Rroxscaffold_2G00125300

Receptor-like protein 12

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
60048483 .. 60051299
2817 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00125300.1

Sequence Viewer

Length: 2652 bp
ATGTTTCGGTTGCTAAATGATCTTGATACTACGTACACTTTCCGGCAGCTATCTTATTGTCATGATGAGGAGAGCTCTGCCTTGCTACAATTCAAGCAAAGCTTTACTATCAATGCATCTGCTTCGGGTTTAGAGGGTGCTTGTCCGAAAGTGTTGTCCTGGAAACAAGCTCAAGGAGGAAACACCACCAACTGCTGCACATGGGATGGGGTCGAGTGTGACGAACACACGGGTCATGTGATCGGGCTTGATCTCAGAAGCAGTTGTCTCTACGGCTCTATTCACTCCAACAGCTCCCTCTTCCGTCTTGTTCACCTTCAGAGGCTGAACCTTGCCGATAATCACTTCAATTACTCTCAAATTCCTACTGGTATTAGAAATTTTCCAAGGCTTACCCATCTTGACCTCTCTGGCTCTGTATTTTCTGGTCGAGTCCCTTCGGAAGTTTCACAGTTGGTCAAGTTGTCACTTCTTGATCTTTCTTCCAATACCGAACCTTCTTCAGATGTAGGATTGTTGACACTTGATGGATCCAATTTCAGAAGTCTAGTTCTAAACTTAACTAATCTCCAACATCTTTTTCTCCGTTTCATCAACATATCTTCGCCAATACCTGATTCCATGGCCAATTTATCATTTTTGACAACCCTTGACTTACATCAGTGTCACTTATTTGGAGACTTCCCAGCTAGAATTTTCCAGTTACAAAACTTGCAAAATCTCTATCTCAGAGACAACCAAGATCTTATTGGTTATTTGCCTGAATTTAATAAAAGTAGTCCTCTCAAAACTCTCGATGTTCATGGAACTAGATTTTCAGGGAACTTAGCCTTTTCTATCAGAAATCTTGGTTCTTTGAAACAGTTGGATGTGGCTGCCTGCAATTTTTCAGCAGGGTTGGTTCCATCTTCGATAGGTAATCTCAGAGAACTGACTTATCTAGATATTTCAGCAAACCAATTTGGAGGTCCTGTTCCTGATTCTTTTGTAAACCTTACAAAATTGTCTGTTTTTAGGATTAGTACGAGTCTACTGACTGGTCCAATCCCATCCTGGCTGGGTAATTTTAGCGAACTAGAGTTCCTAGACTTTGGTTATAACAGATTGGGTGCTGTGAATGCAAGTACTGTTCCACAGTTCACCCAACTAAGGTTAACTTCATGCAACGTAAGAGAGTTCCCATATTTCTTGAGATATCAAAAACATTTGGAGCGGTTGATGCTCAATAAAAACAAAATCCATGGTCAAGTACCGAAATGGATGTGGAATATGAGCACGGAATCCTTGCTTCAGCTAGACATTTCTGAAAATTTCCTTTCAGGCCAACTTCCTGTTTTCATTCCTTGGGTCAAACAACTATACTTGAGTCTTGCTTCCAACATGTTCCATGGGCCACTGCCGATACCTCCATCATCCACTTCAGTCTATCTAGCTAATGACAACAAATTTACTGGAAAAGTTTCACCAGTGATCTGCAATATGAGTTCTCTTATAGCCCTTGATTTGTCCAATAACAACTTAAGTGGCCTGATTCCGCAGTGTTTTGGAAACTTTAGTGATCCATTGACACTTTTACTTCTTGGAAATAACTCGTTTCATGGAACTCTACCGCAGACATACACCAACAAAAGCAGCTTGAGGATACTTGATGCGAGTCAAAATCAATTGCAAGGAAAACTACCAAGGTCATTGGCGAATTGTCTGATGCTTGATACTTTGCTCCTGTCAAACAATTACTTCAATGATGTCTTTCCCTTTTGGATGGTTACTCTACCTGAGTTGAAAATTTTGGCAATGCGGTATAATGCGTTCCAAGGATTGATAGGAAAGCCTGAGAACAATCAGCAGTTCCCAAAGTTGCGTGTCTTAGATATTTCTCACAATAACTTCACAGGCAAGTTTGTAGCTGAATACATCTTCTCCAAGTATGCCATGAGATCAGTCCACCAGTCGACCTATATGTTCGTTGGCATCAATTACATCTCTGGTACTAGTGAGTGGCAAATTTATAGTTCCAGGATTAATATAGCCATTAAAGGTGTGGATAGATACTATTCAAGGGTTCAAGAAGCTTTTGCAGTCATTCATATCTCAAGCAACAAATTTGAAGGGAAGATTGATGAATCCATTGGGAGTCTAAAAGGGCTTTGGTCACTTAATTTTTCTAACAATCATCTCAGTGGTCGTATCCCGTCATCGTTTGGGAACTTGATGAATCTTGAAGCACTAGACCTTTCCAATAACAAGCTCTGGGGAGAGATTCCCAAACAATTGGCACAGCTGACATTCCTTGCAGAATTCAGTGTCTCTCACAACAATCTCACAGGTGCAATACCGCGTGGACCGCAACTCAATACCTTCTCTATCAATTCATATGAGGGAAATCCTGGATTGTGCGGAGATCCTTTGCCAAAGAGATGTCAGAGCTCTAACGCCCCGCCGCAACTGCCACCTTTAAACACAGAAGAAAATGATTCTGGAATTGAATTTGAATGGACTTTTGTGCTCGCTGGATGCGGAAGTGGGTTCGTGGTGGGAGTTGTGCTTGCGGACCTGGCCATCACACGGAGGCGTGAGTTGTTTCTTGAGATAGTTGGAATGTTGATCAGACTAATGGAAAGGATCACAAGCTTGAAGAGGTTTGGACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

883

Amino Acids

98.68

Weight (kDa)

7.57

Isoelectric Point (pI)

41.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 21 - 74 2e-07 Leucine rich repeat N-terminal domain
LRR_14 PF23598 83 - 173 2.5e-06 Leucine-rich repeat region
LRR_14 PF23598 184 - 295 2.8e-08 Leucine-rich repeat region
LRR_14 PF23598 255 - 367 2.4e-08 Leucine-rich repeat region
LRR_8 PF13855 570 - 630 6.1e-06 Leucine rich repeat
LRR_8 PF13855 694 - 750 8.8e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1098
AccBSI CCGCTC 1 cut(s) 1213
AccI GTMKAC 2 cut(s) 1030, 1952
AccII CGCG 1 cut(s) 2338
AclWI GGATC 5 cut(s) 525, 538, 1553, 2396, 2630
AcoI YGGCCR 2 cut(s) 624, 2556
AcuI CTGAAG 4 cut(s) 302, 486, 1274, 1404
AfaI GTAC 5 cut(s) 35, 1024, 1126, 1251, 1990
AfiI CCNNNNNNNGG 2 cut(s) 1149, 2565
AflII CTTAAG 1 cut(s) 1519
AflIII ACRYGT 1 cut(s) 1380
AhlI ACTAGT 1 cut(s) 1991
AjnI CCWGG 5 cut(s) 158, 1052, 2015, 2386, 2553
AjuI GAANNNNNNNTTGG 4 cut(s) 564, 596, 601, 633
AloI GAACNNNNNNTCC 4 cut(s) 957, 989, 1065, 1097
Alw21I GWGCWC 4 cut(s) 77, 1277, 2429, 2508
Alw26I GTCTC 4 cut(s) 272, 672, 726, 2311
AlwI GGATC 5 cut(s) 525, 538, 1553, 2396, 2630
AlwNI CAGNNNCTG 1 cut(s) 325
AoxI GGCC 5 cut(s) 624, 1321, 1391, 1525, 2556
ApeKI GCWGC 4 cut(s) 46, 195, 875, 1632
ArsI GACNNNNNNTTYG 2 cut(s) 140, 172
AseI ATTAAT 1 cut(s) 2022
Asp700I GAANNNNTTC 1 cut(s) 1459
AspS9I GGNCC 5 cut(s) 968, 1040, 1391, 2342, 2551
AsuHPI GGTGA 3 cut(s) 305, 1132, 1455
AvaII GGWCC 4 cut(s) 968, 1040, 2342, 2551
BalI TGGCCA 2 cut(s) 626, 2558
BamHI GGATCC 1 cut(s) 530
BanII GRGCYC 2 cut(s) 77, 2429
Bbv12I GWGCWC 4 cut(s) 77, 1277, 2429, 2508
BbvI GCAGC 4 cut(s) 58, 182, 862, 1644
BccI CCATC 8 cut(s) 200, 405, 521, 913, 1057, 1417, 1756, 2567
BceAI ACGGC 1 cut(s) 289
BcgI CGANNNNNNTGC 2 cut(s) 105, 139
BciT130I CCWGG 5 cut(s) 160, 1054, 2017, 2388, 2555
BciVI GTATCC 2 cut(s) 1635, 2198
BclI TGATCA 1 cut(s) 2604
BcoDI GTCTC 4 cut(s) 272, 672, 726, 2311
BcuI ACTAGT 1 cut(s) 1991
BfrI CTTAAG 1 cut(s) 1519
BfuI GTATCC 2 cut(s) 1635, 2198
BglII AGATCT 1 cut(s) 742
BisI GCNGC 5 cut(s) 47, 196, 876, 1633, 2441
BlsI GCNGC 5 cut(s) 48, 197, 877, 1634, 2442
BmcAI AGTACT 1 cut(s) 1126
Bme1390I CCNGG 5 cut(s) 160, 1054, 2017, 2388, 2555
Bme18I GGWCC 4 cut(s) 968, 1040, 2342, 2551
BmgT120I GGNCC 5 cut(s) 968, 1040, 1391, 2342, 2551
BmiI GGNNCC 2 cut(s) 532, 903
BmrFI CCNGG 5 cut(s) 160, 1054, 2017, 2388, 2555
BmsI GCATC 6 cut(s) 125, 1209, 1639, 1695, 1980, 2504
BplI GAGNNNNNCTC 2 cut(s) 59, 91
BpuEI CTTGAG 6 cut(s) 156, 1210, 1384, 1657, 2077, 2606
BsaAI YACGTR 1 cut(s) 33
BsaJI CCNNGG 7 cut(s) 386, 621, 1240, 1343, 1387, 1682, 1813
BsaXI ACNNNNNCTCC 4 cut(s) 957, 987, 1904, 1934
Bsc4I CCNNNNNNNGG 2 cut(s) 1149, 2565
Bse1I ACTGG 6 cut(s) 373, 700, 1042, 1456, 1466, 1948
Bse3DI GCAATG 1 cut(s) 1800
BseBI CCWGG 5 cut(s) 160, 1054, 2017, 2388, 2555
BseDI CCNNGG 7 cut(s) 386, 621, 1240, 1343, 1387, 1682, 1813
BseGI GGATG 7 cut(s) 211, 874, 1049, 1266, 1412, 1767, 2519
BseLI CCNNNNNNNGG 2 cut(s) 1149, 2565
BseMI GCAATG 1 cut(s) 1800
BseMII CTCAG 6 cut(s) 268, 742, 937, 1767, 1824, 2191
BseNI ACTGG 6 cut(s) 373, 700, 1042, 1456, 1466, 1948
BseRI GAGGAG 1 cut(s) 83
BseXI GCAGC 4 cut(s) 58, 182, 862, 1644
BseYI CCCAGC 2 cut(s) 685, 1057
BsgI GTGCAG 1 cut(s) 181
Bsh1236I CGCG 1 cut(s) 2338
BshFI GGCC 5 cut(s) 626, 1323, 1393, 1527, 2558
BsiHKAI GWGCWC 4 cut(s) 77, 1277, 2429, 2508
BsiSI CCGG 1 cut(s) 43
BslFI GGGAC 1 cut(s) 419
BslI CCNNNNNNNGG 2 cut(s) 1149, 2565
BsmAI GTCTC 4 cut(s) 272, 672, 726, 2311
BsmFI GGGAC 1 cut(s) 419
BsmI GAATGC 1 cut(s) 1123
BsnI GGCC 5 cut(s) 626, 1323, 1393, 1527, 2558
Bsp1286I GDGCHC 4 cut(s) 77, 1277, 2429, 2508
Bsp19I CCATGG 3 cut(s) 621, 1240, 1387
BspANI GGCC 5 cut(s) 626, 1323, 1393, 1527, 2558
BspCNI CTCAG 6 cut(s) 267, 741, 936, 1768, 1825, 2190
BspFNI CGCG 1 cut(s) 2338
BspHI TCATGA 1 cut(s) 61
BspLI GGNNCC 2 cut(s) 532, 903
BspPI GGATC 5 cut(s) 525, 538, 1553, 2396, 2630
BspTI CTTAAG 1 cut(s) 1519
BsrBI CCGCTC 1 cut(s) 1213
BsrDI GCAATG 1 cut(s) 1800
BsrI ACTGG 6 cut(s) 373, 700, 1042, 1456, 1466, 1948
BssECI CCNNGG 7 cut(s) 386, 621, 1240, 1343, 1387, 1682, 1813
BssT1I CCWWGG 7 cut(s) 386, 621, 1240, 1343, 1387, 1682, 1813
Bst2UI CCWGG 5 cut(s) 160, 1054, 2017, 2388, 2555
Bst4CI ACNGT 4 cut(s) 453, 864, 1129, 1137
Bst6I CTCTTC 2 cut(s) 305, 2630
BstAFI CTTAAG 1 cut(s) 1519
BstBAI YACGTR 1 cut(s) 33
BstC8I GCNNGC 3 cut(s) 880, 2508, 2547
BstDEI CTNAG 9 cut(s) 254, 728, 826, 923, 1148, 1776, 1833, 1867, 2177
BstDSI CCRYGG 3 cut(s) 621, 1240, 1387
BstF5I GGATG 7 cut(s) 211, 874, 1049, 1266, 1412, 1767, 2519
BstFNI CGCG 1 cut(s) 2338
BstMAI GTCTC 4 cut(s) 272, 672, 726, 2311
BstMWI GCNNNNNNNGC 5 cut(s) 1118, 1219, 2344, 2446, 2555
BstNI CCWGG 5 cut(s) 160, 1054, 2017, 2388, 2555
BstNSI RCATGY 1 cut(s) 1384
BstSCI CCNGG 5 cut(s) 158, 1052, 2015, 2386, 2553
BstSNI TACGTA 1 cut(s) 33
BstUI CGCG 1 cut(s) 2338
BstV1I GCAGC 4 cut(s) 58, 182, 862, 1644
BstX2I RGATCY 3 cut(s) 530, 742, 2401
BstXI CCANNNNNNTGG 1 cut(s) 2272
BstYI RGATCY 3 cut(s) 530, 742, 2401
BsuI GTATCC 2 cut(s) 1635, 2198
BsuRI GGCC 5 cut(s) 626, 1323, 1393, 1527, 2558
BtgI CCRYGG 3 cut(s) 621, 1240, 1387
BtsCI GGATG 7 cut(s) 211, 874, 1049, 1266, 1412, 1767, 2519
BtsI GCAGTG 2 cut(s) 1394, 1544
BtsIMutI CAGTG 6 cut(s) 668, 1394, 1473, 1544, 2185, 2308
Cac8I GCNNGC 3 cut(s) 880, 2508, 2547
CaiI CAGNNNCTG 1 cut(s) 325
CciI TCATGA 1 cut(s) 61
Cfr13I GGNCC 5 cut(s) 968, 1040, 1391, 2342, 2551
Csp6I GTAC 5 cut(s) 34, 1023, 1125, 1250, 1989
CspCI CAANNNNNGTGG 2 cut(s) 1504, 1539
CviQI GTAC 5 cut(s) 34, 1023, 1125, 1250, 1989
DdeI CTNAG 9 cut(s) 254, 728, 826, 923, 1148, 1776, 1833, 1867, 2177
DraI TTTAAA 1 cut(s) 2457
EaeI YGGCCR 2 cut(s) 624, 2556
Eam1104I CTCTTC 2 cut(s) 305, 2630
EarI CTCTTC 2 cut(s) 305, 2630
Ecl136II GAGCTC 2 cut(s) 75, 2427
Eco105I TACGTA 1 cut(s) 33
Eco130I CCWWGG 7 cut(s) 386, 621, 1240, 1343, 1387, 1682, 1813
Eco24I GRGCYC 2 cut(s) 77, 2429
Eco32I GATATC 1 cut(s) 1196
Eco47I GGWCC 4 cut(s) 968, 1040, 2342, 2551
Eco53kI GAGCTC 2 cut(s) 75, 2427
Eco57I CTGAAG 4 cut(s) 302, 486, 1274, 1404
EcoICRI GAGCTC 2 cut(s) 75, 2427
EcoO109I RGGNCCY 1 cut(s) 968
EcoRI GAATTC 1 cut(s) 2297
EcoRII CCWGG 5 cut(s) 158, 1052, 2015, 2386, 2553
EcoRV GATATC 1 cut(s) 1196
EcoT14I CCWWGG 7 cut(s) 386, 621, 1240, 1343, 1387, 1682, 1813
EcoT22I ATGCAT 1 cut(s) 118
EcoT38I GRGCYC 2 cut(s) 77, 2429
ErhI CCWWGG 7 cut(s) 386, 621, 1240, 1343, 1387, 1682, 1813
FalI AAGNNNNNCTT 4 cut(s) 86, 118, 1141, 1173
FaqI GGGAC 1 cut(s) 419
FauI CCCGC 1 cut(s) 2445
FauNDI CATATG 1 cut(s) 2374
FbaI TGATCA 1 cut(s) 2604
FblI GTMKAC 2 cut(s) 1030, 1952
Fnu4HI GCNGC 5 cut(s) 47, 196, 876, 1633, 2441
FokI GGATG 7 cut(s) 218, 881, 1036, 1273, 1399, 1774, 2526
FriOI GRGCYC 2 cut(s) 77, 2429
Fsp4HI GCNGC 5 cut(s) 47, 196, 876, 1633, 2441
GluI GCNGC 5 cut(s) 47, 196, 876, 1633, 2441
GsaI CCCAGC 2 cut(s) 689, 1061
HaeIII GGCC 5 cut(s) 626, 1323, 1393, 1527, 2558
HapII CCGG 1 cut(s) 43
HincII GTYRAC 3 cut(s) 519, 1155, 1953
HindII GTYRAC 3 cut(s) 519, 1155, 1953
HindIII AAGCTT 3 cut(s) 100, 2070, 2629
HpaI GTTAAC 1 cut(s) 1155
HpaII CCGG 1 cut(s) 43
HphI GGTGA 3 cut(s) 305, 1132, 1455
HpyAV CCTTC 5 cut(s) 326, 447, 507, 2102, 2368
HpyCH4III ACNGT 4 cut(s) 453, 864, 1129, 1137
HpyCH4IV ACGT 2 cut(s) 32, 1167
HpyF10VI GCNNNNNNNGC 5 cut(s) 1118, 1219, 2344, 2446, 2555
HpyF3I CTNAG 9 cut(s) 254, 728, 826, 923, 1148, 1776, 1833, 1867, 2177
HpySE526I ACGT 2 cut(s) 32, 1167
Ksp22I TGATCA 1 cut(s) 2604
KspAI GTTAAC 1 cut(s) 1155
LmnI GCTCC 3 cut(s) 299, 1210, 1725
Lsp1109I GCAGC 4 cut(s) 58, 182, 862, 1644
LweI GCATC 6 cut(s) 125, 1209, 1639, 1695, 1980, 2504
MaeII ACGT 2 cut(s) 32, 1167
MaeIII GTNAC 6 cut(s) 218, 465, 665, 702, 1765, 2151
MbiI CCGCTC 1 cut(s) 1213
MboII GAAGA 9 cut(s) 292, 474, 492, 594, 900, 1909, 2125, 2477, 2647
MfeI CAATTG 2 cut(s) 1664, 2270
MflI RGATCY 3 cut(s) 530, 742, 2401
MhlI GDGCHC 4 cut(s) 77, 1277, 2429, 2508
MlsI TGGCCA 2 cut(s) 626, 2558
MluNI TGGCCA 2 cut(s) 626, 2558
MlyI GAGTC 5 cut(s) 441, 1036, 1375, 1663, 2143
MmeI TCCRAC 5 cut(s) 312, 595, 846, 1401, 2575
Mox20I TGGCCA 2 cut(s) 626, 2558
Mph1103I ATGCAT 1 cut(s) 118
MroXI GAANNNNTTC 1 cut(s) 1459
MscI TGGCCA 2 cut(s) 626, 2558
MseI TTAA 8 cut(s) 560, 768, 1154, 1520, 2022, 2034, 2157, 2456
MslI CAYNNNNRTG 1 cut(s) 2178
Msp20I TGGCCA 2 cut(s) 626, 2558
MspA1I CMGCKG 1 cut(s) 2281
MspCI CTTAAG 1 cut(s) 1519
MspI CCGG 1 cut(s) 43
MspR9I CCNGG 5 cut(s) 160, 1054, 2017, 2388, 2555
MunI CAATTG 2 cut(s) 1664, 2270
Mva1269I GAATGC 1 cut(s) 1123
MvaI CCWGG 5 cut(s) 160, 1054, 2017, 2388, 2555
MvnI CGCG 1 cut(s) 2338
MwoI GCNNNNNNNGC 5 cut(s) 1118, 1219, 2344, 2446, 2555
NcoI CCATGG 3 cut(s) 621, 1240, 1387
NdeI CATATG 1 cut(s) 2374
NlaIV GGNNCC 2 cut(s) 532, 903
NmuCI GTSAC 4 cut(s) 218, 465, 665, 2151
NsiI ATGCAT 1 cut(s) 118
NspI RCATGY 1 cut(s) 1384
PagI TCATGA 1 cut(s) 61
PciI ACATGT 1 cut(s) 1380
PcsI WCGNNNNNNNCGW 1 cut(s) 219
PctI GAATGC 1 cut(s) 1123
PdmI GAANNNNTTC 1 cut(s) 1459
PfeI GAWTC 8 cut(s) 617, 980, 1280, 1531, 2123, 2215, 2260, 2474
PfoI TCCNGGA 3 cut(s) 158, 2015, 2386
PkrI GCNGC 5 cut(s) 48, 197, 877, 1634, 2442
PleI GAGTC 5 cut(s) 440, 1035, 1374, 1662, 2142
PpsI GAGTC 5 cut(s) 440, 1035, 1374, 1662, 2142
Ppu21I YACGTR 1 cut(s) 33
PpuMI RGGWCCY 1 cut(s) 968
PscI ACATGT 1 cut(s) 1380
PshBI ATTAAT 1 cut(s) 2022
PsiI TTATAA 1 cut(s) 1098
Psp124BI GAGCTC 2 cut(s) 77, 2429
Psp5II RGGWCCY 1 cut(s) 968
Psp6I CCWGG 5 cut(s) 158, 1052, 2015, 2386, 2553
PspFI CCCAGC 2 cut(s) 685, 1057
PspGI CCWGG 5 cut(s) 158, 1052, 2015, 2386, 2553
PspN4I GGNNCC 2 cut(s) 532, 903
PspPI GGNCC 5 cut(s) 968, 1040, 1391, 2342, 2551
PspPPI RGGWCCY 1 cut(s) 968
PsrI GAACNNNNNNTAC 2 cut(s) 1793, 1825
PstNI CAGNNNCTG 1 cut(s) 325
PsuI RGATCY 3 cut(s) 530, 742, 2401
PvuII CAGCTG 1 cut(s) 2281
RsaI GTAC 5 cut(s) 35, 1024, 1126, 1251, 1990
RsaNI GTAC 5 cut(s) 34, 1023, 1125, 1250, 1989
RseI CAYNNNNRTG 1 cut(s) 2178
SacI GAGCTC 2 cut(s) 77, 2429
SalI GTCGAC 1 cut(s) 1951
SaqAI TTAA 8 cut(s) 560, 768, 1154, 1520, 2022, 2034, 2157, 2456
SatI GCNGC 5 cut(s) 47, 196, 876, 1633, 2441
Sau96I GGNCC 5 cut(s) 968, 1040, 1391, 2342, 2551
ScaI AGTACT 1 cut(s) 1126
SchI GAGTC 5 cut(s) 441, 1036, 1375, 1663, 2143
ScrFI CCNGG 5 cut(s) 160, 1054, 2017, 2388, 2555
SduI GDGCHC 4 cut(s) 77, 1277, 2429, 2508
SfaNI GCATC 6 cut(s) 125, 1209, 1639, 1695, 1980, 2504
SinI GGWCC 4 cut(s) 968, 1040, 2342, 2551
SmiMI CAYNNNNRTG 1 cut(s) 2178
SmlI CTYRAG 7 cut(s) 171, 1189, 1363, 1519, 1636, 2092, 2585
SmoI CTYRAG 7 cut(s) 171, 1189, 1363, 1519, 1636, 2092, 2585
SnaBI TACGTA 1 cut(s) 33
SpeI ACTAGT 1 cut(s) 1991
SstI GAGCTC 2 cut(s) 77, 2429
StyD4I CCNGG 5 cut(s) 158, 1052, 2015, 2386, 2553
StyI CCWWGG 7 cut(s) 386, 621, 1240, 1343, 1387, 1682, 1813
TaaI ACNGT 4 cut(s) 453, 864, 1129, 1137
TaiI ACGT 2 cut(s) 35, 1170
TaqI TCGA 5 cut(s) 213, 430, 795, 911, 1952
TatI WGTACW 1 cut(s) 1124
TauI GCSGC 1 cut(s) 2443
TfiI GAWTC 8 cut(s) 617, 980, 1280, 1531, 2123, 2215, 2260, 2474
Tru1I TTAA 8 cut(s) 560, 768, 1154, 1520, 2022, 2034, 2157, 2456
Tru9I TTAA 8 cut(s) 560, 768, 1154, 1520, 2022, 2034, 2157, 2456
TscAI CASTG 6 cut(s) 668, 1401, 1473, 1544, 2185, 2308
TseFI GTSAC 4 cut(s) 218, 465, 665, 2151
TseI GCWGC 4 cut(s) 46, 195, 875, 1632
Tsp45I GTSAC 4 cut(s) 218, 465, 665, 2151
TspDTI ATGAA 9 cut(s) 580, 791, 1149, 1327, 1586, 2075, 2136, 2228, 2361
TspGWI ACGGA 4 cut(s) 293, 575, 1292, 2581
TspRI CASTG 6 cut(s) 668, 1401, 1473, 1544, 2185, 2308
Vha464I CTTAAG 1 cut(s) 1519
VpaK11BI GGWCC 4 cut(s) 968, 1040, 2342, 2551
VspI ATTAAT 1 cut(s) 2022
XbaI TCTAGA 1 cut(s) 940
XceI RCATGY 1 cut(s) 1384
XcmI CCANNNNNNNNNTGG 3 cut(s) 746, 1050, 2038
XmiI GTMKAC 2 cut(s) 1030, 1952
XmnI GAANNNNTTC 1 cut(s) 1459
ZrmI AGTACT 1 cut(s) 1126
Zsp2I ATGCAT 1 cut(s) 118
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.