Rmu_sc0036789.1_g000001

Leucine rich repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0036789.1
OG0000024
Physical Location & Seq
Reverse (-)
310 .. 2070
1761 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0036789.1_g000001.1.cds

Sequence Viewer

Length: 1761 bp
atgcttttgacccaattagctttgttagatgtacgattcaacaatctccaaggagcaattcccaggtcactgttccagcttaaaagtcttgaatatattttcctcaactcaaataacttgagtggatatgttcaattcgatgagttttccaagctcaaaaggttgaggggacttcgtttgtcgctcaacaagttatctgtgcagatcaaaattggatttactgctattcttccaaagcttaatttactagaattgggttcatgcaacttgacagagtttccggaatttttgaaattcactagtgaactgatgcatctagatctatctgacaacaatcttcatggccaaataccaaaatggatgtggaattcaactagtgaaacgttgagatacctcaacctctctcacaaccacttaactggatttgaagaaaattcgatcatgattccatggcatcggttaagctctttacagctagactctaacatgttacgaggatcactgccaattccagggctgtcaatggcagtctattctgtttcaaacaatgaatatgaaggagaaattccagcaacattctgtaatgcggggacgctaactattcttgatttgtctaacaacaacctgaatggcatgattcctcaatgttttgagaatttcggagctcttcagatattgaaactgcggaacaattcttttcacggagatattcctcaaatatgttcaaacagatgtacggagttggcagcgattgacttgagttataatcagctacaagggaagctaccaagatcaattgctaattgtcctcagttgatgtttcttaatttgggaaataatcagatcagtgataccttcccctcttggttaggagtgcttcaacagttaaaaattctcattttgcggtccaatatatttcatggcataattggaaagcctgcaagtagccatgagttccctaagctgtccatcattgatttatctagcaatgatttttcaggtctgttgccctccaactacttagagaactggaatgccatgaaatttgttgatgaaaacgagcaaatatacgtccaatccgctgtcatcttcgggatgtatccagacacgttccactatgattacccgattacagtttttagcaaaggtattcaattgaagtatttcaagaccccttatcttctgagactcatagacctctcaagtaacaaatttgaaggagagattccaggtatcattgggaatctaagagggcttcatttgctcaatctttgcaacaacactctcactggtcccatcccctcatctttggggaacttgactgctcttgaatcattggatctctccctaaatcagctctcaggaaagatccccggtgatctagcacaactgacattccttgcatacttcaatgtatcccacaatcgtctctatggttcaatcccacaaggtcgacagtttgatacattccaagaggatatgtaccgaggaaactcaggtttgtgtggaaaacctttgtcaaagaaatgtgaggattctgagagcgcaacaccacaaacaaactttcaacaagaccaagactctgggtttcaaattgagctagattggtttgtggtgctgccaggagttgttactggtctaatagttggagtggttggggaaaacttttggacagccaagaagcatgattggtttataaaggcattcagcaggaggagggagccgagaagcacaaggcggaggaggggactcagaacttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

586

Amino Acids

66.23

Weight (kDa)

7.17

Isoelectric Point (pI)

39.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 765, 1697
AccI GTMKAC 1 cut(s) 1453
AccIII TCCGGA 1 cut(s) 280
AciI CCGC 5 cut(s) 587, 685, 904, 1080, 1738
AclI AACGTT 1 cut(s) 383
AclWI GGATC 3 cut(s) 505, 1347, 1363
AcoI YGGCCR 1 cut(s) 343
AcsI RAATTY 9 cut(s) 284, 293, 367, 433, 564, 655, 891, 1043, 1211
AcuI CTGAAG 1 cut(s) 653
AfaI GTAC 3 cut(s) 33, 736, 1484
AfiI CCNNNNNNNGG 1 cut(s) 512
AflIII ACRYGT 2 cut(s) 486, 1107
AhlI ACTAGT 2 cut(s) 299, 374
AjnI CCWGG 4 cut(s) 62, 511, 1228, 1621
AjuI GAANNNNNNNTTGG 2 cut(s) 42, 74
Alw21I GWGCWC 1 cut(s) 667
Alw26I GTCTC 2 cut(s) 1180, 1433
AlwI GGATC 3 cut(s) 505, 1347, 1363
Aor13HI TCCGGA 1 cut(s) 280
AoxI GGCC 1 cut(s) 343
ApeKI GCWGC 2 cut(s) 746, 1618
ApoI RAATTY 9 cut(s) 284, 293, 367, 433, 564, 655, 891, 1043, 1211
Asp700I GAANNNNTTC 1 cut(s) 1163
AspLEI GCGC 1 cut(s) 1547
AspS9I GGNCC 2 cut(s) 906, 1292
AsuC2I CCSGG 1 cut(s) 1374
AsuHPI GGTGA 1 cut(s) 1388
AvaII GGWCC 2 cut(s) 906, 1292
BalI TGGCCA 1 cut(s) 345
BanII GRGCYC 1 cut(s) 667
Bbv12I GWGCWC 1 cut(s) 667
BbvI GCAGC 2 cut(s) 758, 1605
BccI CCATC 2 cut(s) 977, 1304
BciT130I CCWGG 4 cut(s) 64, 513, 1230, 1623
BciVI GTATCC 2 cut(s) 1110, 1426
BcnI CCSGG 1 cut(s) 1374
BcoDI GTCTC 2 cut(s) 1180, 1433
BcuI ACTAGT 2 cut(s) 299, 374
BfaI CTAG 8 cut(s) 248, 300, 317, 375, 476, 984, 1382, 1601
BfuI GTATCC 2 cut(s) 1110, 1426
BglII AGATCT 1 cut(s) 319
BisI GCNGC 2 cut(s) 747, 1619
BlsI GCNGC 2 cut(s) 748, 1620
Bme1390I CCNGG 5 cut(s) 64, 513, 1230, 1374, 1623
Bme18I GGWCC 2 cut(s) 906, 1292
BmgT120I GGNCC 2 cut(s) 906, 1292
BmiI GGNNCC 2 cut(s) 1294, 1722
BmrFI CCNGG 5 cut(s) 64, 513, 1230, 1374, 1623
BmsI GCATC 3 cut(s) 300, 322, 463
Bpu10I CCTNAGC 1 cut(s) 960
BpuEI CTTGAG 3 cut(s) 139, 778, 1186
BpuMI CCSGG 1 cut(s) 1374
BsaJI CCNNGG 6 cut(s) 49, 62, 449, 512, 1372, 1486
BsaWI WCCGGW 1 cut(s) 280
Bsc4I CCNNNNNNNGG 1 cut(s) 512
Bse1I ACTGG 4 cut(s) 424, 1034, 1294, 1639
Bse3DI GCAATG 1 cut(s) 994
BseAI TCCGGA 1 cut(s) 280
BseBI CCWGG 4 cut(s) 64, 513, 1230, 1623
BseDI CCNNGG 6 cut(s) 49, 62, 449, 512, 1372, 1486
BseGI GGATG 3 cut(s) 366, 1101, 1296
BseLI CCNNNNNNNGG 1 cut(s) 512
BseMI GCAATG 1 cut(s) 994
BseMII CTCAG 5 cut(s) 824, 1175, 1374, 1509, 1530
BseNI ACTGG 4 cut(s) 424, 1034, 1294, 1639
BseRI GAGGAG 2 cut(s) 1729, 1756
BseXI GCAGC 2 cut(s) 758, 1605
BsgI GTGCAG 1 cut(s) 221
BshFI GGCC 1 cut(s) 345
BsiHKAI GWGCWC 1 cut(s) 667
BsiSI CCGG 2 cut(s) 281, 1374
BslFI GGGAC 3 cut(s) 183, 604, 1278
BslI CCNNNNNNNGG 1 cut(s) 512
BsmAI GTCTC 2 cut(s) 1180, 1433
BsmBI CGTCTC 1 cut(s) 1433
BsmFI GGGAC 3 cut(s) 183, 604, 1278
BsmI GAATGC 2 cut(s) 1039, 1703
BsnI GGCC 1 cut(s) 345
Bsp1286I GDGCHC 1 cut(s) 667
Bsp13I TCCGGA 1 cut(s) 280
Bsp143I GATC 9 cut(s) 204, 319, 438, 497, 791, 843, 1339, 1368, 1378
Bsp19I CCATGG 1 cut(s) 449
BspACI CCGC 5 cut(s) 587, 685, 904, 1080, 1738
BspANI GGCC 1 cut(s) 345
BspCNI CTCAG 5 cut(s) 823, 1176, 1373, 1508, 1531
BspEI TCCGGA 1 cut(s) 280
BspHI TCATGA 1 cut(s) 441
BspLI GGNNCC 2 cut(s) 1294, 1722
BspPI GGATC 3 cut(s) 505, 1347, 1363
BspQI GCTCTTC 1 cut(s) 672
BsrDI GCAATG 1 cut(s) 994
BsrI ACTGG 4 cut(s) 424, 1034, 1294, 1639
BssECI CCNNGG 6 cut(s) 49, 62, 449, 512, 1372, 1486
BssMI GATC 9 cut(s) 204, 319, 438, 497, 791, 843, 1339, 1368, 1378
BssT1I CCWWGG 2 cut(s) 49, 449
Bst2UI CCWGG 4 cut(s) 64, 513, 1230, 1623
Bst4CI ACNGT 4 cut(s) 72, 885, 1135, 1458
Bst6I CTCTTC 1 cut(s) 672
BstC8I GCNNGC 1 cut(s) 939
BstDSI CCRYGG 1 cut(s) 449
BstF5I GGATG 3 cut(s) 366, 1101, 1296
BstHHI GCGC 1 cut(s) 1547
BstKTI GATC 9 cut(s) 207, 322, 441, 500, 794, 846, 1342, 1371, 1381
BstMAI GTCTC 2 cut(s) 1180, 1433
BstMBI GATC 9 cut(s) 204, 319, 438, 497, 791, 843, 1339, 1368, 1378
BstMWI GCNNNNNNNGC 1 cut(s) 1261
BstNI CCWGG 4 cut(s) 64, 513, 1230, 1623
BstNSI RCATGY 1 cut(s) 490
BstSCI CCNGG 5 cut(s) 62, 511, 1228, 1372, 1621
BstV1I GCAGC 2 cut(s) 758, 1605
BstX2I RGATCY 3 cut(s) 319, 1339, 1368
BstXI CCANNNNNNTGG 2 cut(s) 419, 1583
BstYI RGATCY 3 cut(s) 319, 1339, 1368
BsuI GTATCC 2 cut(s) 1110, 1426
BsuRI GGCC 1 cut(s) 345
BtgI CCRYGG 1 cut(s) 449
BtsCI GGATG 3 cut(s) 366, 1101, 1296
BtsI GCAGTG 1 cut(s) 500
BtsIMutI CAGTG 4 cut(s) 68, 500, 853, 1287
Cac8I GCNNGC 1 cut(s) 939
CciI TCATGA 1 cut(s) 441
CfoI GCGC 1 cut(s) 1547
Cfr13I GGNCC 2 cut(s) 906, 1292
CseI GACGC 1 cut(s) 601
Csp6I GTAC 3 cut(s) 32, 735, 1483
CviQI GTAC 3 cut(s) 32, 735, 1483
DpnI GATC 9 cut(s) 206, 321, 440, 499, 793, 845, 1341, 1370, 1380
DpnII GATC 9 cut(s) 204, 319, 438, 497, 791, 843, 1339, 1368, 1378
EaeI YGGCCR 1 cut(s) 343
Eam1104I CTCTTC 1 cut(s) 672
EarI CTCTTC 1 cut(s) 672
EciI GGCGGA 1 cut(s) 1753
Ecl136II GAGCTC 1 cut(s) 665
Eco130I CCWWGG 2 cut(s) 49, 449
Eco24I GRGCYC 1 cut(s) 667
Eco47I GGWCC 2 cut(s) 906, 1292
Eco53kI GAGCTC 1 cut(s) 665
Eco57I CTGAAG 1 cut(s) 653
EcoICRI GAGCTC 1 cut(s) 665
EcoRI GAATTC 1 cut(s) 367
EcoRII CCWGG 4 cut(s) 62, 511, 1228, 1621
EcoT14I CCWWGG 2 cut(s) 49, 449
EcoT22I ATGCAT 1 cut(s) 315
EcoT38I GRGCYC 1 cut(s) 667
ErhI CCWWGG 2 cut(s) 49, 449
Esp3I CGTCTC 1 cut(s) 1433
FaqI GGGAC 3 cut(s) 183, 604, 1278
FauI CCCGC 1 cut(s) 580
FblI GTMKAC 1 cut(s) 1453
Fnu4HI GCNGC 2 cut(s) 747, 1619
FokI GGATG 3 cut(s) 373, 1108, 1283
FriOI GRGCYC 1 cut(s) 667
Fsp4HI GCNGC 2 cut(s) 747, 1619
FspBI CTAG 8 cut(s) 248, 300, 317, 375, 476, 984, 1382, 1601
GlaI GCGC 1 cut(s) 1546
GluI GCNGC 2 cut(s) 747, 1619
HaeIII GGCC 1 cut(s) 345
HapII CCGG 2 cut(s) 281, 1374
HgaI GACGC 1 cut(s) 601
HhaI GCGC 1 cut(s) 1547
Hin6I GCGC 1 cut(s) 1545
HinP1I GCGC 1 cut(s) 1545
HincII GTYRAC 1 cut(s) 1454
HindII GTYRAC 1 cut(s) 1454
HindIII AAGCTT 1 cut(s) 236
HpaII CCGG 2 cut(s) 281, 1374
HphI GGTGA 1 cut(s) 1388
Hpy166II GTNNAC 2 cut(s) 305, 1454
Hpy188I TCNGA 7 cut(s) 328, 662, 672, 843, 1185, 1540, 1754
Hpy8I GTNNAC 2 cut(s) 305, 1454
HpyAV CCTTC 3 cut(s) 551, 865, 1211
HpyCH4III ACNGT 4 cut(s) 72, 885, 1135, 1458
HpyCH4IV ACGT 3 cut(s) 383, 1071, 1109
HpyCH4V TGCA 6 cut(s) 202, 264, 313, 941, 1275, 1403
HpyF10VI GCNNNNNNNGC 1 cut(s) 1261
HpySE526I ACGT 3 cut(s) 383, 1071, 1109
HspAI GCGC 1 cut(s) 1545
Kpn2I TCCGGA 1 cut(s) 280
Kzo9I GATC 9 cut(s) 204, 319, 438, 497, 791, 843, 1339, 1368, 1378
LguI GCTCTTC 1 cut(s) 672
LmnI GCTCC 3 cut(s) 53, 662, 1720
Lsp1109I GCAGC 2 cut(s) 758, 1605
LweI GCATC 3 cut(s) 300, 322, 463
MaeI CTAG 8 cut(s) 248, 300, 317, 375, 476, 984, 1382, 1601
MaeII ACGT 3 cut(s) 383, 1071, 1109
MaeIII GTNAC 4 cut(s) 66, 489, 1205, 1630
MalI GATC 9 cut(s) 206, 321, 440, 499, 793, 845, 1341, 1370, 1380
MboI GATC 9 cut(s) 204, 319, 438, 497, 791, 843, 1339, 1368, 1378
MboII GAAGA 6 cut(s) 221, 329, 440, 659, 1081, 1172
MfeI CAATTG 2 cut(s) 795, 1154
MflI RGATCY 3 cut(s) 319, 1339, 1368
MhlI GDGCHC 1 cut(s) 667
MlsI TGGCCA 1 cut(s) 345
MluNI TGGCCA 1 cut(s) 345
MlyI GAGTC 4 cut(s) 473, 1182, 1574, 1743
MmeI TCCRAC 2 cut(s) 1038, 1627
Mox20I TGGCCA 1 cut(s) 345
Mph1103I ATGCAT 1 cut(s) 315
MroI TCCGGA 1 cut(s) 280
MroXI GAANNNNTTC 1 cut(s) 1163
MscI TGGCCA 1 cut(s) 345
MseI TTAA 6 cut(s) 81, 240, 416, 461, 825, 887
Msp20I TGGCCA 1 cut(s) 345
MspA1I CMGCKG 1 cut(s) 1082
MspI CCGG 2 cut(s) 281, 1374
MspR9I CCNGG 5 cut(s) 64, 513, 1230, 1374, 1623
MunI CAATTG 2 cut(s) 795, 1154
Mva1269I GAATGC 2 cut(s) 1039, 1703
MvaI CCWGG 4 cut(s) 64, 513, 1230, 1623
MwoI GCNNNNNNNGC 1 cut(s) 1261
NciI CCSGG 1 cut(s) 1374
NcoI CCATGG 1 cut(s) 449
NdeII GATC 9 cut(s) 204, 319, 438, 497, 791, 843, 1339, 1368, 1378
NlaIV GGNNCC 2 cut(s) 1294, 1722
NmeAIII GCCGAG 1 cut(s) 1749
NmuCI GTSAC 1 cut(s) 66
NsiI ATGCAT 1 cut(s) 315
NspI RCATGY 1 cut(s) 490
PagI TCATGA 1 cut(s) 441
PciI ACATGT 1 cut(s) 486
PciSI GCTCTTC 1 cut(s) 672
PctI GAATGC 2 cut(s) 1039, 1703
PdmI GAANNNNTTC 1 cut(s) 1163
PfeI GAWTC 7 cut(s) 36, 445, 637, 1225, 1243, 1331, 1535
PkrI GCNGC 2 cut(s) 748, 1620
PleI GAGTC 4 cut(s) 473, 1182, 1574, 1743
PpsI GAGTC 4 cut(s) 473, 1182, 1574, 1743
PscI ACATGT 1 cut(s) 486
PsiI TTATAA 2 cut(s) 765, 1697
Psp124BI GAGCTC 1 cut(s) 667
Psp1406I AACGTT 1 cut(s) 383
Psp6I CCWGG 4 cut(s) 62, 511, 1228, 1621
PspGI CCWGG 4 cut(s) 62, 511, 1228, 1621
PspN4I GGNNCC 2 cut(s) 1294, 1722
PspPI GGNCC 2 cut(s) 906, 1292
PsuI RGATCY 3 cut(s) 319, 1339, 1368
RsaI GTAC 3 cut(s) 33, 736, 1484
RsaNI GTAC 3 cut(s) 32, 735, 1483
SacI GAGCTC 1 cut(s) 667
SalI GTCGAC 1 cut(s) 1452
SapI GCTCTTC 1 cut(s) 672
SaqAI TTAA 6 cut(s) 81, 240, 416, 461, 825, 887
SatI GCNGC 2 cut(s) 747, 1619
Sau3AI GATC 9 cut(s) 204, 319, 438, 497, 791, 843, 1339, 1368, 1378
Sau96I GGNCC 2 cut(s) 906, 1292
SchI GAGTC 4 cut(s) 473, 1182, 1574, 1743
ScrFI CCNGG 5 cut(s) 64, 513, 1230, 1374, 1623
SduI GDGCHC 1 cut(s) 667
SfaNI GCATC 3 cut(s) 300, 322, 463
SinI GGWCC 2 cut(s) 906, 1292
SmlI CTYRAG 3 cut(s) 118, 757, 1201
SmoI CTYRAG 3 cut(s) 118, 757, 1201
SpeI ACTAGT 2 cut(s) 299, 374
SsiI CCGC 5 cut(s) 587, 685, 904, 1080, 1738
SspMI CTAG 8 cut(s) 248, 300, 317, 375, 476, 984, 1382, 1601
SstI GAGCTC 1 cut(s) 667
StyD4I CCNGG 5 cut(s) 62, 511, 1228, 1372, 1621
StyI CCWWGG 2 cut(s) 49, 449
TaaI ACNGT 4 cut(s) 72, 885, 1135, 1458
TaiI ACGT 3 cut(s) 386, 1074, 1112
TaqI TCGA 3 cut(s) 138, 437, 1453
TfiI GAWTC 7 cut(s) 36, 445, 637, 1225, 1243, 1331, 1535
Tru1I TTAA 6 cut(s) 81, 240, 416, 461, 825, 887
Tru9I TTAA 6 cut(s) 81, 240, 416, 461, 825, 887
TscAI CASTG 4 cut(s) 75, 507, 853, 1294
TseFI GTSAC 1 cut(s) 66
TseI GCWGC 2 cut(s) 746, 1618
Tsp45I GTSAC 1 cut(s) 66
TspDTI ATGAA 8 cut(s) 249, 329, 564, 570, 908, 1055, 1068, 1247
TspGWI ACGGA 2 cut(s) 717, 752
TspRI CASTG 4 cut(s) 75, 507, 853, 1294
VpaK11BI GGWCC 2 cut(s) 906, 1292
XapI RAATTY 9 cut(s) 284, 293, 367, 433, 564, 655, 891, 1043, 1211
XbaI TCTAGA 1 cut(s) 316
XceI RCATGY 1 cut(s) 490
XcmI CCANNNNNNNNNTGG 1 cut(s) 360
XmiI GTMKAC 1 cut(s) 1453
XmnI GAANNNNTTC 1 cut(s) 1163
XspI CTAG 8 cut(s) 248, 300, 317, 375, 476, 984, 1382, 1601
Zsp2I ATGCAT 1 cut(s) 315
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.