RchiOBHm_Chr1g0347861

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000024
Physical Location & Seq
Reverse (-)
40551635 .. 40554169
2535 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57396

Sequence Viewer

Length: 2535 bp
ATGGGGATATTGCAGGCCAATATTCGCATGGTTTCAGTATTAGTAGTTTTGCTGGTTCATCTTTTGGTTATTGCCGAGTCTTTGCAGAAGCAGGCATCTTGCTCGGATGAGGAGAGCTATGCCTTGCTTCAATTCAAGCATAGCTTTTTTATTAACATAGATGCTTCACTTCACGATGGCGCTCATTCAAAGACTTCATCATGGAAACCCGAAGGAGGAAATAGCAGCTGCTGCTCATGGGAGGGTGTTGAATGTGATGAAGGGACGGGTCATGTGATTGGCCTTGATCTTAGTAGCAGTCTTCTCTTTGGCTCTATCAACTCCAGCAGCACCCTCTTCCGTCTTGTTCATCTTCAGAGGCTGAATCTCTCTGATAATCACTTCAATTACTCTCAAATTCCTACTAACATTAGAAATTTTCCAAGGCTCAGGTATCTCGACCTCTCTGGCTCTGTGTTTTTTGGTCAAGTCCCATTGGAAGTTTCACACTTGTCCAAGTTGTCATCCCTGGACCTTTCTGATAACTTCCTTAATGGTCCATTTTCTGATTCATTAGCAAACCTTACTGAACTGACATACTTGTCGCTTGAAAATAACAATTTCAAAGGAAGTACTTTGTCCTGGGTTGGTAAGCTAACAAAACTTACTCAATTGCGTCTTGAAGGAACCAATTTAATTGGTAACATCCCATCTTCTCTAGGGAACCTCACACAGCTCACTTTTCTTGCTCTTCCTTACAATCAGCTAACTGGTCCAATCCCATCTTCGCTACGTAACCTTGGCAGTCTAGCTTATCTAGATCTTGGAGTGAATAAATTCCATAGTTCAATTCCAGAACCATTATTCAATCTTACGGATCTCAAGACCCTTTATCTAGATGAAAATGGCCTGACCGGTCAGGTAGACATTTTCAAGGTACAAAATATGACCGTTCTCCAACTAGGTGGTAACAAACTGGAAGTGATCACTGATTCCAGAACTATAGATGCAACTATACTTCCAATGTTTAAGACACTAGGATTGGGATCCTGCGGCATAAAAGAGTTCCCATATTTTCTAAGATATCAACAAAACTTGCAGTGGTTGGACCTTTCCAGAAATACATTGCATGGTCAAGTACCCAAATGGATGTGGAACACAAGCACACAAAGTTTGGGGTTCTTGGCCCTTTCTTACAACTTCCTTTCGGGCTTTGGCCAACCAAATGTTGTCCTTCCTTGGGTTAACCTACAAGTTTTATTTGTTGGACATAATTTGCTAGGTGGATCACCTCCCATACCTCCAAAGCACATCATCTATTATTCACTCGACGGCAACAAACTCACCGGGGAACTTTCACCATTAATGTGCAATCTAAGTACCCTTCAATACCTTGATTTGTCAAGTAACAAGTTGAGTGGCACCATTCTGCCGTGTCTTGGTAACTTCAGCAATGATCTACAAGCTTTAAATCTTCGAAGCAACTCTTTGCACGGCATTCTTCCTCAAACATACAGCAACACAAGCAACTTGAAGATGCTTGATGTCAGTTATAACCAATTGCTTGGGAAAATACCGAGGTCACTGGCGAATTGTGTGAAGCTTGAGTCTCTTGTTCTGTCAGTGAATAAATTCAGTGATGTTTTCCCCTTTTGGTTGGGCAGTCTCCCTCAGCTGAAACTCTTGGCGATGCACCACAATGAGTTCTATGGTGTGATTGAAAATACCAAAGAAAATCTTCATTTTTCTGAGTTGCGCATTCTTGACCTGTCTTGCAATAAATTCAGAGGAGAGTTTCCCTCTGAATACATCTTTTCTGGCAATGCCATGAGAGGTATAGTTCTAAGCCAACCCACATATATGGAGGCGAGCTCATATCTTAATATCGGTCATGCACAATTATTTTCTTATCAGTTCGAAGTCACGATCTCAAACAAAGGTGTCGAGAGATACTACGAGAATATTCAAGAAGACCTCGGGGTGATTGATATCTCAAGCAATAATTTCCATGGAAAAATTCCAGAATTTATTGGGAACTTGAAGGGGCTTCGCTTTGTCAATATTTCCAATAACATCTTCAACGGCAGCATCCCATCATTCTTCAAAAATTTGACATTGGTTGAAGCATTGGACCTTTCACAGAACCAGCTCTCAGGAGAGATTCCTCAGCAACTAGCACAGCTTACATCTCTTGCGTATTTTAATGTCTCCTGCAACAATCTCACTGGTTCTATACCGCAAGGGCACCAATTTCATACATTCGAGAACACTTCATTCGAGGGAAACCCGGGATTGTGTGGAGACCCTTTGACAAAGAGATGTGGGGACTCTAATGCCCCACCTCATCTACCACCTTCAAGCAGCATTGAAGAAAATGTTTCGGGATCTGCTTTTGAATTTGACTGGAAATTTGTGTTGGCCGGATTTGGAAGTGGGTTGCTGGTGGGAGTGGTACTTGCAGACGTGGCGATCACACGGAGGCGTGAGTTGTTTCTTGACATAGTTGGGACGATGATCAGACAAATGAAAAGGATCAGAAGGCAGAGGATGTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

844

Amino Acids

93.76

Weight (kDa)

6.17

Isoelectric Point (pI)

41.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 36 - 86 3.2e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 107 - 219 1.1e-09 Leucine-rich repeat region
LRR_14 PF23598 180 - 391 1.7e-11 Leucine-rich repeat region
LRR_8 PF13855 480 - 537 7.1e-09 Leucine rich repeat
LRR_8 PF13855 676 - 734 9.1e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1533
AasI GACNNNNNNGTC 1 cut(s) 580
Acc16I TGCGCA 1 cut(s) 1736
AccB1I GGYRCC 2 cut(s) 1400, 2223
AccI GTMKAC 1 cut(s) 903
AciI CCGC 2 cut(s) 1032, 2216
AclWI GGATC 6 cut(s) 864, 1020, 1033, 1273, 2371, 2519
AcoI YGGCCR 2 cut(s) 1195, 2397
AcuI CTGAAG 2 cut(s) 338, 1411
AfaI GTAC 6 cut(s) 613, 918, 1119, 1360, 2433, 2531
AfiI CCNNNNNNNGG 3 cut(s) 215, 1219, 1418
AgeI ACCGGT 1 cut(s) 893
AjiI CACGTC 1 cut(s) 2443
AjnI CCWGG 2 cut(s) 507, 620
AjuI GAANNNNNNNTTGG 6 cut(s) 748, 780, 2039, 2071, 2378, 2410
Alw21I GWGCWC 1 cut(s) 1853
Alw26I GTCTC 4 cut(s) 1593, 1649, 2191, 2274
AlwI GGATC 6 cut(s) 864, 1020, 1033, 1273, 2371, 2519
AlwNI CAGNNNCTG 2 cut(s) 231, 361
Ama87I CYCGRG 2 cut(s) 1955, 2266
AoxI GGCC 6 cut(s) 15, 280, 886, 1164, 1195, 2397
ApeKI GCWGC 6 cut(s) 225, 228, 231, 327, 2064, 2340
ArsI GACNNNNNNTTYG 2 cut(s) 2372, 2404
AseI ATTAAT 1 cut(s) 1343
AsiGI ACCGGT 1 cut(s) 893
Asp700I GAANNNNTTC 3 cut(s) 815, 1610, 1716
AspLEI GCGC 2 cut(s) 182, 1737
AspS9I GGNCC 6 cut(s) 511, 536, 752, 1087, 1165, 2110
AsuC2I CCSGG 3 cut(s) 1327, 2267, 2268
AsuHPI GGTGA 4 cut(s) 1260, 1315, 1329, 1972
AsuII TTCGAA 2 cut(s) 1456, 1896
AvaI CYCGRG 2 cut(s) 1955, 2266
AvaII GGWCC 5 cut(s) 511, 536, 752, 1087, 2110
BaeGI GKGCMC 1 cut(s) 2226
BalI TGGCCA 1 cut(s) 1197
BamHI GGATCC 1 cut(s) 1025
BanI GGYRCC 2 cut(s) 1400, 2223
BanII GRGCYC 1 cut(s) 1853
BbsI GAAGAC 2 cut(s) 293, 1956
Bbv12I GWGCWC 1 cut(s) 1853
BbvCI CCTCAGC 2 cut(s) 1650, 2145
BbvI GCAGC 6 cut(s) 215, 218, 237, 339, 2076, 2352
BccI CCATC 4 cut(s) 170, 697, 769, 2080
BceAI ACGGC 4 cut(s) 1327, 1396, 1489, 2077
BcgI CGANNNNNNTGC 2 cut(s) 84, 118
BciT130I CCWGG 2 cut(s) 509, 622
BclI TGATCA 2 cut(s) 963, 2493
BcnI CCSGG 3 cut(s) 1327, 2267, 2268
BcoDI GTCTC 4 cut(s) 1593, 1649, 2191, 2274
BfaI CTAG 8 cut(s) 698, 788, 797, 875, 941, 1016, 1259, 2153
BfmI CTRYAG 1 cut(s) 981
BfoI RGCGCY 1 cut(s) 183
BglII AGATCT 1 cut(s) 799
BisI GCNGC 7 cut(s) 226, 229, 232, 328, 1033, 2065, 2341
BlsI GCNGC 7 cut(s) 227, 230, 233, 329, 1034, 2066, 2342
BmcAI AGTACT 1 cut(s) 613
Bme1390I CCNGG 5 cut(s) 509, 622, 1327, 2267, 2268
Bme18I GGWCC 5 cut(s) 511, 536, 752, 1087, 2110
BmeT110I CYCGRG 2 cut(s) 1955, 2266
BmgBI CACGTC 1 cut(s) 2443
BmgT120I GGNCC 6 cut(s) 511, 536, 752, 1087, 1165, 2110
BmiI GGNNCC 5 cut(s) 667, 704, 1027, 1402, 2225
BmrFI CCNGG 5 cut(s) 509, 622, 1327, 2267, 2268
BmsI GCATC 6 cut(s) 104, 151, 976, 1506, 1659, 2076
BpiI GAAGAC 2 cut(s) 293, 1956
BplI GAGNNNNNCTC 4 cut(s) 1763, 1795, 1835, 1867
BpmI CTGGAG 1 cut(s) 307
Bpu10I CCTNAGC 3 cut(s) 428, 1650, 2145
Bpu14I TTCGAA 2 cut(s) 1456, 1896
BpuEI CTTGAG 3 cut(s) 845, 1604, 1957
BpuMI CCSGG 3 cut(s) 1327, 2267, 2268
BsaAI YACGTR 1 cut(s) 773
BsaBI GATNNNNATC 2 cut(s) 1024, 1967
BsaI GGTCTC 1 cut(s) 2274
BsaWI WCCGGW 1 cut(s) 893
Bsc4I CCNNNNNNNGG 3 cut(s) 215, 1219, 1418
Bse118I RCCGGY 1 cut(s) 893
Bse1I ACTGG 5 cut(s) 754, 960, 1569, 2209, 2387
Bse3DI GCAATG 3 cut(s) 1103, 1438, 1807
Bse8I GATNNNNATC 2 cut(s) 1024, 1967
BseBI CCWGG 2 cut(s) 509, 622
BseGI GGATG 6 cut(s) 112, 503, 684, 1134, 2067, 2532
BseJI GATNNNNATC 2 cut(s) 1024, 1967
BseLI CCNNNNNNNGG 3 cut(s) 215, 1219, 1418
BseMI GCAATG 3 cut(s) 1103, 1438, 1807
BseMII CTCAG 5 cut(s) 442, 1664, 1719, 2145, 2159
BseNI ACTGG 5 cut(s) 754, 960, 1569, 2209, 2387
BseRI GAGGAG 2 cut(s) 125, 1782
BseSI GKGCMC 1 cut(s) 2226
BseXI GCAGC 6 cut(s) 215, 218, 237, 339, 2076, 2352
BshFI GGCC 6 cut(s) 17, 282, 888, 1166, 1197, 2399
BshNI GGYRCC 2 cut(s) 1400, 2223
BshTI ACCGGT 1 cut(s) 893
BsiHKAI GWGCWC 1 cut(s) 1853
BsiHKCI CYCGRG 2 cut(s) 1955, 2266
BsiSI CCGG 4 cut(s) 894, 1326, 2267, 2400
BslFI GGGAC 4 cut(s) 277, 455, 2318, 2500
BslI CCNNNNNNNGG 3 cut(s) 215, 1219, 1418
BsmAI GTCTC 4 cut(s) 1593, 1649, 2191, 2274
BsmFI GGGAC 4 cut(s) 277, 455, 2318, 2500
BsmI GAATGC 2 cut(s) 1476, 1737
BsnI GGCC 6 cut(s) 17, 282, 888, 1166, 1197, 2399
Bso31I GGTCTC 1 cut(s) 2274
BsoBI CYCGRG 2 cut(s) 1955, 2266
Bsp119I TTCGAA 2 cut(s) 1456, 1896
Bsp1286I GDGCHC 2 cut(s) 1853, 2226
Bsp19I CCATGG 1 cut(s) 1987
BspACI CCGC 2 cut(s) 1032, 2216
BspANI GGCC 6 cut(s) 17, 282, 888, 1166, 1197, 2399
BspCNI CTCAG 5 cut(s) 441, 1663, 1720, 2144, 2158
BspLI GGNNCC 5 cut(s) 667, 704, 1027, 1402, 2225
BspPI GGATC 6 cut(s) 864, 1020, 1033, 1273, 2371, 2519
BspQI GCTCTTC 1 cut(s) 735
BspT104I TTCGAA 2 cut(s) 1456, 1896
BspT107I GGYRCC 2 cut(s) 1400, 2223
BspTNI GGTCTC 1 cut(s) 2274
BsrDI GCAATG 3 cut(s) 1103, 1438, 1807
BsrFI RCCGGY 1 cut(s) 893
BsrI ACTGG 5 cut(s) 754, 960, 1569, 2209, 2387
BssAI RCCGGY 1 cut(s) 893
BssT1I CCWWGG 4 cut(s) 422, 778, 1217, 1987
Bst2UI CCWGG 2 cut(s) 509, 622
Bst4CI ACNGT 1 cut(s) 931
Bst6I CTCTTC 2 cut(s) 341, 735
BstAPI GCANNNNNTGC 1 cut(s) 231
BstBAI YACGTR 1 cut(s) 773
BstBI TTCGAA 2 cut(s) 1456, 1896
BstC8I GCNNGC 3 cut(s) 15, 93, 1849
BstDEI CTNAG 9 cut(s) 290, 428, 1058, 1355, 1650, 1728, 1823, 2131, 2145
BstDSI CCRYGG 1 cut(s) 1987
BstF5I GGATG 6 cut(s) 112, 503, 684, 1134, 2067, 2532
BstH2I RGCGCY 1 cut(s) 183
BstHHI GCGC 2 cut(s) 182, 1737
BstMAI GTCTC 4 cut(s) 1593, 1649, 2191, 2274
BstMWI GCNNNNNNNGC 3 cut(s) 231, 1503, 2444
BstNI CCWGG 2 cut(s) 509, 622
BstSCI CCNGG 5 cut(s) 507, 620, 1325, 2265, 2266
BstSFI CTRYAG 1 cut(s) 981
BstSLI GKGCMC 1 cut(s) 2226
BstSNI TACGTA 1 cut(s) 773
BstV1I GCAGC 6 cut(s) 215, 218, 237, 339, 2076, 2352
BstV2I GAAGAC 2 cut(s) 293, 1956
BstX2I RGATCY 4 cut(s) 799, 856, 1025, 2363
BstXI CCANNNNNNTGG 3 cut(s) 944, 1544, 1840
BstYI RGATCY 4 cut(s) 799, 856, 1025, 2363
BsuRI GGCC 6 cut(s) 17, 282, 888, 1166, 1197, 2399
BtgI CCRYGG 1 cut(s) 1987
BtgZI GCGATG 1 cut(s) 1682
BtrI CACGTC 1 cut(s) 2443
BtsCI GGATG 6 cut(s) 112, 503, 684, 1134, 2067, 2532
BtsI GCAGTG 1 cut(s) 1085
BtsIMutI CAGTG 6 cut(s) 966, 1085, 1562, 1608, 1621, 2202
Cac8I GCNNGC 3 cut(s) 15, 93, 1849
CaiI CAGNNNCTG 2 cut(s) 231, 361
CfoI GCGC 2 cut(s) 182, 1737
Cfr10I RCCGGY 1 cut(s) 893
Cfr13I GGNCC 6 cut(s) 511, 536, 752, 1087, 1165, 2110
Cfr9I CCCGGG 1 cut(s) 2266
CseI GACGC 1 cut(s) 644
Csp6I GTAC 6 cut(s) 612, 917, 1118, 1359, 2432, 2530
CspAI ACCGGT 1 cut(s) 893
CspCI CAANNNNNGTGG 2 cut(s) 1378, 1413
CviAII CATG 8 cut(s) 28, 201, 237, 272, 1109, 1807, 1871, 1988
CviQI GTAC 6 cut(s) 612, 917, 1118, 1359, 2432, 2530
DdeI CTNAG 9 cut(s) 290, 428, 1058, 1355, 1650, 1728, 1823, 2131, 2145
DraI TTTAAA 1 cut(s) 1449
DrdI GACNNNNNNGTC 1 cut(s) 580
DseDI GACNNNNNNGTC 1 cut(s) 580
EaeI YGGCCR 2 cut(s) 1195, 2397
Eam1104I CTCTTC 2 cut(s) 341, 735
EarI CTCTTC 2 cut(s) 341, 735
Ecl136II GAGCTC 1 cut(s) 1851
Eco105I TACGTA 1 cut(s) 773
Eco130I CCWWGG 4 cut(s) 422, 778, 1217, 1987
Eco24I GRGCYC 1 cut(s) 1853
Eco31I GGTCTC 1 cut(s) 2274
Eco32I GATATC 2 cut(s) 1064, 1969
Eco47I GGWCC 5 cut(s) 511, 536, 752, 1087, 2110
Eco53kI GAGCTC 1 cut(s) 1851
Eco57I CTGAAG 2 cut(s) 338, 1411
Eco88I CYCGRG 2 cut(s) 1955, 2266
EcoICRI GAGCTC 1 cut(s) 1851
EcoRII CCWGG 2 cut(s) 507, 620
EcoRV GATATC 2 cut(s) 1064, 1969
EcoT14I CCWWGG 4 cut(s) 422, 778, 1217, 1987
EcoT38I GRGCYC 1 cut(s) 1853
ErhI CCWWGG 4 cut(s) 422, 778, 1217, 1987
FaeI CATG 8 cut(s) 31, 204, 240, 275, 1112, 1810, 1874, 1991
FalI AAGNNNNNCTT 6 cut(s) 128, 160, 1450, 1482, 1701, 1733
FaqI GGGAC 4 cut(s) 277, 455, 2318, 2500
FatI CATG 8 cut(s) 27, 200, 236, 271, 1108, 1806, 1870, 1987
FbaI TGATCA 2 cut(s) 963, 2493
FblI GTMKAC 1 cut(s) 903
Fnu4HI GCNGC 7 cut(s) 226, 229, 232, 328, 1033, 2065, 2341
FokI GGATG 5 cut(s) 119, 490, 671, 1141, 2054
FriOI GRGCYC 1 cut(s) 1853
Fsp4HI GCNGC 7 cut(s) 226, 229, 232, 328, 1033, 2065, 2341
FspBI CTAG 8 cut(s) 698, 788, 797, 875, 941, 1016, 1259, 2153
FspI TGCGCA 1 cut(s) 1736
GlaI GCGC 2 cut(s) 181, 1736
GluI GCNGC 7 cut(s) 226, 229, 232, 328, 1033, 2065, 2341
GsuI CTGGAG 1 cut(s) 307
HaeII RGCGCY 1 cut(s) 183
HaeIII GGCC 6 cut(s) 17, 282, 888, 1166, 1197, 2399
HapII CCGG 4 cut(s) 894, 1326, 2267, 2400
HgaI GACGC 1 cut(s) 644
HhaI GCGC 2 cut(s) 182, 1737
Hin1II CATG 8 cut(s) 31, 204, 240, 275, 1112, 1810, 1874, 1991
Hin6I GCGC 2 cut(s) 180, 1735
HinP1I GCGC 2 cut(s) 180, 1735
HincII GTYRAC 1 cut(s) 1225
HindII GTYRAC 1 cut(s) 1225
HindIII AAGCTT 2 cut(s) 1443, 1580
HinfI GANTC 7 cut(s) 77, 364, 548, 971, 1586, 2140, 2306
HpaI GTTAAC 1 cut(s) 1225
HpaII CCGG 4 cut(s) 894, 1326, 2267, 2400
HphI GGTGA 4 cut(s) 1260, 1315, 1329, 1972
Hpy166II GTNNAC 2 cut(s) 904, 1225
Hpy8I GTNNAC 2 cut(s) 904, 1225
Hpy99I CGWCG 1 cut(s) 1313
HpyAV CCTTC 8 cut(s) 206, 254, 656, 1223, 1373, 2014, 2343, 2511
HpyCH4III ACNGT 1 cut(s) 931
HpyCH4IV ACGT 2 cut(s) 772, 2442
HpyF10VI GCNNNNNNNGC 3 cut(s) 231, 1503, 2444
HpyF3I CTNAG 9 cut(s) 290, 428, 1058, 1355, 1650, 1728, 1823, 2131, 2145
HpySE526I ACGT 2 cut(s) 772, 2442
Hsp92II CATG 8 cut(s) 31, 204, 240, 275, 1112, 1810, 1874, 1991
HspAI GCGC 2 cut(s) 180, 1735
Ksp22I TGATCA 2 cut(s) 963, 2493
KspAI GTTAAC 1 cut(s) 1225
LguI GCTCTTC 1 cut(s) 735
Lsp1109I GCAGC 6 cut(s) 215, 218, 237, 339, 2076, 2352
LweI GCATC 6 cut(s) 104, 151, 976, 1506, 1659, 2076
MaeI CTAG 8 cut(s) 698, 788, 797, 875, 941, 1016, 1259, 2153
MaeII ACGT 2 cut(s) 772, 2442
MaeIII GTNAC 7 cut(s) 680, 773, 947, 1385, 1421, 1560, 1900
MfeI CAATTG 2 cut(s) 650, 1538
MflI RGATCY 4 cut(s) 799, 856, 1025, 2363
MhlI GDGCHC 2 cut(s) 1853, 2226
MlsI TGGCCA 1 cut(s) 1197
MluNI TGGCCA 1 cut(s) 1197
MlyI GAGTC 3 cut(s) 86, 1595, 2300
MmeI TCCRAC 3 cut(s) 961, 1065, 1225
Mox20I TGGCCA 1 cut(s) 1197
MroXI GAANNNNTTC 3 cut(s) 815, 1610, 1716
MscI TGGCCA 1 cut(s) 1197
MseI TTAA 9 cut(s) 153, 531, 674, 1008, 1224, 1343, 1448, 1860, 2181
MslI CAYNNNNRTG 3 cut(s) 1345, 1677, 1838
Msp20I TGGCCA 1 cut(s) 1197
MspA1I CMGCKG 2 cut(s) 228, 1654
MspI CCGG 4 cut(s) 894, 1326, 2267, 2400
MspR9I CCNGG 5 cut(s) 509, 622, 1327, 2267, 2268
MunI CAATTG 2 cut(s) 650, 1538
Mva1269I GAATGC 2 cut(s) 1476, 1737
MvaI CCWGG 2 cut(s) 509, 622
MwoI GCNNNNNNNGC 3 cut(s) 231, 1503, 2444
NciI CCSGG 3 cut(s) 1327, 2267, 2268
NcoI CCATGG 1 cut(s) 1987
NlaIII CATG 8 cut(s) 31, 204, 240, 275, 1112, 1810, 1874, 1991
NlaIV GGNNCC 5 cut(s) 667, 704, 1027, 1402, 2225
NmeAIII GCCGAG 1 cut(s) 100
NmuCI GTSAC 2 cut(s) 1560, 1900
NsbI TGCGCA 1 cut(s) 1736
NspV TTCGAA 2 cut(s) 1456, 1896
PciSI GCTCTTC 1 cut(s) 735
PctI GAATGC 2 cut(s) 1476, 1737
PdmI GAANNNNTTC 3 cut(s) 815, 1610, 1716
PfeI GAWTC 4 cut(s) 364, 548, 971, 2140
PinAI ACCGGT 1 cut(s) 893
PkrI GCNGC 7 cut(s) 227, 230, 233, 329, 1034, 2066, 2342
PleI GAGTC 3 cut(s) 85, 1594, 2300
PpsI GAGTC 3 cut(s) 85, 1594, 2300
Ppu21I YACGTR 1 cut(s) 773
PshBI ATTAAT 1 cut(s) 1343
PsiI TTATAA 1 cut(s) 1533
Psp124BI GAGCTC 1 cut(s) 1853
Psp6I CCWGG 2 cut(s) 507, 620
PspGI CCWGG 2 cut(s) 507, 620
PspN4I GGNNCC 5 cut(s) 667, 704, 1027, 1402, 2225
PspPI GGNCC 6 cut(s) 511, 536, 752, 1087, 1165, 2110
PstNI CAGNNNCTG 2 cut(s) 231, 361
PsuI RGATCY 4 cut(s) 799, 856, 1025, 2363
PvuII CAGCTG 2 cut(s) 228, 1654
RsaI GTAC 6 cut(s) 613, 918, 1119, 1360, 2433, 2531
RsaNI GTAC 6 cut(s) 612, 917, 1118, 1359, 2432, 2530
RseI CAYNNNNRTG 3 cut(s) 1345, 1677, 1838
SacI GAGCTC 1 cut(s) 1853
SapI GCTCTTC 1 cut(s) 735
SaqAI TTAA 9 cut(s) 153, 531, 674, 1008, 1224, 1343, 1448, 1860, 2181
SatI GCNGC 7 cut(s) 226, 229, 232, 328, 1033, 2065, 2341
Sau96I GGNCC 6 cut(s) 511, 536, 752, 1087, 1165, 2110
ScaI AGTACT 1 cut(s) 613
SchI GAGTC 3 cut(s) 86, 1595, 2300
ScrFI CCNGG 5 cut(s) 509, 622, 1327, 2267, 2268
SduI GDGCHC 2 cut(s) 1853, 2226
SfaNI GCATC 6 cut(s) 104, 151, 976, 1506, 1659, 2076
SfcI CTRYAG 1 cut(s) 981
SfuI TTCGAA 2 cut(s) 1456, 1896
SinI GGWCC 5 cut(s) 511, 536, 752, 1087, 2110
SmaI CCCGGG 1 cut(s) 2268
SmiMI CAYNNNNRTG 3 cut(s) 1345, 1677, 1838
SmlI CTYRAG 3 cut(s) 860, 1583, 1972
SmoI CTYRAG 3 cut(s) 860, 1583, 1972
SnaBI TACGTA 1 cut(s) 773
SsiI CCGC 2 cut(s) 1032, 2216
SspI AATATT 3 cut(s) 22, 1942, 2041
SspMI CTAG 8 cut(s) 698, 788, 797, 875, 941, 1016, 1259, 2153
SstI GAGCTC 1 cut(s) 1853
StyD4I CCNGG 5 cut(s) 507, 620, 1325, 2265, 2266
StyI CCWWGG 4 cut(s) 422, 778, 1217, 1987
TaaI ACNGT 1 cut(s) 931
TaiI ACGT 2 cut(s) 775, 2445
TaqI TCGA 7 cut(s) 438, 1308, 1456, 1896, 1923, 2241, 2256
TaqII GACCGA 1 cut(s) 1856
TatI WGTACW 2 cut(s) 611, 2529
TauI GCSGC 1 cut(s) 1035
TfiI GAWTC 4 cut(s) 364, 548, 971, 2140
Tru1I TTAA 9 cut(s) 153, 531, 674, 1008, 1224, 1343, 1448, 1860, 2181
Tru9I TTAA 9 cut(s) 153, 531, 674, 1008, 1224, 1343, 1448, 1860, 2181
TscAI CASTG 6 cut(s) 973, 1085, 1569, 1608, 1621, 2209
TseFI GTSAC 2 cut(s) 1560, 1900
TseI GCWGC 6 cut(s) 225, 228, 231, 327, 2064, 2340
Tsp45I GTSAC 2 cut(s) 1560, 1900
TspGWI ACGGA 3 cut(s) 329, 869, 2470
TspMI CCCGGG 1 cut(s) 2266
TspRI CASTG 6 cut(s) 973, 1085, 1569, 1608, 1621, 2209
VpaK11BI GGWCC 5 cut(s) 511, 536, 752, 1087, 2110
VspI ATTAAT 1 cut(s) 1343
XbaI TCTAGA 2 cut(s) 796, 874
XcmI CCANNNNNNNNNTGG 1 cut(s) 25
XmaI CCCGGG 1 cut(s) 2266
XmiI GTMKAC 1 cut(s) 903
XmnI GAANNNNTTC 3 cut(s) 815, 1610, 1716
XspI CTAG 8 cut(s) 698, 788, 797, 875, 941, 1016, 1259, 2153
ZrmI AGTACT 1 cut(s) 613
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.