FvH4_2g05950

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000024
Physical Location & Seq
Forward (+)
4938687 .. 4941776
3090 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g05950.t1

Sequence Viewer

Length: 3090 bp
ATGGGGCTATCACTGAGCTTGTGGGATGGTCGCATGCTTTCGGCACCAGTAATTCTCTTTGTGTTTCATTTCTTTGTTTTTGCCAACTCTCTAAACTCTCTGCAGCAGCCATCATCTTTCTGCCATGACGATGAGAGCTTGGCATTGCTCCAGTTTAAGCAAAGCTTTGTAATCGACGAATTTGCTTCTGTTGGTGAGGGTGCTTATCCAAGGGTTTTGTCATGGAAACCAGCTGCTGCTAAAGAATGCTGCTCATGGGACGGGGTCGAGTGCGATGAGAAGACAGGTCATGTCATTAGCCTTGATCTTAGTAGCAGTTACCTCTCCGGTTCTATCGATTCCAACAGCACCCTCTTCCACCTTGTTCATCTTCAGAGGCTGAACCTTGCCGACAATGACTTCAATCAATCTCAAATTCCTATTACCATCAGGAATCTTCCGGTGCTTCATTATCTTAACCTCTCTGGCTCATTCTTTTCTGGTCAAATCCCATCTGAAATTTCTCAGTTGTCCAAGTTGTCGTCCCTGGACCTATCCTCCAATACTGATAGTACTGGTGAAAGATCCCTGATGCTAAACCAGTCCAATCTAAAAAGGCTGGTTCAGAACTTAACCAGTCTAGAAAAGCTTCATCTCAGCTCCGTCCTCATTTCTGCACCAGTACCCGATTCTGTGGCAAATTTACCATTTCTGACATCTCTCCTCCTAGAGTATTGTGATCTGCGAGGCCATTTCCCGGTAAGTATTTTAAAACTACAAAGTTTAAAGTTTCTTAATGTAGAATCCAATCCAGATCTCTTTGGTTTTTTGCCGGCATTTGAACAAACTAGTCCTCTAATGTCACTCAGAGTTTCCAGAACAAGGTTTTCAGGAAGCCTTCCCTTTTCAATTAAAAAGCTTGATTCACTGAACGAATTAGTTGCCAGTCGATGCAATTTTTCAGGTCTGCTTCCATCTTCACTCGGAAATCTTAGGCAGCTGGTTTATTTAGACCTTTCAAATAACACACTTAGTGGCTCCATCCCTGCTTCTTTGGCTACCCTTAGCCAACTGTCACATCTGTCCCTTGATAATAATCATTTCAGCGGTTACATCCCATCTTCTCTTGGTAATCTCATCCAGCTTACAACACTTTCGCTTGCAACAAATCAACTTACCGGTCCAATCCCATCTTCTCTAGGAAAACTTATCCAGCTCACTGAGTTAGACCTCTCTGGTAATGATTTTGGTGGTTACATCCCATCTTCCATCGGAAATCTCAACCAGCTCGTAAGACTTTCGCTTTCTTCGAATCAATTAACAGGGCCAATCCCATCTTCTGTAGGAAATCTTAGCAATCTAATTGAGTTGGATTTTTTCTCAAACCATTTGCACAGTTCCGTTCCTGAGTCCTTATTCAATCTCACAAATCTCGTGACGCTTTATCTAGATAGTAATAGACTGAGCGGCAAAGTGAATTTCTCCATGTTTCAAAAGCTGCAAAATCTCCTCATACTGTATCTCTCTGGAAATAAATTGGAATTGTTGCTCGAAGAGACAAGACATACGAATGCAACAACTTTTCCAAATTTTATAACTCTAGGATTGGGTTCTTGCAACATAACCGAGTTCCCAAGTTTCCTAAGATATCAAAAAAATTTGCGATGGCTGGATCTTGCTGAGAATGGAATGCATGGCCAAGTACCGAGATGGATGTGGAATGTAAGCATAGAAAGTTTGACGGTTATGAACATTTCTCATAACTTCCTTTCTGGCTTTGACCAACCTCCAGATATTCTTTTGTGGAGTGGCTTACAGCTCTTGGATCTTTCGTCCAACCTGATTCAGGGATCGCTACTGATACCTTCACCATCAATCGAGTACTATGTAGTTTCAGACAACAAGCTAAGTGGGCAAGTTTTACCTCTGATTTGCAATCTGACTTCTCTGAAGTACCTTGATTTGTCAAACAACAACTTGAGTGGGATGCTGCCACAGTGTCTTGGGAAGTTCAGTAAAAATCTGCGAGTTTTACATCTTGGAAACAACTCTTTTGAAGGCCACCTCCCGGAAGCATACACAAGCAGTCTAATCATGATTGATGTTGGTAACAATAAGCTGCAGGGAATCTTGCCCAGGTCATTGGCAAATTGTTTGATGCTTGAGTTTCTTGTTATATCTAACAATGAGTTCAGTGATGTTTTCCCTTTTTGGTTGGGAACTCTCCCAGGGTTGAGACTCTTGGCAATGCACCATAATGGATTCCATGGGGTGATAAGGAAACCTGAAAAGAATCCAGACTATTTTCTTCAGTTGCACATTCTTGATCTATCTTTCAATAATTTCTCAGGCAACTTCCCCTTTGAATACATTTTCTCTGGAAATGCAATCAAAGGTATCACTTCCGATCAGTTCACATACCTGAAGACAACCGCAGATGTTGTTTATGATCCTTCATATCATGGCGGGTATTTCTCCTTCACAATGACAAGTAAAGGTGTGAACAGATTCTATCCCAAGATTCGAGAGGACTTTGCAGTCATTGACATCTCAAGCAACAATTTTGAAGCTGAGATTCCTGAGTTTATTGGGGACCTAACGGGGCTTCGTTTGCTAAATATGTCGAACAACATTCTCACTGGTTTGATCCCCTCATCCTTGGGAAAATTAAAGTTGCTTGAATCGTTGGACCTTTCACAGAACAAACTCTCAGGGGAGATCCCTCGTCAACTGGCACAGATTTCATTTCTTGCGAAATTCAATGTCTCTCACAACAATCTCAGTGGTCTTATTCCTCGTGGTTCCCAGTTTGCTACCTTTGACAGTACTTCATATGAAGGAAACCTGGGGTTGTGTGGAGATCCATTGCCAAAGAAATGCGGCAATGATGCTCCTCCGTTGCCACCTCCTACAGAAGAAGATGATGATTCTGATTCTGGAATTGAATTGGATTGGAAATTTGTACTAGCAGGATCTGTGAGTGGCATGCTAGTTGGAGTGGTTCTTGCAGATGTCCTCCTCACAAGGAGGCGTGAGTATTTTCTTGAGATTGTTGGGATACTAATCAGACTAACGAAAAGGAAAAGAAAGAATAGGGCTTGGAAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8

Protein Analysis

1030

Amino Acids

113.86

Weight (kDa)

5.72

Isoelectric Point (pI)

44.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 42 - 92 3.8e-07 Leucine rich repeat N-terminal domain
LRR_14 PF23598 102 - 234 2.2e-08 Leucine-rich repeat region
LRR_14 PF23598 282 - 379 1.2e-07 Leucine-rich repeat region
LRR_8 PF13855 302 - 361 1.1e-06 Leucine rich repeat
LRR_8 PF13855 350 - 409 2.4e-06 Leucine rich repeat
LRR_14 PF23598 367 - 579 2.2e-14 Leucine-rich repeat region
LRR_8 PF13855 422 - 481 2.4e-06 Leucine rich repeat
LRR_8 PF13855 840 - 896 2.5e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1574
AasI GACNNNNNNGTC 1 cut(s) 2516
AccB1I GGYRCC 1 cut(s) 43
AccBSI CCGCTC 1 cut(s) 1446
AciI CCGC 5 cut(s) 1086, 1446, 2412, 2445, 2859
AclWI GGATC 9 cut(s) 558, 1659, 1812, 1837, 2423, 2620, 2692, 2834, 2959
AcoI YGGCCR 1 cut(s) 1675
AcsI RAATTY 9 cut(s) 179, 414, 498, 679, 1456, 1567, 1636, 2735, 2936
AcuI CTGAAG 4 cut(s) 356, 1949, 2273, 2423
AdeI CACNNNGTG 1 cut(s) 1013
AfaI GTAC 7 cut(s) 553, 663, 1683, 1862, 1934, 2806, 2943
AfiI CCNNNNNNNGG 4 cut(s) 736, 861, 1825, 2047
AgeI ACCGGT 1 cut(s) 1157
AhlI ACTAGT 1 cut(s) 827
AjnI CCWGG 4 cut(s) 525, 2114, 2206, 2823
AjuI GAANNNNNNNTTGG 4 cut(s) 1156, 1188, 1300, 1332
Alw26I GTCTC 3 cut(s) 1529, 2209, 2749
AlwI GGATC 9 cut(s) 558, 1659, 1812, 1837, 2423, 2620, 2692, 2834, 2959
AlwNI CAGNNNCTG 3 cut(s) 236, 379, 2954
AoxI GGCC 4 cut(s) 727, 1304, 1675, 2038
ApeKI GCWGC 9 cut(s) 103, 106, 233, 236, 249, 976, 1477, 1969, 2098
ApoI RAATTY 9 cut(s) 179, 414, 498, 679, 1456, 1567, 1636, 2735, 2936
AsiGI ACCGGT 1 cut(s) 1157
Asp700I GAANNNNTTC 2 cut(s) 627, 2486
AspS9I GGNCC 5 cut(s) 529, 1160, 1304, 2572, 2668
AsuC2I CCSGG 2 cut(s) 737, 2048
AsuHPI GGTGA 4 cut(s) 206, 569, 1839, 2263
AsuII TTCGAA 1 cut(s) 1289
AvaII GGWCC 4 cut(s) 529, 1160, 2572, 2668
BalI TGGCCA 1 cut(s) 1677
BanI GGYRCC 1 cut(s) 43
BarI GAAGNNNNNNTAC 2 cut(s) 2441, 2473
BauI CACGAG 2 cut(s) 1412, 2775
BbsI GAAGAC 2 cut(s) 287, 2411
BbvI GCAGC 9 cut(s) 115, 118, 220, 223, 236, 988, 1464, 1956, 2085
BcgI CGANNNNNNTGC 4 cut(s) 164, 198, 902, 936
BciT130I CCWGG 4 cut(s) 527, 2116, 2208, 2825
BciVI GTATCC 1 cut(s) 3030
BcnI CCSGG 2 cut(s) 737, 2048
BcoDI GTCTC 3 cut(s) 1529, 2209, 2749
BcuI ACTAGT 1 cut(s) 827
BfaI CTAG 8 cut(s) 620, 707, 828, 1178, 1427, 1580, 2945, 2969
BfmI CTRYAG 4 cut(s) 101, 1320, 2099, 2889
BfuI GTATCC 1 cut(s) 3030
BglII AGATCT 1 cut(s) 793
BmcAI AGTACT 3 cut(s) 553, 1862, 2806
Bme1390I CCNGG 6 cut(s) 527, 737, 2048, 2116, 2208, 2825
Bme18I GGWCC 4 cut(s) 529, 1160, 2572, 2668
BmgT120I GGNCC 5 cut(s) 529, 1160, 1304, 2572, 2668
BmiI GGNNCC 4 cut(s) 45, 1018, 2573, 2782
BmrFI CCNGG 6 cut(s) 527, 737, 2048, 2116, 2208, 2825
BmrI ACTGGG 1 cut(s) 2779
BmsI GCATC 5 cut(s) 561, 920, 1956, 2127, 2857
BmuI ACTGGG 1 cut(s) 2779
BpiI GAAGAC 2 cut(s) 287, 2411
BpmI CTGGAG 2 cut(s) 134, 1752
Bpu10I CCTNAGC 1 cut(s) 1043
Bpu14I TTCGAA 1 cut(s) 1289
BpuEI CTTGAG 4 cut(s) 1978, 2162, 2515, 3044
BpuMI CCSGG 2 cut(s) 737, 2048
Bsa29I ATCGAT 1 cut(s) 336
BsaBI GATNNNNATC 2 cut(s) 1074, 3041
BsaJI CCNNGG 8 cut(s) 209, 525, 2114, 2206, 2207, 2245, 2637, 2824
BsaWI WCCGGW 3 cut(s) 326, 439, 1157
BsaXI ACNNNNNCTCC 2 cut(s) 521, 551
Bsc4I CCNNNNNNNGG 4 cut(s) 736, 861, 1825, 2047
Bse118I RCCGGY 2 cut(s) 811, 1157
Bse3DI GCAATG 4 cut(s) 143, 2232, 2843, 2869
Bse8I GATNNNNATC 2 cut(s) 1074, 3041
BseBI CCWGG 4 cut(s) 527, 2116, 2208, 2825
BseCI ATCGAT 1 cut(s) 336
BseDI CCNNGG 8 cut(s) 209, 525, 2114, 2206, 2207, 2245, 2637, 2824
BseGI GGATG 8 cut(s) 31, 1020, 1092, 1116, 1236, 1698, 1971, 2633
BseJI GATNNNNATC 2 cut(s) 1074, 3041
BseLI CCNNNNNNNGG 4 cut(s) 736, 861, 1825, 2047
BseMI GCAATG 4 cut(s) 143, 2232, 2843, 2869
BseRI GAGGAG 4 cut(s) 692, 1478, 2862, 2987
BseXI GCAGC 9 cut(s) 115, 118, 220, 223, 236, 988, 1464, 1956, 2085
BsgI GTGCAG 1 cut(s) 639
BshFI GGCC 4 cut(s) 729, 1306, 1677, 2040
BshNI GGYRCC 1 cut(s) 43
BshTI ACCGGT 1 cut(s) 1157
BshVI ATCGAT 1 cut(s) 336
BsiSI CCGG 6 cut(s) 327, 440, 737, 812, 1158, 2048
BslFI GGGAC 4 cut(s) 272, 508, 1048, 2585
BslI CCNNNNNNNGG 4 cut(s) 736, 861, 1825, 2047
BsmAI GTCTC 3 cut(s) 1529, 2209, 2749
BsmFI GGGAC 4 cut(s) 272, 508, 1048, 2585
BsmI GAATGC 3 cut(s) 251, 1555, 1674
BsnI GGCC 4 cut(s) 729, 1306, 1677, 2040
Bsp119I TTCGAA 1 cut(s) 1289
Bsp19I CCATGG 1 cut(s) 2245
BspACI CCGC 5 cut(s) 1086, 1446, 2412, 2445, 2859
BspANI GGCC 4 cut(s) 729, 1306, 1677, 2040
BspDI ATCGAT 1 cut(s) 336
BspHI TCATGA 1 cut(s) 2073
BspLI GGNNCC 4 cut(s) 45, 1018, 2573, 2782
BspMAI CTGCAG 2 cut(s) 105, 2103
BspPI GGATC 9 cut(s) 558, 1659, 1812, 1837, 2423, 2620, 2692, 2834, 2959
BspT104I TTCGAA 1 cut(s) 1289
BspT107I GGYRCC 1 cut(s) 43
BsrBI CCGCTC 1 cut(s) 1446
BsrDI GCAATG 4 cut(s) 143, 2232, 2843, 2869
BsrFI RCCGGY 2 cut(s) 811, 1157
BssAI RCCGGY 2 cut(s) 811, 1157
BssECI CCNNGG 8 cut(s) 209, 525, 2114, 2206, 2207, 2245, 2637, 2824
BssSI CACGAG 2 cut(s) 1412, 2775
BssT1I CCWWGG 3 cut(s) 209, 2245, 2637
Bst2BI CACGAG 2 cut(s) 1412, 2775
Bst2UI CCWGG 4 cut(s) 527, 2116, 2208, 2825
Bst4CI ACNGT 6 cut(s) 1053, 1376, 1497, 1723, 1977, 2804
Bst6I CTCTTC 2 cut(s) 359, 1527
BstBI TTCGAA 1 cut(s) 1289
BstC8I GCNNGC 4 cut(s) 35, 813, 1140, 2966
BstDSI CCRYGG 1 cut(s) 2245
BstENI CCTNNNNNAGG 1 cut(s) 1823
BstF5I GGATG 8 cut(s) 31, 1020, 1092, 1116, 1236, 1698, 1971, 2633
BstMAI GTCTC 3 cut(s) 1529, 2209, 2749
BstMWI GCNNNNNNNGC 3 cut(s) 1034, 1891, 2590
BstNI CCWGG 4 cut(s) 527, 2116, 2208, 2825
BstNSI RCATGY 2 cut(s) 37, 2968
BstSCI CCNGG 6 cut(s) 525, 735, 2046, 2114, 2206, 2823
BstSFI CTRYAG 4 cut(s) 101, 1320, 2099, 2889
BstV1I GCAGC 9 cut(s) 115, 118, 220, 223, 236, 988, 1464, 1956, 2085
BstV2I GAAGAC 2 cut(s) 287, 2411
BstX2I RGATCY 7 cut(s) 563, 793, 1651, 1804, 2697, 2839, 2951
BstXI CCANNNNNNTGG 1 cut(s) 2122
BstYI RGATCY 7 cut(s) 563, 793, 1651, 1804, 2697, 2839, 2951
Bsu15I ATCGAT 1 cut(s) 336
BsuI GTATCC 1 cut(s) 3030
BsuRI GGCC 4 cut(s) 729, 1306, 1677, 2040
BsuTUI ATCGAT 1 cut(s) 336
BtgI CCRYGG 1 cut(s) 2245
BtgZI GCGATG 2 cut(s) 288, 1657
BtsCI GGATG 8 cut(s) 31, 1020, 1092, 1116, 1236, 1698, 1971, 2633
BtsIMutI CAGTG 7 cut(s) 11, 905, 1197, 1982, 2179, 2616, 2767
Cac8I GCNNGC 4 cut(s) 35, 813, 1140, 2966
CaiI CAGNNNCTG 3 cut(s) 236, 379, 2954
CciI TCATGA 1 cut(s) 2073
Cfr10I RCCGGY 2 cut(s) 811, 1157
Cfr13I GGNCC 5 cut(s) 529, 1160, 1304, 2572, 2668
ClaI ATCGAT 1 cut(s) 336
CseI GACGC 1 cut(s) 1426
Csp6I GTAC 7 cut(s) 552, 662, 1682, 1861, 1933, 2805, 2942
CspAI ACCGGT 1 cut(s) 1157
CspCI CAANNNNNGTGG 6 cut(s) 1870, 1905, 1942, 1977, 2743, 2778
CviQI GTAC 7 cut(s) 552, 662, 1682, 1861, 1933, 2805, 2942
DraI TTTAAA 2 cut(s) 750, 765
DraIII CACNNNGTG 1 cut(s) 1013
DrdI GACNNNNNNGTC 1 cut(s) 2516
DseDI GACNNNNNNGTC 1 cut(s) 2516
EaeI YGGCCR 1 cut(s) 1675
Eam1104I CTCTTC 2 cut(s) 359, 1527
EarI CTCTTC 2 cut(s) 359, 1527
Eco130I CCWWGG 3 cut(s) 209, 2245, 2637
Eco32I GATATC 1 cut(s) 1628
Eco47I GGWCC 4 cut(s) 529, 1160, 2572, 2668
Eco57I CTGAAG 4 cut(s) 356, 1949, 2273, 2423
EcoNI CCTNNNNNAGG 1 cut(s) 1823
EcoO109I RGGNCCY 1 cut(s) 2572
EcoRII CCWGG 4 cut(s) 525, 2114, 2206, 2823
EcoRV GATATC 1 cut(s) 1628
EcoT14I CCWWGG 3 cut(s) 209, 2245, 2637
EcoT22I ATGCAT 1 cut(s) 1674
ErhI CCWWGG 3 cut(s) 209, 2245, 2637
FalI AAGNNNNNCTT 2 cut(s) 149, 181
FaqI GGGAC 4 cut(s) 272, 508, 1048, 2585
FauI CCCGC 1 cut(s) 2438
FauNDI CATATG 1 cut(s) 2812
FokI GGATG 8 cut(s) 38, 1007, 1079, 1103, 1223, 1705, 1978, 2620
FspBI CTAG 8 cut(s) 620, 707, 828, 1178, 1427, 1580, 2945, 2969
GsuI CTGGAG 2 cut(s) 134, 1752
HaeIII GGCC 4 cut(s) 729, 1306, 1677, 2040
HapII CCGG 6 cut(s) 327, 440, 737, 812, 1158, 2048
HgaI GACGC 1 cut(s) 1426
HincII GTYRAC 1 cut(s) 2708
HindII GTYRAC 1 cut(s) 2708
HindIII AAGCTT 3 cut(s) 163, 626, 896
HpaII CCGG 6 cut(s) 327, 440, 737, 812, 1158, 2048
HphI GGTGA 4 cut(s) 206, 569, 1839, 2263
Hpy166II GTNNAC 3 cut(s) 2394, 2482, 2708
Hpy8I GTNNAC 3 cut(s) 2394, 2482, 2708
Hpy99I CGWCG 1 cut(s) 179
HpyAV CCTTC 6 cut(s) 887, 1854, 2030, 2442, 2467, 2810
HpyCH4III ACNGT 6 cut(s) 1053, 1376, 1497, 1723, 1977, 2804
HpyF10VI GCNNNNNNNGC 3 cut(s) 1034, 1891, 2590
KroI GCCGGC 1 cut(s) 811
KroNI GCCGGC 1 cut(s) 813
LmnI GCTCC 4 cut(s) 153, 644, 1022, 2875
Lsp1109I GCAGC 9 cut(s) 115, 118, 220, 223, 236, 988, 1464, 1956, 2085
LweI GCATC 5 cut(s) 561, 920, 1956, 2127, 2857
MaeI CTAG 8 cut(s) 620, 707, 828, 1178, 1427, 1580, 2945, 2969
MaeIII GTNAC 7 cut(s) 317, 840, 1053, 1088, 1232, 1414, 2087
MbiI CCGCTC 1 cut(s) 1446
MflI RGATCY 7 cut(s) 563, 793, 1651, 1804, 2697, 2839, 2951
MlsI TGGCCA 1 cut(s) 1677
MluNI TGGCCA 1 cut(s) 1677
MlyI GAGTC 2 cut(s) 1397, 2211
MmeI TCCRAC 5 cut(s) 366, 1329, 1839, 2646, 2953
Mox20I TGGCCA 1 cut(s) 1677
Mph1103I ATGCAT 1 cut(s) 1674
MroNI GCCGGC 1 cut(s) 811
MroXI GAANNNNTTC 2 cut(s) 627, 2486
MscI TGGCCA 1 cut(s) 1677
MseI TTAA 9 cut(s) 156, 456, 611, 749, 764, 774, 891, 1298, 2648
MslI CAYNNNNRTG 3 cut(s) 129, 1548, 2235
Msp20I TGGCCA 1 cut(s) 1677
MspA1I CMGCKG 3 cut(s) 233, 979, 1086
MspI CCGG 6 cut(s) 327, 440, 737, 812, 1158, 2048
MspR9I CCNGG 6 cut(s) 527, 737, 2048, 2116, 2208, 2825
Mva1269I GAATGC 3 cut(s) 251, 1555, 1674
MvaI CCWGG 4 cut(s) 527, 2116, 2208, 2825
MwoI GCNNNNNNNGC 3 cut(s) 1034, 1891, 2590
NaeI GCCGGC 1 cut(s) 813
NciI CCSGG 2 cut(s) 737, 2048
NcoI CCATGG 1 cut(s) 2245
NdeI CATATG 1 cut(s) 2812
NgoMIV GCCGGC 1 cut(s) 811
NlaIV GGNNCC 4 cut(s) 45, 1018, 2573, 2782
NmuCI GTSAC 3 cut(s) 840, 1053, 1414
NsiI ATGCAT 1 cut(s) 1674
NspI RCATGY 2 cut(s) 37, 2968
NspV TTCGAA 1 cut(s) 1289
PaeI GCATGC 2 cut(s) 37, 2968
PagI TCATGA 1 cut(s) 2073
PasI CCCWGGG 1 cut(s) 2207
PcsI WCGNNNNNNNCGW 1 cut(s) 1286
PctI GAATGC 3 cut(s) 251, 1555, 1674
PdiI GCCGGC 1 cut(s) 813
PdmI GAANNNNTTC 2 cut(s) 627, 2486
PflFI GACNNNGTC 1 cut(s) 263
PfoI TCCNGGA 1 cut(s) 2046
PinAI ACCGGT 1 cut(s) 1157
PleI GAGTC 2 cut(s) 1396, 2211
PpsI GAGTC 2 cut(s) 1396, 2211
PpuMI RGGWCCY 1 cut(s) 2572
PsiI TTATAA 1 cut(s) 1574
Psp5II RGGWCCY 1 cut(s) 2572
Psp6I CCWGG 4 cut(s) 525, 2114, 2206, 2823
PspGI CCWGG 4 cut(s) 525, 2114, 2206, 2823
PspN4I GGNNCC 4 cut(s) 45, 1018, 2573, 2782
PspPI GGNCC 5 cut(s) 529, 1160, 1304, 2572, 2668
PspPPI RGGWCCY 1 cut(s) 2572
PstI CTGCAG 2 cut(s) 105, 2103
PstNI CAGNNNCTG 3 cut(s) 236, 379, 2954
PsuI RGATCY 7 cut(s) 563, 793, 1651, 1804, 2697, 2839, 2951
PsyI GACNNNGTC 1 cut(s) 263
PvuII CAGCTG 2 cut(s) 233, 979
RsaI GTAC 7 cut(s) 553, 663, 1683, 1862, 1934, 2806, 2943
RsaNI GTAC 7 cut(s) 552, 662, 1682, 1861, 1933, 2805, 2942
RseI CAYNNNNRTG 3 cut(s) 129, 1548, 2235
SaqAI TTAA 9 cut(s) 156, 456, 611, 749, 764, 774, 891, 1298, 2648
Sau96I GGNCC 5 cut(s) 529, 1160, 1304, 2572, 2668
ScaI AGTACT 3 cut(s) 553, 1862, 2806
SchI GAGTC 2 cut(s) 1397, 2211
ScrFI CCNGG 6 cut(s) 527, 737, 2048, 2116, 2208, 2825
SfaNI GCATC 5 cut(s) 561, 920, 1956, 2127, 2857
SfcI CTRYAG 4 cut(s) 101, 1320, 2099, 2889
SfuI TTCGAA 1 cut(s) 1289
SinI GGWCC 4 cut(s) 529, 1160, 2572, 2668
SmiMI CAYNNNNRTG 3 cut(s) 129, 1548, 2235
SmlI CTYRAG 4 cut(s) 1957, 2141, 2530, 3023
SmoI CTYRAG 4 cut(s) 1957, 2141, 2530, 3023
SpeI ACTAGT 1 cut(s) 827
SphI GCATGC 2 cut(s) 37, 2968
SsiI CCGC 5 cut(s) 1086, 1446, 2412, 2445, 2859
SspMI CTAG 8 cut(s) 620, 707, 828, 1178, 1427, 1580, 2945, 2969
StyD4I CCNGG 6 cut(s) 525, 735, 2046, 2114, 2206, 2823
StyI CCWWGG 3 cut(s) 209, 2245, 2637
TaaI ACNGT 6 cut(s) 1053, 1376, 1497, 1723, 1977, 2804
TaqI TCGA 9 cut(s) 174, 267, 336, 928, 1289, 1530, 1857, 2503, 2603
TatI WGTACW 4 cut(s) 551, 1860, 2804, 2941
TauI GCSGC 2 cut(s) 1449, 2862
Tru1I TTAA 9 cut(s) 156, 456, 611, 749, 764, 774, 891, 1298, 2648
Tru9I TTAA 9 cut(s) 156, 456, 611, 749, 764, 774, 891, 1298, 2648
TscAI CASTG 7 cut(s) 18, 912, 1204, 1982, 2179, 2623, 2767
TseFI GTSAC 3 cut(s) 840, 1053, 1414
TseI GCWGC 9 cut(s) 103, 106, 233, 236, 249, 976, 1477, 1969, 2098
Tsp45I GTSAC 3 cut(s) 840, 1053, 1414
TspDTI ATGAA 9 cut(s) 56, 356, 437, 620, 1742, 2424, 2712, 2799, 2829
TspGWI ACGGA 3 cut(s) 631, 1369, 2865
TspRI CASTG 7 cut(s) 18, 912, 1204, 1982, 2179, 2623, 2767
Tth111I GACNNNGTC 1 cut(s) 263
VpaK11BI GGWCC 4 cut(s) 529, 1160, 2572, 2668
XagI CCTNNNNNAGG 1 cut(s) 1823
XapI RAATTY 9 cut(s) 179, 414, 498, 679, 1456, 1567, 1636, 2735, 2936
XbaI TCTAGA 2 cut(s) 619, 1426
XceI RCATGY 2 cut(s) 37, 2968
XmnI GAANNNNTTC 2 cut(s) 627, 2486
XspI CTAG 8 cut(s) 620, 707, 828, 1178, 1427, 1580, 2945, 2969
ZrmI AGTACT 3 cut(s) 553, 1862, 2806
Zsp2I ATGCAT 1 cut(s) 1674
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.