2560, 3203
Bsc4I CCNNNNNNNGG 4 cut(s) 1038, 1092, 2636, 2843
Bse3DI GCAATG 1 cut(s) 3869
Bse8I GATNNNNATC 1 cut(s) 2457
BseAI TCCGGA 1 cut(s) 2404
BseBI CCWGG 6 cut(s) 418, 1033, 2188, 2637, 3351, 3747
BseDI CCNNGG 8 cut(s) 2122, 2186, 2573, 2579, 2636, 3043, 3349, 3607
BseGI GGATG 4 cut(s) 259, 413, 2490, 3417
BseJI GATNNNNATC 1 cut(s) 2457
BseLI CCNNNNNNNGG 4 cut(s) 1038, 1092, 2636, 2843
BseMI GCAATG 1 cut(s) 3869
BseMII CTCAG 7 cut(s) 2797, 3075, 3296, 3495, 3630, 3651, 3888
BseSI GKGCMC 1 cut(s) 2328
BseXI GCAGC 3 cut(s) 52, 321, 3856
BseYI CCCAGC 1 cut(s) 960
Bsh1236I CGCG 2 cut(s) 2711, 3185
BsiHKCI CYCGRG 1 cut(s) 3553
BsiSI CCGG 3 cut(s) 2405, 2561, 3204
BslFI GGGAC 5 cut(s) 801, 1057, 2729, 3800, 3884
BslI CCNNNNNNNGG 4 cut(s) 1038, 1092, 2636, 2843
BsmAI GTCTC 4 cut(s) 3301, 3419, 3554, 3818
BsmBI CGTCTC 1 cut(s) 3554
BsmFI GGGAC 5 cut(s) 801, 1057, 2729, 3800, 3884
BsmI GAATGC 3 cut(s) 269, 3038, 3163
Bso31I GGTCTC 1 cut(s) 3419
BsoBI CYCGRG 1 cut(s) 3553
Bsp13I TCCGGA 1 cut(s) 2404
Bsp1407I TGTACA 1 cut(s) 85
Bsp19I CCATGG 2 cut(s) 2573, 3043
BspACI CCGC 4 cut(s) 783, 838, 2711, 3028
BspCNI CTCAG 7 cut(s) 2796, 3076, 3297, 3494, 3629, 3652, 3887
BspEI TCCGGA 1 cut(s) 2404
BspFNI CGCG 2 cut(s) 2711, 3185
BspLI GGNNCC 5 cut(s) 325, 637, 2717, 3365, 3559
BspMAI CTGCAG 1 cut(s) 2811
BspMI ACCTGC 1 cut(s) 874
BspOI GCTAGC 1 cut(s) 2502
BspPI GGATC 8 cut(s) 13, 170, 218, 2347, 2451, 2629, 3340, 3468
BspQI GCTCTTC 1 cut(s) 2796
BspTI CTTAAG 1 cut(s) 1090
BspTNI GGTCTC 1 cut(s) 3419
BsrDI GCAATG 1 cut(s) 3869
BsrGI TGTACA 1 cut(s) 85
BssECI CCNNGG 8 cut(s) 2122, 2186, 2573, 2579, 2636, 3043, 3349, 3607
BssT1I CCWWGG 4 cut(s) 2122, 2573, 3043, 3607
Bst2UI CCWGG 6 cut(s) 418, 1033, 2188, 2637, 3351, 3747
Bst4CI ACNGT 5 cut(s) 154, 242, 643, 917, 3256
Bst6I CTCTTC 2 cut(s) 2796, 3430
BstAFI CTTAAG 1 cut(s) 1090
BstAUI TGTACA 1 cut(s) 85
BstBAI YACGTR 1 cut(s) 2723
BstC8I GCNNGC 4 cut(s) 70, 307, 2500, 3063
BstDSI CCRYGG 2 cut(s) 2573, 3043
BstENI CCTNNNNNAGG 1 cut(s) 2841
BstF5I GGATG 4 cut(s) 259, 413, 2490, 3417
BstFNI CGCG 2 cut(s) 2711, 3185
BstH2I RGCGCY 1 cut(s) 121
BstHHI GCGC 3 cut(s) 120, 3187, 3508
BstMAI GTCTC 4 cut(s) 3301, 3419, 3554, 3818
BstMWI GCNNNNNNNGC 1 cut(s) 3382
BstNI CCWGG 6 cut(s) 418, 1033, 2188, 2637, 3351, 3747
BstNSI RCATGY 2 cut(s) 72, 2614
BstSCI CCNGG 6 cut(s) 416, 1031, 2186, 2635, 3349, 3745
BstSFI CTRYAG 1 cut(s) 2807
BstSLI GKGCMC 1 cut(s) 2328
BstUI CGCG 2 cut(s) 2711, 3185
BstV1I GCAGC 3 cut(s) 52, 321, 3856
BstV2I GAAGAC 5 cut(s) 308, 459, 525, 660, 680
BstX2I RGATCY 6 cut(s) 175, 223, 2339, 2443, 3345, 3460
BstXI CCANNNNNNTGG 4 cut(s) 278, 290, 2543, 3502
BstYI RGATCY 6 cut(s) 175, 223, 2339, 2443, 3345, 3460
BsuI GTATCC 1 cut(s) 3547
BtgI CCRYGG 2 cut(s) 2573, 3043
BtsCI GGATG 4 cut(s) 259, 413, 2490, 3417
BtsI GCAGTG 1 cut(s) 2624
BtsIMutI CAGTG 5 cut(s) 648, 1018, 2624, 2977, 3408
BveI ACCTGC 1 cut(s) 874
Cac8I GCNNGC 4 cut(s) 70, 307, 2500, 3063
CaiI CAGNNNCTG 1 cut(s) 312
CfoI GCGC 3 cut(s) 120, 3187, 3508
Cfr13I GGNCC 5 cut(s) 2467, 2639, 2716, 3030, 3558
CseI GACGC 4 cut(s) 1783, 1927, 2162, 3191
Csp6I GTAC 5 cut(s) 86, 752, 1005, 2086, 3604
CviQI GTAC 5 cut(s) 86, 752, 1005, 2086, 3604
EaeI YGGCCR 5 cut(s) 280, 478, 564, 762, 1015
Eam1104I CTCTTC 2 cut(s) 2796, 3430
EarI CTCTTC 2 cut(s) 2796, 3430
Eco130I CCWWGG 4 cut(s) 2122, 2573, 3043, 3607
Eco31I GGTCTC 1 cut(s) 3419
Eco47I GGWCC 3 cut(s) 2716, 3030, 3558
Eco47III AGCGCT 1 cut(s) 119
Eco57I CTGAAG 3 cut(s) 1145, 2447, 2777
Eco88I CYCGRG 1 cut(s) 3553
EcoNI CCTNNNNNAGG 1 cut(s) 2841
EcoO109I RGGNCCY 1 cut(s) 2716
EcoRI GAATTC 3 cut(s) 713, 2258, 2491
EcoRII CCWGG 6 cut(s) 416, 1031, 2186, 2635, 3349, 3745
EcoT14I CCWWGG 4 cut(s) 2122, 2573, 3043, 3607
EcoT22I ATGCAT 1 cut(s) 3040
ErhI CCWWGG 4 cut(s) 2122, 2573, 3043, 3607
Esp3I CGTCTC 1 cut(s) 3554
FaqI GGGAC 5 cut(s) 801, 1057, 2729, 3800, 3884
FauI CCCGC 1 cut(s) 2704
FblI GTMKAC 2 cut(s) 3315, 3574
Fnu4HI GCNGC 3 cut(s) 66, 310, 3845
FokI GGATG 4 cut(s) 266, 400, 2497, 3404
Fsp4HI GCNGC 3 cut(s) 66, 310, 3845
GlaI GCGC 3 cut(s) 119, 3186, 3507
GluI GCNGC 3 cut(s) 66, 310, 3845
GsaI CCCAGC 1 cut(s) 964
GsuI CTGGAG 1 cut(s) 2340
HaeII RGCGCY 1 cut(s) 121
HapII CCGG 3 cut(s) 2405, 2561, 3204
HgaI GACGC 4 cut(s) 1783, 1927, 2162, 3191
HhaI GCGC 3 cut(s) 120, 3187, 3508
Hin6I GCGC 3 cut(s) 118, 3185, 3506
HinP1I GCGC 3 cut(s) 118, 3185, 3506
HincII GTYRAC 4 cut(s) 843, 2133, 2289, 3575
HindII GTYRAC 4 cut(s) 843, 2133, 2289, 3575
HindIII AAGCTT 1 cut(s) 3685
HpaII CCGG 3 cut(s) 2405, 2561, 3204
Hpy166II GTNNAC 8 cut(s) 157, 843, 2133, 2289, 2326, 2429, 3316, 3575
Hpy8I GTNNAC 8 cut(s) 157, 843, 2133, 2289, 2326, 2429, 3316, 3575
HpyAV CCTTC 3 cut(s) 212, 893, 2989
HpyCH4III ACNGT 5 cut(s) 154, 242, 643, 917, 3256
HpyCH4IV ACGT 2 cut(s) 2722, 3195
HpyF10VI GCNNNNNNNGC 1 cut(s) 3382
HpySE526I ACGT 2 cut(s) 2722, 3195
HspAI GCGC 3 cut(s) 118, 3185, 3506
Kpn2I TCCGGA 1 cut(s) 2404
LguI GCTCTTC 1 cut(s) 2796
Lsp1109I GCAGC 3 cut(s) 52, 321, 3856
LweI GCATC 2 cut(s) 556, 3166
MaeII ACGT 2 cut(s) 2722, 3195
MaeIII GTNAC 6 cut(s) 236, 698, 785, 1021, 2190, 3326
MfeI CAATTG 2 cut(s) 2919, 2926
MflI RGATCY 6 cut(s) 175, 223, 2339, 2443, 3345, 3460
MlsI TGGCCA 4 cut(s) 282, 480, 764, 1017
MluNI TGGCCA 4 cut(s) 282, 480, 764, 1017
MlyI GAGTC 5 cut(s) 269, 2225, 3303, 3698, 3866
MmeI TCCRAC 7 cut(s) 408, 975, 1020, 1024, 3162, 3420, 3438
Mox20I TGGCCA 4 cut(s) 282, 480, 764, 1017
Mph1103I ATGCAT 1 cut(s) 3040
MroI TCCGGA 1 cut(s) 2404
MroXI GAANNNNTTC 1 cut(s) 2845
MscI TGGCCA 4 cut(s) 282, 480, 764, 1017
MslI CAYNNNNRTG 2 cut(s) 13, 111
Msp20I TGGCCA 4 cut(s) 282, 480, 764, 1017
MspA1I CMGCKG 1 cut(s) 312
MspCI CTTAAG 1 cut(s) 1090
MspI CCGG 3 cut(s) 2405, 2561, 3204
MspR9I CCNGG 6 cut(s) 418, 1033, 2188, 2637, 3351, 3747
MunI CAATTG 2 cut(s) 2919, 2926
Mva1269I GAATGC 3 cut(s) 269, 3038, 3163
MvaI CCWGG 6 cut(s) 418, 1033, 2188, 2637, 3351, 3747
MvnI CGCG 2 cut(s) 2711, 3185
MwoI GCNNNNNNNGC 1 cut(s) 3382
NcoI CCATGG 2 cut(s) 2573, 3043
NheI GCTAGC 1 cut(s) 2498
NlaIV GGNNCC 5 cut(s) 325, 637, 2717, 3365, 3559
NmeAIII GCCGAG 1 cut(s) 2580
NmuCI GTSAC 2 cut(s) 698, 2190
NsiI ATGCAT 1 cut(s) 3040
NspI RCATGY 2 cut(s) 72, 2614
PaeI GCATGC 1 cut(s) 72
PciSI GCTCTTC 1 cut(s) 2796
PctI GAATGC 3 cut(s) 269, 3038, 3163
PdmI GAANNNNTTC 1 cut(s) 2845
PfeI GAWTC 7 cut(s) 1028, 1120, 2160, 2761, 2779, 3452, 3656
PkrI GCNGC 3 cut(s) 67, 311, 3846
PleI GAGTC 5 cut(s) 269, 2225, 3303, 3698, 3866
PpsI GAGTC 5 cut(s) 269, 2225, 3303, 3698, 3866
Ppu21I YACGTR 1 cut(s) 2723
PpuMI RGGWCCY 1 cut(s) 2716
PshBI ATTAAT 1 cut(s) 60
PsiI TTATAA 1 cut(s) 2889
Psp5II RGGWCCY 1 cut(s) 2716
Psp6I CCWGG 6 cut(s) 416, 1031, 2186, 2635, 3349, 3745
PspFI CCCAGC 1 cut(s) 960
PspGI CCWGG 6 cut(s) 416, 1031, 2186, 2635, 3349, 3745
PspN4I GGNNCC 5 cut(s) 325, 637, 2717, 3365, 3559
PspPI GGNCC 5 cut(s) 2467, 2639, 2716, 3030, 3558
PspPPI RGGWCCY 1 cut(s) 2716
PsrI GAACNNNNNNTAC 2 cut(s) 229, 261
PstI CTGCAG 1 cut(s) 2811
PstNI CAGNNNCTG 1 cut(s) 312
PsuI RGATCY 6 cut(s) 175, 223, 2339, 2443, 3345, 3460
PvuII CAGCTG 1 cut(s) 312
RsaI GTAC 5 cut(s) 87, 753, 1006, 2087, 3605
RsaNI GTAC 5 cut(s) 86, 752, 1005, 2086, 3604
RseI CAYNNNNRTG 2 cut(s) 13, 111
SalI GTCGAC 1 cut(s) 3573
SapI GCTCTTC 1 cut(s) 2796
SatI GCNGC 3 cut(s) 66, 310, 3845
Sau96I GGNCC 5 cut(s) 2467, 2639, 2716, 3030, 3558
ScaI AGTACT 1 cut(s) 753
SchI GAGTC 5 cut(s) 269, 2225, 3303, 3698, 3866
ScrFI CCNGG 6 cut(s) 418, 1033, 2188, 2637, 3351, 3747
SfaNI GCATC 2 cut(s) 556, 3166
SfcI CTRYAG 1 cut(s) 2807
SinI GGWCC 3 cut(s) 2716, 3030, 3558
SmiMI CAYNNNNRTG 2 cut(s) 13, 111
SpeI ACTAGT 2 cut(s) 437, 2423
SphI GCATGC 1 cut(s) 72
SsiI CCGC 4 cut(s) 783, 838, 2711, 3028
StyD4I CCNGG 6 cut(s) 416, 1031, 2186, 2635, 3349, 3745
StyI CCWWGG 4 cut(s) 2122, 2573, 3043, 3607
TaaI ACNGT 5 cut(s) 154, 242, 643, 917, 3256
TaiI ACGT 2 cut(s) 2725, 3198
TaqI TCGA 6 cut(s) 2072, 2199, 2262, 2280, 2839, 3574
TatI WGTACW 2 cut(s) 85, 751
TfiI GAWTC 7 cut(s) 1028, 1120, 2160, 2761, 2779, 3452, 3656
TscAI CASTG 5 cut(s) 648, 1018, 2631, 2977, 3415
TseFI GTSAC 2 cut(s) 698, 2190
TseI GCWGC 3 cut(s) 65, 309, 3844
Tsp45I GTSAC 2 cut(s) 698, 2190
TspGWI ACGGA 3 cut(s) 674, 2311, 3354
TspRI CASTG 5 cut(s) 648, 1018, 2631, 2977, 3415
Vha464I CTTAAG 1 cut(s) 1090
VneI GTGCAC 1 cut(s) 2324
VpaK11BI GGWCC 3 cut(s) 2716, 3030, 3558
VspI ATTAAT 1 cut(s) 60
XagI CCTNNNNNAGG 1 cut(s) 2841
XceI RCATGY 2 cut(s) 72, 2614
XcmI CCANNNNNNNNNTGG 2 cut(s) 2484, 3050
XmiI GTMKAC 2 cut(s) 3315, 3574
XmnI GAANNNNTTC 1 cut(s) 2845
ZrmI AGTACT 1 cut(s) 753
Zsp2I ATGCAT 1 cut(s) 3040
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.