MD07G1106700.v1.1

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0000024
Physical Location & Seq
Reverse (-)
12070362 .. 12073197
2836 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1106700.v1.1.491

Sequence Viewer

Length: 2754 bp
ATGGGGTTTCTTGATATCTCCACCATTCGCATTTCAAAACCAGTACTAGTTTTGTTGCTGTTTCATCATGTGGTTATTGCTAACTCTTCCTACTCTTCCTACTCTTCGCAGAAGCAGTATCCATCTTGCCCTGATGAGGAGAAGTCCGCCCTGCTGCAATTCAGAGACAGCTTTACTATTGACAAATCTGCTTCTAGATCTCCCGATGCTTATCCAAAGGTTTCATCATGGAAACCAGCTGAAGGAGGAAATAGCACCTGCTGCTCATGGGAAGGTGTCAAGTGTGACGAGAAGACGGGTCATGTGATTGGCCTAGATCTTGGTAGCAGCTGTCTCCACGGCTCTATCAACAGCAACAGCAGCCTCTTCCGCCTTGTTCATCTTCAAAGGTTAAACCTCTCTGACAATAACTTCAATTACTCTCAAATTCCTACTAGCATTAGGAATTTTCCAAGCCTTACTCATCTTGACCTCTCTACCTCTGTCTTTTCTGGTCAAGTCCCTTCTGAACTTTCACTGTTATCCAAGTTGACATACCTTGATCTATCTCTCAATCTCGATAGATTGTCAGAAGATAAGGATCATCAGTCGTCAGAAGAGAGGAATTATCCCTTGTTGAAACTTGAAGCATCAGATCTTGGAAGCCTAGTTCAAAACTTAACCAGTCTCGAAGTACTTTCTCTCAGTTTTGTAAATGTATCTTCGGCAATTCCTCATTCCATGGCTAATTTATCATCTTTGACAACCCTCTACCTCAGGGACTGTCACCTGTTTGGTGAATTTCCAGTGAGAATTTTCCAACTGCCAAACCTAGAATCTCTTAGTGTGAGATACAACCAAGATCTGACTGGATATTTTCCTGAATTTAATCAAAGAAGTCCTCTCATCTTACTGAAACTCACTTATCTAGACATTTCAGCCAATAAATTTGGAGGTCTAATTCCGGATTCCTTGGCAAACCTTACCCAACTGGCTACTTTTAGGATTAGTACAAGTCGATTAACCGGTCCAATCCCATCTTGGCTAGGCAACTTTAGCAAACTAGAGTACCTAGATTTTGCTTTTAATAGATTAAATGGTTCAGTTCCTGCGTCATTTTCAAATCTCACAAACCTTCAGATCCTGTATCTACATTCGAATACTCTGACTGGTGCAGTAGAGTTTCAAATGTTTCAAAATCTACAATCTCTTTACCAACTCGAATTAAGCTGGAACGGTTTAGAACTTGTCACTGAATCCAGAATTTTGAATTCAACAGTTAAACAGTTCACCGTTCTTGGATTGAGTAATTGCAACTTAGGAGAGTTTCCATCCTTCTTACAATATCAGAATGGGTTGACGCGTTTGGAAATTGCTGGAAACAAAATCCGAGGCCAAGTACCAAGATGGATGTGGAATACAAGCTTAGAAACTTTGCTATTGTTAGACATTTCCAATAACTTCATTTCAGACCAACCTCCACTTGTCCTTCCTTGGGTGAAACTGTTGTGTCTAAGGTTTTCGTCCAACATGTTTCATGGATCACTACCGATACCTCCACCAACCATGCGAGAATATGCAGCTGCAGACAACAACTTTACTGGAGAAATCTCACCGTTGCTTTGCAATATGAAAAATCTTCTGTCCCTTGACTTGTCGAAAAATAACTTGAGTGGCATGCTTTCTCAGTGTCTTGGAAACTTTAGTGATCATCTGACACTTCTACTTCTCGGAAACAACGCTTTTCACGGAATTATTCCTCAGACATACAACAAAGGAAGCAGTTTGAGAATGATTGATGTGAGTCATAACAAGTTGCAGGGGCAGTTGCCGAGGTCATTGGCCAATTGTGTGATGCTTGAGTATCTTGTTTTGTCAAACAATCGTTTCAATGATGTTTTTCCCATTTGGTTGGGAACTCTTCTAGAGTTAAAACTTTTGGCAATGCGCCATAATGGATTCTACGGTGTGATTGGAAAATCTAGAAAGAATGTCGATTTCCCGAAGTTACGCATTCTTGATTTGGCTTACAATGATTTTACTGGAGCGGTTCCATCTGTGTTTCTAGATATTACTGTAAACAAGTCAACATATATGTACACACGTGTAGTTTATGATGTCGATGGATTCCCGGTTTGGAGCAATGTTGATTACCAACTCACAATAGCAACAAAAGGTTTGGAGCAATACTACCCAAAGATCCGAGAAGAATTTGCATCCCTTGATATCTCAAGCAACAAATTTGAAGGGAAAATTCCAGAATTCATTGGGAACCTTAAGGAGCTTCGTTCGCTGAATCTATCCCACAACATTCTCACTGGTTCTATTCCATCATCCTTCAGAAACTTGACGAAGCTTGAATCGTTGGACCTTTCACAAAACAAGCTCTCAGGACAGATCCCCCAACAACTGAGTCGACTTACTTTTCTTGCCAATTTCAATGTGTCTCACAACAATCTCACAGGTCTTATACCACAAGGAACCCAGCTTACTTCATTGAATATCACTTCATACGAGGGAAACCTAGGGTTGTGTGGAGATCCATTGCCAAAGAAATGTGGAAATCCTAAGGCCTCTCAACTTCCACCTTCAATTGTAGACGAAGGTGATTCTAGCTCAGCAGGAATATTTGAATTTGATTGGAAAATTGTTTCAGCCGGATGTGGAAGTGGGTTTGTAGTGGGAGTAATTCTTGCAGATGTTGTGATCACAAGGAGGCCCGATTTGTTTCTTAAGATTGTTGGAATGATCAGACAAATGATAAGGAAAATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

918

Amino Acids

102.2

Weight (kDa)

6.79

Isoelectric Point (pI)

37.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 45 - 96 6.7e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 297 - 478 8.4e-11 Leucine-rich repeat region
LRR_8 PF13855 323 - 382 1.1e-07 Leucine rich repeat
LRR_8 PF13855 347 - 407 2.7e-07 Leucine rich repeat
LRR_8 PF13855 564 - 623 1.2e-08 Leucine rich repeat
LRR_8 PF13855 733 - 789 2.1e-09 Leucine rich repeat
LRR_8 PF13855 754 - 813 3.1e-08 Leucine rich repeat
LRR_4 PF12799 754 - 791 8e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 266
Acc36I ACCTGC 1 cut(s) 266
AccBSI CCGCTC 1 cut(s) 2027
AccI GTMKAC 2 cut(s) 2395, 2577
AccII CGCG 1 cut(s) 1342
AccIII TCCGGA 1 cut(s) 943
AciI CCGC 3 cut(s) 147, 370, 2027
AclWI GGATC 6 cut(s) 588, 1114, 1528, 2173, 2371, 2513
AcoI YGGCCR 1 cut(s) 1821
AcuI CTGAAG 3 cut(s) 261, 1100, 2302
AcvI CACGTG 1 cut(s) 2084
AfaI GTAC 6 cut(s) 45, 675, 991, 1049, 1380, 2078
AfiI CCNNNNNNNGG 3 cut(s) 136, 242, 1474
AflII CTTAAG 2 cut(s) 2255, 2711
AflIII ACRYGT 4 cut(s) 1340, 1509, 2081, 2083
AgeI ACCGGT 1 cut(s) 1004
AhlI ACTAGT 1 cut(s) 46
AloI GAACNNNNNNTCC 2 cut(s) 633, 665
Alw26I GTCTC 4 cut(s) 159, 338, 671, 2430
AlwI GGATC 6 cut(s) 588, 1114, 1528, 2173, 2371, 2513
AlwNI CAGNNNCTG 3 cut(s) 762, 1088, 1123
Aor13HI TCCGGA 1 cut(s) 943
AoxI GGCC 5 cut(s) 310, 1372, 1821, 2550, 2696
ApeKI GCWGC 6 cut(s) 154, 261, 327, 360, 1559, 1562
AsiGI ACCGGT 1 cut(s) 1004
AspA2I CCTAGG 1 cut(s) 2503
AspLEI GCGC 1 cut(s) 1929
AspS9I GGNCC 3 cut(s) 1007, 2347, 2697
AsuC2I CCSGG 1 cut(s) 2111
AsuHPI GGTGA 6 cut(s) 758, 788, 1261, 1489, 1584, 2597
AsuII TTCGAA 1 cut(s) 1136
AvaII GGWCC 2 cut(s) 1007, 2347
AvrII CCTAGG 1 cut(s) 2503
AxyI CCTNAGG 2 cut(s) 755, 2547
BaeI ACNNNNGTAYC 2 cut(s) 1031, 1064
BalI TGGCCA 1 cut(s) 1823
BbrPI CACGTG 1 cut(s) 2084
BbsI GAAGAC 1 cut(s) 299
BbvI GCAGC 6 cut(s) 141, 248, 339, 372, 1549, 1571
BccI CCATC 7 cut(s) 130, 1024, 1318, 1380, 2041, 2096, 2317
BceAI ACGGC 1 cut(s) 355
BciVI GTATCC 1 cut(s) 129
BclI TGATCA 3 cut(s) 1687, 2685, 2727
BcnI CCSGG 1 cut(s) 2111
BcoDI GTCTC 4 cut(s) 159, 338, 671, 2430
BcuI ACTAGT 1 cut(s) 46
BfmI CTRYAG 1 cut(s) 1563
BfrI CTTAAG 2 cut(s) 2255, 2711
BfuAI ACCTGC 1 cut(s) 266
BfuI GTATCC 1 cut(s) 129
BglII AGATCT 4 cut(s) 197, 316, 634, 841
BisI GCNGC 6 cut(s) 155, 262, 328, 361, 1560, 1563
BlnI CCTAGG 1 cut(s) 2503
BlpI GCTNAGC 1 cut(s) 2596
BlsI GCNGC 6 cut(s) 156, 263, 329, 362, 1561, 1564
BmcAI AGTACT 2 cut(s) 45, 675
Bme1390I CCNGG 1 cut(s) 2111
Bme18I GGWCC 2 cut(s) 1007, 2347
BmgT120I GGNCC 3 cut(s) 1007, 2347, 2697
BmiI GGNNCC 3 cut(s) 2031, 2252, 2461
BmrFI CCNGG 1 cut(s) 2111
BmsI GCATC 4 cut(s) 196, 638, 1824, 2204
BpiI GAAGAC 1 cut(s) 299
BpmI CTGGAG 2 cut(s) 1602, 2043
Bpu1102I GCTNAGC 1 cut(s) 2596
Bpu14I TTCGAA 1 cut(s) 1136
BpuEI CTTGAG 3 cut(s) 1669, 1859, 2194
BpuMI CCSGG 1 cut(s) 2111
BsaAI YACGTR 1 cut(s) 2084
BsaBI GATNNNNATC 2 cut(s) 210, 579
BsaJI CCNNGG 7 cut(s) 337, 720, 951, 1369, 1472, 1811, 2503
BsaWI WCCGGW 2 cut(s) 943, 1004
Bsc4I CCNNNNNNNGG 3 cut(s) 136, 242, 1474
Bse118I RCCGGY 1 cut(s) 1004
Bse1I ACTGG 9 cut(s) 41, 663, 785, 853, 975, 1153, 1585, 2026, 2302
Bse21I CCTNAGG 2 cut(s) 755, 2547
Bse3DI GCAATG 3 cut(s) 1929, 2128, 2522
Bse8I GATNNNNATC 2 cut(s) 210, 579
BseAI TCCGGA 1 cut(s) 943
BseDI CCNNGG 7 cut(s) 337, 720, 951, 1369, 1472, 1811, 2503
BseGI GGATG 5 cut(s) 1310, 1395, 2195, 2312, 2645
BseJI GATNNNNATC 2 cut(s) 210, 579
BseLI CCNNNNNNNGG 3 cut(s) 136, 242, 1474
BseMI GCAATG 3 cut(s) 1929, 2128, 2522
BseMII CTCAG 7 cut(s) 697, 769, 1679, 1754, 2381, 2382, 2610
BseNI ACTGG 9 cut(s) 41, 663, 785, 853, 975, 1153, 1585, 2026, 2302
BseRI GAGGAG 1 cut(s) 152
BseXI GCAGC 6 cut(s) 141, 248, 339, 372, 1549, 1571
BseYI CCCAGC 1 cut(s) 2463
BsgI GTGCAG 1 cut(s) 1173
Bsh1236I CGCG 1 cut(s) 1342
BshFI GGCC 5 cut(s) 312, 1374, 1823, 2552, 2698
BshTI ACCGGT 1 cut(s) 1004
BsiSI CCGG 4 cut(s) 944, 1005, 2111, 2637
BslFI GGGAC 3 cut(s) 485, 773, 1609
BslI CCNNNNNNNGG 3 cut(s) 136, 242, 1474
BsmAI GTCTC 4 cut(s) 159, 338, 671, 2430
BsmFI GGGAC 3 cut(s) 485, 773, 1609
BsmI GAATGC 1 cut(s) 1992
BsnI GGCC 5 cut(s) 312, 1374, 1823, 2552, 2698
Bsp119I TTCGAA 1 cut(s) 1136
Bsp13I TCCGGA 1 cut(s) 943
Bsp1407I TGTACA 1 cut(s) 2076
Bsp1720I GCTNAGC 1 cut(s) 2596
Bsp19I CCATGG 1 cut(s) 720
BspACI CCGC 3 cut(s) 147, 370, 2027
BspANI GGCC 5 cut(s) 312, 1374, 1823, 2552, 2698
BspCNI CTCAG 7 cut(s) 696, 768, 1678, 1753, 2381, 2382, 2609
BspEI TCCGGA 1 cut(s) 943
BspFNI CGCG 1 cut(s) 1342
BspLI GGNNCC 3 cut(s) 2031, 2252, 2461
BspMAI CTGCAG 1 cut(s) 1567
BspMI ACCTGC 1 cut(s) 266
BspPI GGATC 6 cut(s) 588, 1114, 1528, 2173, 2371, 2513
BspT104I TTCGAA 1 cut(s) 1136
BspTI CTTAAG 2 cut(s) 2255, 2711
BsrBI CCGCTC 1 cut(s) 2027
BsrDI GCAATG 3 cut(s) 1929, 2128, 2522
BsrFI RCCGGY 1 cut(s) 1004
BsrGI TGTACA 1 cut(s) 2076
BsrI ACTGG 9 cut(s) 41, 663, 785, 853, 975, 1153, 1585, 2026, 2302
BssAI RCCGGY 1 cut(s) 1004
BssECI CCNNGG 7 cut(s) 337, 720, 951, 1369, 1472, 1811, 2503
BssT1I CCWWGG 4 cut(s) 720, 951, 1472, 2503
Bst6I CTCTTC 6 cut(s) 91, 100, 109, 371, 591, 1905
BstAFI CTTAAG 2 cut(s) 2255, 2711
BstAPI GCANNNNNTGC 1 cut(s) 261
BstAUI TGTACA 1 cut(s) 2076
BstBAI YACGTR 1 cut(s) 2084
BstBI TTCGAA 1 cut(s) 1136
BstC8I GCNNGC 1 cut(s) 1658
BstDSI CCRYGG 2 cut(s) 337, 720
BstF5I GGATG 5 cut(s) 1310, 1395, 2195, 2312, 2645
BstFNI CGCG 1 cut(s) 1342
BstHHI GCGC 1 cut(s) 1929
BstMAI GTCTC 4 cut(s) 159, 338, 671, 2430
BstMWI GCNNNNNNNGC 5 cut(s) 261, 360, 369, 1035, 2269
BstNSI RCATGY 2 cut(s) 1513, 1660
BstSCI CCNGG 1 cut(s) 2109
BstSFI CTRYAG 1 cut(s) 1563
BstUI CGCG 1 cut(s) 1342
BstV1I GCAGC 6 cut(s) 141, 248, 339, 372, 1549, 1571
BstV2I GAAGAC 1 cut(s) 299
BstX2I RGATCY 8 cut(s) 197, 316, 634, 841, 1119, 2178, 2376, 2518
BstXI CCANNNNNNTGG 1 cut(s) 1891
BstYI RGATCY 8 cut(s) 197, 316, 634, 841, 1119, 2178, 2376, 2518
Bsu36I CCTNAGG 2 cut(s) 755, 2547
BsuI GTATCC 1 cut(s) 129
BsuRI GGCC 5 cut(s) 312, 1374, 1823, 2552, 2698
BtgI CCRYGG 2 cut(s) 337, 720
BtsCI GGATG 5 cut(s) 1310, 1395, 2195, 2312, 2645
BtsIMutI CAGTG 5 cut(s) 515, 792, 1230, 1673, 2295
BveI ACCTGC 1 cut(s) 266
Cac8I GCNNGC 1 cut(s) 1658
CaiI CAGNNNCTG 3 cut(s) 762, 1088, 1123
CfoI GCGC 1 cut(s) 1929
Cfr10I RCCGGY 1 cut(s) 1004
Cfr13I GGNCC 3 cut(s) 1007, 2347, 2697
CseI GACGC 2 cut(s) 1080, 1348
Csp6I GTAC 6 cut(s) 44, 674, 990, 1048, 1379, 2077
CspAI ACCGGT 1 cut(s) 1004
CviAII CATG 9 cut(s) 68, 228, 267, 302, 721, 1510, 1517, 1546, 1657
CviQI GTAC 6 cut(s) 44, 674, 990, 1048, 1379, 2077
EaeI YGGCCR 1 cut(s) 1821
Eam1104I CTCTTC 6 cut(s) 91, 100, 109, 371, 591, 1905
EarI CTCTTC 6 cut(s) 91, 100, 109, 371, 591, 1905
EciI GGCGGA 2 cut(s) 136, 359
Eco130I CCWWGG 4 cut(s) 720, 951, 1472, 2503
Eco147I AGGCCT 1 cut(s) 2552
Eco32I GATATC 2 cut(s) 16, 2206
Eco47I GGWCC 2 cut(s) 1007, 2347
Eco57I CTGAAG 3 cut(s) 261, 1100, 2302
Eco72I CACGTG 1 cut(s) 2084
Eco81I CCTNAGG 2 cut(s) 755, 2547
EcoRI GAATTC 2 cut(s) 1249, 2240
EcoRV GATATC 2 cut(s) 16, 2206
EcoT14I CCWWGG 4 cut(s) 720, 951, 1472, 2503
ErhI CCWWGG 4 cut(s) 720, 951, 1472, 2503
FaeI CATG 9 cut(s) 71, 231, 270, 305, 724, 1513, 1520, 1549, 1660
FaqI GGGAC 3 cut(s) 485, 773, 1609
FatI CATG 9 cut(s) 67, 227, 266, 301, 720, 1509, 1516, 1545, 1656
FbaI TGATCA 3 cut(s) 1687, 2685, 2727
FblI GTMKAC 2 cut(s) 2395, 2577
Fnu4HI GCNGC 6 cut(s) 155, 262, 328, 361, 1560, 1563
FokI GGATG 5 cut(s) 1297, 1402, 2182, 2299, 2652
Fsp4HI GCNGC 6 cut(s) 155, 262, 328, 361, 1560, 1563
GlaI GCGC 1 cut(s) 1928
GluI GCNGC 6 cut(s) 155, 262, 328, 361, 1560, 1563
GsaI CCCAGC 1 cut(s) 2467
GsuI CTGGAG 2 cut(s) 1602, 2043
HaeIII GGCC 5 cut(s) 312, 1374, 1823, 2552, 2698
HapII CCGG 4 cut(s) 944, 1005, 2111, 2637
HgaI GACGC 2 cut(s) 1080, 1348
HhaI GCGC 1 cut(s) 1929
Hin1II CATG 9 cut(s) 71, 231, 270, 305, 724, 1513, 1520, 1549, 1660
Hin6I GCGC 1 cut(s) 1927
HinP1I GCGC 1 cut(s) 1927
HincII GTYRAC 4 cut(s) 531, 1338, 2067, 2396
HindII GTYRAC 4 cut(s) 531, 1338, 2067, 2396
HindIII AAGCTT 2 cut(s) 1402, 2333
HpaII CCGG 4 cut(s) 944, 1005, 2111, 2637
HphI GGTGA 6 cut(s) 758, 788, 1261, 1489, 1584, 2597
Hpy166II GTNNAC 8 cut(s) 531, 1269, 1338, 2059, 2067, 2079, 2396, 2578
Hpy8I GTNNAC 8 cut(s) 531, 1269, 1338, 2059, 2067, 2079, 2396, 2578
HpyCH4IV ACGT 1 cut(s) 2083
HpyCH4V TGCA 9 cut(s) 157, 1154, 1293, 1559, 1565, 1605, 1798, 2195, 2675
HpyF10VI GCNNNNNNNGC 5 cut(s) 261, 360, 369, 1035, 2269
HpySE526I ACGT 1 cut(s) 2083
Hsp92II CATG 9 cut(s) 71, 231, 270, 305, 724, 1513, 1520, 1549, 1660
HspAI GCGC 1 cut(s) 1927
Kpn2I TCCGGA 1 cut(s) 943
Ksp22I TGATCA 3 cut(s) 1687, 2685, 2727
LmnI GCTCC 4 cut(s) 2024, 2118, 2161, 2260
Lsp1109I GCAGC 6 cut(s) 141, 248, 339, 372, 1549, 1571
LweI GCATC 4 cut(s) 196, 638, 1824, 2204
MaeII ACGT 1 cut(s) 2083
MaeIII GTNAC 4 cut(s) 284, 764, 1228, 1986
MbiI CCGCTC 1 cut(s) 2027
MfeI CAATTG 2 cut(s) 1825, 2571
MflI RGATCY 8 cut(s) 197, 316, 634, 841, 1119, 2178, 2376, 2518
MlsI TGGCCA 1 cut(s) 1823
MluI ACGCGT 1 cut(s) 1340
MluNI TGGCCA 1 cut(s) 1823
MlyI GAGTC 2 cut(s) 1792, 2401
MmeI TCCRAC 4 cut(s) 823, 1530, 2325, 2701
Mox20I TGGCCA 1 cut(s) 1823
MroI TCCGGA 1 cut(s) 943
MscI TGGCCA 1 cut(s) 1823
Msp20I TGGCCA 1 cut(s) 1823
MspA1I CMGCKG 3 cut(s) 239, 330, 1562
MspCI CTTAAG 2 cut(s) 2255, 2711
MspI CCGG 4 cut(s) 944, 1005, 2111, 2637
MspR9I CCNGG 1 cut(s) 2111
MunI CAATTG 2 cut(s) 1825, 2571
Mva1269I GAATGC 1 cut(s) 1992
MvnI CGCG 1 cut(s) 1342
MwoI GCNNNNNNNGC 5 cut(s) 261, 360, 369, 1035, 2269
NciI CCSGG 1 cut(s) 2111
NcoI CCATGG 1 cut(s) 720
NlaIII CATG 9 cut(s) 71, 231, 270, 305, 724, 1513, 1520, 1549, 1660
NlaIV GGNNCC 3 cut(s) 2031, 2252, 2461
NmeAIII GCCGAG 1 cut(s) 1836
NmuCI GTSAC 3 cut(s) 284, 764, 1228
NspI RCATGY 2 cut(s) 1513, 1660
NspV TTCGAA 1 cut(s) 1136
PaeI GCATGC 1 cut(s) 1660
PaqCI CACCTGC 1 cut(s) 266
PceI AGGCCT 1 cut(s) 2552
PciI ACATGT 1 cut(s) 1509
PctI GAATGC 1 cut(s) 1992
PfeI GAWTC 8 cut(s) 815, 947, 1235, 1938, 2106, 2275, 2339, 2588
PinAI ACCGGT 1 cut(s) 1004
PkrI GCNGC 6 cut(s) 156, 263, 329, 362, 1561, 1564
PleI GAGTC 2 cut(s) 1791, 2400
PmaCI CACGTG 1 cut(s) 2084
PmlI CACGTG 1 cut(s) 2084
PpsI GAGTC 2 cut(s) 1791, 2400
Ppu21I YACGTR 1 cut(s) 2084
PscI ACATGT 1 cut(s) 1509
PspCI CACGTG 1 cut(s) 2084
PspFI CCCAGC 1 cut(s) 2463
PspN4I GGNNCC 3 cut(s) 2031, 2252, 2461
PspPI GGNCC 3 cut(s) 1007, 2347, 2697
PsrI GAACNNNNNNTAC 2 cut(s) 2452, 2484
PstI CTGCAG 1 cut(s) 1567
PstNI CAGNNNCTG 3 cut(s) 762, 1088, 1123
PsuI RGATCY 8 cut(s) 197, 316, 634, 841, 1119, 2178, 2376, 2518
PvuII CAGCTG 3 cut(s) 239, 330, 1562
RsaI GTAC 6 cut(s) 45, 675, 991, 1049, 1380, 2078
RsaNI GTAC 6 cut(s) 44, 674, 990, 1048, 1379, 2077
SalI GTCGAC 1 cut(s) 2394
SatI GCNGC 6 cut(s) 155, 262, 328, 361, 1560, 1563
Sau96I GGNCC 3 cut(s) 1007, 2347, 2697
ScaI AGTACT 2 cut(s) 45, 675
SchI GAGTC 2 cut(s) 1792, 2401
ScrFI CCNGG 1 cut(s) 2111
SfaNI GCATC 4 cut(s) 196, 638, 1824, 2204
SfcI CTRYAG 1 cut(s) 1563
SfuI TTCGAA 1 cut(s) 1136
SinI GGWCC 2 cut(s) 1007, 2347
SmlI CTYRAG 5 cut(s) 1648, 1838, 2209, 2255, 2711
SmoI CTYRAG 5 cut(s) 1648, 1838, 2209, 2255, 2711
SpeI ACTAGT 1 cut(s) 46
SphI GCATGC 1 cut(s) 1660
SseBI AGGCCT 1 cut(s) 2552
SsiI CCGC 3 cut(s) 147, 370, 2027
SspI AATATT 1 cut(s) 2607
StuI AGGCCT 1 cut(s) 2552
StyD4I CCNGG 1 cut(s) 2109
StyI CCWWGG 4 cut(s) 720, 951, 1472, 2503
TaiI ACGT 1 cut(s) 2086
TaqI TCGA 9 cut(s) 558, 669, 997, 1136, 1200, 1637, 1974, 2100, 2395
TatI WGTACW 4 cut(s) 43, 673, 989, 2076
TfiI GAWTC 8 cut(s) 815, 947, 1235, 1938, 2106, 2275, 2339, 2588
TscAI CASTG 5 cut(s) 522, 792, 1237, 1673, 2302
TseFI GTSAC 3 cut(s) 284, 764, 1228
TseI GCWGC 6 cut(s) 154, 261, 327, 360, 1559, 1562
Tsp45I GTSAC 3 cut(s) 284, 764, 1228
TspDTI ATGAA 9 cut(s) 53, 213, 368, 1432, 1505, 1625, 2233, 2463, 2478
TspGWI ACGGA 1 cut(s) 1743
TspRI CASTG 5 cut(s) 522, 792, 1237, 1673, 2302
Vha464I CTTAAG 2 cut(s) 2255, 2711
VpaK11BI GGWCC 2 cut(s) 1007, 2347
XbaI TCTAGA 5 cut(s) 194, 907, 1903, 1961, 2044
XceI RCATGY 2 cut(s) 1513, 1660
XcmI CCANNNNNNNNNTGG 3 cut(s) 845, 1017, 1389
XmaJI CCTAGG 1 cut(s) 2503
XmiI GTMKAC 2 cut(s) 2395, 2577
ZrmI AGTACT 2 cut(s) 45, 675
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.