MD07G1107800.v1.1

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0000024
Physical Location & Seq
Reverse (-)
12270732 .. 12273593
2862 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1107800.v1.1.491

Sequence Viewer

Length: 2862 bp
ATGGGGTTACTTGACATCTCCATCATTCGCATGGTTTCAAAACTAGTACTAGTTTTGTTGCTGTTTCATCATGTGGTTATTGCTAACTCTTCGTACTCTTCGCAGAAGCAGTATCCCTCTTGCCCTGATGAGGAGAAGTCCGCCCTGCTGCAATTCAAAGACGGCTTTCTTATTGACAAATCTGCTTCTAGCGATGGTTATCCAAAGGTTTCATCATGGAAACCAGCTGAAGGAGAAAACAGCACGTGCTGCTCATGGGAAGGTGTCAAGTGTGACGAGAAGACAGGTCATGTGATTGCCCTAGATCTTGGTAGCAGTTGTCTCTACGGCTCTATCAACAGCAATAGCAGCCTCTTCCGCCTCGTTCATCTTCAAAGGTTAAATCTCTCTGATAATAACTTCAATCACTCTCAAATTCCTACTAGCATTAGGAATTTTCCAAGCCTTACTCATCTTGACCTCTCTTTCTCTGTCTTTTCTGGTCAAGTTCCTTCAGAAGTTTCACTGTTATCCAAGTTGACATACCTTGATCTATCTGGCAATGTAGATCCTTTGTCAGAAGATGAGGATCGTCCCTTGTTGAAACTTGAGGCATCAGATCTTGGAAGCCTGGTTCATAACTTAACTAGTCTCGAGGTACTTTCTCTCAGTTTCGTAAACATATCTTCGGCAATTCCTCATTCAATGGCTAACTTATCATCTTTGAAAACCCTAGCCCTCGTGGAATGTCACCTGTTTGGTGAATTTCCGGTGAGAATTTTCCAGCTACCAAACCTAGAAATTCTTACTGTGAGATACAACCAAGATCTGACTGGATATTTTCCTGAATTTAATCGAAGTAGTCCTCTCATGCTTCTGAAAGTTTCATTTACCAGTTTTTTCGGAAACGTACCCTCTTCGATTGGAAACCTTGATTCACTGCAAAAGTTGGATGTGGCTCAATGCAATTTTTCGGAAGGGTTGGTTCCATCTTCACTTGGGAATCTTAGGAAGCTCACTTATCTAGACATTTCAGCCAACAAATTTGGAGGTCCAATTCCTGATTCCTTCTCAAACCTTACCCAACTGGTTACTTTTAGGATTAGTACGAGTCGATTAACTGGTCCAATCCCATCTTGGTTAGGAAACTTTAGCAAACTAGAGTACCTAGATTTTAATTATAATAGATTAAATGGTTCAGTTCCCTTGTCATTTTCAAATCTCACAAACCTTCAGATCCTTTACCTAGCATCGAATAGTCTGAGTGGTGTAGTGGAGTTTCAAATGTTTCAAAATCTAAAATTTCTTTCCCAACTCACATTCAATTGGAACAGTTTAGAATTTGTCACTGAATCCAGAATTGTGAATTCAACAGTTCAACAATTCACCATTCTTGGATTGAGTTCTTGCAACATAAGTGAGTTTCCATCCTTCTTACAATATCAAAAGGGGTTGACGCGTTTCGACATTGCTGCAAACAAAATCCAGGGCCAAGTACCAAAATGGATGTGGAACACAAGCATAGAAACTTTGGTATTCTTAGACATGAGTCAAAACTTCATTTCAGACCAACTTCCACCTGTCCTTCCTTGGGTGAACATGGTATGCTTCAAGTTTTCGTCCAACAGGTTTCATGGATCACTACCGATAGCTCCACCAACCATGCTAGAATATACAGCTACAGACAACAACCTTACTGGAGAAATCTCACCCTTGCTTTGCAATATGAAAAATCTTCAGTTGCTTGACTTGTCGAAAAATAAGTTGAGTGGCATGCTTCCTCAATGTCTCGGAAACTTTAGTGATGATCTGATTCTTTTACTTCTTGGAAACAACTCCTTTCATGGAGTTATTCCTCAGACATACAACAACGGAAACAGTTTGAGGATGATTGACGTGAGTCATAACAAATTGCAGGGGCAATTGCCGAGGTCATTGGTCAATTGTGTGAGGCTTGAGTATCTTGTTTTGTCAAACAATCAATTCAATGATGTTTTTCCCATTTGGTTGGGGACTCTTCTAGAGTTAAAACTTTTGGCAATGCGCCATAATGGATTCTACGGTGTGATTCGAAAATCTAGAATGAATGTCGATTTCCCCAAGTTACGCATTCTTGATTTGTCTTACAATAATTTTACTGGCGCGGTTCCATCTATCTTTCCAGATATTATTATAAACAAGTCAGCCTATATGTATACAGACGTAGTTTATGATGTCAGCGGGATCACGATTGATAGAAGAGGTGATTACGCACTCACAATAGCAACGAAAGGTTTGGAGCAATACTATCCAAAGATTCGAGAAGAATTTGCATCCTTTGATATATCAAGCAACAAATTTGAAGGAAAGATTCCAGAATTCATCGGGAATCTTAAGGAGCTTCATTCTCTGAATCTTTCCCACAACAGTCTCACTGGTTCTATCCCATCATCCTTTGGAAACTTGATGAACCTTGAATCGTTGGACCTTTCGCAAAACATGCTCTCAGGACAGATCCCCCCACAACTAAAGCAACTTACTTTTCTTGGCAGTTTCAATGTGTCTCACAACAATCTCACAGGTCCTATACCACAAGGAACCCAGCTTACTTCATTGAATATCACTTCATATGAGGGAAACCCAGGGTTGTGTGGAGATCCATTGCCAAAGAAATGTGGAAATTCTACGGCCCCTCAACGTCCACCTTCAACCGTAGACGAAGGTGATTCTAGCTCAGCAGGAATATTTGAATTTGGTTGGAAAATTGTTTCGGCCGGATGTGGAAGTGGGTTGGTCGTGGGGTTAGTTCTTGCTGATGTTGTGATCACAAGGAGGCCCGACTTGTTTCTTAAGATTGTTGGAATGATCAGACAAATGATATATAAGGAAAATTTAGAGTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

954

Amino Acids

105.8

Weight (kDa)

5.87

Isoelectric Point (pI)

36.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 43 - 92 2.6e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 101 - 239 2e-09 Leucine-rich repeat region
LRR_14 PF23598 300 - 510 5.3e-15 Leucine-rich repeat region
LRR_8 PF13855 355 - 414 1.8e-07 Leucine rich repeat
LRR_8 PF13855 600 - 655 9.8e-08 Leucine rich repeat
LRR_8 PF13855 765 - 821 2.5e-07 Leucine rich repeat
LRR_8 PF13855 786 - 845 3.7e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1161, 2153
AccI GTMKAC 2 cut(s) 2174, 2673
AccII CGCG 2 cut(s) 1438, 2123
AciI CCGC 4 cut(s) 141, 358, 2123, 2199
AclWI GGATC 7 cut(s) 542, 576, 1210, 1624, 2210, 2467, 2609
AcoI YGGCCR 1 cut(s) 2730
AcuI CTGAAG 4 cut(s) 249, 477, 1196, 1700
AcvI CACGTG 1 cut(s) 246
AfaI GTAC 8 cut(s) 48, 95, 639, 891, 1087, 1145, 1476, 2858
AfiI CCNNNNNNNGG 3 cut(s) 130, 230, 1570
AflII CTTAAG 2 cut(s) 2351, 2807
AflIII ACRYGT 1 cut(s) 1436
AhlI ACTAGT 3 cut(s) 43, 49, 626
AjiI CACGTC 1 cut(s) 1876
AjnI CCWGG 3 cut(s) 609, 1464, 2599
AjuI GAANNNNNNNTTGG 2 cut(s) 1027, 1059
AloI GAACNNNNNNTCC 2 cut(s) 597, 629
AluBI AGCT 8 cut(s) 227, 766, 994, 1631, 1658, 2359, 2563, 2691
AluI AGCT 8 cut(s) 227, 766, 994, 1631, 1658, 2359, 2563, 2691
Alw26I GTCTC 5 cut(s) 326, 635, 1772, 2393, 2526
AlwI GGATC 7 cut(s) 542, 576, 1210, 1624, 2210, 2467, 2609
Ama87I CYCGRG 1 cut(s) 632
AoxI GGCC 4 cut(s) 1468, 2646, 2730, 2792
ApeKI GCWGC 4 cut(s) 148, 249, 348, 1451
AspLEI GCGC 2 cut(s) 2025, 2123
AspS9I GGNCC 7 cut(s) 1031, 1103, 1468, 2443, 2540, 2647, 2793
AsuHPI GGTGA 8 cut(s) 722, 752, 763, 1357, 1585, 1680, 2234, 2693
AsuII TTCGAA 1 cut(s) 2050
AvaI CYCGRG 1 cut(s) 632
AvaII GGWCC 4 cut(s) 1031, 1103, 2443, 2540
BaeI ACNNNNGTAYC 2 cut(s) 1127, 1160
BauI CACGAG 1 cut(s) 719
BbrPI CACGTG 1 cut(s) 246
BbsI GAAGAC 1 cut(s) 287
BbvI GCAGC 4 cut(s) 135, 236, 360, 1438
BccI CCATC 7 cut(s) 29, 188, 976, 1120, 1414, 2137, 2413
BceAI ACGGC 3 cut(s) 178, 343, 2661
BcgI CGANNNNNNTGC 2 cut(s) 1433, 1467
BciT130I CCWGG 3 cut(s) 611, 1466, 2601
BciVI GTATCC 1 cut(s) 123
BclI TGATCA 2 cut(s) 2781, 2823
BcoDI GTCTC 5 cut(s) 326, 635, 1772, 2393, 2526
BcuI ACTAGT 3 cut(s) 43, 49, 626
BfmI CTRYAG 1 cut(s) 1659
BfrI CTTAAG 2 cut(s) 2351, 2807
BfuI GTATCC 1 cut(s) 123
BglII AGATCT 3 cut(s) 304, 598, 805
BisI GCNGC 4 cut(s) 149, 250, 349, 1452
BlpI GCTNAGC 1 cut(s) 2692
BlsI GCNGC 4 cut(s) 150, 251, 350, 1453
BmcAI AGTACT 2 cut(s) 48, 2858
Bme1390I CCNGG 3 cut(s) 611, 1466, 2601
Bme18I GGWCC 4 cut(s) 1031, 1103, 2443, 2540
BmeT110I CYCGRG 1 cut(s) 632
BmgBI CACGTC 1 cut(s) 1876
BmgT120I GGNCC 7 cut(s) 1031, 1103, 1468, 2443, 2540, 2647, 2793
BmiI GGNNCC 4 cut(s) 966, 2127, 2557, 2649
BmrFI CCNGG 3 cut(s) 611, 1466, 2601
BmsI GCATC 3 cut(s) 602, 1238, 2300
BoxI GACNNNNGTC 2 cut(s) 1527, 1878
BpiI GAAGAC 1 cut(s) 287
BpmI CTGGAG 1 cut(s) 1698
Bpu1102I GCTNAGC 1 cut(s) 2692
Bpu14I TTCGAA 1 cut(s) 2050
BpuEI CTTGAG 2 cut(s) 608, 1955
BsaAI YACGTR 1 cut(s) 246
BsaBI GATNNNNATC 2 cut(s) 198, 567
BsaJI CCNNGG 5 cut(s) 1465, 1568, 1907, 2599, 2600
BsaWI WCCGGW 1 cut(s) 748
Bsc4I CCNNNNNNNGG 3 cut(s) 130, 230, 1570
Bse1I ACTGG 7 cut(s) 817, 873, 1071, 1105, 1681, 2122, 2398
Bse3DI GCAATG 4 cut(s) 547, 1446, 2025, 2618
Bse8I GATNNNNATC 2 cut(s) 198, 567
BseBI CCWGG 3 cut(s) 611, 1466, 2601
BseDI CCNNGG 5 cut(s) 1465, 1568, 1907, 2599, 2600
BseGI GGATG 7 cut(s) 937, 1406, 1491, 1872, 2291, 2408, 2741
BseJI GATNNNNATC 2 cut(s) 198, 567
BseLI CCNNNNNNNGG 3 cut(s) 130, 230, 1570
BseMI GCAATG 4 cut(s) 547, 1446, 2025, 2618
BseMII CTCAG 5 cut(s) 661, 1232, 1850, 2478, 2706
BseNI ACTGG 7 cut(s) 817, 873, 1071, 1105, 1681, 2122, 2398
BseRI GAGGAG 1 cut(s) 146
BseX3I CGGCCG 1 cut(s) 2730
BseXI GCAGC 4 cut(s) 135, 236, 360, 1438
BseYI CCCAGC 1 cut(s) 2559
Bsh1236I CGCG 2 cut(s) 1438, 2123
Bsh1285I CGRYCG 1 cut(s) 2733
BshFI GGCC 4 cut(s) 1470, 2648, 2732, 2794
BsiEI CGRYCG 1 cut(s) 2733
BsiHKCI CYCGRG 1 cut(s) 632
BsiSI CCGG 2 cut(s) 749, 2733
BslFI GGGAC 2 cut(s) 558, 2005
BslI CCNNNNNNNGG 3 cut(s) 130, 230, 1570
BsmAI GTCTC 5 cut(s) 326, 635, 1772, 2393, 2526
BsmFI GGGAC 2 cut(s) 558, 2005
BsmI GAATGC 1 cut(s) 2088
BsnI GGCC 4 cut(s) 1470, 2648, 2732, 2794
BsoBI CYCGRG 1 cut(s) 632
Bsp119I TTCGAA 1 cut(s) 2050
Bsp1720I GCTNAGC 1 cut(s) 2692
BspACI CCGC 4 cut(s) 141, 358, 2123, 2199
BspANI GGCC 4 cut(s) 1470, 2648, 2732, 2794
BspCNI CTCAG 5 cut(s) 660, 1233, 1849, 2477, 2705
BspFNI CGCG 2 cut(s) 1438, 2123
BspLI GGNNCC 4 cut(s) 966, 2127, 2557, 2649
BspPI GGATC 7 cut(s) 542, 576, 1210, 1624, 2210, 2467, 2609
BspT104I TTCGAA 1 cut(s) 2050
BspTI CTTAAG 2 cut(s) 2351, 2807
BsrDI GCAATG 4 cut(s) 547, 1446, 2025, 2618
BsrI ACTGG 7 cut(s) 817, 873, 1071, 1105, 1681, 2122, 2398
BssECI CCNNGG 5 cut(s) 1465, 1568, 1907, 2599, 2600
BssNAI GTATAC 1 cut(s) 2175
BssSI CACGAG 1 cut(s) 719
BssT1I CCWWGG 1 cut(s) 1568
Bst1107I GTATAC 1 cut(s) 2175
Bst2BI CACGAG 1 cut(s) 719
Bst2UI CCWGG 3 cut(s) 611, 1466, 2601
Bst4CI ACNGT 8 cut(s) 507, 790, 1313, 1354, 1859, 2042, 2387, 2671
Bst6I CTCTTC 6 cut(s) 94, 103, 359, 901, 2001, 2212
BstAFI CTTAAG 2 cut(s) 2351, 2807
BstAPI GCANNNNNTGC 2 cut(s) 249, 2458
BstBAI YACGTR 1 cut(s) 246
BstBI TTCGAA 1 cut(s) 2050
BstC8I GCNNGC 1 cut(s) 1754
BstDEI CTNAG 7 cut(s) 647, 986, 1241, 1519, 1836, 2464, 2692
BstF5I GGATG 7 cut(s) 937, 1406, 1491, 1872, 2291, 2408, 2741
BstFNI CGCG 2 cut(s) 1438, 2123
BstHHI GCGC 2 cut(s) 2025, 2123
BstMAI GTCTC 5 cut(s) 326, 635, 1772, 2393, 2526
BstMCI CGRYCG 1 cut(s) 2733
BstMWI GCNNNNNNNGC 4 cut(s) 249, 348, 357, 2458
BstNI CCWGG 3 cut(s) 611, 1466, 2601
BstNSI RCATGY 2 cut(s) 1756, 2461
BstPAI GACNNNNGTC 2 cut(s) 1527, 1878
BstSCI CCNGG 3 cut(s) 609, 1464, 2599
BstSFI CTRYAG 1 cut(s) 1659
BstUI CGCG 2 cut(s) 1438, 2123
BstV1I GCAGC 4 cut(s) 135, 236, 360, 1438
BstV2I GAAGAC 1 cut(s) 287
BstX2I RGATCY 7 cut(s) 304, 547, 598, 805, 1215, 2472, 2614
BstXI CCANNNNNNTGG 1 cut(s) 1987
BstYI RGATCY 7 cut(s) 304, 547, 598, 805, 1215, 2472, 2614
BstZ17I GTATAC 1 cut(s) 2175
BstZI CGGCCG 1 cut(s) 2730
BsuI GTATCC 1 cut(s) 123
BsuRI GGCC 4 cut(s) 1470, 2648, 2732, 2794
BtgZI GCGATG 1 cut(s) 207
BtrI CACGTC 1 cut(s) 1876
BtsCI GGATG 7 cut(s) 937, 1406, 1491, 1872, 2291, 2408, 2741
BtsI GCAGTG 1 cut(s) 917
BtsIMutI CAGTG 4 cut(s) 503, 917, 1326, 2391
Cac8I GCNNGC 1 cut(s) 1754
CfoI GCGC 2 cut(s) 2025, 2123
Cfr13I GGNCC 7 cut(s) 1031, 1103, 1468, 2443, 2540, 2647, 2793
CseI GACGC 1 cut(s) 1444
Csp6I GTAC 8 cut(s) 47, 94, 638, 890, 1086, 1144, 1475, 2857
CviQI GTAC 8 cut(s) 47, 94, 638, 890, 1086, 1144, 1475, 2857
DdeI CTNAG 7 cut(s) 647, 986, 1241, 1519, 1836, 2464, 2692
EaeI YGGCCR 1 cut(s) 2730
EagI CGGCCG 1 cut(s) 2730
Eam1104I CTCTTC 6 cut(s) 94, 103, 359, 901, 2001, 2212
EarI CTCTTC 6 cut(s) 94, 103, 359, 901, 2001, 2212
EciI GGCGGA 2 cut(s) 130, 347
EclXI CGGCCG 1 cut(s) 2730
Eco130I CCWWGG 1 cut(s) 1568
Eco47I GGWCC 4 cut(s) 1031, 1103, 2443, 2540
Eco52I CGGCCG 1 cut(s) 2730
Eco57I CTGAAG 4 cut(s) 249, 477, 1196, 1700
Eco72I CACGTG 1 cut(s) 246
Eco88I CYCGRG 1 cut(s) 632
EcoO109I RGGNCCY 1 cut(s) 2540
EcoRI GAATTC 2 cut(s) 1345, 2336
EcoRII CCWGG 3 cut(s) 609, 1464, 2599
EcoT14I CCWWGG 1 cut(s) 1568
ErhI CCWWGG 1 cut(s) 1568
FaqI GGGAC 2 cut(s) 558, 2005
FauI CCCGC 1 cut(s) 2192
FauNDI CATATG 1 cut(s) 2587
FbaI TGATCA 2 cut(s) 2781, 2823
FblI GTMKAC 2 cut(s) 2174, 2673
Fnu4HI GCNGC 4 cut(s) 149, 250, 349, 1452
FokI GGATG 7 cut(s) 944, 1393, 1498, 1879, 2278, 2395, 2748
Fsp4HI GCNGC 4 cut(s) 149, 250, 349, 1452
GlaI GCGC 2 cut(s) 2024, 2122
GluI GCNGC 4 cut(s) 149, 250, 349, 1452
GsaI CCCAGC 1 cut(s) 2563
GsuI CTGGAG 1 cut(s) 1698
HaeIII GGCC 4 cut(s) 1470, 2648, 2732, 2794
HapII CCGG 2 cut(s) 749, 2733
HgaI GACGC 1 cut(s) 1444
HhaI GCGC 2 cut(s) 2025, 2123
Hin6I GCGC 2 cut(s) 2023, 2121
HinP1I GCGC 2 cut(s) 2023, 2121
HincII GTYRAC 2 cut(s) 519, 1434
HindII GTYRAC 2 cut(s) 519, 1434
HpaII CCGG 2 cut(s) 749, 2733
HphI GGTGA 8 cut(s) 722, 752, 763, 1357, 1585, 1680, 2234, 2693
Hpy166II GTNNAC 7 cut(s) 519, 658, 1434, 1576, 2175, 2660, 2674
Hpy8I GTNNAC 7 cut(s) 519, 658, 1434, 1576, 2175, 2660, 2674
HpyCH4III ACNGT 8 cut(s) 507, 790, 1313, 1354, 1859, 2042, 2387, 2671
HpyCH4IV ACGT 5 cut(s) 245, 888, 1875, 2181, 2656
HpyCH4V TGCA 8 cut(s) 151, 922, 945, 1389, 1454, 1701, 1894, 2291
HpyF10VI GCNNNNNNNGC 4 cut(s) 249, 348, 357, 2458
HpyF3I CTNAG 7 cut(s) 647, 986, 1241, 1519, 1836, 2464, 2692
HpySE526I ACGT 5 cut(s) 245, 888, 1875, 2181, 2656
HspAI GCGC 2 cut(s) 2023, 2121
Ksp22I TGATCA 2 cut(s) 2781, 2823
LmnI GCTCC 3 cut(s) 1636, 2257, 2356
Lsp1109I GCAGC 4 cut(s) 135, 236, 360, 1438
LweI GCATC 3 cut(s) 602, 1238, 2300
MaeII ACGT 5 cut(s) 245, 888, 1875, 2181, 2656
MaeIII GTNAC 6 cut(s) 6, 272, 728, 1069, 1324, 2082
MfeI CAATTG 3 cut(s) 1303, 1901, 1921
MflI RGATCY 7 cut(s) 304, 547, 598, 805, 1215, 2472, 2614
MluI ACGCGT 1 cut(s) 1436
MlyI GAGTC 4 cut(s) 1099, 1537, 1888, 1987
MmeI TCCRAC 5 cut(s) 909, 1626, 2421, 2696, 2797
MseI TTAA 9 cut(s) 380, 623, 831, 1097, 1155, 1169, 2006, 2352, 2808
MslI CAYNNNNRTG 1 cut(s) 29
MspA1I CMGCKG 2 cut(s) 227, 2199
MspCI CTTAAG 2 cut(s) 2351, 2807
MspI CCGG 2 cut(s) 749, 2733
MspR9I CCNGG 3 cut(s) 611, 1466, 2601
MunI CAATTG 3 cut(s) 1303, 1901, 1921
Mva1269I GAATGC 1 cut(s) 2088
MvaI CCWGG 3 cut(s) 611, 1466, 2601
MvnI CGCG 2 cut(s) 1438, 2123
MwoI GCNNNNNNNGC 4 cut(s) 249, 348, 357, 2458
NdeI CATATG 1 cut(s) 2587
NlaIV GGNNCC 4 cut(s) 966, 2127, 2557, 2649
NmeAIII GCCGAG 1 cut(s) 1932
NmuCI GTSAC 3 cut(s) 272, 728, 1324
NspI RCATGY 2 cut(s) 1756, 2461
NspV TTCGAA 1 cut(s) 2050
PaeI GCATGC 1 cut(s) 1756
PaeR7I CTCGAG 1 cut(s) 632
PasI CCCWGGG 1 cut(s) 2600
PctI GAATGC 1 cut(s) 2088
PkrI GCNGC 4 cut(s) 150, 251, 350, 1453
PleI GAGTC 4 cut(s) 1098, 1536, 1887, 1987
PmaCI CACGTG 1 cut(s) 246
PmlI CACGTG 1 cut(s) 246
PpsI GAGTC 4 cut(s) 1098, 1536, 1887, 1987
Ppu21I YACGTR 1 cut(s) 246
PpuMI RGGWCCY 1 cut(s) 2540
PshAI GACNNNNGTC 2 cut(s) 1527, 1878
PsiI TTATAA 2 cut(s) 1161, 2153
Psp5II RGGWCCY 1 cut(s) 2540
Psp6I CCWGG 3 cut(s) 609, 1464, 2599
PspCI CACGTG 1 cut(s) 246
PspFI CCCAGC 1 cut(s) 2559
PspGI CCWGG 3 cut(s) 609, 1464, 2599
PspN4I GGNNCC 4 cut(s) 966, 2127, 2557, 2649
PspPI GGNCC 7 cut(s) 1031, 1103, 1468, 2443, 2540, 2647, 2793
PspPPI RGGWCCY 1 cut(s) 2540
PsrI GAACNNNNNNTAC 2 cut(s) 2548, 2580
PsuI RGATCY 7 cut(s) 304, 547, 598, 805, 1215, 2472, 2614
PvuII CAGCTG 1 cut(s) 227
RsaI GTAC 8 cut(s) 48, 95, 639, 891, 1087, 1145, 1476, 2858
RsaNI GTAC 8 cut(s) 47, 94, 638, 890, 1086, 1144, 1475, 2857
RseI CAYNNNNRTG 1 cut(s) 29
SaqAI TTAA 9 cut(s) 380, 623, 831, 1097, 1155, 1169, 2006, 2352, 2808
SatI GCNGC 4 cut(s) 149, 250, 349, 1452
Sau96I GGNCC 7 cut(s) 1031, 1103, 1468, 2443, 2540, 2647, 2793
ScaI AGTACT 2 cut(s) 48, 2858
SchI GAGTC 4 cut(s) 1099, 1537, 1888, 1987
ScrFI CCNGG 3 cut(s) 611, 1466, 2601
SfaNI GCATC 3 cut(s) 602, 1238, 2300
SfcI CTRYAG 1 cut(s) 1659
Sfr274I CTCGAG 1 cut(s) 632
SfuI TTCGAA 1 cut(s) 2050
SinI GGWCC 4 cut(s) 1031, 1103, 2443, 2540
SlaI CTCGAG 1 cut(s) 632
SmiMI CAYNNNNRTG 1 cut(s) 29
SmlI CTYRAG 5 cut(s) 587, 632, 1934, 2351, 2807
SmoI CTYRAG 5 cut(s) 587, 632, 1934, 2351, 2807
SpeI ACTAGT 3 cut(s) 43, 49, 626
SphI GCATGC 1 cut(s) 1756
SsiI CCGC 4 cut(s) 141, 358, 2123, 2199
SspI AATATT 1 cut(s) 2703
StyD4I CCNGG 3 cut(s) 609, 1464, 2599
StyI CCWWGG 1 cut(s) 1568
TaaI ACNGT 8 cut(s) 507, 790, 1313, 1354, 1859, 2042, 2387, 2671
TaiI ACGT 5 cut(s) 248, 891, 1878, 2184, 2659
TatI WGTACW 2 cut(s) 46, 2856
Tru1I TTAA 9 cut(s) 380, 623, 831, 1097, 1155, 1169, 2006, 2352, 2808
Tru9I TTAA 9 cut(s) 380, 623, 831, 1097, 1155, 1169, 2006, 2352, 2808
TscAI CASTG 4 cut(s) 510, 924, 1333, 2398
TseFI GTSAC 3 cut(s) 272, 728, 1324
TseI GCWGC 4 cut(s) 148, 249, 348, 1451
Tsp45I GTSAC 3 cut(s) 272, 728, 1324
TspGWI ACGGA 1 cut(s) 1866
TspRI CASTG 4 cut(s) 510, 924, 1333, 2398
Vha464I CTTAAG 2 cut(s) 2351, 2807
VpaK11BI GGWCC 4 cut(s) 1031, 1103, 2443, 2540
XbaI TCTAGA 3 cut(s) 1003, 1999, 2057
XceI RCATGY 2 cut(s) 1756, 2461
XcmI CCANNNNNNNNNTGG 4 cut(s) 28, 809, 1113, 1485
XhoI CTCGAG 1 cut(s) 632
XmiI GTMKAC 2 cut(s) 2174, 2673
ZrmI AGTACT 2 cut(s) 48, 2858
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.