RchiOBHm_Chr6g0257441

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000024
Physical Location & Seq
Reverse (-)
12823531 .. 12826799
3269 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ23090

Sequence Viewer

Length: 3120 bp
ATGCTTTGTATCAAAATATCAATTATGGGGCTATCACTGAGCTTGTGGAATAGTCGCATGCTTTCGAAACGAGTAGTTCTCTTCATGTTTCATTTCTTGGTTATTGCCAACTCTTTACACTCTCTGCAGCAGCCGTCATCTTCCTGCCATGATGAGGAGAGCTTCGCCTTGCTCCAGTTTAAGCAAAGCTTTGTCATCGACGAATTTGCTTCTGTTGATGAGGGTGCTTATCCAAAGGTTTTGTCATGGAAACCAGCTGCTGCTAAAGGATGCTGCTCGTGGGACGGGGTCGAGTGTGATGAGAAGACAGGTCATGTTATTGGACTTGATCTTAGTAGTAGCTGTCTCTCCGGCTCTATCAGCTCCAACAACACCCTCTTCCGTCTTGTTCATCTTCAGAGGCTGAACCTTGCGGACAATAACTTCAATCAATCTCAAATTCCTCCTACCATCAGGAATTTTCGAATGCTCAGTTATCTTAACCTCTCTGCCTCTTCCTTTTCTGGTCAAATCCCATCTGAAATTTCTCAATTGTCCAGGTTGTCGTCCCTTGATCTATCCTCCAATAGTGACAGTACCGGTGAAAGATCACTGAAGCTAAACCAGTCCAATCTAAAGAGGCTAGTTCAAAACTTGACGAGTCTAGAAAAGCTTCATCTCAGCTCCATCGTCATTTCTGCACCAATACCCAATTCCATGGCAAATTTATCATTTTTGACATCTCTCCTCCTAGAGTATTGCGAGCTGCAAGGCGAATTCCCAGTAAGTATTTTAAAATTACAGAGTTTAAAATTTCTTAATGTAGAATCCAATCCAGATCTAAAAGGTTTTTTGCCGGCATTTGAACAAACTAGTCCTCTCATGTCACTGAGAGTTTCCAGAACAAGGTTTTCAGGAGATCTCCCTTTTTCTATTGAAAAGCTTGATTCACTGAATGAGTTGGTTGCTAGTCGATGCAATTTTTCAGGGTTGCTTCCATCTTCACTCGGTAATCTTAGGCGGCTGGTTTATTTAGACCTTTCCAATAACACACTTACTGGCTCAATCCCTGCTTCTTTGGCAACCCTTACCCAACTGTCACATCTGTCACTTGATACTAATCATTTCAGTGGTTACATCCCGTCTTCTCTTGGAAATCTAACCCACCTCACAACACTTTCGCTTGCATCAAATCAATTAACTGGTCCAATCCCATCTTCTCTAGGAAACCTCACCCAGGTCACTGAGTTAGACCTTTCTGGTAATGATTTCGGTGGTTACATCCCGTCTTCCATTGGAAATCTCAACCAGCTCGTAAGACTTTCGCTTTCTATGAATCAATTAACTGGGCCAATCCCCTCTTCAGTAGGAAATCTTAGCAAACTAATTGAGTTAGATCTTTTTTCAAATAATTTGCACAGTTCCATTCCTGAGTCCTTATCCAATCTCACGAATCTCGTGACACTTTATCTAGATAGTAATAGTCTGAGCGGCAGAGTGAATTTCCACATGTTTCTGAAGCTGCAAAATCTCCTCATACTGTATTTATCTGGAAATAAATTGGAATTATTGCTCGAAGAGACAAGATTTATGAATGCAACAACAACTTTTCCAAAGTTTATTACTCTGGGATTGGGTTCTTGCAACATAACAGAGTTCCCAAGTTTCCTAAGATATCAAGAAAACTTGCGATGGCTGGATCTTGCTGAGAATGGAATGCATGGCCAATTACCGAGATGGATGTGGAATGTAAGCAAAGAAAGTTTGACAGTCATGAACATTTCTCATAACTTCCTTTCTGGGTTTGACCATCCTCCAGTTGTTCTTTCGTGGAGCGGCCTACAACTCTTGGATCTTTCATCCAACATGATTCAGGGATCACTACTGATACCTTCACCATCCATCGAGTACTATGTAATTTCAAACAACGGGTTAAGTGGACAAGTTTCACCTTTGATTTGCAATCTGGATTCTCTGAAGTACCTAGATTTGTCAAATAACAAGTTGAGCGGCATGCTGCCGCAGTGTCTTGGGAATTTCAGTGATAACTTGCGAGTTTTACATCTCGGAAACAACTCTTTTGAAGGCCACCTCCCGCAAGCATACACAAGCAATCTGACGATGATTGATGTTAGTAATAACAAACTGCAGGGGATATTACCAAGGTCTTTGGTGAATTGTGTGATGCTTGAGTTTCTTGTTATATCAAACAATGAATTCAATGATGTTTTCCCTCTTTGGTTGGGGACTCTCCCAGCATTGAGACTCTTGGCAATGCACCATAATGGGTTCCATGGGGTGATAAGGAAACCTGAAAAGAATCTAGATCATTTCCTTCAGTTGCACATTCTTGATCTATCTTTCAACAATTTCTCAGGCAACTTCCCCTTTGAATACATCTTCTCTGGAAATGTAATCAAAGGTATCACTTCGAATGAGTTCACATACATGAAGACAACCTCAGATATTGTTTATGATCCTTCATATCGTGGCGGGTATTTCTCCTTCACAATAACAAGTAAAGGTGTGGAAAGATTCTATCCCAAGATTCGAGAGGACTTTGCTGCCATTGACATCTCAAGCAACAGATTTGAAGGGACGGTTCCTGAATTCATTGGGAATCTCACGGGGCTTCGTTCGCTCAATATGTCCCATAACATTCTCACTGGTTTGATCCCCTCATCCTTGGGAAAATTAAAGTTGCTTGAATCAGTGGACCTTTCACAGAACAAACTCTCAGGGGAGATCCCTCGACAACTGACACAGATTTCATTCCTTGCAAAATTCAATGTCTCTCACAACAATCTCAGTGGTCCTATTCCTCGTGGAACCCAATTTGCTACATTTGACAGTACTTCATATGAAGGAAACCTGGGTTTGTGTGGAGATCCGTTGCCAAAGAAATGTGGCAATGAAGCTCCTCATCAATTGCCACCTTCAACAGAAGAAGAAAATGGTTCTGATTTTGGAATTGAATTGGATTGGAAATTTGTTCTGGCAGGATCTGTGAGTGGGTTGCTAGTTGGAGTGGTTCTTGCAGACGTCCTCGTCACGAGGAAGCGCGAGTATTTCCTTGAGATTGTGGGGATACTGATCAGACTAATGAAAAGGAAAAGTAAGAAGAGGACTCGGAGAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8

Protein Analysis

1039

Amino Acids

115.06

Weight (kDa)

6.48

Isoelectric Point (pI)

42.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 50 - 100 1.1e-06 Leucine rich repeat N-terminal domain
LRR_14 PF23598 109 - 242 1.4e-08 Leucine-rich repeat region
LRR_8 PF13855 310 - 369 1.4e-06 Leucine rich repeat
LRR_14 PF23598 325 - 413 3.5e-10 Leucine-rich repeat region
LRR_8 PF13855 375 - 417 8.5e-06 Leucine rich repeat
LRR_14 PF23598 376 - 588 6.9e-13 Leucine-rich repeat region
LRR_8 PF13855 430 - 489 4.6e-06 Leucine rich repeat
LRR_8 PF13855 676 - 732 5.6e-07 Leucine rich repeat
LRR_8 PF13855 697 - 756 3.5e-06 Leucine rich repeat
LRR_8 PF13855 850 - 905 7.2e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 3026
AatII GACGTC 1 cut(s) 3024
AccBSI CCGCTC 3 cut(s) 1470, 1815, 1989
AccII CGCG 1 cut(s) 3042
AciI CCGC 8 cut(s) 413, 1000, 1470, 1815, 1989, 2000, 2075, 2472
AclWI GGATC 8 cut(s) 1686, 1839, 1864, 2450, 2647, 2719, 2861, 2989
AcoI YGGCCR 1 cut(s) 1702
AcuI CTGAAG 6 cut(s) 380, 614, 1326, 1517, 1976, 2300
AcyI GRCGYC 1 cut(s) 3021
AfaI GTAC 4 cut(s) 577, 1889, 1961, 2833
AfiI CCNNNNNNNGG 3 cut(s) 154, 885, 1216
AflIII ACRYGT 1 cut(s) 1488
AgeI ACCGGT 1 cut(s) 578
AhlI ACTAGT 1 cut(s) 851
AjnI CCWGG 3 cut(s) 536, 1215, 2850
AjuI GAANNNNNNNTTGG 6 cut(s) 676, 708, 1180, 1212, 1324, 1356
Alw26I GTCTC 4 cut(s) 350, 1553, 2236, 2776
AlwI GGATC 8 cut(s) 1686, 1839, 1864, 2450, 2647, 2719, 2861, 2989
AlwNI CAGNNNCTG 3 cut(s) 260, 403, 2984
AoxI GGCC 4 cut(s) 1328, 1702, 1816, 2065
ApeKI GCWGC 9 cut(s) 127, 130, 257, 260, 273, 745, 1501, 1996, 2543
ArsI GACNNNNNNTTYG 2 cut(s) 227, 259
AsiGI ACCGGT 1 cut(s) 578
Asp700I GAANNNNTTC 2 cut(s) 651, 2417
AspLEI GCGC 1 cut(s) 3042
AspS9I GGNCC 4 cut(s) 1184, 1328, 2695, 2792
AsuHPI GGTGA 6 cut(s) 593, 1204, 1866, 1920, 2164, 2290
AsuII TTCGAA 3 cut(s) 65, 463, 2411
AvaII GGWCC 3 cut(s) 1184, 2695, 2792
BalI TGGCCA 1 cut(s) 1704
BarI GAAGNNNNNNTAC 2 cut(s) 2468, 2500
BauI CACGAG 4 cut(s) 277, 1436, 2802, 3031
BbsI GAAGAC 4 cut(s) 311, 1116, 1260, 2438
BbvI GCAGC 9 cut(s) 139, 142, 244, 247, 260, 732, 1488, 1983, 2530
BceAI ACGGC 1 cut(s) 118
BcgI CGANNNNNNTGC 2 cut(s) 188, 222
BciT130I CCWGG 3 cut(s) 538, 1217, 2852
BciVI GTATCC 1 cut(s) 3060
BclI TGATCA 1 cut(s) 3072
BcoDI GTCTC 4 cut(s) 350, 1553, 2236, 2776
BcuI ACTAGT 1 cut(s) 851
BfmI CTRYAG 2 cut(s) 125, 2126
BfuI GTATCC 1 cut(s) 3060
BglII AGATCT 3 cut(s) 817, 898, 1375
BmcAI AGTACT 2 cut(s) 1889, 2833
Bme1390I CCNGG 3 cut(s) 538, 1217, 2852
Bme18I GGWCC 3 cut(s) 1184, 2695, 2792
BmgT120I GGNCC 4 cut(s) 1184, 1328, 2695, 2792
BmiI GGNNCC 3 cut(s) 2270, 2583, 2809
BmrFI CCNGG 3 cut(s) 538, 1217, 2852
BmrI ACTGGG 2 cut(s) 755, 1335
BmsI GCATC 4 cut(s) 260, 944, 1175, 2154
BmuI ACTGGG 2 cut(s) 755, 1335
BpiI GAAGAC 4 cut(s) 311, 1116, 1260, 2438
BplI GAGNNNNNCTC 2 cut(s) 63, 95
BpmI CTGGAG 2 cut(s) 158, 1779
Bpu14I TTCGAA 3 cut(s) 65, 463, 2411
BpuEI CTTGAG 3 cut(s) 2189, 2542, 3074
BsaBI GATNNNNATC 2 cut(s) 1098, 3071
BsaHI GRCGYC 1 cut(s) 3021
BsaJI CCNNGG 6 cut(s) 696, 1215, 2141, 2272, 2664, 2851
BsaWI WCCGGW 1 cut(s) 578
Bsc4I CCNNNNNNNGG 3 cut(s) 154, 885, 1216
Bse118I RCCGGY 2 cut(s) 578, 835
Bse1I ACTGG 8 cut(s) 175, 604, 761, 1042, 1186, 1330, 1796, 2650
Bse3DI GCAATG 2 cut(s) 2259, 2896
Bse8I GATNNNNATC 2 cut(s) 1098, 3071
BseBI CCWGG 3 cut(s) 538, 1217, 2852
BseDI CCNNGG 6 cut(s) 696, 1215, 2141, 2272, 2664, 2851
BseGI GGATG 8 cut(s) 275, 1116, 1260, 1725, 1789, 1838, 1877, 2660
BseJI GATNNNNATC 2 cut(s) 1098, 3071
BseLI CCNNNNNNNGG 3 cut(s) 154, 885, 1216
BseMI GCAATG 2 cut(s) 2259, 2896
BseNI ACTGG 8 cut(s) 175, 604, 761, 1042, 1186, 1330, 1796, 2650
BseRI GAGGAG 4 cut(s) 170, 716, 1502, 2889
BseXI GCAGC 9 cut(s) 139, 142, 244, 247, 260, 732, 1488, 1983, 2530
BseYI CCCAGC 1 cut(s) 2233
BsgI GTGCAG 1 cut(s) 663
Bsh1236I CGCG 1 cut(s) 3042
BshFI GGCC 4 cut(s) 1330, 1704, 1818, 2067
BshTI ACCGGT 1 cut(s) 578
BsiSI CCGG 3 cut(s) 351, 579, 836
BslFI GGGAC 5 cut(s) 296, 532, 2239, 2590, 2614
BslI CCNNNNNNNGG 3 cut(s) 154, 885, 1216
BsmAI GTCTC 4 cut(s) 350, 1553, 2236, 2776
BsmFI GGGAC 5 cut(s) 296, 532, 2239, 2590, 2614
BsmI GAATGC 3 cut(s) 471, 1579, 1701
BsnI GGCC 4 cut(s) 1330, 1704, 1818, 2067
Bsp119I TTCGAA 3 cut(s) 65, 463, 2411
Bsp19I CCATGG 2 cut(s) 696, 2272
BspACI CCGC 8 cut(s) 413, 1000, 1470, 1815, 1989, 2000, 2075, 2472
BspANI GGCC 4 cut(s) 1330, 1704, 1818, 2067
BspFNI CGCG 1 cut(s) 3042
BspHI TCATGA 1 cut(s) 1752
BspLI GGNNCC 3 cut(s) 2270, 2583, 2809
BspMAI CTGCAG 2 cut(s) 129, 2130
BspPI GGATC 8 cut(s) 1686, 1839, 1864, 2450, 2647, 2719, 2861, 2989
BspT104I TTCGAA 3 cut(s) 65, 463, 2411
BsrBI CCGCTC 3 cut(s) 1470, 1815, 1989
BsrDI GCAATG 2 cut(s) 2259, 2896
BsrFI RCCGGY 2 cut(s) 578, 835
BsrI ACTGG 8 cut(s) 175, 604, 761, 1042, 1186, 1330, 1796, 2650
BssAI RCCGGY 2 cut(s) 578, 835
BssECI CCNNGG 6 cut(s) 696, 1215, 2141, 2272, 2664, 2851
BssNI GRCGYC 1 cut(s) 3021
BssSI CACGAG 4 cut(s) 277, 1436, 2802, 3031
BssT1I CCWWGG 4 cut(s) 696, 2141, 2272, 2664
Bst2BI CACGAG 4 cut(s) 277, 1436, 2802, 3031
Bst2UI CCWGG 3 cut(s) 538, 1217, 2852
Bst4CI ACNGT 7 cut(s) 575, 1077, 1400, 1521, 1750, 2581, 2831
Bst6I CTCTTC 6 cut(s) 86, 383, 499, 1345, 1551, 3095
BstACI GRCGYC 1 cut(s) 3021
BstBI TTCGAA 3 cut(s) 65, 463, 2411
BstC8I GCNNGC 6 cut(s) 59, 743, 837, 1164, 1994, 2079
BstDSI CCRYGG 2 cut(s) 696, 2272
BstENI CCTNNNNNAGG 1 cut(s) 1214
BstF5I GGATG 8 cut(s) 275, 1116, 1260, 1725, 1789, 1838, 1877, 2660
BstFNI CGCG 1 cut(s) 3042
BstHHI GCGC 1 cut(s) 3042
BstMAI GTCTC 4 cut(s) 350, 1553, 2236, 2776
BstMWI GCNNNNNNNGC 3 cut(s) 360, 1058, 2617
BstNI CCWGG 3 cut(s) 538, 1217, 2852
BstNSI RCATGY 3 cut(s) 61, 1492, 1996
BstSCI CCNGG 3 cut(s) 536, 1215, 2850
BstSFI CTRYAG 2 cut(s) 125, 2126
BstUI CGCG 1 cut(s) 3042
BstV1I GCAGC 9 cut(s) 139, 142, 244, 247, 260, 732, 1488, 1983, 2530
BstV2I GAAGAC 4 cut(s) 311, 1116, 1260, 2438
BstX2I RGATCY 8 cut(s) 817, 898, 1375, 1678, 1831, 2724, 2866, 2981
BstXI CCANNNNNNTGG 1 cut(s) 697
BstYI RGATCY 8 cut(s) 817, 898, 1375, 1678, 1831, 2724, 2866, 2981
BsuI GTATCC 1 cut(s) 3060
BsuRI GGCC 4 cut(s) 1330, 1704, 1818, 2067
BtgI CCRYGG 2 cut(s) 696, 2272
BtgZI GCGATG 1 cut(s) 1684
BtsCI GGATG 8 cut(s) 275, 1116, 1260, 1725, 1789, 1838, 1877, 2660
BtsI GCAGTG 1 cut(s) 2009
Cac8I GCNNGC 6 cut(s) 59, 743, 837, 1164, 1994, 2079
CaiI CAGNNNCTG 3 cut(s) 260, 403, 2984
CciI TCATGA 1 cut(s) 1752
CfoI GCGC 1 cut(s) 3042
Cfr10I RCCGGY 2 cut(s) 578, 835
Cfr13I GGNCC 4 cut(s) 1184, 1328, 2695, 2792
Csp6I GTAC 4 cut(s) 576, 1888, 1960, 2832
CspAI ACCGGT 1 cut(s) 578
CspCI CAANNNNNGTGG 2 cut(s) 2770, 2805
CviQI GTAC 4 cut(s) 576, 1888, 1960, 2832
DraI TTTAAA 2 cut(s) 774, 789
DrdI GACNNNNNNGTC 1 cut(s) 3026
DseDI GACNNNNNNGTC 1 cut(s) 3026
EaeI YGGCCR 1 cut(s) 1702
Eam1104I CTCTTC 6 cut(s) 86, 383, 499, 1345, 1551, 3095
EarI CTCTTC 6 cut(s) 86, 383, 499, 1345, 1551, 3095
Eco130I CCWWGG 4 cut(s) 696, 2141, 2272, 2664
Eco32I GATATC 1 cut(s) 1655
Eco47I GGWCC 3 cut(s) 1184, 2695, 2792
Eco57I CTGAAG 6 cut(s) 380, 614, 1326, 1517, 1976, 2300
EcoNI CCTNNNNNAGG 1 cut(s) 1214
EcoRI GAATTC 3 cut(s) 755, 2195, 2588
EcoRII CCWGG 3 cut(s) 536, 1215, 2850
EcoRV GATATC 1 cut(s) 1655
EcoT14I CCWWGG 4 cut(s) 696, 2141, 2272, 2664
EcoT22I ATGCAT 1 cut(s) 1701
ErhI CCWWGG 4 cut(s) 696, 2141, 2272, 2664
FalI AAGNNNNNCTT 2 cut(s) 173, 205
FaqI GGGAC 5 cut(s) 296, 532, 2239, 2590, 2614
FauI CCCGC 2 cut(s) 2082, 2465
FauNDI CATATG 1 cut(s) 2839
FbaI TGATCA 1 cut(s) 3072
FokI GGATG 8 cut(s) 282, 1103, 1247, 1732, 1776, 1825, 1864, 2647
GlaI GCGC 1 cut(s) 3041
GsaI CCCAGC 1 cut(s) 2237
GsuI CTGGAG 2 cut(s) 158, 1779
HaeIII GGCC 4 cut(s) 1330, 1704, 1818, 2067
HapII CCGG 3 cut(s) 351, 579, 836
HhaI GCGC 1 cut(s) 3042
Hin1I GRCGYC 1 cut(s) 3021
Hin6I GCGC 1 cut(s) 3040
HinP1I GCGC 1 cut(s) 3040
HindIII AAGCTT 3 cut(s) 187, 650, 920
HpaII CCGG 3 cut(s) 351, 579, 836
HphI GGTGA 6 cut(s) 593, 1204, 1866, 1920, 2164, 2290
Hpy166II GTNNAC 3 cut(s) 1919, 2421, 2695
Hpy8I GTNNAC 3 cut(s) 1919, 2421, 2695
Hpy99I CGWCG 1 cut(s) 203
HpyAV CCTTC 8 cut(s) 1881, 2057, 2324, 2469, 2494, 2567, 2837, 2925
HpyCH4III ACNGT 7 cut(s) 575, 1077, 1400, 1521, 1750, 2581, 2831
HpyCH4IV ACGT 1 cut(s) 3021
HpyF10VI GCNNNNNNNGC 3 cut(s) 360, 1058, 2617
HpySE526I ACGT 1 cut(s) 3021
Hsp92I GRCGYC 1 cut(s) 3021
HspAI GCGC 1 cut(s) 3040
KroI GCCGGC 1 cut(s) 835
KroNI GCCGGC 1 cut(s) 837
Ksp22I TGATCA 1 cut(s) 3072
LmnI GCTCC 5 cut(s) 177, 368, 668, 1812, 2902
Lsp1109I GCAGC 9 cut(s) 139, 142, 244, 247, 260, 732, 1488, 1983, 2530
LweI GCATC 4 cut(s) 260, 944, 1175, 2154
MaeII ACGT 1 cut(s) 3021
MaeIII GTNAC 9 cut(s) 569, 864, 1077, 1086, 1112, 1219, 1256, 1438, 3028
MbiI CCGCTC 3 cut(s) 1470, 1815, 1989
MfeI CAATTG 2 cut(s) 530, 2906
MflI RGATCY 8 cut(s) 817, 898, 1375, 1678, 1831, 2724, 2866, 2981
MlsI TGGCCA 1 cut(s) 1704
MluNI TGGCCA 1 cut(s) 1704
MlyI GAGTC 5 cut(s) 649, 1421, 2221, 2238, 3100
MmeI TCCRAC 3 cut(s) 390, 1866, 2983
Mox20I TGGCCA 1 cut(s) 1704
Mph1103I ATGCAT 1 cut(s) 1701
MroNI GCCGGC 1 cut(s) 835
MroXI GAANNNNTTC 2 cut(s) 651, 2417
MscI TGGCCA 1 cut(s) 1704
MseI TTAA 9 cut(s) 180, 480, 773, 788, 798, 1178, 1322, 1913, 2675
MslI CAYNNNNRTG 3 cut(s) 1107, 2262, 2426
Msp20I TGGCCA 1 cut(s) 1704
MspA1I CMGCKG 1 cut(s) 257
MspI CCGG 3 cut(s) 351, 579, 836
MspR9I CCNGG 3 cut(s) 538, 1217, 2852
MunI CAATTG 2 cut(s) 530, 2906
Mva1269I GAATGC 3 cut(s) 471, 1579, 1701
MvaI CCWGG 3 cut(s) 538, 1217, 2852
MvnI CGCG 1 cut(s) 3042
MwoI GCNNNNNNNGC 3 cut(s) 360, 1058, 2617
NaeI GCCGGC 1 cut(s) 837
NcoI CCATGG 2 cut(s) 696, 2272
NdeI CATATG 1 cut(s) 2839
NgoMIV GCCGGC 1 cut(s) 835
NlaIV GGNNCC 3 cut(s) 2270, 2583, 2809
NmuCI GTSAC 7 cut(s) 569, 864, 1077, 1086, 1219, 1438, 3028
NsiI ATGCAT 1 cut(s) 1701
NspI RCATGY 3 cut(s) 61, 1492, 1996
NspV TTCGAA 3 cut(s) 65, 463, 2411
PaeI GCATGC 2 cut(s) 61, 1996
PagI TCATGA 1 cut(s) 1752
PciI ACATGT 1 cut(s) 1488
PctI GAATGC 3 cut(s) 471, 1579, 1701
PdiI GCCGGC 1 cut(s) 837
PdmI GAANNNNTTC 2 cut(s) 651, 2417
PflFI GACNNNGTC 1 cut(s) 287
PinAI ACCGGT 1 cut(s) 578
PleI GAGTC 5 cut(s) 648, 1420, 2221, 2238, 3100
PpsI GAGTC 5 cut(s) 648, 1420, 2221, 2238, 3100
PscI ACATGT 1 cut(s) 1488
Psp6I CCWGG 3 cut(s) 536, 1215, 2850
PspFI CCCAGC 1 cut(s) 2233
PspGI CCWGG 3 cut(s) 536, 1215, 2850
PspN4I GGNNCC 3 cut(s) 2270, 2583, 2809
PspPI GGNCC 4 cut(s) 1184, 1328, 2695, 2792
PstI CTGCAG 2 cut(s) 129, 2130
PstNI CAGNNNCTG 3 cut(s) 260, 403, 2984
PsuI RGATCY 8 cut(s) 817, 898, 1375, 1678, 1831, 2724, 2866, 2981
PsyI GACNNNGTC 1 cut(s) 287
PvuII CAGCTG 1 cut(s) 257
RsaI GTAC 4 cut(s) 577, 1889, 1961, 2833
RsaNI GTAC 4 cut(s) 576, 1888, 1960, 2832
RseI CAYNNNNRTG 3 cut(s) 1107, 2262, 2426
SaqAI TTAA 9 cut(s) 180, 480, 773, 788, 798, 1178, 1322, 1913, 2675
Sau96I GGNCC 4 cut(s) 1184, 1328, 2695, 2792
ScaI AGTACT 2 cut(s) 1889, 2833
SchI GAGTC 5 cut(s) 649, 1421, 2221, 2238, 3100
ScrFI CCNGG 3 cut(s) 538, 1217, 2852
SfaNI GCATC 4 cut(s) 260, 944, 1175, 2154
SfcI CTRYAG 2 cut(s) 125, 2126
SfuI TTCGAA 3 cut(s) 65, 463, 2411
SinI GGWCC 3 cut(s) 1184, 2695, 2792
SmiMI CAYNNNNRTG 3 cut(s) 1107, 2262, 2426
SmlI CTYRAG 3 cut(s) 2168, 2557, 3053
SmoI CTYRAG 3 cut(s) 2168, 2557, 3053
SpeI ACTAGT 1 cut(s) 851
SphI GCATGC 2 cut(s) 61, 1996
SsiI CCGC 8 cut(s) 413, 1000, 1470, 1815, 1989, 2000, 2075, 2472
StyD4I CCNGG 3 cut(s) 536, 1215, 2850
StyI CCWWGG 4 cut(s) 696, 2141, 2272, 2664
TaaI ACNGT 7 cut(s) 575, 1077, 1400, 1521, 1750, 2581, 2831
TaiI ACGT 1 cut(s) 3024
TatI WGTACW 2 cut(s) 1887, 2831
TauI GCSGC 5 cut(s) 1003, 1473, 1818, 1992, 2002
Tru1I TTAA 9 cut(s) 180, 480, 773, 788, 798, 1178, 1322, 1913, 2675
Tru9I TTAA 9 cut(s) 180, 480, 773, 788, 798, 1178, 1322, 1913, 2675
TseFI GTSAC 7 cut(s) 569, 864, 1077, 1086, 1219, 1438, 3028
TseI GCWGC 9 cut(s) 127, 130, 257, 260, 273, 745, 1501, 1996, 2543
Tsp45I GTSAC 7 cut(s) 569, 864, 1077, 1086, 1219, 1438, 3028
TspGWI ACGGA 2 cut(s) 371, 2859
Tth111I GACNNNGTC 1 cut(s) 287
VpaK11BI GGWCC 3 cut(s) 1184, 2695, 2792
XagI CCTNNNNNAGG 1 cut(s) 1214
XbaI TCTAGA 3 cut(s) 643, 1450, 2302
XceI RCATGY 3 cut(s) 61, 1492, 1996
XmnI GAANNNNTTC 2 cut(s) 651, 2417
ZraI GACGTC 1 cut(s) 3022
ZrmI AGTACT 2 cut(s) 1889, 2833
Zsp2I ATGCAT 1 cut(s) 1701
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.