RLG00000020896

Leucine rich repeat N-terminal domain

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
69879061 .. 69882037
2977 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020896

Sequence Viewer

Length: 2868 bp
ATGGGATTGCCAAGGTGTTATTTTTATGCTGTGCAATGCCTTATTTTTCTGTTGCTCAAAGCTTCCCAATGTTCTTCATTTGTGCAGACAATTGGTCATGCAGATGAGTGCTCTGCCTTGATGCAATTCAAGCAAAGCTTTACAACAAGCAAGTCTGCATCTTTAGATCCTTTCGCTTATCCGAAGGTTGCATCATGGACGCAAGAAAGGAAGAGGAGGAATTGCTGCTCATGGGATGGTGTGGAGTGCAATGAGGAGACTGGCTATGTTATTGGCCTTAACCTCAACAGCAGCTGCCTCTATGGTTCTCTCAACTCCAGCAGCAGCCTTTTCCAACTTTCCTCATTCTCTGGCCAAATTCCATCAGAAATTTCGTACCTTTCCAAGTTGTCTACCCTTGATCTTTCTGCTATTAGCTTTTTGGATATGACATTCGATTATGATCATTTTTCATCTTACAAGATTTTGGAACTGACAAATGCCAACCTCAGAAGTATAGTTCAAAATCTAACCAATATACAACAACTTCATCTTAATAAGGTATACATACTCTCCACTCTACCCGATATCTTTGCAAATGCAACTTCTCTCAAAGCTCTGTATCTTCAAAGCTGTGGTTTGTCTGGAGAATTCCCAGTAGGCATTTTTCAGCTACCAAACTTAGAAGTTCTTGATCTGATGTATAATGAAGACTTAACTGGTTACTTTCCTGAATTTAACAAGAGTAGCCCCTTCAAGAAACTGAATGTTGCGAGGACAAATTTCTCTGGTCATATACCTGCTTCAATTGGAGACCTAAGCTCCTTAGAGTACTTGAACCTCGCGTTGTGTAATTTTTATCCTCATATTCCATCTTCACTTGGAAACCTTACACAGCTCAGTTACCTTAGCCTTTCTTTCTTTTTCGACCATAGTTTTACTTACTACGATGTTTCAAGAAACAGTTTTAGTGGCCAAATTTCTGAGTCCTGGTCTTGGGTTGGAAAGCTAACCAAACTCTACCACTTGAGCCTTGCCTATACCTACTTAAAGGGAGAATTCCCAAGTTTTGTTGCGAACTTGACTCAAATGGAAGAGTTAGACTTGGCCTATAACCAAATCACAGGTCAAATCCCATCTTGGCTTGCCAACTTGACCAAATTAACTGCTCCATACTTTCCATTTAACAATTTGCAAGAAGCAATTCCAAGGTCATTTTTCCAGCTTACAAACCTTCAGTATATTGACCTTTCTTCCAATAACTTGAGTGGAACAGTTGAGTTGGATGAATTTTTCAAGCTCAAAATGTTAACAGTGCTTCGACTTTCGTTCAACAAATTATCTGTGCACATCAAAACCAGTTTGACTGCTACTTCTCCAAAGTTTGAAGCTCTAGCATTGGCGTCATGCAACTTAACAGGGTTTCCAGATTTTTTACATGATAATAGTAAATTGGTGGAGCTAGACCTTTCTGATAACAACATTCATGGCCAAATACCAAGATGGATGTGGAACTCAACTGGTGAATCTCTGTGGTATCTGAACCTCTCCCACAACTCTCTAACAGGATTTGAGCAAAATCCAGTCATTCTTCCATGGAAGAATCTGCATCTTTTAGAGCTTGGATCTAACAGGTTACAAGGACAATTGCCGATTCCACCCCTATCAATCCAATTTTATTCTGTGCCAAACAATGGTTATACTGGAGGGGTTTCACAATCTTTCTGCAACTTGAAAGATCTGTTCGTTCTTGATTTGTCCAACAACAACCTAAGTGGCATGCTTCCACAATGTTTAGGCAGCTCCAGTGCTTTTGAGATTCTGAAGCTCCGCAACAATTCTTTTCATGGTGATATTCCTGATCAAATGTGTCCAACCGGACAGGGTTCACTAACGATGGTTGATATGAGCTATAATCAGCTACGGGGAAAGCTACCCAGATCAATGGCCAATTGCACTCAGTTAGAGTTTCTTGATTTCGGAAACAATCACATTAGTGACAGCTTCCCATCATGGTTAGGGGCACTTCCGGTACTAAGGGTACTCATTCTGGGGACTAATGGATTTCATGGCACTATTGGCAAACCTGCAACCAACCATGAGTTCCCAAACCTCTGCATTATTGACCTATCCAACAATGGTTTCTCAAGTTGGTTGCCTTCTGATTACTTAGGGAGCTTGAATTGCATGAAGAAATCTGTTGACCAAGATGAAGTGAAGACCTATTTTCAAGACACCATAACGGTCGCCACGTACACAATCTACCATTATGATTACTCAATGATCATCTTTGGCAAAGGTGTAGAGTTGAAGTATTTGAAGACACCTTACCTTCTCAGGTTCATAGATCTCTCAAACAATAGATTTGAAGGCGTCATTCCTGGTACTATTGGGAATCTAAGAGGGCTTCATTTGCTTAATCTTTCCAACAACACTCTCATTGGTCACATCCCCCCATCTTTAGGGAACTTGTCTGCCCTTGAATCCTTGGATCTCTCTCAAAATCAACTCTCAGGAGAGATCCCCGGCACTTTAGTTGAACTCACTTTCCTTGCATACTTTAATGTATCCCAAAATCACCTTTCAGGCCCTATCCCACATGGGCAACAATTTGATACATTCCAAGAGGATCTGTACAAAGGAAACTCAGGTTTGTGTGGGGAGCCTTTGTTAAAGAAATGTGAAGGTTCTGATAGCTCAACGTCACTACCATCTTCTGAAGAAGATGAAGACTCCAGGATTCAGGTTGAATTAGATTGGTTTGTGGTTCTGCTGGGAGTTGTAAGTGGGCTAGTAGTTGGAGGGGTTGCCGGGAACACTTTGGGAAACAAGAAGCATGAATGGTTTGTGAAGACATTCGGCAAGAGGAGGAGTTCTCTAGCGAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

956

Amino Acids

106.53

Weight (kDa)

5.56

Isoelectric Point (pI)

41.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 34 - 84 4.5e-07 Leucine rich repeat N-terminal domain
LRR_14 PF23598 324 - 511 1.1e-10 Leucine-rich repeat region
LRR_8 PF13855 388 - 440 3.5e-08 Leucine rich repeat
LRR_14 PF23598 753 - 852 1.3e-07 Leucine-rich repeat region
LRR_8 PF13855 772 - 830 1.3e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 787, 2074
AccB7I CCANNNNNTGG 1 cut(s) 1673
AccI GTMKAC 2 cut(s) 392, 543
AccII CGCG 1 cut(s) 824
AciI CCGC 1 cut(s) 1810
AclWI GGATC 5 cut(s) 161, 1612, 2478, 2494, 2616
AcoI YGGCCR 4 cut(s) 352, 952, 1468, 1926
AcsI RAATTY 8 cut(s) 357, 369, 629, 713, 760, 957, 1037, 1268
AcuI CTGAAG 3 cut(s) 1199, 1823, 2718
AcyI GRCGYC 2 cut(s) 1382, 2352
AfaI GTAC 7 cut(s) 377, 812, 2013, 2022, 2234, 2365, 2615
AfiI CCNNNNNNNGG 3 cut(s) 975, 1673, 2441
AhdI GACNNNNNGTC 1 cut(s) 93
AjnI CCWGG 3 cut(s) 968, 2359, 2714
AjuI GAANNNNNNNTTGG 4 cut(s) 2066, 2098, 2105, 2137
AleI CACNNNNGTG 1 cut(s) 1974
AloI GAACNNNNNNTCC 2 cut(s) 2511, 2543
Alw21I GWGCWC 2 cut(s) 113, 1329
Alw26I GTCTC 2 cut(s) 251, 786
Alw44I GTGCAC 1 cut(s) 1325
AlwI GGATC 5 cut(s) 161, 1612, 2478, 2494, 2616
AlwNI CAGNNNCTG 1 cut(s) 294
AoxI GGCC 7 cut(s) 274, 352, 952, 1086, 1468, 1926, 2566
ApaLI GTGCAC 1 cut(s) 1325
ApeKI GCWGC 6 cut(s) 225, 291, 294, 321, 324, 1779
ApoI RAATTY 8 cut(s) 357, 369, 629, 713, 760, 957, 1037, 1268
ArsI GACNNNNNNTTYG 2 cut(s) 1090, 1122
Asp700I GAANNNNTTC 2 cut(s) 1182, 2834
AspS9I GGNCC 1 cut(s) 2567
AsuC2I CCSGG 2 cut(s) 2505, 2791
AsuHPI GGTGA 3 cut(s) 1514, 1841, 2549
BaeGI GKGCMC 2 cut(s) 1329, 2005
BalI TGGCCA 4 cut(s) 354, 954, 1470, 1928
BarI GAAGNNNNNNTAC 2 cut(s) 2291, 2323
BbsI GAAGAC 5 cut(s) 696, 2204, 2306, 2715, 2837
Bbv12I GWGCWC 2 cut(s) 113, 1329
BbvI GCAGC 6 cut(s) 212, 281, 303, 333, 336, 1791
BccI CCATC 9 cut(s) 230, 370, 859, 1123, 1476, 1870, 1996, 2443, 2698
BcgI CGANNNNNNTGC 2 cut(s) 554, 588
BciT130I CCWGG 3 cut(s) 970, 2361, 2716
BciVI GTATCC 1 cut(s) 2557
BclI TGATCA 3 cut(s) 442, 1840, 2262
BcnI CCSGG 2 cut(s) 2505, 2791
BcoDI GTCTC 2 cut(s) 251, 786
BfaI CTAG 4 cut(s) 1373, 1442, 2771, 2858
BfuAI ACCTGC 2 cut(s) 787, 2074
BfuI GTATCC 1 cut(s) 2557
BglII AGATCT 2 cut(s) 1717, 2326
BisI GCNGC 6 cut(s) 226, 292, 295, 322, 325, 1780
BlsI GCNGC 6 cut(s) 227, 293, 296, 323, 326, 1781
BmcAI AGTACT 1 cut(s) 812
Bme1390I CCNGG 5 cut(s) 970, 2361, 2505, 2716, 2791
BmeRI GACNNNNNGTC 1 cut(s) 93
BmgT120I GGNCC 1 cut(s) 2567
BmiI GGNNCC 1 cut(s) 2643
BmrFI CCNGG 5 cut(s) 970, 2361, 2505, 2716, 2791
BmrI ACTGGG 1 cut(s) 629
BmsI GCATC 4 cut(s) 111, 167, 200, 1597
BmuI ACTGGG 1 cut(s) 629
BpiI GAAGAC 5 cut(s) 696, 2204, 2306, 2715, 2837
BplI GAGNNNNNCTC 1 cut(s) 2839
BpmI CTGGAG 5 cut(s) 301, 645, 1704, 1768, 2698
Bpu10I CCTNAGC 2 cut(s) 797, 887
BpuEI CTTGAG 3 cut(s) 1027, 1264, 2110
BpuMI CCSGG 2 cut(s) 2505, 2791
BsaAI YACGTR 1 cut(s) 2232
BsaBI GATNNNNATC 1 cut(s) 441
BsaHI GRCGYC 2 cut(s) 1382, 2352
BsaI GGTCTC 1 cut(s) 786
BsaJI CCNNGG 5 cut(s) 11, 1187, 1574, 2466, 2503
BsaWI WCCGGW 2 cut(s) 1856, 2008
BsaXI ACNNNNNCTCC 6 cut(s) 536, 566, 785, 815, 2633, 2663
Bsc4I CCNNNNNNNGG 3 cut(s) 975, 1673, 2441
Bse1I ACTGG 8 cut(s) 265, 635, 703, 1338, 1504, 1562, 1687, 1785
Bse3DI GCAATG 2 cut(s) 41, 256
Bse8I GATNNNNATC 1 cut(s) 441
BseBI CCWGG 3 cut(s) 970, 2361, 2716
BseDI CCNNGG 5 cut(s) 11, 1187, 1574, 2466, 2503
BseGI GGATG 4 cut(s) 241, 1270, 1491, 2427
BseJI GATNNNNATC 1 cut(s) 441
BseLI CCNNNNNNNGG 3 cut(s) 975, 1673, 2441
BseMI GCAATG 2 cut(s) 41, 256
BseMII CTCAG 7 cut(s) 502, 892, 954, 1952, 2329, 2505, 2640
BseNI ACTGG 8 cut(s) 265, 635, 703, 1338, 1504, 1562, 1687, 1785
BseRI GAGGAG 4 cut(s) 229, 269, 2860, 2863
BseSI GKGCMC 2 cut(s) 1329, 2005
BseXI GCAGC 6 cut(s) 212, 281, 303, 333, 336, 1791
BseYI CCCAGC 1 cut(s) 2752
BsgI GTGCAG 1 cut(s) 104
Bsh1236I CGCG 1 cut(s) 824
Bsh1285I CGRYCG 1 cut(s) 2226
BshFI GGCC 7 cut(s) 276, 354, 954, 1088, 1470, 1928, 2568
BsiEI CGRYCG 1 cut(s) 2226
BsiHKAI GWGCWC 2 cut(s) 113, 1329
BsiSI CCGG 4 cut(s) 1857, 2009, 2505, 2790
BslFI GGGAC 1 cut(s) 2047
BslI CCNNNNNNNGG 3 cut(s) 975, 1673, 2441
BsmAI GTCTC 2 cut(s) 251, 786
BsmFI GGGAC 1 cut(s) 2047
BsnI GGCC 7 cut(s) 276, 354, 954, 1088, 1470, 1928, 2568
Bso31I GGTCTC 1 cut(s) 786
Bsp1286I GDGCHC 3 cut(s) 113, 1329, 2005
Bsp1407I TGTACA 1 cut(s) 2613
Bsp19I CCATGG 1 cut(s) 1574
BspACI CCGC 1 cut(s) 1810
BspANI GGCC 7 cut(s) 276, 354, 954, 1088, 1470, 1928, 2568
BspCNI CTCAG 7 cut(s) 501, 891, 955, 1951, 2328, 2504, 2639
BspFNI CGCG 1 cut(s) 824
BspLI GGNNCC 1 cut(s) 2643
BspMI ACCTGC 2 cut(s) 787, 2074
BspPI GGATC 5 cut(s) 161, 1612, 2478, 2494, 2616
BspTNI GGTCTC 1 cut(s) 786
BsrDI GCAATG 2 cut(s) 41, 256
BsrGI TGTACA 1 cut(s) 2613
BsrI ACTGG 8 cut(s) 265, 635, 703, 1338, 1504, 1562, 1687, 1785
BssECI CCNNGG 5 cut(s) 11, 1187, 1574, 2466, 2503
BssNAI GTATAC 1 cut(s) 544
BssNI GRCGYC 2 cut(s) 1382, 2352
BssT1I CCWWGG 4 cut(s) 11, 1187, 1574, 2466
Bst1107I GTATAC 1 cut(s) 544
Bst2UI CCWGG 3 cut(s) 970, 2361, 2716
Bst4CI ACNGT 4 cut(s) 944, 1255, 1294, 2224
Bst6I CTCTTC 2 cut(s) 206, 1068
BstACI GRCGYC 2 cut(s) 1382, 2352
BstAUI TGTACA 1 cut(s) 2613
BstBAI YACGTR 1 cut(s) 2232
BstC8I GCNNGC 2 cut(s) 1125, 1760
BstDSI CCRYGG 1 cut(s) 1574
BstF5I GGATG 4 cut(s) 241, 1270, 1491, 2427
BstFNI CGCG 1 cut(s) 824
BstMAI GTCTC 2 cut(s) 251, 786
BstMCI CGRYCG 1 cut(s) 2226
BstMWI GCNNNNNNNGC 4 cut(s) 130, 2058, 2163, 2392
BstNI CCWGG 3 cut(s) 970, 2361, 2716
BstNSI RCATGY 1 cut(s) 1762
BstSCI CCNGG 5 cut(s) 968, 2359, 2503, 2714, 2789
BstSLI GKGCMC 2 cut(s) 1329, 2005
BstUI CGCG 1 cut(s) 824
BstV1I GCAGC 6 cut(s) 212, 281, 303, 333, 336, 1791
BstV2I GAAGAC 5 cut(s) 696, 2204, 2306, 2715, 2837
BstX2I RGATCY 7 cut(s) 166, 1604, 1717, 2326, 2470, 2499, 2608
BstXI CCANNNNNNTGG 1 cut(s) 1924
BstYI RGATCY 7 cut(s) 166, 1604, 1717, 2326, 2470, 2499, 2608
BstZ17I GTATAC 1 cut(s) 544
BsuI GTATCC 1 cut(s) 2557
BsuRI GGCC 7 cut(s) 276, 354, 954, 1088, 1470, 1928, 2568
BtgI CCRYGG 1 cut(s) 1574
BtsCI GGATG 4 cut(s) 241, 1270, 1491, 2427
BtsIMutI CAGTG 2 cut(s) 1299, 1792
BveI ACCTGC 2 cut(s) 787, 2074
Cac8I GCNNGC 2 cut(s) 1125, 1760
CaiI CAGNNNCTG 1 cut(s) 294
Cfr13I GGNCC 1 cut(s) 2567
CseI GACGC 3 cut(s) 208, 1371, 2341
Csp6I GTAC 7 cut(s) 376, 811, 2012, 2021, 2233, 2364, 2614
CspCI CAANNNNNGTGG 2 cut(s) 1735, 1770
CviQI GTAC 7 cut(s) 376, 811, 2012, 2021, 2233, 2364, 2614
DriI GACNNNNNGTC 1 cut(s) 93
EaeI YGGCCR 4 cut(s) 352, 952, 1468, 1926
Eam1104I CTCTTC 2 cut(s) 206, 1068
Eam1105I GACNNNNNGTC 1 cut(s) 93
EarI CTCTTC 2 cut(s) 206, 1068
Eco130I CCWWGG 4 cut(s) 11, 1187, 1574, 2466
Eco31I GGTCTC 1 cut(s) 786
Eco32I GATATC 1 cut(s) 568
Eco57I CTGAAG 3 cut(s) 1199, 1823, 2718
EcoO109I RGGNCCY 1 cut(s) 2567
EcoRI GAATTC 2 cut(s) 629, 1037
EcoRII CCWGG 3 cut(s) 968, 2359, 2714
EcoRV GATATC 1 cut(s) 568
EcoT14I CCWWGG 4 cut(s) 11, 1187, 1574, 2466
ErhI CCWWGG 4 cut(s) 11, 1187, 1574, 2466
FalI AAGNNNNNCTT 2 cut(s) 122, 154
FaqI GGGAC 1 cut(s) 2047
FbaI TGATCA 3 cut(s) 442, 1840, 2262
FblI GTMKAC 2 cut(s) 392, 543
Fnu4HI GCNGC 6 cut(s) 226, 292, 295, 322, 325, 1780
FokI GGATG 4 cut(s) 248, 1277, 1498, 2414
Fsp4HI GCNGC 6 cut(s) 226, 292, 295, 322, 325, 1780
FspBI CTAG 4 cut(s) 1373, 1442, 2771, 2858
GluI GCNGC 6 cut(s) 226, 292, 295, 322, 325, 1780
GsaI CCCAGC 1 cut(s) 2756
GsuI CTGGAG 5 cut(s) 301, 645, 1704, 1768, 2698
HaeIII GGCC 7 cut(s) 276, 354, 954, 1088, 1470, 1928, 2568
HapII CCGG 4 cut(s) 1857, 2009, 2505, 2790
HgaI GACGC 3 cut(s) 208, 1371, 2341
Hin1I GRCGYC 2 cut(s) 1382, 2352
HincII GTYRAC 2 cut(s) 1290, 2182
HindII GTYRAC 2 cut(s) 1290, 2182
HindIII AAGCTT 2 cut(s) 60, 136
HpaI GTTAAC 1 cut(s) 1290
HpaII CCGG 4 cut(s) 1857, 2009, 2505, 2790
HphI GGTGA 3 cut(s) 1514, 1841, 2549
Hpy166II GTNNAC 7 cut(s) 393, 544, 1290, 1327, 1868, 2182, 2235
Hpy8I GTNNAC 7 cut(s) 393, 544, 1290, 1327, 1868, 2182, 2235
HpyAV CCTTC 7 cut(s) 178, 742, 1223, 2148, 2321, 2342, 2657
HpyCH4III ACNGT 4 cut(s) 944, 1255, 1294, 2224
HpyCH4IV ACGT 2 cut(s) 2231, 2681
HpyF10VI GCNNNNNNNGC 4 cut(s) 130, 2058, 2163, 2392
HpySE526I ACGT 2 cut(s) 2231, 2681
Hsp92I GRCGYC 2 cut(s) 1382, 2352
Ksp22I TGATCA 3 cut(s) 442, 1840, 2262
KspAI GTTAAC 1 cut(s) 1290
LmnI GCTCC 7 cut(s) 806, 1153, 1438, 1787, 1812, 2154, 2641
Lsp1109I GCAGC 6 cut(s) 212, 281, 303, 333, 336, 1791
LweI GCATC 4 cut(s) 111, 167, 200, 1597
MaeI CTAG 4 cut(s) 1373, 1442, 2771, 2858
MaeII ACGT 2 cut(s) 2231, 2681
MaeIII GTNAC 6 cut(s) 701, 881, 1614, 1976, 2423, 2682
MfeI CAATTG 4 cut(s) 90, 786, 1625, 1930
MflI RGATCY 7 cut(s) 166, 1604, 1717, 2326, 2470, 2499, 2608
MhlI GDGCHC 3 cut(s) 113, 1329, 2005
MlsI TGGCCA 4 cut(s) 354, 954, 1470, 1928
MluNI TGGCCA 4 cut(s) 354, 954, 1470, 1928
MlyI GAGTC 3 cut(s) 974, 1057, 2705
MmeI TCCRAC 8 cut(s) 358, 961, 1242, 1764, 1877, 2136, 2430, 2758
Mox20I TGGCCA 4 cut(s) 354, 954, 1470, 1928
MroXI GAANNNNTTC 2 cut(s) 1182, 2834
MscI TGGCCA 4 cut(s) 354, 954, 1470, 1928
MslI CAYNNNNRTG 2 cut(s) 102, 1974
Msp20I TGGCCA 4 cut(s) 354, 954, 1470, 1928
MspA1I CMGCKG 1 cut(s) 294
MspI CCGG 4 cut(s) 1857, 2009, 2505, 2790
MspR9I CCNGG 5 cut(s) 970, 2361, 2505, 2716, 2791
MunI CAATTG 4 cut(s) 90, 786, 1625, 1930
MvaI CCWGG 3 cut(s) 970, 2361, 2716
MvnI CGCG 1 cut(s) 824
MwoI GCNNNNNNNGC 4 cut(s) 130, 2058, 2163, 2392
NciI CCSGG 2 cut(s) 2505, 2791
NcoI CCATGG 1 cut(s) 1574
NlaIV GGNNCC 1 cut(s) 2643
NmuCI GTSAC 3 cut(s) 1976, 2423, 2682
NspI RCATGY 1 cut(s) 1762
OliI CACNNNNGTG 1 cut(s) 1974
PaeI GCATGC 1 cut(s) 1762
PcsI WCGNNNNNNNCGW 1 cut(s) 2228
PdmI GAANNNNTTC 2 cut(s) 1182, 2834
PfeI GAWTC 7 cut(s) 1505, 1582, 1633, 1798, 2374, 2462, 2719
PflMI CCANNNNNTGG 1 cut(s) 1673
PfoI TCCNGGA 1 cut(s) 2714
PkrI GCNGC 6 cut(s) 227, 293, 296, 323, 326, 1781
PleI GAGTC 3 cut(s) 973, 1057, 2705
PpsI GAGTC 3 cut(s) 973, 1057, 2705
Ppu21I YACGTR 1 cut(s) 2232
Psp6I CCWGG 3 cut(s) 968, 2359, 2714
PspFI CCCAGC 1 cut(s) 2752
PspGI CCWGG 3 cut(s) 968, 2359, 2714
PspN4I GGNNCC 1 cut(s) 2643
PspPI GGNCC 1 cut(s) 2567
PstNI CAGNNNCTG 1 cut(s) 294
PsuI RGATCY 7 cut(s) 166, 1604, 1717, 2326, 2470, 2499, 2608
PvuII CAGCTG 1 cut(s) 294
RsaI GTAC 7 cut(s) 377, 812, 2013, 2022, 2234, 2365, 2615
RsaNI GTAC 7 cut(s) 376, 811, 2012, 2021, 2233, 2364, 2614
RseI CAYNNNNRTG 2 cut(s) 102, 1974
SatI GCNGC 6 cut(s) 226, 292, 295, 322, 325, 1780
Sau96I GGNCC 1 cut(s) 2567
ScaI AGTACT 1 cut(s) 812
SchI GAGTC 3 cut(s) 974, 1057, 2705
ScrFI CCNGG 5 cut(s) 970, 2361, 2505, 2716, 2791
SduI GDGCHC 3 cut(s) 113, 1329, 2005
SfaNI GCATC 4 cut(s) 111, 167, 200, 1597
SmiMI CAYNNNNRTG 2 cut(s) 102, 1974
SmlI CTYRAG 3 cut(s) 1006, 1243, 2125
SmoI CTYRAG 3 cut(s) 1006, 1243, 2125
SphI GCATGC 1 cut(s) 1762
SsiI CCGC 1 cut(s) 1810
SspMI CTAG 4 cut(s) 1373, 1442, 2771, 2858
StyD4I CCNGG 5 cut(s) 968, 2359, 2503, 2714, 2789
StyI CCWWGG 4 cut(s) 11, 1187, 1574, 2466
TaaI ACNGT 4 cut(s) 944, 1255, 1294, 2224
TaiI ACGT 2 cut(s) 2234, 2684
TaqI TCGA 3 cut(s) 435, 906, 1300
TatI WGTACW 2 cut(s) 810, 2613
TfiI GAWTC 7 cut(s) 1505, 1582, 1633, 1798, 2374, 2462, 2719
TscAI CASTG 2 cut(s) 1299, 1792
TseFI GTSAC 3 cut(s) 1976, 2423, 2682
TseI GCWGC 6 cut(s) 225, 291, 294, 321, 324, 1779
Tsp45I GTSAC 3 cut(s) 1976, 2423, 2682
TspRI CASTG 2 cut(s) 1299, 1792
Van91I CCANNNNNTGG 1 cut(s) 1673
VneI GTGCAC 1 cut(s) 1325
XapI RAATTY 8 cut(s) 357, 369, 629, 713, 760, 957, 1037, 1268
XceI RCATGY 1 cut(s) 1762
XcmI CCANNNNNNNNNTGG 1 cut(s) 1485
XmiI GTMKAC 2 cut(s) 392, 543
XmnI GAANNNNTTC 2 cut(s) 1182, 2834
XspI CTAG 4 cut(s) 1373, 1442, 2771, 2858
ZrmI AGTACT 1 cut(s) 812
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.