pycom09g04810

receptor-like protein 12

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Reverse (-)
3553907 .. 3556870
2964 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g04810.1

Sequence Viewer

Length: 2964 bp
ATGAAAATGGAATCGTGGTTGTCCAAGTTTACCTATTTGCATTGTCTTCTTTTGCTATTACTCAATGCTACTCATTGTTTTTCATTTGTGCAGATTCAGACACGGACACTTTGCCATGCTGATGAGCACTCGTTCTTGTTACAATTCAAGGAAAGCTTTATGATAAACAAGTCAGCTTCTTCATCTCCTTTTGCTTACCCAAAGGTTGCATCTTGGACTCGAGAAGGAGATCATAATCAGAGTAACTGTTGTTCGTGGGATGGTGTTGAGTGCCATACGGAGTCTGGTCATGTCATTGGCCTTGACCTCAAGAGCAGCTGTCTCTATGGTTCTATCAATTCCAACAACACCCTCTTCCGACTTGTTCACTTGCAGATGCTTGACCTCTCAGATAACAACTTCAATTCGTCTGAAATACCATCGAGATTGGGCCATGACCTTTCGAGTCTATCCTATCTCAACCTTTCACTGTCTGCATTTTCTGGTCAAATTCCATCTGAAATTTCAAAGTTATCCAAACTGTCTACCCTTGATCTGTCTCACAATAATGGTTTGGAGCTTAGGAAGTCCAACATGAGAATCCTAGTCCAAAACTTGACCAGCATAAAACAACTTCATCTTAGTAATGTAGGCATATACTCCACTGTGCCTGATATCTTAGTCAACGCATCTTCTCTCACATCTCTTAATCTAAGCAAATGTGGGTGGTATGGGGAATTTCCAGTCGGCATTTTCCACCTACCAAACCTAGAGGAGCTTAGTTTATACTCAAACATAAAGCTAAATGGTTATTTTCCTACTTTTAACCGGACCAATTCCTTCAAAACATTGGATGTTTCATCGACAAATTTCTCTGGTGAACTTCCTAGTTCTATCGGAAACCTTCATTCCTTAAACTACTTTGATATCTCATACTGTGGTTTTGATTCCCATGTTCCATCTTCATTTGGAAACCTTACCCAGCTCAGTTTCCTTGAGATGGCTTCATTTCATGATGTTTCCGCAGGCCAATTCTTAGTTCCTAATTCCTTGTCTTGTTTTGGAAAATTAACCAAGCTCAACTACTTGGATCTTTCGGATATTAACTTACAGGGGAATTTCCCACGTTTTGTGGCTAACCTGACCCAACTTGCGTTTCTAGACTTGTTTGACAATTCACTAACTGGTGAAATCCCATCTTGGCTCACATTAGAGTTGAACCAACTAACTTTTCTACGGCTCACCTTCAACGATTTGCAAGGAGCAGTTCCTAAGTCGCTTTTCCACCTCAGAAATCTTGAATTTCTTGGCCTTTCCTCTAATAATTTGAGTGGAATAGTTGAGTTTGATGAGTTTTCCAACCTCAAAAAGTTGAAGAAACTTGGTTTATCAGACAACAAGTTATCTGTGCGTGTCAAATCTGGTTCAAGTGCTACTCTTCCAAAGTTCGAAGTTCTAAAGTTGGCTGAATGCAACTTGACAGAGTTTCCAGAATTTTTGAAAAATCAATACGAATTGGGAGCCCTGGACCTTTATGATAACAATATTCATGGCCAAATACCAAAATGGCTCTGGAATGCAACTAGAGAAACTTTGGTCAATCTTAACCTCAATTATAACTTCTTAACAGGCCTTGAAGAAAATCCAGTCACTCTTCCATGGAAAAATCTGCAACTTTTTAGTCTTGACAGTAATCGGTTACAAGGGTCATTGCCAATTCCACCACAATCTATCATGTCTTACAGCGTCGGCAACAATAATTATAGTGGAGAAGTTTCACCATTGTTCTGCAACTTGAATTATCTTCAAGTTCTTAATTTGGGCAACAACAGCCTGAGTGGCATGCTTCCACAGTGTTTGGGGAAGTCCAATAGCTTGGAAATGCTGGCCTTGACTTATAATTCTTTCCATGGTGATATTCCTCCATTTTGCGCTATAAAAAATAGTTTGAAATTGGTTTTGTTGGGTTACAATCGGTTACAGGGGAAGCTACCAAGATCGATCGCCAATTGCACTCAGTTAGAGTTTCTTCACATTGGCAACAATCAGATCAGTGATATCTTCCCTTCTTGGTTAGGGGTACTTCCAGTATTAAGGGGTCTCATTTTGGGGTCGAATGCATTTCATGGGATAATTGGGAAGCCTCCAACTAATTATGAGTTCCCAAACTTGTGCATCATTGATTTATCCAACAATCTGTTTTCAGGTATGTTGCCTTCTAAGTACATGGAGAACTGGAGTTTCATGAAATATGTTGTCGCAAACAATGGAAGCCGGTACTTTGAAGTCTCATCGAGCACAGATAAATATGGAAATTACTATCAATTTTCATACGATATGATAATTCCTGTAAAAGGTGTTAAGTTGACATATTATCGGACCCCTTATGATCTGAGACTCTTAGATTTCTCAAGTAATAGATTTGAAGGAGAGATTCCAGCAAGTATCATTGGAAGTCTAAGAGAACTTCAGTTGCTAAACCTCTCCAAAAATTCACTCTCTAGCCACATCCCCTCATCTTTAGGGAACTTGACTGCTCTTGAATCGTTGGATCTATCTCAAAACAAGCTCTCCGGAAGGATCCCCGGTAGCTTGGCACAACTCACTTTCCTTGAGTACTTCAATGTGTCGCATAACCATCTTTGGGGGCCTATACCACTTGGCCAACAATTTGGTACATTCCTAGAAGATTCATACCAAGGAAACTCAGGTCTGTGTGGAAAGCCTTTGTCCAAGAAATGCGAGGGTTCTGAGAGCTCGAGGTTGCCGCCACCATCAAGCTTTGAAGAAGATGAAGAGGCTGGATTTCCATTTGAGTTTGACTGGTATGTAGTCTTGCCGGGAGTTGTTAGCGGACTCATAGTGGGAGTGGTTGCTGGAAACACGTTGGCAGACAATAAGCATGAATGGTTTGTGGAGAAATTCAGCAGGAAGAGGAAGCCAACAACCACAGGGGCGAGGAGGGGGACGCAGAACCAAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

988

Amino Acids

110.24

Weight (kDa)

6.2

Isoelectric Point (pI)

36.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 101 - 229 8.6e-07 Leucine-rich repeat region
LRR_14 PF23598 275 - 331 4.5e-06 Leucine-rich repeat region
LRR_14 PF23598 341 - 532 1.1e-10 Leucine-rich repeat region
LRR_8 PF13855 401 - 461 1.6e-06 Leucine rich repeat
LRR_14 PF23598 791 - 871 2.1e-07 Leucine-rich repeat region
LRR_8 PF13855 791 - 850 1.5e-06 Leucine rich repeat
LRR_8 PF13855 814 - 874 3.5e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1596, 1878
AccI GTMKAC 1 cut(s) 524
AccIII TCCGGA 1 cut(s) 2552
AciI CCGC 3 cut(s) 1002, 2747, 2832
AclWI GGATC 4 cut(s) 1077, 2538, 2554, 2567
AcoI YGGCCR 2 cut(s) 1531, 2641
AcsI RAATTY 9 cut(s) 489, 501, 716, 847, 1096, 1280, 1472, 2470, 2900
AcuI CTGAAG 1 cut(s) 2432
AfaI GTAC 5 cut(s) 2061, 2204, 2258, 2597, 2656
AfiI CCNNNNNNNGG 3 cut(s) 979, 2333, 2623
AflIII ACRYGT 1 cut(s) 2862
AjnI CCWGG 1 cut(s) 1503
AjuI GAANNNNNNNTTGG 6 cut(s) 1002, 1034, 1119, 1151, 1194, 1226
Alw21I GWGCWC 3 cut(s) 129, 2279, 2738
Alw26I GTCTC 5 cut(s) 326, 543, 2084, 2272, 2368
AlwI GGATC 4 cut(s) 1077, 2538, 2554, 2567
Ama87I CYCGRG 2 cut(s) 219, 2737
Aor13HI TCCGGA 1 cut(s) 2552
AoxI GGCC 9 cut(s) 298, 430, 1006, 1288, 1531, 1609, 1866, 2627, 2641
ApeKI GCWGC 1 cut(s) 315
ApoI RAATTY 9 cut(s) 489, 501, 716, 847, 1096, 1280, 1472, 2470, 2900
AspLEI GCGC 1 cut(s) 1913
AspS9I GGNCC 5 cut(s) 430, 810, 1507, 2358, 2627
AsuC2I CCSGG 2 cut(s) 2565, 2820
AsuHPI GGTGA 5 cut(s) 869, 1178, 1213, 1749, 1904
AsuII TTCGAA 1 cut(s) 1428
AvaI CYCGRG 2 cut(s) 219, 2737
AvaII GGWCC 3 cut(s) 810, 1507, 2358
BalI TGGCCA 2 cut(s) 1533, 2643
BamHI GGATCC 1 cut(s) 2559
BanII GRGCYC 2 cut(s) 1504, 2738
BarI GAAGNNNNNNTAC 2 cut(s) 2179, 2211
BbsI GAAGAC 1 cut(s) 38
Bbv12I GWGCWC 3 cut(s) 129, 2279, 2738
BbvI GCAGC 1 cut(s) 327
BccI CCATC 8 cut(s) 254, 427, 502, 946, 973, 1183, 2625, 2761
BceAI ACGGC 1 cut(s) 1232
BciT130I CCWGG 1 cut(s) 1505
BcnI CCSGG 2 cut(s) 2565, 2820
BcoDI GTCTC 5 cut(s) 326, 543, 2084, 2272, 2368
BfaI CTAG 7 cut(s) 584, 749, 867, 1139, 1563, 2481, 2663
BglI GCCNNNNNGGC 1 cut(s) 1818
BisI GCNGC 2 cut(s) 316, 2747
BlsI GCNGC 2 cut(s) 317, 2748
BmcAI AGTACT 1 cut(s) 2597
Bme1390I CCNGG 3 cut(s) 1505, 2565, 2820
Bme18I GGWCC 3 cut(s) 810, 1507, 2358
BmeT110I CYCGRG 2 cut(s) 219, 2737
BmgT120I GGNCC 5 cut(s) 430, 810, 1507, 2358, 2627
BmiI GGNNCC 4 cut(s) 1501, 2360, 2561, 2628
BmrFI CCNGG 3 cut(s) 1505, 2565, 2820
BmsI GCATC 4 cut(s) 218, 366, 677, 2163
BpiI GAAGAC 1 cut(s) 38
BpmI CTGGAG 1 cut(s) 2236
Bpu10I CCTNAGC 1 cut(s) 560
Bpu14I TTCGAA 1 cut(s) 1428
BpuEI CTTGAG 4 cut(s) 293, 995, 2374, 2612
BpuMI CCSGG 2 cut(s) 2565, 2820
Bsa29I ATCGAT 1 cut(s) 1979
BsaBI GATNNNNATC 1 cut(s) 234
BsaI GGTCTC 1 cut(s) 2084
BsaJI CCNNGG 5 cut(s) 1503, 1637, 1888, 2563, 2677
BsaWI WCCGGW 2 cut(s) 807, 2552
BsaXI ACNNNNNCTCC 2 cut(s) 2534, 2564
Bsc4I CCNNNNNNNGG 3 cut(s) 979, 2333, 2623
Bse118I RCCGGY 1 cut(s) 2253
Bse1I ACTGG 6 cut(s) 722, 1168, 1625, 2066, 2219, 2807
Bse3DI GCAATG 1 cut(s) 1688
Bse8I GATNNNNATC 1 cut(s) 234
BseAI TCCGGA 1 cut(s) 2552
BseBI CCWGG 1 cut(s) 1505
BseCI ATCGAT 1 cut(s) 1979
BseDI CCNNGG 5 cut(s) 1503, 1637, 1888, 2563, 2677
BseGI GGATG 3 cut(s) 265, 838, 2487
BseJI GATNNNNATC 1 cut(s) 234
BseLI CCNNNNNNNGG 3 cut(s) 979, 2333, 2623
BseMI GCAATG 1 cut(s) 1688
BseMII CTCAG 8 cut(s) 402, 979, 1282, 1805, 2009, 2363, 2700, 2721
BseNI ACTGG 6 cut(s) 722, 1168, 1625, 2066, 2219, 2807
BseRI GAGGAG 2 cut(s) 767, 2953
BseXI GCAGC 1 cut(s) 327
BseYI CCCAGC 1 cut(s) 960
BsgI GTGCAG 1 cut(s) 110
Bsh1285I CGRYCG 1 cut(s) 1983
BshFI GGCC 9 cut(s) 300, 432, 1008, 1290, 1533, 1611, 1868, 2629, 2643
BshVI ATCGAT 1 cut(s) 1979
BsiEI CGRYCG 1 cut(s) 1983
BsiHKAI GWGCWC 3 cut(s) 129, 2279, 2738
BsiHKCI CYCGRG 2 cut(s) 219, 2737
BsiSI CCGG 5 cut(s) 808, 2254, 2553, 2565, 2819
BslFI GGGAC 1 cut(s) 2959
BslI CCNNNNNNNGG 3 cut(s) 979, 2333, 2623
BsmAI GTCTC 5 cut(s) 326, 543, 2084, 2272, 2368
BsmFI GGGAC 1 cut(s) 2959
BsmI GAATGC 3 cut(s) 1454, 1561, 2101
BsnI GGCC 9 cut(s) 300, 432, 1008, 1290, 1533, 1611, 1868, 2629, 2643
Bso31I GGTCTC 1 cut(s) 2084
BsoBI CYCGRG 2 cut(s) 219, 2737
Bsp119I TTCGAA 1 cut(s) 1428
Bsp1286I GDGCHC 4 cut(s) 129, 1504, 2279, 2738
Bsp13I TCCGGA 1 cut(s) 2552
Bsp143I GATC 9 cut(s) 229, 532, 1069, 1976, 1980, 2028, 2368, 2530, 2559
Bsp19I CCATGG 2 cut(s) 1637, 1888
BspACI CCGC 3 cut(s) 1002, 2747, 2832
BspANI GGCC 9 cut(s) 300, 432, 1008, 1290, 1533, 1611, 1868, 2629, 2643
BspCNI CTCAG 8 cut(s) 401, 978, 1281, 1806, 2008, 2364, 2699, 2722
BspDI ATCGAT 1 cut(s) 1979
BspEI TCCGGA 1 cut(s) 2552
BspHI TCATGA 2 cut(s) 991, 2223
BspLI GGNNCC 4 cut(s) 1501, 2360, 2561, 2628
BspPI GGATC 4 cut(s) 1077, 2538, 2554, 2567
BspT104I TTCGAA 1 cut(s) 1428
BspTNI GGTCTC 1 cut(s) 2084
BsrDI GCAATG 1 cut(s) 1688
BsrFI RCCGGY 1 cut(s) 2253
BsrI ACTGG 6 cut(s) 722, 1168, 1625, 2066, 2219, 2807
BssAI RCCGGY 1 cut(s) 2253
BssECI CCNNGG 5 cut(s) 1503, 1637, 1888, 2563, 2677
BssMI GATC 9 cut(s) 229, 532, 1069, 1976, 1980, 2028, 2368, 2530, 2559
BssT1I CCWWGG 3 cut(s) 1637, 1888, 2677
Bst2UI CCWGG 1 cut(s) 1505
Bst4CI ACNGT 7 cut(s) 248, 471, 522, 646, 917, 1670, 1833
Bst6I CTCTTC 5 cut(s) 359, 1422, 1638, 2769, 2906
BstBI TTCGAA 1 cut(s) 1428
BstC8I GCNNGC 3 cut(s) 1006, 1823, 1866
BstDSI CCRYGG 2 cut(s) 1637, 1888
BstENI CCTNNNNNAGG 1 cut(s) 2331
BstF5I GGATG 3 cut(s) 265, 838, 2487
BstHHI GCGC 1 cut(s) 1913
BstKTI GATC 9 cut(s) 232, 535, 1072, 1979, 1983, 2031, 2371, 2533, 2562
BstMAI GTCTC 5 cut(s) 326, 543, 2084, 2272, 2368
BstMBI GATC 9 cut(s) 229, 532, 1069, 1976, 1980, 2028, 2368, 2530, 2559
BstMCI CGRYCG 1 cut(s) 1983
BstMWI GCNNNNNNNGC 2 cut(s) 1809, 1818
BstNI CCWGG 1 cut(s) 1505
BstNSI RCATGY 1 cut(s) 1825
BstSCI CCNGG 3 cut(s) 1503, 2563, 2818
BstV1I GCAGC 1 cut(s) 327
BstV2I GAAGAC 1 cut(s) 38
BstX2I RGATCY 3 cut(s) 1069, 2530, 2559
BstXI CCANNNNNNTGG 2 cut(s) 1855, 2651
BstYI RGATCY 3 cut(s) 1069, 2530, 2559
Bsu15I ATCGAT 1 cut(s) 1979
BsuRI GGCC 9 cut(s) 300, 432, 1008, 1290, 1533, 1611, 1868, 2629, 2643
BsuTUI ATCGAT 1 cut(s) 1979
BtgI CCRYGG 2 cut(s) 1637, 1888
BtsCI GGATG 3 cut(s) 265, 838, 2487
BtsIMutI CAGTG 4 cut(s) 467, 642, 1838, 2038
Cac8I GCNNGC 3 cut(s) 1006, 1823, 1866
CciI TCATGA 2 cut(s) 991, 2223
CfoI GCGC 1 cut(s) 1913
Cfr10I RCCGGY 1 cut(s) 2253
Cfr13I GGNCC 5 cut(s) 430, 810, 1507, 2358, 2627
ClaI ATCGAT 1 cut(s) 1979
CseI GACGC 2 cut(s) 1714, 2956
Csp6I GTAC 5 cut(s) 2060, 2203, 2257, 2596, 2655
CspCI CAANNNNNGTGG 2 cut(s) 1818, 1853
CviQI GTAC 5 cut(s) 2060, 2203, 2257, 2596, 2655
DpnI GATC 9 cut(s) 231, 534, 1071, 1978, 1982, 2030, 2370, 2532, 2561
DpnII GATC 9 cut(s) 229, 532, 1069, 1976, 1980, 2028, 2368, 2530, 2559
EaeI YGGCCR 2 cut(s) 1531, 2641
Eam1104I CTCTTC 5 cut(s) 359, 1422, 1638, 2769, 2906
EarI CTCTTC 5 cut(s) 359, 1422, 1638, 2769, 2906
Ecl136II GAGCTC 1 cut(s) 2736
Eco130I CCWWGG 3 cut(s) 1637, 1888, 2677
Eco147I AGGCCT 1 cut(s) 1611
Eco24I GRGCYC 2 cut(s) 1504, 2738
Eco31I GGTCTC 1 cut(s) 2084
Eco32I GATATC 3 cut(s) 655, 907, 2038
Eco47I GGWCC 3 cut(s) 810, 1507, 2358
Eco53kI GAGCTC 1 cut(s) 2736
Eco57I CTGAAG 1 cut(s) 2432
Eco88I CYCGRG 2 cut(s) 219, 2737
EcoICRI GAGCTC 1 cut(s) 2736
EcoNI CCTNNNNNAGG 1 cut(s) 2331
EcoO109I RGGNCCY 1 cut(s) 2627
EcoRII CCWGG 1 cut(s) 1503
EcoRV GATATC 3 cut(s) 655, 907, 2038
EcoT14I CCWWGG 3 cut(s) 1637, 1888, 2677
EcoT22I ATGCAT 1 cut(s) 2101
EcoT38I GRGCYC 2 cut(s) 1504, 2738
ErhI CCWWGG 3 cut(s) 1637, 1888, 2677
FalI AAGNNNNNCTT 2 cut(s) 140, 172
FaqI GGGAC 1 cut(s) 2959
FblI GTMKAC 1 cut(s) 524
Fnu4HI GCNGC 2 cut(s) 316, 2747
FokI GGATG 3 cut(s) 272, 845, 2474
FriOI GRGCYC 2 cut(s) 1504, 2738
Fsp4HI GCNGC 2 cut(s) 316, 2747
FspBI CTAG 7 cut(s) 584, 749, 867, 1139, 1563, 2481, 2663
GlaI GCGC 1 cut(s) 1912
GluI GCNGC 2 cut(s) 316, 2747
GsaI CCCAGC 1 cut(s) 964
GsuI CTGGAG 1 cut(s) 2236
HaeIII GGCC 9 cut(s) 300, 432, 1008, 1290, 1533, 1611, 1868, 2629, 2643
HapII CCGG 5 cut(s) 808, 2254, 2553, 2565, 2819
HgaI GACGC 2 cut(s) 1714, 2956
HhaI GCGC 1 cut(s) 1913
Hin6I GCGC 1 cut(s) 1911
HinP1I GCGC 1 cut(s) 1911
HincII GTYRAC 2 cut(s) 664, 2346
HindII GTYRAC 2 cut(s) 664, 2346
HindIII AAGCTT 3 cut(s) 154, 2758, 2958
HpaII CCGG 5 cut(s) 808, 2254, 2553, 2565, 2819
HphI GGTGA 5 cut(s) 869, 1178, 1213, 1749, 1904
Hpy166II GTNNAC 6 cut(s) 30, 367, 525, 664, 860, 2346
Hpy8I GTNNAC 6 cut(s) 30, 367, 525, 664, 860, 2346
Hpy99I CGWCG 1 cut(s) 1730
HpyAV CCTTC 8 cut(s) 218, 829, 893, 1234, 2055, 2205, 2399, 2550
HpyCH4III ACNGT 7 cut(s) 248, 471, 522, 646, 917, 1670, 1833
HpyCH4IV ACGT 2 cut(s) 1105, 2864
HpyF10VI GCNNNNNNNGC 2 cut(s) 1809, 1818
HpySE526I ACGT 2 cut(s) 1105, 2864
HspAI GCGC 1 cut(s) 1911
Kpn2I TCCGGA 1 cut(s) 2552
Kzo9I GATC 9 cut(s) 229, 532, 1069, 1976, 1980, 2028, 2368, 2530, 2559
LmnI GCTCC 4 cut(s) 556, 754, 1241, 1499
Lsp1109I GCAGC 1 cut(s) 327
LweI GCATC 4 cut(s) 218, 366, 677, 2163
MaeI CTAG 7 cut(s) 584, 749, 867, 1139, 1563, 2481, 2663
MaeII ACGT 2 cut(s) 1105, 2864
MaeIII GTNAC 6 cut(s) 138, 242, 1627, 1677, 1946, 1956
MalI GATC 9 cut(s) 231, 534, 1071, 1978, 1982, 2030, 2370, 2532, 2561
MboI GATC 9 cut(s) 229, 532, 1069, 1976, 1980, 2028, 2368, 2530, 2559
MfeI CAATTG 1 cut(s) 1987
MflI RGATCY 3 cut(s) 1069, 2530, 2559
MhlI GDGCHC 4 cut(s) 129, 1504, 2279, 2738
MlsI TGGCCA 2 cut(s) 1533, 2643
MluNI TGGCCA 2 cut(s) 1533, 2643
MlyI GAGTC 5 cut(s) 211, 290, 454, 2370, 2829
MmeI TCCRAC 7 cut(s) 366, 382, 594, 1362, 2150, 2193, 2508
Mox20I TGGCCA 2 cut(s) 1533, 2643
Mph1103I ATGCAT 1 cut(s) 2101
MroI TCCGGA 1 cut(s) 2552
MscI TGGCCA 2 cut(s) 1533, 2643
MslI CAYNNNNRTG 2 cut(s) 120, 546
Msp20I TGGCCA 2 cut(s) 1533, 2643
MspA1I CMGCKG 1 cut(s) 318
MspI CCGG 5 cut(s) 808, 2254, 2553, 2565, 2819
MspR9I CCNGG 3 cut(s) 1505, 2565, 2820
MunI CAATTG 1 cut(s) 1987
Mva1269I GAATGC 3 cut(s) 1454, 1561, 2101
MvaI CCWGG 1 cut(s) 1505
MwoI GCNNNNNNNGC 2 cut(s) 1809, 1818
NciI CCSGG 2 cut(s) 2565, 2820
NcoI CCATGG 2 cut(s) 1637, 1888
NdeII GATC 9 cut(s) 229, 532, 1069, 1976, 1980, 2028, 2368, 2530, 2559
NlaIV GGNNCC 4 cut(s) 1501, 2360, 2561, 2628
NmuCI GTSAC 1 cut(s) 1627
NsiI ATGCAT 1 cut(s) 2101
NspI RCATGY 1 cut(s) 1825
NspV TTCGAA 1 cut(s) 1428
PaeI GCATGC 1 cut(s) 1825
PaeR7I CTCGAG 2 cut(s) 219, 2737
PagI TCATGA 2 cut(s) 991, 2223
PceI AGGCCT 1 cut(s) 1611
PctI GAATGC 3 cut(s) 1454, 1561, 2101
PfeI GAWTC 7 cut(s) 11, 94, 579, 926, 2413, 2522, 2669
PkrI GCNGC 2 cut(s) 317, 2748
Ple19I CGATCG 1 cut(s) 1983
PleI GAGTC 5 cut(s) 211, 289, 453, 2370, 2829
PpsI GAGTC 5 cut(s) 211, 289, 453, 2370, 2829
PsiI TTATAA 2 cut(s) 1596, 1878
Psp124BI GAGCTC 1 cut(s) 2738
Psp6I CCWGG 1 cut(s) 1503
PspFI CCCAGC 1 cut(s) 960
PspGI CCWGG 1 cut(s) 1503
PspN4I GGNNCC 4 cut(s) 1501, 2360, 2561, 2628
PspPI GGNCC 5 cut(s) 430, 810, 1507, 2358, 2627
PspXI VCTCGAGB 1 cut(s) 2737
PsrI GAACNNNNNNTAC 2 cut(s) 235, 267
PsuI RGATCY 3 cut(s) 1069, 2530, 2559
PvuI CGATCG 1 cut(s) 1983
PvuII CAGCTG 1 cut(s) 318
RsaI GTAC 5 cut(s) 2061, 2204, 2258, 2597, 2656
RsaNI GTAC 5 cut(s) 2060, 2203, 2257, 2596, 2655
RseI CAYNNNNRTG 2 cut(s) 120, 546
SacI GAGCTC 1 cut(s) 2738
SatI GCNGC 2 cut(s) 316, 2747
Sau3AI GATC 9 cut(s) 229, 532, 1069, 1976, 1980, 2028, 2368, 2530, 2559
Sau96I GGNCC 5 cut(s) 430, 810, 1507, 2358, 2627
ScaI AGTACT 1 cut(s) 2597
SchI GAGTC 5 cut(s) 211, 290, 454, 2370, 2829
ScrFI CCNGG 3 cut(s) 1505, 2565, 2820
SduI GDGCHC 4 cut(s) 129, 1504, 2279, 2738
SfaNI GCATC 4 cut(s) 218, 366, 677, 2163
Sfr274I CTCGAG 2 cut(s) 219, 2737
SfuI TTCGAA 1 cut(s) 1428
SinI GGWCC 3 cut(s) 810, 1507, 2358
SlaI CTCGAG 2 cut(s) 219, 2737
SmiMI CAYNNNNRTG 2 cut(s) 120, 546
SmlI CTYRAG 6 cut(s) 219, 308, 974, 2389, 2591, 2737
SmoI CTYRAG 6 cut(s) 219, 308, 974, 2389, 2591, 2737
SphI GCATGC 1 cut(s) 1825
SseBI AGGCCT 1 cut(s) 1611
SsiI CCGC 3 cut(s) 1002, 2747, 2832
SspI AATATT 1 cut(s) 1525
SspMI CTAG 7 cut(s) 584, 749, 867, 1139, 1563, 2481, 2663
SstI GAGCTC 1 cut(s) 2738
StuI AGGCCT 1 cut(s) 1611
StyD4I CCNGG 3 cut(s) 1503, 2563, 2818
StyI CCWWGG 3 cut(s) 1637, 1888, 2677
TaaI ACNGT 7 cut(s) 248, 471, 522, 646, 917, 1670, 1833
TaiI ACGT 2 cut(s) 1108, 2867
TaqI TCGA 9 cut(s) 220, 422, 443, 842, 1428, 1979, 2093, 2273, 2738
TatI WGTACW 2 cut(s) 2202, 2595
TauI GCSGC 1 cut(s) 2749
TfiI GAWTC 7 cut(s) 11, 94, 579, 926, 2413, 2522, 2669
TscAI CASTG 4 cut(s) 474, 649, 1838, 2038
TseFI GTSAC 1 cut(s) 1627
TseI GCWGC 1 cut(s) 315
Tsp45I GTSAC 1 cut(s) 1627
TspGWI ACGGA 2 cut(s) 118, 293
TspRI CASTG 4 cut(s) 474, 649, 1838, 2038
VpaK11BI GGWCC 3 cut(s) 810, 1507, 2358
XagI CCTNNNNNAGG 1 cut(s) 2331
XapI RAATTY 9 cut(s) 489, 501, 716, 847, 1096, 1280, 1472, 2470, 2900
XbaI TCTAGA 1 cut(s) 1138
XceI RCATGY 1 cut(s) 1825
XcmI CCANNNNNNNNNTGG 2 cut(s) 281, 1548
XhoI CTCGAG 2 cut(s) 219, 2737
XmiI GTMKAC 1 cut(s) 524
XspI CTAG 7 cut(s) 584, 749, 867, 1139, 1563, 2481, 2663
ZrmI AGTACT 1 cut(s) 2597
Zsp2I ATGCAT 1 cut(s) 2101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.