Rmu_sc0001444.1_g000008

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001444.1
OG0000024
Physical Location & Seq
Reverse (-)
24676 .. 27783
3108 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001444.1_g000008.1.cds

Sequence Viewer

Length: 3108 bp
atgtttatcctttcaaaatttgtctggtcacatcttgtcgtggctgactctttgcagtcatatactcctccttgccatgatgatgagatctctgccttactgcaattcaagcaaagctttgtcatcaagatgtctgcttcaagttatgagggtgcttatccaaagatttcttcatggaaatcaaacagcaattgttgctcatgggacgggatcgagtgcgatgaggagactcatcatgtgattggacttgatcttagtagcagttatctctatggctctatcaactccaacaacaccatcttccgccttgttcatcttgagagcctcaaccttgctgacaatgattttgatttctctcaaattcctcataccattaggaagtttccaaagctcaggtatctcaacttctctttctctggcttttctggtcaagtcccgtctgaagtttcacaattgaccaagttgtcatcccttgatctatctcaaaatattgacatgttttctaatgatgaattgttaagaagcttagctcaaaatttaactggcctacaaacacttgatctttctaatattaacatatcatccacggtacctaataccttggccaatttctcacatttgacatccctcgtcctaatttcatgcaacatgtttggcaaattaccattttctcttggtaatctcagacatctcatttatttgtacctttcatttaatgagttcaatggccaaattccttcttcatttgtgaatcttacccaactcacacgtctttcacttcggcagaaccatattagtggcactatcccatgttttttcggaaatcttacccaactcacatatctttcacttggggaaaaccatattaatggcactatcccatgttttttcggaaatcttacccagcttgcaacacttcgtcttgattcaaatcaattatctggtccaatcccatctagtctaggtaatcttggcaaactcacatatctttcacttgggcagaaccatattagtggcactatcccatgttttttcggaaatcttacccagcttgcaacacttcttcttgattcaaatcaattatctggtccaatcccatgtagtctaggtaatcttcgcaaactcacatatctttcactttggcataatcatattagtggcactatcccatgttttttcggaaatcttacccaactcacatatctttcacttggggagaaccatattaatggcactatcccatgtttttttggaaatcttacccagcttgcaacacttcgtcttaattcaaatcaattatctggttcaatcccatcttgtctaggtaatcttcgcaaacttactgttttagatcttaatttcaataaatttcagagagagattcctgagtcattattcaatgtagcaagtctcgagagacttcttctagcttataataatctcagtggtagagtggagttcctcaaacttcttaagctaccaaatttagagtgggtcgatctatctggtaacagcttggatgtgatcactgaaaccaaaactatgaatgcatctagcattgcaaggttagagtatctaggattgggttcgtgcaacataagtgagttcccaaatttcttaagatatcaaaatacattaatgtacttgaacctttctgggaacggaatgcatggccaagtaccaaaatggatgtggaacacgagcagagagtctttggggttcttggacatttctcataacctcctttcaggctttgaccagcctccagttgtccttccctgggttggactagaggggctagatctttcgttcaacaagcttagtggcccaatgttggtaccttcgttacaatccctgatgttctatcacatttcaaacaacaaattaactggagaaatttcacctttgatttgtaatgccagttctcttatttcccttgatgtgtcaagtaaccatttgagtggtatgcttccgcggtgtctacaaaacttcagaagtaatcttcaagttttaagtgttgcaaacaactattttcatggcactcttcctcgtataggcaccaatggaagcgatttgatcatgattgatgtcagtcgtaaccaactgcaggggaaattaccgaggtcattggtgaattgtttaagcctcgagtctctcgttctgtctagcaataagttcgatgatgtattccccgtttggttgggaactcttccggaattaaaagttttggcaatgaggaatagtgggttccacggtgctattccgagatatcaaagcaatcacgatggtttccccaatttgcgcatccttgatctgtctcaaaataattttactggtcagtttgcatttgaatccatcctctctggaaaatcaatgagaggtatccatctaaacggatcggcgtacatgaaagcatttggactcaagtcttataaaggcggcgaccgtgataggtattatacagctagttacagatttgagtactcaatcacgctgatgaataaaggtttagagagatatttccaaaagattcgcgaagactttatggccatcgatctgtcgagcaatagatttgaaggcaagattccagaattttttgggaacctaaaggggattcgctcacttaatgtatccagtaacattctaagtggccgcatccaaccatccttgggaaacttgacaaatcttgaagctttggacctttcacataacaaattcttgggtgagctccctccatcactgttgcagctttcatccctccaaattttcagcgtctcgcacaacaatctcacaggtcaaataccggttggaaaccagtttaataccttcgacaaaacttcgtatgagggaaacccaggtttgtgtggatttccattgccaaagaaatgttcacgttctggggaggggcctgaacttccaccttcaacagcagaagaagaagatggagttgaattggattggaaatttgctgcggcggggttagtaagtgggttggtggtgggagtggttcttgcagactttgtgatcacgaggttcagtgagcggttcattgagattgttgcatttctgatcagactgatgaaaaggatgagaaggcccagaagttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8

Protein Analysis

1035

Amino Acids

115.1

Weight (kDa)

7.31

Isoelectric Point (pI)

38.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1434, 2433
AasI GACNNNNNNGTC 1 cut(s) 463
Acc16I TGCGCA 1 cut(s) 2303
Acc65I GGTACC 2 cut(s) 589, 1837
AccB1I GGYRCC 3 cut(s) 589, 1837, 2057
AccBSI CCGCTC 1 cut(s) 3043
AccI GTMKAC 1 cut(s) 1981
AccII CGCG 2 cut(s) 1975, 2535
AccIII TCCGGA 1 cut(s) 2212
AciI CCGC 8 cut(s) 304, 1973, 1975, 2439, 2653, 2972, 2975, 3043
AclWI GGATC 2 cut(s) 218, 2404
AcoI YGGCCR 5 cut(s) 603, 727, 1672, 2547, 2650
AcuI CTGAAG 2 cut(s) 462, 1975
AfaI GTAC 7 cut(s) 591, 704, 1643, 1680, 1839, 2405, 2483
AfiI CCNNNNNNNGG 6 cut(s) 1780, 1784, 1834, 2054, 2107, 2669
AflII CTTAAG 2 cut(s) 1472, 1618
AflIII ACRYGT 3 cut(s) 495, 648, 767
AgeI ACCGGT 1 cut(s) 2803
AjiI CACGTC 1 cut(s) 770
AjnI CCWGG 2 cut(s) 1778, 2854
AjuI GAANNNNNNNTTGG 4 cut(s) 154, 186, 2872, 2904
Alw21I GWGCWC 1 cut(s) 2730
Alw26I GTCTC 6 cut(s) 221, 1411, 1415, 2157, 2322, 2779
AlwI GGATC 2 cut(s) 218, 2404
Ama87I CYCGRG 2 cut(s) 1412, 2147
Aor13HI TCCGGA 1 cut(s) 2212
AoxI GGCC 9 cut(s) 544, 603, 727, 1672, 1825, 2547, 2650, 2906, 3095
ApeKI GCWGC 2 cut(s) 2746, 2969
ArsI GACNNNNNNTTYG 2 cut(s) 329, 361
AseI ATTAAT 3 cut(s) 867, 1227, 1637
AsiGI ACCGGT 1 cut(s) 2803
Asp718I GGTACC 2 cut(s) 589, 1837
AspLEI GCGC 1 cut(s) 2304
AspS9I GGNCC 6 cut(s) 944, 1088, 1826, 2698, 2906, 3096
AsuHPI GGTGA 3 cut(s) 1893, 2143, 2735
AvaI CYCGRG 2 cut(s) 1412, 2147
AvaII GGWCC 3 cut(s) 944, 1088, 2698
BaeI ACNNNNGTAYC 2 cut(s) 1829, 1862
BalI TGGCCA 4 cut(s) 605, 729, 1674, 2549
BanI GGYRCC 3 cut(s) 589, 1837, 2057
BanII GRGCYC 1 cut(s) 2730
BarI GAAGNNNNNNTAC 2 cut(s) 389, 421
BauI CACGAG 2 cut(s) 1699, 3028
BbsI GAAGAC 1 cut(s) 2544
Bbv12I GWGCWC 1 cut(s) 2730
BbvI GCAGC 2 cut(s) 2758, 2956
BcgI CGANNNNNNTGC 2 cut(s) 2158, 2192
BciT130I CCWGG 2 cut(s) 1780, 2856
BciVI GTATCC 2 cut(s) 2393, 2641
BclI TGATCA 4 cut(s) 1524, 2076, 3024, 3069
BcoDI GTCTC 6 cut(s) 221, 1411, 1415, 2157, 2322, 2779
BfmI CTRYAG 1 cut(s) 2105
BfrI CTTAAG 2 cut(s) 1472, 1618
BfuI GTATCC 2 cut(s) 2393, 2641
BglII AGATCT 3 cut(s) 87, 1351, 1801
BisI GCNGC 5 cut(s) 2440, 2653, 2747, 2970, 2973
BlpI GCTNAGC 1 cut(s) 526
BlsI GCNGC 5 cut(s) 2441, 2654, 2748, 2971, 2974
BmcAI AGTACT 1 cut(s) 2483
Bme1390I CCNGG 2 cut(s) 1780, 2856
Bme18I GGWCC 3 cut(s) 944, 1088, 2698
BmeT110I CYCGRG 2 cut(s) 1412, 2147
BmgBI CACGTC 1 cut(s) 770
BmgT120I GGNCC 6 cut(s) 944, 1088, 1826, 2698, 2906, 3096
BmiI GGNNCC 6 cut(s) 591, 1839, 2059, 2249, 2603, 2907
BmrFI CCNGG 2 cut(s) 1780, 2856
BmsI GCATC 3 cut(s) 1559, 2313, 2664
BoxI GACNNNNGTC 1 cut(s) 2425
BpiI GAAGAC 1 cut(s) 2544
BpmI CTGGAG 2 cut(s) 1749, 1911
Bpu10I CCTNAGC 1 cut(s) 392
Bpu1102I GCTNAGC 1 cut(s) 526
BpuEI CTTGAG 2 cut(s) 338, 2408
Bsa29I ATCGAT 1 cut(s) 2553
BsaBI GATNNNNATC 2 cut(s) 930, 1074
BsaJI CCNNGG 9 cut(s) 585, 600, 1778, 1779, 1973, 2120, 2251, 2667, 2854
BsaWI WCCGGW 2 cut(s) 2212, 2803
Bsc4I CCNNNNNNNGG 6 cut(s) 1780, 1784, 1834, 2054, 2107, 2669
Bse118I RCCGGY 1 cut(s) 2803
Bse1I ACTGG 7 cut(s) 547, 1766, 1894, 1920, 2338, 2634, 2815
Bse3DI GCAATG 3 cut(s) 1557, 2238, 2873
Bse8I GATNNNNATC 2 cut(s) 930, 1074
BseAI TCCGGA 1 cut(s) 2212
BseBI CCWGG 2 cut(s) 1780, 2856
BseCI ATCGAT 1 cut(s) 2553
BseDI CCNNGG 9 cut(s) 585, 600, 1778, 1779, 1973, 2120, 2251, 2667, 2854
BseJI GATNNNNATC 2 cut(s) 930, 1074
BseLI CCNNNNNNNGG 6 cut(s) 1780, 1784, 1834, 2054, 2107, 2669
BseMI GCAATG 3 cut(s) 1557, 2238, 2873
BseMII CTCAG 4 cut(s) 406, 697, 1377, 1456
BseNI ACTGG 7 cut(s) 547, 1766, 1894, 1920, 2338, 2634, 2815
BseRI GAGGAG 2 cut(s) 57, 239
BseXI GCAGC 2 cut(s) 2758, 2956
BseYI CCCAGC 3 cut(s) 903, 1047, 1263
Bsh1236I CGCG 2 cut(s) 1975, 2535
Bsh1285I CGRYCG 1 cut(s) 2446
BshFI GGCC 9 cut(s) 546, 605, 729, 1674, 1827, 2549, 2652, 2908, 3097
BshNI GGYRCC 3 cut(s) 589, 1837, 2057
BshTI ACCGGT 1 cut(s) 2803
BshVI ATCGAT 1 cut(s) 2553
BsiEI CGRYCG 1 cut(s) 2446
BsiHKAI GWGCWC 1 cut(s) 2730
BsiHKCI CYCGRG 2 cut(s) 1412, 2147
BsiSI CCGG 2 cut(s) 2213, 2804
BslFI GGGAC 2 cut(s) 218, 419
BslI CCNNNNNNNGG 6 cut(s) 1780, 1784, 1834, 2054, 2107, 2669
BsmAI GTCTC 6 cut(s) 221, 1411, 1415, 2157, 2322, 2779
BsmBI CGTCTC 1 cut(s) 2779
BsmFI GGGAC 2 cut(s) 218, 419
BsmI GAATGC 2 cut(s) 1552, 1671
BsnI GGCC 9 cut(s) 546, 605, 729, 1674, 1827, 2549, 2652, 2908, 3097
BsoBI CYCGRG 2 cut(s) 1412, 2147
Bsp1286I GDGCHC 1 cut(s) 2730
Bsp13I TCCGGA 1 cut(s) 2212
Bsp1720I GCTNAGC 1 cut(s) 526
Bsp68I TCGCGA 1 cut(s) 2535
BspACI CCGC 8 cut(s) 304, 1973, 1975, 2439, 2653, 2972, 2975, 3043
BspANI GGCC 9 cut(s) 546, 605, 729, 1674, 1827, 2549, 2652, 2908, 3097
BspCNI CTCAG 4 cut(s) 405, 696, 1378, 1455
BspDI ATCGAT 1 cut(s) 2553
BspEI TCCGGA 1 cut(s) 2212
BspFNI CGCG 2 cut(s) 1975, 2535
BspHI TCATGA 1 cut(s) 2079
BspLI GGNNCC 6 cut(s) 591, 1839, 2059, 2249, 2603, 2907
BspMAI CTGCAG 1 cut(s) 2109
BspPI GGATC 2 cut(s) 218, 2404
BspT107I GGYRCC 3 cut(s) 589, 1837, 2057
BspTI CTTAAG 2 cut(s) 1472, 1618
BsrBI CCGCTC 1 cut(s) 3043
BsrDI GCAATG 3 cut(s) 1557, 2238, 2873
BsrFI RCCGGY 1 cut(s) 2803
BsrI ACTGG 7 cut(s) 547, 1766, 1894, 1920, 2338, 2634, 2815
BssAI RCCGGY 1 cut(s) 2803
BssECI CCNNGG 9 cut(s) 585, 600, 1778, 1779, 1973, 2120, 2251, 2667, 2854
BssSI CACGAG 2 cut(s) 1699, 3028
BssT1I CCWWGG 2 cut(s) 600, 2667
Bst2BI CACGAG 2 cut(s) 1699, 3028
Bst2UI CCWGG 2 cut(s) 1780, 2856
Bst4CI ACNGT 5 cut(s) 589, 1345, 2255, 2447, 2742
Bst6I CTCTTC 2 cut(s) 2049, 2214
BstAFI CTTAAG 2 cut(s) 1472, 1618
BstAPI GCANNNNNTGC 1 cut(s) 195
BstC8I GCNNGC 3 cut(s) 909, 1053, 1269
BstDEI CTNAG 8 cut(s) 254, 392, 526, 683, 1386, 1442, 1820, 2645
BstDSI CCRYGG 3 cut(s) 585, 1973, 2251
BstENI CCTNNNNNAGG 1 cut(s) 2052
BstFNI CGCG 2 cut(s) 1975, 2535
BstHHI GCGC 1 cut(s) 2304
BstMAI GTCTC 6 cut(s) 221, 1411, 1415, 2157, 2322, 2779
BstMCI CGRYCG 1 cut(s) 2446
BstMWI GCNNNNNNNGC 2 cut(s) 109, 195
BstNI CCWGG 2 cut(s) 1780, 2856
BstNSI RCATGY 2 cut(s) 499, 652
BstPAI GACNNNNGTC 1 cut(s) 2425
BstSCI CCNGG 2 cut(s) 1778, 2854
BstSFI CTRYAG 1 cut(s) 2105
BstUI CGCG 2 cut(s) 1975, 2535
BstV1I GCAGC 2 cut(s) 2758, 2956
BstV2I GAAGAC 1 cut(s) 2544
BstX2I RGATCY 3 cut(s) 87, 1351, 1801
BstXI CCANNNNNNTGG 5 cut(s) 797, 869, 1013, 1229, 1961
BstYI RGATCY 3 cut(s) 87, 1351, 1801
Bsu15I ATCGAT 1 cut(s) 2553
BsuI GTATCC 2 cut(s) 2393, 2641
BsuRI GGCC 9 cut(s) 546, 605, 729, 1674, 1827, 2549, 2652, 2908, 3097
BsuTUI ATCGAT 1 cut(s) 2553
BtgI CCRYGG 3 cut(s) 585, 1973, 2251
BtgZI GCGATG 1 cut(s) 234
BtrI CACGTC 1 cut(s) 770
BtsIMutI CAGTG 4 cut(s) 1450, 1527, 2738, 3043
BtuMI TCGCGA 1 cut(s) 2535
Cac8I GCNNGC 3 cut(s) 909, 1053, 1269
CciI TCATGA 1 cut(s) 2079
CfoI GCGC 1 cut(s) 2304
Cfr10I RCCGGY 1 cut(s) 2803
Cfr13I GGNCC 6 cut(s) 944, 1088, 1826, 2698, 2906, 3096
Cfr42I CCGCGG 1 cut(s) 1976
ClaI ATCGAT 1 cut(s) 2553
CseI GACGC 1 cut(s) 2761
Csp6I GTAC 7 cut(s) 590, 703, 1642, 1679, 1838, 2404, 2482
CspAI ACCGGT 1 cut(s) 2803
CspCI CAANNNNNGTGG 2 cut(s) 1804, 1839
CviQI GTAC 7 cut(s) 590, 703, 1642, 1679, 1838, 2404, 2482
DdeI CTNAG 8 cut(s) 254, 392, 526, 683, 1386, 1442, 1820, 2645
DrdI GACNNNNNNGTC 1 cut(s) 463
DseDI GACNNNNNNGTC 1 cut(s) 463
EaeI YGGCCR 5 cut(s) 603, 727, 1672, 2547, 2650
Eam1104I CTCTTC 2 cut(s) 2049, 2214
EarI CTCTTC 2 cut(s) 2049, 2214
EciI GGCGGA 1 cut(s) 293
Ecl136II GAGCTC 1 cut(s) 2728
Eco130I CCWWGG 2 cut(s) 600, 2667
Eco24I GRGCYC 1 cut(s) 2730
Eco32I GATATC 2 cut(s) 1625, 2270
Eco47I GGWCC 3 cut(s) 944, 1088, 2698
Eco53kI GAGCTC 1 cut(s) 2728
Eco57I CTGAAG 2 cut(s) 462, 1975
Eco88I CYCGRG 2 cut(s) 1412, 2147
EcoICRI GAGCTC 1 cut(s) 2728
EcoNI CCTNNNNNAGG 1 cut(s) 2052
EcoO109I RGGNCCY 1 cut(s) 2906
EcoRII CCWGG 2 cut(s) 1778, 2854
EcoRV GATATC 2 cut(s) 1625, 2270
EcoT14I CCWWGG 2 cut(s) 600, 2667
EcoT22I ATGCAT 2 cut(s) 1552, 1671
EcoT38I GRGCYC 1 cut(s) 2730
ErhI CCWWGG 2 cut(s) 600, 2667
Esp3I CGTCTC 1 cut(s) 2779
FalI AAGNNNNNCTT 2 cut(s) 101, 133
FaqI GGGAC 2 cut(s) 218, 419
FauI CCCGC 1 cut(s) 2968
FbaI TGATCA 4 cut(s) 1524, 2076, 3024, 3069
FblI GTMKAC 1 cut(s) 1981
Fnu4HI GCNGC 5 cut(s) 2440, 2653, 2747, 2970, 2973
FriOI GRGCYC 1 cut(s) 2730
Fsp4HI GCNGC 5 cut(s) 2440, 2653, 2747, 2970, 2973
FspI TGCGCA 1 cut(s) 2303
GlaI GCGC 1 cut(s) 2303
GluI GCNGC 5 cut(s) 2440, 2653, 2747, 2970, 2973
GsaI CCCAGC 3 cut(s) 907, 1051, 1267
GsuI CTGGAG 2 cut(s) 1749, 1911
HaeIII GGCC 9 cut(s) 546, 605, 729, 1674, 1827, 2549, 2652, 2908, 3097
HapII CCGG 2 cut(s) 2213, 2804
HgaI GACGC 1 cut(s) 2761
HhaI GCGC 1 cut(s) 2304
Hin6I GCGC 1 cut(s) 2302
HinP1I GCGC 1 cut(s) 2302
HindIII AAGCTT 4 cut(s) 115, 523, 1817, 2691
HpaII CCGG 2 cut(s) 2213, 2804
HphI GGTGA 3 cut(s) 1893, 2143, 2735
Hpy166II GTNNAC 2 cut(s) 1982, 2891
Hpy8I GTNNAC 2 cut(s) 1982, 2891
HpyAV CCTTC 7 cut(s) 747, 1784, 1851, 2570, 2836, 2931, 3087
HpyCH4III ACNGT 5 cut(s) 589, 1345, 2255, 2447, 2742
HpyCH4IV ACGT 2 cut(s) 769, 2893
HpyF10VI GCNNNNNNNGC 2 cut(s) 109, 195
HpyF3I CTNAG 8 cut(s) 254, 392, 526, 683, 1386, 1442, 1820, 2645
HpySE526I ACGT 2 cut(s) 769, 2893
HspAI GCGC 1 cut(s) 2302
Kpn2I TCCGGA 1 cut(s) 2212
KpnI GGTACC 2 cut(s) 593, 1841
Ksp22I TGATCA 4 cut(s) 1524, 2076, 3024, 3069
KspI CCGCGG 1 cut(s) 1976
LmnI GCTCC 1 cut(s) 2733
Lsp1109I GCAGC 2 cut(s) 2758, 2956
LweI GCATC 3 cut(s) 1559, 2313, 2664
MaeII ACGT 2 cut(s) 769, 2893
MaeIII GTNAC 7 cut(s) 27, 1508, 1845, 1949, 2096, 2468, 2636
MbiI CCGCTC 1 cut(s) 3043
MfeI CAATTG 2 cut(s) 190, 452
MflI RGATCY 3 cut(s) 87, 1351, 1801
MhlI GDGCHC 1 cut(s) 2730
MlsI TGGCCA 4 cut(s) 605, 729, 1674, 2549
MluNI TGGCCA 4 cut(s) 605, 729, 1674, 2549
MlyI GAGTC 6 cut(s) 41, 223, 1397, 1718, 2159, 2415
MmeI TCCRAC 4 cut(s) 312, 1765, 2683, 2788
Mox20I TGGCCA 4 cut(s) 605, 729, 1674, 2549
Mph1103I ATGCAT 2 cut(s) 1552, 1671
MroI TCCGGA 1 cut(s) 2212
MscI TGGCCA 4 cut(s) 605, 729, 1674, 2549
MslI CAYNNNNRTG 9 cut(s) 81, 128, 795, 867, 1011, 1155, 1227, 1959, 2495
Msp20I TGGCCA 4 cut(s) 605, 729, 1674, 2549
MspA1I CMGCKG 1 cut(s) 1975
MspCI CTTAAG 2 cut(s) 1472, 1618
MspI CCGG 2 cut(s) 2213, 2804
MspR9I CCNGG 2 cut(s) 1780, 2856
MunI CAATTG 2 cut(s) 190, 452
Mva1269I GAATGC 2 cut(s) 1552, 1671
MvaI CCWGG 2 cut(s) 1780, 2856
MvnI CGCG 2 cut(s) 1975, 2535
MwoI GCNNNNNNNGC 2 cut(s) 109, 195
NlaIV GGNNCC 6 cut(s) 591, 1839, 2059, 2249, 2603, 2907
NmuCI GTSAC 1 cut(s) 27
NruI TCGCGA 1 cut(s) 2535
NsbI TGCGCA 1 cut(s) 2303
NsiI ATGCAT 2 cut(s) 1552, 1671
NspI RCATGY 2 cut(s) 499, 652
PaeR7I CTCGAG 2 cut(s) 1412, 2147
PagI TCATGA 1 cut(s) 2079
PasI CCCWGGG 1 cut(s) 1779
PciI ACATGT 2 cut(s) 495, 648
PcsI WCGNNNNNNNCGW 1 cut(s) 2154
PctI GAATGC 2 cut(s) 1552, 1671
PfeI GAWTC 8 cut(s) 751, 926, 1070, 1381, 2351, 2530, 2584, 2614
PinAI ACCGGT 1 cut(s) 2803
PkrI GCNGC 5 cut(s) 2441, 2654, 2748, 2971, 2974
PleI GAGTC 6 cut(s) 41, 223, 1396, 1717, 2158, 2415
PpsI GAGTC 6 cut(s) 41, 223, 1396, 1717, 2158, 2415
PscI ACATGT 2 cut(s) 495, 648
PshAI GACNNNNGTC 1 cut(s) 2425
PshBI ATTAAT 3 cut(s) 867, 1227, 1637
PsiI TTATAA 2 cut(s) 1434, 2433
Psp124BI GAGCTC 1 cut(s) 2730
Psp6I CCWGG 2 cut(s) 1778, 2854
PspFI CCCAGC 3 cut(s) 903, 1047, 1263
PspGI CCWGG 2 cut(s) 1778, 2854
PspN4I GGNNCC 6 cut(s) 591, 1839, 2059, 2249, 2603, 2907
PspPI GGNCC 6 cut(s) 944, 1088, 1826, 2698, 2906, 3096
PspXI VCTCGAGB 1 cut(s) 2147
PsrI GAACNNNNNNTAC 2 cut(s) 1906, 1938
PstI CTGCAG 1 cut(s) 2109
PsuI RGATCY 3 cut(s) 87, 1351, 1801
RruI TCGCGA 1 cut(s) 2535
RsaI GTAC 7 cut(s) 591, 704, 1643, 1680, 1839, 2405, 2483
RsaNI GTAC 7 cut(s) 590, 703, 1642, 1679, 1838, 2404, 2482
RseI CAYNNNNRTG 9 cut(s) 81, 128, 795, 867, 1011, 1155, 1227, 1959, 2495
SacI GAGCTC 1 cut(s) 2730
SacII CCGCGG 1 cut(s) 1976
SatI GCNGC 5 cut(s) 2440, 2653, 2747, 2970, 2973
Sau96I GGNCC 6 cut(s) 944, 1088, 1826, 2698, 2906, 3096
ScaI AGTACT 1 cut(s) 2483
SchI GAGTC 6 cut(s) 41, 223, 1397, 1718, 2159, 2415
ScrFI CCNGG 2 cut(s) 1780, 2856
SduI GDGCHC 1 cut(s) 2730
SfaNI GCATC 3 cut(s) 1559, 2313, 2664
SfcI CTRYAG 1 cut(s) 2105
Sfr274I CTCGAG 2 cut(s) 1412, 2147
Sfr303I CCGCGG 1 cut(s) 1976
SgrBI CCGCGG 1 cut(s) 1976
SinI GGWCC 3 cut(s) 944, 1088, 2698
SlaI CTCGAG 2 cut(s) 1412, 2147
SmiMI CAYNNNNRTG 9 cut(s) 81, 128, 795, 867, 1011, 1155, 1227, 1959, 2495
SmlI CTYRAG 6 cut(s) 317, 1412, 1472, 1618, 2147, 2423
SmoI CTYRAG 6 cut(s) 317, 1412, 1472, 1618, 2147, 2423
SsiI CCGC 8 cut(s) 304, 1973, 1975, 2439, 2653, 2972, 2975, 3043
SspI AATATT 2 cut(s) 490, 571
SstI GAGCTC 1 cut(s) 2730
StyD4I CCNGG 2 cut(s) 1778, 2854
StyI CCWWGG 2 cut(s) 600, 2667
TaaI ACNGT 5 cut(s) 589, 1345, 2255, 2447, 2742
TaiI ACGT 2 cut(s) 772, 2896
TaqI TCGA 8 cut(s) 213, 1413, 1497, 2148, 2178, 2553, 2561, 2829
TatI WGTACW 2 cut(s) 1641, 2481
TauI GCSGC 3 cut(s) 2442, 2655, 2975
TfiI GAWTC 8 cut(s) 751, 926, 1070, 1381, 2351, 2530, 2584, 2614
TscAI CASTG 4 cut(s) 1450, 1534, 2745, 3043
TseFI GTSAC 1 cut(s) 27
TseI GCWGC 2 cut(s) 2746, 2969
Tsp45I GTSAC 1 cut(s) 27
TspGWI ACGGA 2 cut(s) 1677, 2409
TspRI CASTG 4 cut(s) 1450, 1534, 2745, 3043
Vha464I CTTAAG 2 cut(s) 1472, 1618
VpaK11BI GGWCC 3 cut(s) 944, 1088, 2698
VspI ATTAAT 3 cut(s) 867, 1227, 1637
XagI CCTNNNNNAGG 1 cut(s) 2052
XceI RCATGY 2 cut(s) 499, 652
XcmI CCANNNNNNNNNTGG 2 cut(s) 1488, 1689
XhoI CTCGAG 2 cut(s) 1412, 2147
XmiI GTMKAC 1 cut(s) 1981
ZrmI AGTACT 1 cut(s) 2483
Zsp2I ATGCAT 2 cut(s) 1552, 1671
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.