Prupe.3G196000_v2.0.a1

receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000024
Physical Location & Seq
Forward (+)
20692840 .. 20696373
3534 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G196000.1

Sequence Viewer

Length: 2970 bp
ATGGGAATGGAATCGTGGTGGTCGAAGTTTATTTCTGTATGTAGTTTTATTTTGCTATTACTCAATGCCACTCACTGTTTTTCACCTGCACAGAATGAGGCACTTGGCCAGGTTGATGAGTGCTCAGCCTTGCTGCAGTTCAAGGAAAGCTTTGCAATTAACAAGTCTGTTTCTGCAGATCCTCTTGCTTATCCGAAGGTTTCATTTTGGACGCGAGAAGGAGATGGGAATCGGAGTAATTGTTGTTCATGGGATGGTGTTGAGTGTGATGAAGACTTTGGCCATGTTGTCGGCCTTGATCTCCGTAGCAGCTGTCTCTACGGTTCTATCAATTCCAGCAACACTCTCTTCCGCCTTGTTCACTTGCAGTGGCTTGACCTCTCAGATAATCACTTCAATTTCTCTCAAATACCATCAAGGTTCGGTGATGATCTTTCGAATCTAACATATCTCAACCTTTCAAATTCCTTGTTTTCCGGAGAAATTCCACCAGAAATTTCAAAGTTATCGAAGCTGTCTACCCTTGATCTGTCTTTCAATTATCACAAAGTTAAAGTTTATGATGATAGTTTCCCTTTGAAACTGACCAATGCCAACATGAGAAGCCTGGTTCAGAACTTGACCGCCATAAAACAACTTCATCTTAATTGGGTAGAGATGTACTCCACTGTGCCTGATATCTTGGTCAATGCATCTTCTCTCACATCTCTCCAACTTGGCGTTTGTGTGTTGAATGGGGAATTCCCAATTGGCATCTTCCACCTACCAAACTTAGAGGTTCTTGATGTGAATGGTAACTCATACCTTACCGGTTATTTTCCTAACTTTAACAGGAGCAATGCCCTCAAGAAATTGAATGTTGCCAACACGAATTTCTCTGGCCAACTGCCTAACTCCCTCGGAAACCTTCATTCCTTGACTACTTTTGCCATCTCATTGTGTAATTTTCATCCCAATGTTCCATCTTCTTCATTGGCAAACCTTACCCAACTCGGTTACCTTTCCATGTCTACATTTAATGACGTTTCCAAAGGCAAGCTATCTGTTTCTTTTTCTTGGGTTGGAAAACTAACCAAACTCTACCACTTGAGCCTTGGAGATACCAACATAAAGGGAGAATTCCCATCTTTTGTGTCTAACCTGACACAACTTGAATTTCTAGACTTGTCCGATAATGAAATATCTGGTCAAATCCCATCTTGGCTTATGAAGTTGACCCAGTTAACCACTCTAAGCCTTGGCGATAACAATTTGCAAGGACCAATTCCTAGGTCGCTCTTCCAACTCAAAAATCTTGAATATCTTTCTCTTTCCAGTAATAACTTGAGTGGGTTGGTTGAGTTTGATCAGTTTTCCAAGCTCAAAAAGTTGAAGCGCCTTCTATTATCGGACAACATGTTATCTGTGGAGATCAGAAATGATTTAAGTGCTACTCTTCCAAAGCTTCAAACTCTAGCACTGGGCTCCTGCAACTTAACAGAGTTTCCAAATTTTTTGAAAAATCAATCCGAATTGACTAAGCTAGACCTTTCTGAGAACTATATTCACGGCCCAATACCGAAATGGCTATGGAATGCAACTATTGAAACTTTGTGGGGACTCCGTCTCTATGACAACTTTTTGACAGGATTTGACCAATATCCAGGCATTCTCCCATGGACAAATCTGAACTATCTGGGTCTTGGGTCTAACATGTTACAAGGACCTCTGCCAATTCCCCCGCAATCAATCAGATTATATGATGTCGAAAACAACGAATATACTGGAGAAATTTCACCCCTGTTCTGCAACTTCAGTAATCTCCAAGTTCTCAGGTTGTCCAACAACAGCCTCAGTGGCATGCTTCCACAATGTTTGGGTAACTCTAGTGTTTTGGAAGTATTGGGCCTGCATAACAATTTTTTTAATGGATATATTCCTCCAATATGTCCAAGCAAAACTAGTCTGAGAATTGTTGATTTTAGTTATAATCAGTTGCAGGGGAAGCTACCAAGAGGGGTGATGAATTGTACTCAGTTAAATGTTCTTAATTTTGCAAACAATCAGATGAGTGACATCTTCCCATCTTGGTTAGGGGCACTTCCAGAATTAAGGAGTCTCATTTTGCGGTCCAATGGATTTCATGGCGTAATTGGGAAGCCTGCAACTAAACATGAATTCCCAAATTTGCGCATCATTGACTTATCTAACAATGGTTTCTCAGGTATGTTGCCCTCTAACTACTTCGAGATTTGGAATTCCATGAAATATGTTGACGAAAACCAGCAAACTTACTTTGAAGTAGATACGGATGTCGTCGGTGGAAGTTACTTTCAAAGTGATTACGCAATGACAATAAGTGGTAAAGGTGTTCAGTTGAAATATGAAAAGACCCCTTATCTTCTCACAGTCATAGATCTGTCAAGTAATAGATTTGAAGGAGAGATTCCAGAAGGTCCCGTTGGGAACCTAAGAGGCCTTGTTTTGCTGAACCTTTCCAACAACTCTCTCACTGGTCACATCCCCTCATCTTTAGGGGACTTGGCTTTTCTCGAATCGTTAGATCTCTCCCAGAACCAGCTCTCAGGAAGGATCCCGAGTAATTTAGCACAACTCACTTTCCTTGCATATTTTAATGTATCCCATAACCATCTCTCCGGGCCTATACCACTTGGCAAACAATTCGATACATTCCAGGAGGACTCGTACGAAGGAAACTCAGGTCTGTGTGGAAAGTCTCTGCCAAAGAAATGTGAAGATTCTGAGAGCTCAACGCGGCCACCATCATCAATCGTGGGAGATGATGAAGACTCTGTATTTCAAATTGCACTAGATTGGTACGTGGTTGTGCCAGGAGTTGTTAGTGGTCTGATAGTTGGAGTGGTTGTTGGGAACATATGGACAACAAAGAAGCACGAATGGTTTGTGGAGACATTTAGTAGGAGGAGGAAGCCAAGAAGCACAAGGGCTAGGAGGGGACGCAGAACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

990

Amino Acids

110.27

Weight (kDa)

5.7

Isoelectric Point (pI)

36.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1968
AarI CACCTGC 1 cut(s) 94
Acc16I TGCGCA 1 cut(s) 2171
Acc36I ACCTGC 1 cut(s) 94
AccI GTMKAC 2 cut(s) 518, 1010
AccII CGCG 2 cut(s) 214, 2755
AccIII TCCGGA 1 cut(s) 476
AciI CCGC 5 cut(s) 352, 624, 1721, 2107, 2755
AclWI GGATC 3 cut(s) 173, 2566, 2579
AcoI YGGCCR 4 cut(s) 106, 280, 880, 2756
AcuI CTGAAG 1 cut(s) 1777
AfaI GTAC 4 cut(s) 662, 2011, 2687, 2819
AflIII ACRYGT 2 cut(s) 1395, 1692
AgeI ACCGGT 1 cut(s) 809
AhlI ACTAGT 1 cut(s) 1940
AjnI CCWGG 5 cut(s) 108, 606, 1642, 2673, 2830
AjuI GAANNNNNNNTTGG 6 cut(s) 732, 764, 857, 889, 2424, 2456
Alw21I GWGCWC 2 cut(s) 125, 2750
Alw26I GTCTC 5 cut(s) 320, 1610, 2102, 2721, 2903
AlwI GGATC 3 cut(s) 173, 2566, 2579
Ama87I CYCGRG 1 cut(s) 2575
Aor13HI TCCGGA 1 cut(s) 476
AoxI GGCC 9 cut(s) 106, 280, 292, 880, 1549, 1885, 2455, 2639, 2756
ApeKI GCWGC 2 cut(s) 133, 309
AsiGI ACCGGT 1 cut(s) 809
AspA2I CCTAGG 1 cut(s) 1268
AspLEI GCGC 2 cut(s) 1377, 2172
AspS9I GGNCC 7 cut(s) 1259, 1550, 1703, 1885, 2109, 2435, 2639
AsuC2I CCSGG 1 cut(s) 2638
AsuHPI GGTGA 4 cut(s) 75, 437, 1767, 2011
AsuII TTCGAA 1 cut(s) 437
AvaI CYCGRG 1 cut(s) 2575
AvaII GGWCC 4 cut(s) 1259, 1703, 2109, 2435
AvrII CCTAGG 1 cut(s) 1268
BaeGI GKGCMC 1 cut(s) 2080
BaeI ACNNNNGTAYC 2 cut(s) 2277, 2310
BalI TGGCCA 3 cut(s) 108, 282, 882
BamHI GGATCC 1 cut(s) 2571
BanII GRGCYC 2 cut(s) 1466, 2750
BbsI GAAGAC 2 cut(s) 279, 2793
Bbv12I GWGCWC 2 cut(s) 125, 2750
BbvI GCAGC 2 cut(s) 120, 321
BceAI ACGGC 1 cut(s) 1564
BcgI CGANNNNNNTGC 2 cut(s) 2644, 2678
BciT130I CCWGG 5 cut(s) 110, 608, 1644, 2675, 2832
BciVI GTATCC 1 cut(s) 2629
BclI TGATCA 1 cut(s) 1345
BcnI CCSGG 1 cut(s) 2638
BcoDI GTCTC 5 cut(s) 320, 1610, 2102, 2721, 2903
BcuI ACTAGT 1 cut(s) 1940
BfaI CTAG 8 cut(s) 1160, 1269, 1454, 1523, 1866, 1941, 2810, 2949
BfmI CTRYAG 2 cut(s) 134, 174
BfoI RGCGCY 1 cut(s) 1378
BfuAI ACCTGC 1 cut(s) 94
BfuI GTATCC 1 cut(s) 2629
BglI GCCNNNNNGGC 1 cut(s) 1836
BglII AGATCT 2 cut(s) 2395, 2542
BisI GCNGC 3 cut(s) 134, 310, 2756
BlnI CCTAGG 1 cut(s) 1268
BlpI GCTNAGC 1 cut(s) 124
BlsI GCNGC 3 cut(s) 135, 311, 2757
Bme1390I CCNGG 6 cut(s) 110, 608, 1644, 2638, 2675, 2832
Bme18I GGWCC 4 cut(s) 1259, 1703, 2109, 2435
BmeT110I CYCGRG 1 cut(s) 2575
BmgT120I GGNCC 7 cut(s) 1259, 1550, 1703, 1885, 2109, 2435, 2639
BmiI GGNNCC 4 cut(s) 1465, 2437, 2447, 2573
BmrFI CCNGG 6 cut(s) 110, 608, 1644, 2638, 2675, 2832
BmrI ACTGGG 2 cut(s) 1213, 1469
BmsI GCATC 3 cut(s) 701, 762, 2181
BmuI ACTGGG 2 cut(s) 1213, 1469
BpiI GAAGAC 2 cut(s) 279, 2793
BplI GAGNNNNNCTC 2 cut(s) 647, 679
BpmI CTGGAG 1 cut(s) 1785
Bpu1102I GCTNAGC 1 cut(s) 124
Bpu14I TTCGAA 1 cut(s) 437
BpuEI CTTGAG 3 cut(s) 830, 1108, 1345
BpuMI CCSGG 1 cut(s) 2638
BsaAI YACGTR 1 cut(s) 2821
BsaBI GATNNNNATC 1 cut(s) 228
BsaJI CCNNGG 5 cut(s) 898, 1093, 1237, 1268, 1655
BsaWI WCCGGW 2 cut(s) 476, 809
BsaXI ACNNNNNCTCC 8 cut(s) 226, 256, 2618, 2648, 2669, 2699, 2850, 2880
Bse118I RCCGGY 1 cut(s) 809
Bse1I ACTGG 5 cut(s) 1219, 1314, 1464, 1768, 2497
Bse3DI GCAATG 2 cut(s) 844, 2334
Bse8I GATNNNNATC 1 cut(s) 228
BseAI TCCGGA 1 cut(s) 476
BseBI CCWGG 5 cut(s) 110, 608, 1644, 2675, 2832
BseDI CCNNGG 5 cut(s) 898, 1093, 1237, 1268, 1655
BseGI GGATG 4 cut(s) 259, 949, 2296, 2499
BseJI GATNNNNATC 1 cut(s) 228
BseMI GCAATG 2 cut(s) 844, 2334
BseNI ACTGG 5 cut(s) 1219, 1314, 1464, 1768, 2497
BseRI GAGGAG 1 cut(s) 2938
BseSI GKGCMC 1 cut(s) 2080
BseXI GCAGC 2 cut(s) 120, 321
BsgI GTGCAG 1 cut(s) 72
Bsh1236I CGCG 2 cut(s) 214, 2755
BshFI GGCC 9 cut(s) 108, 282, 294, 882, 1551, 1887, 2457, 2641, 2758
BshTI ACCGGT 1 cut(s) 809
BsiHKAI GWGCWC 2 cut(s) 125, 2750
BsiHKCI CYCGRG 1 cut(s) 2575
BsiSI CCGG 3 cut(s) 477, 810, 2637
BsiWI CGTACG 1 cut(s) 2685
BslFI GGGAC 3 cut(s) 1611, 2421, 2531
BsmAI GTCTC 5 cut(s) 320, 1610, 2102, 2721, 2903
BsmBI CGTCTC 1 cut(s) 1610
BsmFI GGGAC 3 cut(s) 1611, 2421, 2531
BsmI GAATGC 2 cut(s) 1579, 1647
BsnI GGCC 9 cut(s) 108, 282, 294, 882, 1551, 1887, 2457, 2641, 2758
BsoBI CYCGRG 1 cut(s) 2575
Bsp119I TTCGAA 1 cut(s) 437
Bsp1286I GDGCHC 4 cut(s) 125, 1466, 2080, 2750
Bsp13I TCCGGA 1 cut(s) 476
Bsp143I GATC 9 cut(s) 178, 298, 430, 526, 1345, 1410, 2395, 2542, 2571
Bsp1720I GCTNAGC 1 cut(s) 124
Bsp19I CCATGG 1 cut(s) 1655
BspACI CCGC 5 cut(s) 352, 624, 1721, 2107, 2755
BspANI GGCC 9 cut(s) 108, 282, 294, 882, 1551, 1887, 2457, 2641, 2758
BspEI TCCGGA 1 cut(s) 476
BspFNI CGCG 2 cut(s) 214, 2755
BspLI GGNNCC 4 cut(s) 1465, 2437, 2447, 2573
BspMAI CTGCAG 2 cut(s) 138, 178
BspMI ACCTGC 1 cut(s) 94
BspPI GGATC 3 cut(s) 173, 2566, 2579
BspQI GCTCTTC 1 cut(s) 1283
BspT104I TTCGAA 1 cut(s) 437
BsrDI GCAATG 2 cut(s) 844, 2334
BsrFI RCCGGY 1 cut(s) 809
BsrI ACTGG 5 cut(s) 1219, 1314, 1464, 1768, 2497
BssAI RCCGGY 1 cut(s) 809
BssECI CCNNGG 5 cut(s) 898, 1093, 1237, 1268, 1655
BssMI GATC 9 cut(s) 178, 298, 430, 526, 1345, 1410, 2395, 2542, 2571
BssT1I CCWWGG 4 cut(s) 1093, 1237, 1268, 1655
Bst2UI CCWGG 5 cut(s) 110, 608, 1644, 2675, 2832
Bst4CI ACNGT 4 cut(s) 77, 323, 670, 2389
Bst6I CTCTTC 3 cut(s) 353, 1283, 1440
BstBAI YACGTR 1 cut(s) 2821
BstBI TTCGAA 1 cut(s) 437
BstC8I GCNNGC 4 cut(s) 1037, 1841, 1889, 2142
BstDSI CCRYGG 1 cut(s) 1655
BstEII GGTNACC 1 cut(s) 995
BstF5I GGATG 4 cut(s) 259, 949, 2296, 2499
BstFNI CGCG 2 cut(s) 214, 2755
BstH2I RGCGCY 1 cut(s) 1378
BstHHI GCGC 2 cut(s) 1377, 2172
BstKTI GATC 9 cut(s) 181, 301, 433, 529, 1348, 1413, 2398, 2545, 2574
BstMAI GTCTC 5 cut(s) 320, 1610, 2102, 2721, 2903
BstMBI GATC 9 cut(s) 178, 298, 430, 526, 1345, 1410, 2395, 2542, 2571
BstMWI GCNNNNNNNGC 2 cut(s) 1836, 1984
BstNI CCWGG 5 cut(s) 110, 608, 1644, 2675, 2832
BstNSI RCATGY 3 cut(s) 1399, 1696, 1843
BstPI GGTNACC 1 cut(s) 995
BstSCI CCNGG 6 cut(s) 108, 606, 1642, 2636, 2673, 2830
BstSFI CTRYAG 2 cut(s) 134, 174
BstSLI GKGCMC 1 cut(s) 2080
BstUI CGCG 2 cut(s) 214, 2755
BstV1I GCAGC 2 cut(s) 120, 321
BstV2I GAAGAC 2 cut(s) 279, 2793
BstX2I RGATCY 4 cut(s) 178, 2395, 2542, 2571
BstYI RGATCY 4 cut(s) 178, 2395, 2542, 2571
BsuI GTATCC 1 cut(s) 2629
BsuRI GGCC 9 cut(s) 108, 282, 294, 882, 1551, 1887, 2457, 2641, 2758
BtgI CCRYGG 1 cut(s) 1655
BtsCI GGATG 4 cut(s) 259, 949, 2296, 2499
BtsI GCAGTG 1 cut(s) 374
BtsIMutI CAGTG 6 cut(s) 73, 374, 666, 1457, 1840, 2490
BveI ACCTGC 1 cut(s) 94
Cac8I GCNNGC 4 cut(s) 1037, 1841, 1889, 2142
CfoI GCGC 2 cut(s) 1377, 2172
Cfr10I RCCGGY 1 cut(s) 809
Cfr13I GGNCC 7 cut(s) 1259, 1550, 1703, 1885, 2109, 2435, 2639
CseI GACGC 1 cut(s) 220
Csp6I GTAC 4 cut(s) 661, 2010, 2686, 2818
CspAI ACCGGT 1 cut(s) 809
CspCI CAANNNNNGTGG 2 cut(s) 1836, 1871
CviQI GTAC 4 cut(s) 661, 2010, 2686, 2818
DpnI GATC 9 cut(s) 180, 300, 432, 528, 1347, 1412, 2397, 2544, 2573
DpnII GATC 9 cut(s) 178, 298, 430, 526, 1345, 1410, 2395, 2542, 2571
EaeI YGGCCR 4 cut(s) 106, 280, 880, 2756
Eam1104I CTCTTC 3 cut(s) 353, 1283, 1440
EarI CTCTTC 3 cut(s) 353, 1283, 1440
EciI GGCGGA 1 cut(s) 341
Ecl136II GAGCTC 1 cut(s) 2748
Eco130I CCWWGG 4 cut(s) 1093, 1237, 1268, 1655
Eco147I AGGCCT 1 cut(s) 2457
Eco24I GRGCYC 2 cut(s) 1466, 2750
Eco32I GATATC 1 cut(s) 679
Eco47I GGWCC 4 cut(s) 1259, 1703, 2109, 2435
Eco53kI GAGCTC 1 cut(s) 2748
Eco57I CTGAAG 1 cut(s) 1777
Eco88I CYCGRG 1 cut(s) 2575
Eco91I GGTNACC 1 cut(s) 995
EcoICRI GAGCTC 1 cut(s) 2748
EcoO109I RGGNCCY 2 cut(s) 1703, 2435
EcoO65I GGTNACC 1 cut(s) 995
EcoRI GAATTC 4 cut(s) 740, 1118, 2156, 2236
EcoRII CCWGG 5 cut(s) 108, 606, 1642, 2673, 2830
EcoRV GATATC 1 cut(s) 679
EcoT14I CCWWGG 4 cut(s) 1093, 1237, 1268, 1655
EcoT22I ATGCAT 1 cut(s) 694
EcoT38I GRGCYC 2 cut(s) 1466, 2750
ErhI CCWWGG 4 cut(s) 1093, 1237, 1268, 1655
Esp3I CGTCTC 1 cut(s) 1610
FalI AAGNNNNNCTT 2 cut(s) 134, 166
FaqI GGGAC 3 cut(s) 1611, 2421, 2531
FauI CCCGC 1 cut(s) 1728
FauNDI CATATG 1 cut(s) 2876
FbaI TGATCA 1 cut(s) 1345
FblI GTMKAC 2 cut(s) 518, 1010
Fnu4HI GCNGC 3 cut(s) 134, 310, 2756
FokI GGATG 4 cut(s) 266, 936, 2303, 2486
FriOI GRGCYC 2 cut(s) 1466, 2750
Fsp4HI GCNGC 3 cut(s) 134, 310, 2756
FspBI CTAG 8 cut(s) 1160, 1269, 1454, 1523, 1866, 1941, 2810, 2949
FspI TGCGCA 1 cut(s) 2171
GlaI GCGC 2 cut(s) 1376, 2171
GluI GCNGC 3 cut(s) 134, 310, 2756
GsuI CTGGAG 1 cut(s) 1785
HaeII RGCGCY 1 cut(s) 1378
HaeIII GGCC 9 cut(s) 108, 282, 294, 882, 1551, 1887, 2457, 2641, 2758
HapII CCGG 3 cut(s) 477, 810, 2637
HgaI GACGC 1 cut(s) 220
HhaI GCGC 2 cut(s) 1377, 2172
Hin6I GCGC 2 cut(s) 1375, 2170
HinP1I GCGC 2 cut(s) 1375, 2170
HincII GTYRAC 3 cut(s) 1215, 1224, 2254
HindII GTYRAC 3 cut(s) 1215, 1224, 2254
HindIII AAGCTT 2 cut(s) 148, 1442
HpaI GTTAAC 1 cut(s) 1224
HpaII CCGG 3 cut(s) 477, 810, 2637
HphI GGTGA 4 cut(s) 75, 437, 1767, 2011
Hpy166II GTNNAC 6 cut(s) 361, 519, 1011, 1215, 1224, 2254
Hpy8I GTNNAC 6 cut(s) 361, 519, 1011, 1215, 1224, 2254
Hpy99I CGWCG 1 cut(s) 2300
HpyAV CCTTC 8 cut(s) 190, 212, 917, 1388, 2411, 2426, 2562, 2684
HpyCH4III ACNGT 4 cut(s) 77, 323, 670, 2389
HpyCH4IV ACGT 2 cut(s) 1023, 2820
HpyF10VI GCNNNNNNNGC 2 cut(s) 1836, 1984
HpySE526I ACGT 2 cut(s) 1023, 2820
HspAI GCGC 2 cut(s) 1375, 2170
Kpn2I TCCGGA 1 cut(s) 476
Ksp22I TGATCA 1 cut(s) 1345
KspAI GTTAAC 1 cut(s) 1224
Kzo9I GATC 9 cut(s) 178, 298, 430, 526, 1345, 1410, 2395, 2542, 2571
LguI GCTCTTC 1 cut(s) 1283
LmnI GCTCC 2 cut(s) 834, 1469
Lsp1109I GCAGC 2 cut(s) 120, 321
LweI GCATC 3 cut(s) 701, 762, 2181
MaeI CTAG 8 cut(s) 1160, 1269, 1454, 1523, 1866, 1941, 2810, 2949
MaeII ACGT 2 cut(s) 1023, 2820
MaeIII GTNAC 7 cut(s) 794, 995, 1695, 1859, 2051, 2306, 2495
MalI GATC 9 cut(s) 180, 300, 432, 528, 1347, 1412, 2397, 2544, 2573
MboI GATC 9 cut(s) 178, 298, 430, 526, 1345, 1410, 2395, 2542, 2571
MfeI CAATTG 1 cut(s) 747
MflI RGATCY 4 cut(s) 178, 2395, 2542, 2571
MhlI GDGCHC 4 cut(s) 125, 1466, 2080, 2750
MlsI TGGCCA 3 cut(s) 108, 282, 882
MluNI TGGCCA 3 cut(s) 108, 282, 882
MlyI GAGTC 4 cut(s) 1593, 2104, 2675, 2783
MmeI TCCRAC 6 cut(s) 736, 1042, 1306, 1845, 2502, 2836
Mox20I TGGCCA 3 cut(s) 108, 282, 882
Mph1103I ATGCAT 1 cut(s) 694
MroI TCCGGA 1 cut(s) 476
MscI TGGCCA 3 cut(s) 108, 282, 882
MslI CAYNNNNRTG 1 cut(s) 954
Msp20I TGGCCA 3 cut(s) 108, 282, 882
MspA1I CMGCKG 1 cut(s) 312
MspI CCGG 3 cut(s) 477, 810, 2637
MspR9I CCNGG 6 cut(s) 110, 608, 1644, 2638, 2675, 2832
MunI CAATTG 1 cut(s) 747
Mva1269I GAATGC 2 cut(s) 1579, 1647
MvaI CCWGG 5 cut(s) 110, 608, 1644, 2675, 2832
MvnI CGCG 2 cut(s) 214, 2755
MwoI GCNNNNNNNGC 2 cut(s) 1836, 1984
NciI CCSGG 1 cut(s) 2638
NcoI CCATGG 1 cut(s) 1655
NdeI CATATG 1 cut(s) 2876
NdeII GATC 9 cut(s) 178, 298, 430, 526, 1345, 1410, 2395, 2542, 2571
NlaIV GGNNCC 4 cut(s) 1465, 2437, 2447, 2573
NmuCI GTSAC 2 cut(s) 2051, 2495
NsbI TGCGCA 1 cut(s) 2171
NsiI ATGCAT 1 cut(s) 694
NspI RCATGY 3 cut(s) 1399, 1696, 1843
NspV TTCGAA 1 cut(s) 437
PaeI GCATGC 1 cut(s) 1843
PaqCI CACCTGC 1 cut(s) 94
PceI AGGCCT 1 cut(s) 2457
PciI ACATGT 2 cut(s) 1395, 1692
PciSI GCTCTTC 1 cut(s) 1283
PcsI WCGNNNNNNNCGW 2 cut(s) 20, 1752
PctI GAATGC 2 cut(s) 1579, 1647
PfeI GAWTC 6 cut(s) 11, 229, 439, 2425, 2534, 2738
Pfl23II CGTACG 1 cut(s) 2685
PflFI GACNNNGTC 1 cut(s) 1602
PfoI TCCNGGA 1 cut(s) 2673
PinAI ACCGGT 1 cut(s) 809
PkrI GCNGC 3 cut(s) 135, 311, 2757
PleI GAGTC 4 cut(s) 1593, 2103, 2675, 2783
PpsI GAGTC 4 cut(s) 1593, 2103, 2675, 2783
Ppu21I YACGTR 1 cut(s) 2821
PpuMI RGGWCCY 2 cut(s) 1703, 2435
PscI ACATGT 2 cut(s) 1395, 1692
PsiI TTATAA 1 cut(s) 1968
Psp124BI GAGCTC 1 cut(s) 2750
Psp5II RGGWCCY 2 cut(s) 1703, 2435
Psp6I CCWGG 5 cut(s) 108, 606, 1642, 2673, 2830
PspEI GGTNACC 1 cut(s) 995
PspGI CCWGG 5 cut(s) 108, 606, 1642, 2673, 2830
PspLI CGTACG 1 cut(s) 2685
PspN4I GGNNCC 4 cut(s) 1465, 2437, 2447, 2573
PspPI GGNCC 7 cut(s) 1259, 1550, 1703, 1885, 2109, 2435, 2639
PspPPI RGGWCCY 2 cut(s) 1703, 2435
PsrI GAACNNNNNNTAC 2 cut(s) 229, 261
PstI CTGCAG 2 cut(s) 138, 178
PsuI RGATCY 4 cut(s) 178, 2395, 2542, 2571
PsyI GACNNNGTC 1 cut(s) 1602
PvuII CAGCTG 1 cut(s) 312
RsaI GTAC 4 cut(s) 662, 2011, 2687, 2819
RsaNI GTAC 4 cut(s) 661, 2010, 2686, 2818
RseI CAYNNNNRTG 1 cut(s) 954
SacI GAGCTC 1 cut(s) 2750
SapI GCTCTTC 1 cut(s) 1283
SatI GCNGC 3 cut(s) 134, 310, 2756
Sau3AI GATC 9 cut(s) 178, 298, 430, 526, 1345, 1410, 2395, 2542, 2571
Sau96I GGNCC 7 cut(s) 1259, 1550, 1703, 1885, 2109, 2435, 2639
SchI GAGTC 4 cut(s) 1593, 2104, 2675, 2783
ScrFI CCNGG 6 cut(s) 110, 608, 1644, 2638, 2675, 2832
SduI GDGCHC 4 cut(s) 125, 1466, 2080, 2750
SfaNI GCATC 3 cut(s) 701, 762, 2181
SfcI CTRYAG 2 cut(s) 134, 174
SfuI TTCGAA 1 cut(s) 437
SinI GGWCC 4 cut(s) 1259, 1703, 2109, 2435
SmiMI CAYNNNNRTG 1 cut(s) 954
SmlI CTYRAG 3 cut(s) 845, 1087, 1324
SmoI CTYRAG 3 cut(s) 845, 1087, 1324
SpeI ACTAGT 1 cut(s) 1940
SphI GCATGC 1 cut(s) 1843
SseBI AGGCCT 1 cut(s) 2457
SsiI CCGC 5 cut(s) 352, 624, 1721, 2107, 2755
SspMI CTAG 8 cut(s) 1160, 1269, 1454, 1523, 1866, 1941, 2810, 2949
SstI GAGCTC 1 cut(s) 2750
StuI AGGCCT 1 cut(s) 2457
StyD4I CCNGG 6 cut(s) 108, 606, 1642, 2636, 2673, 2830
StyI CCWWGG 4 cut(s) 1093, 1237, 1268, 1655
TaaI ACNGT 4 cut(s) 77, 323, 670, 2389
TaiI ACGT 2 cut(s) 1026, 2823
TaqI TCGA 7 cut(s) 23, 437, 509, 1746, 2226, 2532, 2664
TatI WGTACW 2 cut(s) 660, 2009
TauI GCSGC 1 cut(s) 2758
TfiI GAWTC 6 cut(s) 11, 229, 439, 2425, 2534, 2738
TscAI CASTG 6 cut(s) 80, 374, 673, 1464, 1840, 2497
TseFI GTSAC 2 cut(s) 2051, 2495
TseI GCWGC 2 cut(s) 133, 309
Tsp45I GTSAC 2 cut(s) 2051, 2495
TspGWI ACGGA 3 cut(s) 293, 1592, 2303
TspRI CASTG 6 cut(s) 80, 374, 673, 1464, 1840, 2497
Tth111I GACNNNGTC 1 cut(s) 1602
VpaK11BI GGWCC 4 cut(s) 1259, 1703, 2109, 2435
XbaI TCTAGA 1 cut(s) 1159
XceI RCATGY 3 cut(s) 1399, 1696, 1843
XcmI CCANNNNNNNNNTGG 2 cut(s) 1091, 1560
XmaJI CCTAGG 1 cut(s) 1268
XmiI GTMKAC 2 cut(s) 518, 1010
XspI CTAG 8 cut(s) 1160, 1269, 1454, 1523, 1866, 1941, 2810, 2949
Zsp2I ATGCAT 1 cut(s) 694
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.