Rw1G018440

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000024
Physical Location & Seq
Forward (+)
40739858 .. 40744300
4443 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G018440.1

Sequence Viewer

Length: 2874 bp
ATGGGGTTATCCCATTGCTTGTTTCTGTTTTTGATTTTTTTATTCAAGGGGTGCAACACCAGTACTTCCCATGAGCCATCTTATTGTCCTGATGAGGAATGCTCTGCGTTGTTACAATTCAAGCACAGCTTTACTATCAACGCCTCTGCTTCGGGTTTAGAGGGTGCTTATCCGAAAGTGTTGTCATGGAAACAAGCTCAAGGAGGAAACAACACCAGCTGCTGCACATGGGATGGGGTTGAGTGTGACGAAAAGACGGGTCATGTGATTGGGCTTGATCTTAGTAGCAGTCATCTCTGCGGCTCTATCAACTCCAGCAGCTCCCTCTTCCATCTTGTTCACCTTCAGAGGCTCAACCTTGCTGATAACGACTTCAAATACTCTCAACTTCCTTCAACTATTAGGAATCTTCCTATGCTCACCCAACTCGACCTCTCTTTCTCCCTCTTTGCTGGTCAAGTCCCATCTCAACTTTCACAGTTGGTTAAGTTGTCACTCCTCAATCTTTCTTGCAATACCGAACCTTCTTCTGGTGTAGGATTGTTGAAACTTGATGGATCCAATTTCAGAAATCTAGTTCAAAACATAACCAGTCTAGAACATCTTCGTCTCCGTTACATCAACATATCTTCGACAATACCCCATTCCATGGCCAATTTATCATTTTTGACAACCCTCGACTTACATCAGTGCGAGTTGTTTGGAGACTTCCCGATAACAATTTTCCACTTCCAAAACTTGAAAAATCTTTTTCTGAGAGACAACCAAGATCTCATTGGTTATTTGCCTGAATTTAATCAAAGTAGTCGTCTCACAACACTCGACGTTCATGGAACTAGATTTTCAGGGAACTTTCCTTCTTCCATCGGAAAGATTAATTCTTTGAAGCAGTTGGATGTGGCTGCATGCAATTTTTCAGCAGGGTTGATTCCATCTTCTCTAGGTAATCTTAGACAGCTCACATATCTAGACATTTCAGCAAACAAATTTGGGGGTCCAATTCCTGATTCTTTTGCAAACCTTACAAAATTGACTAATTTTAGGATTTGTACAAGTCCATTAACTACTGGTCCGGTCCCATCTTGGATAGGTAACTTCAGCAAACTAGTTTACCTAGATTTTTCATACGGTGGACTAAATAGTTCAATTCCTGCGTCATTTTCCAATCTCACAAACCTTGAGATTCTTTATCTTCAGAGCAATAACCTTAGCGGTACAGTGGAGTTTGAAACATTTCGAAACTTACAAAATCTCAATCAACTCGATCTAAGTGGTAATAATATGGAATTTCTCACTGATTCCTTGATTATGAATGCAACAGTTCCACAGTTCAAGGTTCTAGGATTGACTAGATGCAACTTGACACGGTTCCCATATTTCTTAAGATATCAAAAAAATTTGCAGAATTTGTACCTTCATCAAAACAAAATCCATGGCCAAGTACCGAAATGGATGTGGAACATGAGCACCGAAAGTTTGAAGTACTTCGACCTTGACCATAACTTCCTTTCAGGCTTTGAGCAACTTCCAGTTGTGCTTCCTTGGATTAACTTGCGATTTTTAAGTCTTTCGTCCAACATGTTCCATGGCCCACTCCCAATACCGGCAGCATCCATCTTAGGTTATGAAGTTCAGGATAACAATTTTGCTGGAGAAATTCCCCTAGGGATCTGCAATATGAGTTCTCTTTTGGCCCTTGATGCGTCTGATAACAACTTCAGTGGCATGATTCCGCAGTGTTTCGGAAACTTTAGCGACCATCTGGCACTTTTGCTGCTTGGTAATAACTCGTTTCATGGCACTCTTCCTCAAACATACACCAACAAAAGCAACTTGAGGATGCTTGATGTGAGTCAAAATCAATTGCAAGGGCAACTACCGAGGTCATTGGCTAATTGTCTGATGCTTGAGACTTTGATTCTGTCAAACAATAACTTGAGTGATGTTTTCCCCTTTTGGTTGGCAACTCTTCCGGATTTAAAACTTTTGGCAATGCGGCATAATGGGTTCCATGGAGTGTTAGGAAAGCCTGAAAACAATCAACGGTTTCCGAAGTTGCGTCTTTTAGATATTTCTTATAACAATTTCACTGGCCGATTTCTAGCTGAGTACATCTTCTCTGAGTATGCCATGAGACCAAATATGATTGTCAGCCAGACAACATACAGAGGGGCAGACATCAAATACCAATCTGGTAATGGTATCATCACTCTGTATTATGGTGCCACGATTACAATAACGAGTAAAGGTCTGGACAGATACTATCCAAAGATTCAAGAAGCCCTTGCAGTCATTGATATCTCATGCAACAAATTTGAAGGGAAGATTGATGAATGGATTGGGAATCTAAAAGCGCTTCGCTTGCTGAATGTTTCCAATAACCTTCTCACCGGTGGGATCCCATCATCTTTGGGGAATTTAACAGATCTCGAGTCATTGGACATTTCGAATAACAAGCTCTTGGGAGAGATCCCCCAACAACTGGCGCAACTGACATTCCTTGCAGAATTCAATGTCTCTCACAACAATCTCACAGGTCCTATACCAAGTGGAACCCAACTCAGGGGGTTTAATGTCACTGCTTATGAGGGAAACTCCGCACTGTGTGGAGATCCATTGCCAAAGAAATGTGGGAAGTCTAATACCCCAGCTCAACTGCCACCTTCTGAAACAGAAGACAACAGTTCAGGGTCCGGAATTGAATTTGATTGGATTTTTGTGTTGGCCGGATACGGAAGTGGGTTGGTTATAGGAGTGGTACTTGCGAATGTAGCAATCGCACGGAGGCCTGTGTTATTTCTTCGGATAGTTGGAACATTGATCAGACTAATAGAAAAGATCACAAGCTGGAAGAGGTCTGGACGCTATATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

957

Amino Acids

106.12

Weight (kDa)

6.6

Isoelectric Point (pI)

34.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 83 1.6e-06 Leucine rich repeat N-terminal domain
LRR_14 PF23598 104 - 183 7e-06 Leucine-rich repeat region
LRR_14 PF23598 193 - 300 1.1e-07 Leucine-rich repeat region
LRR_14 PF23598 293 - 501 9.2e-13 Leucine-rich repeat region
LRR_14 PF23598 760 - 841 5.5e-06 Leucine-rich repeat region
LRR_8 PF13855 762 - 820 3.2e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2079
AccB1I GGYRCC 1 cut(s) 2222
AccB7I CCANNNNNTGG 2 cut(s) 649, 2482
AccIII TCCGGA 2 cut(s) 1972, 2693
AciI CCGC 5 cut(s) 300, 1212, 1733, 1996, 2598
AclWI GGATC 7 cut(s) 552, 565, 1676, 2392, 2405, 2464, 2606
AcoI YGGCCR 4 cut(s) 651, 1435, 2092, 2724
AcuI CTGAAG 4 cut(s) 329, 1081, 1178, 1702
AdeI CACNNNGTG 1 cut(s) 2606
AfaI GTAC 8 cut(s) 64, 1051, 1216, 1412, 1443, 1484, 2111, 2760
AfeI AGCGCT 1 cut(s) 2355
AfiI CCNNNNNNNGG 6 cut(s) 530, 649, 1603, 2482, 2562, 2563
AflII CTTAAG 1 cut(s) 1381
AflIII ACRYGT 1 cut(s) 1578
AgeI ACCGGT 1 cut(s) 2390
AhlI ACTAGT 1 cut(s) 1105
AjuI GAANNNNNNNTTGG 2 cut(s) 991, 1023
AluBI AGCT 9 cut(s) 129, 197, 219, 321, 958, 2105, 2458, 2651, 2847
AluI AGCT 9 cut(s) 129, 197, 219, 321, 958, 2105, 2458, 2651, 2847
Alw21I GWGCWC 1 cut(s) 1469
Alw26I GTCTC 7 cut(s) 614, 699, 753, 815, 1904, 2128, 2521
AlwI GGATC 7 cut(s) 552, 565, 1676, 2392, 2405, 2464, 2606
AlwNI CAGNNNCTG 1 cut(s) 222
Ama87I CYCGRG 1 cut(s) 2429
Aor13HI TCCGGA 2 cut(s) 1972, 2693
Aor51HI AGCGCT 1 cut(s) 2355
AoxI GGCC 7 cut(s) 651, 1435, 1588, 1692, 2092, 2724, 2786
ApeKI GCWGC 6 cut(s) 219, 222, 318, 902, 1607, 1774
ArsI GACNNNNNNTTYG 5 cut(s) 167, 199, 793, 825, 2853
AseI ATTAAT 1 cut(s) 876
AsiGI ACCGGT 1 cut(s) 2390
Asp700I GAANNNNTTC 3 cut(s) 603, 1233, 1484
AspA2I CCTAGG 1 cut(s) 1663
AspLEI GCGC 2 cut(s) 2356, 2488
AspS9I GGNCC 7 cut(s) 995, 1070, 1075, 1589, 1693, 2537, 2691
AsuHPI GGTGA 3 cut(s) 332, 412, 2380
AsuII TTCGAA 2 cut(s) 1237, 2447
AvaI CYCGRG 1 cut(s) 2429
AvaII GGWCC 5 cut(s) 995, 1070, 1075, 2537, 2691
AvrII CCTAGG 1 cut(s) 1663
BaeI ACNNNNGTAYC 2 cut(s) 2722, 2755
BalI TGGCCA 2 cut(s) 653, 1437
BamHI GGATCC 2 cut(s) 557, 2397
BanI GGYRCC 1 cut(s) 2222
BbsI GAAGAC 1 cut(s) 2682
Bbv12I GWGCWC 1 cut(s) 1469
BbvI GCAGC 6 cut(s) 206, 209, 330, 889, 1619, 1761
BciVI GTATCC 1 cut(s) 2723
BclI TGATCA 1 cut(s) 2820
BcoDI GTCTC 7 cut(s) 614, 699, 753, 815, 1904, 2128, 2521
BcuI ACTAGT 1 cut(s) 1105
BfoI RGCGCY 1 cut(s) 2357
BfrI CTTAAG 1 cut(s) 1381
BfuI GTATCC 1 cut(s) 2723
BglII AGATCT 2 cut(s) 769, 2425
BisI GCNGC 8 cut(s) 220, 223, 301, 319, 903, 1608, 1775, 1997
BlnI CCTAGG 1 cut(s) 1663
BlsI GCNGC 8 cut(s) 221, 224, 302, 320, 904, 1609, 1776, 1998
BmcAI AGTACT 2 cut(s) 64, 1484
Bme18I GGWCC 5 cut(s) 995, 1070, 1075, 2537, 2691
BmeT110I CYCGRG 1 cut(s) 2429
BmgT120I GGNCC 7 cut(s) 995, 1070, 1075, 1589, 1693, 2537, 2691
BmiI GGNNCC 9 cut(s) 559, 996, 1077, 1370, 2009, 2224, 2399, 2554, 2692
BmsI GCATC 5 cut(s) 1343, 1619, 1690, 1830, 1893
BpiI GAAGAC 1 cut(s) 2682
BplI GAGNNNNNCTC 4 cut(s) 86, 118, 2579, 2611
BpmI CTGGAG 2 cut(s) 298, 1671
Bpu10I CCTNAGC 1 cut(s) 1208
Bpu14I TTCGAA 2 cut(s) 1237, 2447
BpuEI CTTGAG 5 cut(s) 183, 1199, 1855, 1928, 1957
BsaI GGTCTC 1 cut(s) 2128
BsaJI CCNNGG 7 cut(s) 648, 1432, 1541, 1585, 1663, 1880, 2011
BsaWI WCCGGW 4 cut(s) 1072, 1972, 2390, 2693
Bsc4I CCNNNNNNNGG 6 cut(s) 530, 649, 1603, 2482, 2562, 2563
Bse118I RCCGGY 2 cut(s) 1603, 2390
Bse1I ACTGG 6 cut(s) 60, 591, 1072, 1529, 2095, 2487
Bse3DI GCAATG 3 cut(s) 13, 1998, 2615
BseAI TCCGGA 2 cut(s) 1972, 2693
BseDI CCNNGG 7 cut(s) 648, 1432, 1541, 1585, 1663, 1880, 2011
BseGI GGATG 5 cut(s) 238, 901, 1458, 1610, 1845
BseLI CCNNNNNNNGG 6 cut(s) 530, 649, 1603, 2482, 2562, 2563
BseMI GCAATG 3 cut(s) 13, 1998, 2615
BseMII CTCAG 4 cut(s) 746, 2097, 2112, 2575
BseNI ACTGG 6 cut(s) 60, 591, 1072, 1529, 2095, 2487
BseRI GAGGAG 1 cut(s) 488
BseXI GCAGC 6 cut(s) 206, 209, 330, 889, 1619, 1761
BseYI CCCAGC 1 cut(s) 2647
BsgI GTGCAG 1 cut(s) 208
BshFI GGCC 7 cut(s) 653, 1437, 1590, 1694, 2094, 2726, 2788
BshNI GGYRCC 1 cut(s) 2222
BshTI ACCGGT 1 cut(s) 2390
BsiHKAI GWGCWC 1 cut(s) 1469
BsiHKCI CYCGRG 1 cut(s) 2429
BsiSI CCGG 6 cut(s) 1073, 1604, 1973, 2391, 2694, 2727
BslFI GGGAC 2 cut(s) 446, 1061
BslI CCNNNNNNNGG 6 cut(s) 530, 649, 1603, 2482, 2562, 2563
BsmAI GTCTC 7 cut(s) 614, 699, 753, 815, 1904, 2128, 2521
BsmBI CGTCTC 2 cut(s) 614, 815
BsmFI GGGAC 2 cut(s) 446, 1061
BsmI GAATGC 2 cut(s) 104, 1318
BsnI GGCC 7 cut(s) 653, 1437, 1590, 1694, 2094, 2726, 2788
Bso31I GGTCTC 1 cut(s) 2128
BsoBI CYCGRG 1 cut(s) 2429
Bsp119I TTCGAA 2 cut(s) 1237, 2447
Bsp1286I GDGCHC 1 cut(s) 1469
Bsp13I TCCGGA 2 cut(s) 1972, 2693
Bsp1407I TGTACA 1 cut(s) 1049
Bsp19I CCATGG 4 cut(s) 648, 1432, 1585, 2011
BspACI CCGC 5 cut(s) 300, 1212, 1733, 1996, 2598
BspANI GGCC 7 cut(s) 653, 1437, 1590, 1694, 2094, 2726, 2788
BspCNI CTCAG 4 cut(s) 747, 2098, 2113, 2574
BspEI TCCGGA 2 cut(s) 1972, 2693
BspLI GGNNCC 9 cut(s) 559, 996, 1077, 1370, 2009, 2224, 2399, 2554, 2692
BspPI GGATC 7 cut(s) 552, 565, 1676, 2392, 2405, 2464, 2606
BspT104I TTCGAA 2 cut(s) 1237, 2447
BspT107I GGYRCC 1 cut(s) 2222
BspTI CTTAAG 1 cut(s) 1381
BspTNI GGTCTC 1 cut(s) 2128
BsrDI GCAATG 3 cut(s) 13, 1998, 2615
BsrFI RCCGGY 2 cut(s) 1603, 2390
BsrGI TGTACA 1 cut(s) 1049
BsrI ACTGG 6 cut(s) 60, 591, 1072, 1529, 2095, 2487
BssAI RCCGGY 2 cut(s) 1603, 2390
BssECI CCNNGG 7 cut(s) 648, 1432, 1541, 1585, 1663, 1880, 2011
BssT1I CCWWGG 6 cut(s) 648, 1432, 1541, 1585, 1663, 2011
Bst4CI ACNGT 9 cut(s) 480, 1130, 1219, 1321, 1329, 1368, 2046, 2604, 2684
Bst6I CTCTTC 4 cut(s) 332, 1809, 1974, 2846
BstAFI CTTAAG 1 cut(s) 1381
BstAUI TGTACA 1 cut(s) 1049
BstBI TTCGAA 2 cut(s) 1237, 2447
BstC8I GCNNGC 2 cut(s) 907, 2363
BstDEI CTNAG 9 cut(s) 281, 755, 950, 1208, 1268, 1618, 2106, 2121, 2561
BstDSI CCRYGG 4 cut(s) 648, 1432, 1585, 2011
BstF5I GGATG 5 cut(s) 238, 901, 1458, 1610, 1845
BstH2I RGCGCY 1 cut(s) 2357
BstHHI GCGC 2 cut(s) 2356, 2488
BstMAI GTCTC 7 cut(s) 614, 699, 753, 815, 1904, 2128, 2521
BstMWI GCNNNNNNNGC 3 cut(s) 1700, 2362, 2771
BstNSI RCATGY 2 cut(s) 909, 1582
BstV1I GCAGC 6 cut(s) 206, 209, 330, 889, 1619, 1761
BstV2I GAAGAC 1 cut(s) 2682
BstX2I RGATCY 7 cut(s) 557, 769, 1668, 2397, 2425, 2469, 2611
BstYI RGATCY 7 cut(s) 557, 769, 1668, 2397, 2425, 2469, 2611
BsuI GTATCC 1 cut(s) 2723
BsuRI GGCC 7 cut(s) 653, 1437, 1590, 1694, 2094, 2726, 2788
BtgI CCRYGG 4 cut(s) 648, 1432, 1585, 2011
BtsCI GGATG 5 cut(s) 238, 901, 1458, 1610, 1845
BtsI GCAGTG 2 cut(s) 1742, 2577
BtsIMutI CAGTG 8 cut(s) 695, 1224, 1293, 1726, 1742, 2088, 2577, 2600
Cac8I GCNNGC 2 cut(s) 907, 2363
CaiI CAGNNNCTG 1 cut(s) 222
CfoI GCGC 2 cut(s) 2356, 2488
Cfr10I RCCGGY 2 cut(s) 1603, 2390
Cfr13I GGNCC 7 cut(s) 995, 1070, 1075, 1589, 1693, 2537, 2691
CseI GACGC 3 cut(s) 1143, 1692, 2048
Csp6I GTAC 8 cut(s) 63, 1050, 1215, 1411, 1442, 1483, 2110, 2759
CspAI ACCGGT 1 cut(s) 2390
CspCI CAANNNNNGTGG 2 cut(s) 1702, 1737
CviQI GTAC 8 cut(s) 63, 1050, 1215, 1411, 1442, 1483, 2110, 2759
DdeI CTNAG 9 cut(s) 281, 755, 950, 1208, 1268, 1618, 2106, 2121, 2561
DraI TTTAAA 1 cut(s) 1980
DraIII CACNNNGTG 1 cut(s) 2606
EaeI YGGCCR 4 cut(s) 651, 1435, 2092, 2724
Eam1104I CTCTTC 4 cut(s) 332, 1809, 1974, 2846
EarI CTCTTC 4 cut(s) 332, 1809, 1974, 2846
Eco130I CCWWGG 6 cut(s) 648, 1432, 1541, 1585, 1663, 2011
Eco147I AGGCCT 1 cut(s) 2788
Eco31I GGTCTC 1 cut(s) 2128
Eco32I GATATC 2 cut(s) 1388, 2299
Eco47I GGWCC 5 cut(s) 995, 1070, 1075, 2537, 2691
Eco47III AGCGCT 1 cut(s) 2355
Eco57I CTGAAG 4 cut(s) 329, 1081, 1178, 1702
Eco88I CYCGRG 1 cut(s) 2429
EcoO109I RGGNCCY 1 cut(s) 2537
EcoRI GAATTC 1 cut(s) 2507
EcoRV GATATC 2 cut(s) 1388, 2299
EcoT14I CCWWGG 6 cut(s) 648, 1432, 1541, 1585, 1663, 2011
ErhI CCWWGG 6 cut(s) 648, 1432, 1541, 1585, 1663, 2011
Esp3I CGTCTC 2 cut(s) 614, 815
FalI AAGNNNNNCTT 4 cut(s) 113, 145, 2268, 2300
FaqI GGGAC 2 cut(s) 446, 1061
FbaI TGATCA 1 cut(s) 2820
Fnu4HI GCNGC 8 cut(s) 220, 223, 301, 319, 903, 1608, 1775, 1997
FokI GGATG 5 cut(s) 245, 908, 1465, 1597, 1852
Fsp4HI GCNGC 8 cut(s) 220, 223, 301, 319, 903, 1608, 1775, 1997
GlaI GCGC 2 cut(s) 2355, 2487
GluI GCNGC 8 cut(s) 220, 223, 301, 319, 903, 1608, 1775, 1997
GsaI CCCAGC 1 cut(s) 2651
GsuI CTGGAG 2 cut(s) 298, 1671
HaeII RGCGCY 1 cut(s) 2357
HaeIII GGCC 7 cut(s) 653, 1437, 1590, 1694, 2094, 2726, 2788
HapII CCGG 6 cut(s) 1073, 1604, 1973, 2391, 2694, 2727
HgaI GACGC 3 cut(s) 1143, 1692, 2048
HhaI GCGC 2 cut(s) 2356, 2488
Hin6I GCGC 2 cut(s) 2354, 2486
HinP1I GCGC 2 cut(s) 2354, 2486
HpaII CCGG 6 cut(s) 1073, 1604, 1973, 2391, 2694, 2727
HphI GGTGA 3 cut(s) 332, 412, 2380
Hpy166II GTNNAC 3 cut(s) 340, 1111, 1133
Hpy8I GTNNAC 3 cut(s) 340, 1111, 1133
Hpy99I CGWCG 1 cut(s) 827
HpyAV CCTTC 8 cut(s) 353, 402, 534, 867, 1424, 2312, 2393, 2673
HpyCH4III ACNGT 9 cut(s) 480, 1130, 1219, 1321, 1329, 1368, 2046, 2604, 2684
HpyCH4IV ACGT 1 cut(s) 825
HpyF10VI GCNNNNNNNGC 3 cut(s) 1700, 2362, 2771
HpyF3I CTNAG 9 cut(s) 281, 755, 950, 1208, 1268, 1618, 2106, 2121, 2561
HpySE526I ACGT 1 cut(s) 825
HspAI GCGC 2 cut(s) 2354, 2486
Kpn2I TCCGGA 2 cut(s) 1972, 2693
Ksp22I TGATCA 1 cut(s) 2820
LmnI GCTCC 1 cut(s) 326
Lsp1109I GCAGC 6 cut(s) 206, 209, 330, 889, 1619, 1761
LweI GCATC 5 cut(s) 1343, 1619, 1690, 1830, 1893
MaeII ACGT 1 cut(s) 825
MaeIII GTNAC 6 cut(s) 111, 245, 492, 614, 1091, 2575
MfeI CAATTG 1 cut(s) 1862
MflI RGATCY 7 cut(s) 557, 769, 1668, 2397, 2425, 2469, 2611
MhlI GDGCHC 1 cut(s) 1469
MlsI TGGCCA 2 cut(s) 653, 1437
MluNI TGGCCA 2 cut(s) 653, 1437
MlyI GAGTC 2 cut(s) 1861, 2441
MmeI TCCRAC 3 cut(s) 873, 1599, 2791
Mox20I TGGCCA 2 cut(s) 653, 1437
MroI TCCGGA 2 cut(s) 1972, 2693
MroXI GAANNNNTTC 3 cut(s) 603, 1233, 1484
MscI TGGCCA 2 cut(s) 653, 1437
Msp20I TGGCCA 2 cut(s) 653, 1437
MspA1I CMGCKG 1 cut(s) 219
MspCI CTTAAG 1 cut(s) 1381
MspI CCGG 6 cut(s) 1073, 1604, 1973, 2391, 2694, 2727
MunI CAATTG 1 cut(s) 1862
Mva1269I GAATGC 2 cut(s) 104, 1318
MwoI GCNNNNNNNGC 3 cut(s) 1700, 2362, 2771
NcoI CCATGG 4 cut(s) 648, 1432, 1585, 2011
NlaIV GGNNCC 9 cut(s) 559, 996, 1077, 1370, 2009, 2224, 2399, 2554, 2692
NmuCI GTSAC 3 cut(s) 245, 492, 2575
NspI RCATGY 2 cut(s) 909, 1582
NspV TTCGAA 2 cut(s) 1237, 2447
PaeI GCATGC 1 cut(s) 909
PaeR7I CTCGAG 1 cut(s) 2429
PceI AGGCCT 1 cut(s) 2788
PciI ACATGT 1 cut(s) 1578
PctI GAATGC 2 cut(s) 104, 1318
PdmI GAANNNNTTC 3 cut(s) 603, 1233, 1484
PfeI GAWTC 9 cut(s) 406, 928, 1007, 1183, 1298, 1729, 1918, 2272, 2344
PflMI CCANNNNNTGG 2 cut(s) 649, 2482
PinAI ACCGGT 1 cut(s) 2390
PkrI GCNGC 8 cut(s) 221, 224, 302, 320, 904, 1609, 1776, 1998
PleI GAGTC 2 cut(s) 1860, 2440
PpsI GAGTC 2 cut(s) 1860, 2440
PpuMI RGGWCCY 1 cut(s) 2537
PscI ACATGT 1 cut(s) 1578
PshBI ATTAAT 1 cut(s) 876
PsiI TTATAA 1 cut(s) 2079
Psp5II RGGWCCY 1 cut(s) 2537
PspFI CCCAGC 1 cut(s) 2647
PspN4I GGNNCC 9 cut(s) 559, 996, 1077, 1370, 2009, 2224, 2399, 2554, 2692
PspPI GGNCC 7 cut(s) 995, 1070, 1075, 1589, 1693, 2537, 2691
PspPPI RGGWCCY 1 cut(s) 2537
PstNI CAGNNNCTG 1 cut(s) 222
PsuI RGATCY 7 cut(s) 557, 769, 1668, 2397, 2425, 2469, 2611
PvuII CAGCTG 1 cut(s) 219
RsaI GTAC 8 cut(s) 64, 1051, 1216, 1412, 1443, 1484, 2111, 2760
RsaNI GTAC 8 cut(s) 63, 1050, 1215, 1411, 1442, 1483, 2110, 2759
SatI GCNGC 8 cut(s) 220, 223, 301, 319, 903, 1608, 1775, 1997
Sau96I GGNCC 7 cut(s) 995, 1070, 1075, 1589, 1693, 2537, 2691
ScaI AGTACT 2 cut(s) 64, 1484
SchI GAGTC 2 cut(s) 1861, 2441
SduI GDGCHC 1 cut(s) 1469
SfaNI GCATC 5 cut(s) 1343, 1619, 1690, 1830, 1893
Sfr274I CTCGAG 1 cut(s) 2429
SfuI TTCGAA 2 cut(s) 1237, 2447
SgrAI CRCCGGYG 1 cut(s) 2390
SinI GGWCC 5 cut(s) 995, 1070, 1075, 2537, 2691
SlaI CTCGAG 1 cut(s) 2429
SmlI CTYRAG 7 cut(s) 198, 1178, 1381, 1834, 1907, 1936, 2429
SmoI CTYRAG 7 cut(s) 198, 1178, 1381, 1834, 1907, 1936, 2429
SpeI ACTAGT 1 cut(s) 1105
SphI GCATGC 1 cut(s) 909
SseBI AGGCCT 1 cut(s) 2788
SsiI CCGC 5 cut(s) 300, 1212, 1733, 1996, 2598
StuI AGGCCT 1 cut(s) 2788
StyI CCWWGG 6 cut(s) 648, 1432, 1541, 1585, 1663, 2011
TaaI ACNGT 9 cut(s) 480, 1130, 1219, 1321, 1329, 1368, 2046, 2604, 2684
TaiI ACGT 1 cut(s) 828
TaqI TCGA 9 cut(s) 429, 632, 678, 822, 1237, 1263, 1488, 2430, 2447
TatI WGTACW 4 cut(s) 62, 1049, 1482, 2109
TauI GCSGC 2 cut(s) 303, 1999
TfiI GAWTC 9 cut(s) 406, 928, 1007, 1183, 1298, 1729, 1918, 2272, 2344
TscAI CASTG 8 cut(s) 695, 1224, 1300, 1726, 1742, 2095, 2584, 2607
TseFI GTSAC 3 cut(s) 245, 492, 2575
TseI GCWGC 6 cut(s) 219, 222, 318, 902, 1607, 1774
Tsp45I GTSAC 3 cut(s) 245, 492, 2575
TspDTI ATGAA 7 cut(s) 818, 1113, 1325, 1406, 1641, 1784, 2346
TspGWI ACGGA 3 cut(s) 602, 2748, 2797
TspRI CASTG 8 cut(s) 695, 1224, 1300, 1726, 1742, 2095, 2584, 2607
Van91I CCANNNNNTGG 2 cut(s) 649, 2482
Vha464I CTTAAG 1 cut(s) 1381
VpaK11BI GGWCC 5 cut(s) 995, 1070, 1075, 2537, 2691
VspI ATTAAT 1 cut(s) 876
XbaI TCTAGA 2 cut(s) 595, 967
XceI RCATGY 2 cut(s) 909, 1582
XcmI CCANNNNNNNNNTGG 2 cut(s) 773, 2195
XhoI CTCGAG 1 cut(s) 2429
XmaJI CCTAGG 1 cut(s) 1663
XmnI GAANNNNTTC 3 cut(s) 603, 1233, 1484
ZrmI AGTACT 2 cut(s) 64, 1484
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.