Rmu_sc0000260.1_g000009

Leucine rich repeat

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000260.1
Physical Location & Seq
Reverse (-)
18181 .. 24599
6419 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000260.1_g000009.1.cds

Sequence Viewer

Length: 3177 bp
atgcagacactttgccatgatgatgagcgctctgccttgttacaattcaaagctagtttcactatagacaagtctgcttcccaagatccctttgcttatccgaaagttgcatcctggggtagtctagaaggagatcctaaaaggagtaactgttgttcatggaatggtgttgaatgcaacgacaattcgggccacgttattggccttgaccttgccagtagctgtcttcatggttccatcaactccaatagcagtctttttcaacttgttcagttgcagaggcttgacctctctgacaataacttcagcttctctcaaataccatccaggttaggccatgatcttactagtctcacatatctcaatctttcaatgtcttcattttctggccaaattccttccgaaatttcatatctatccaagctatctacacttcatctgtcttcatatgtgcctcctctcgaaatgcctcgtctcaaaatgcctcgtctcaaaatgcccaacttcagaattctagttcagaacttaaccaacataaaacagcttcatctttttgacgtcgagatacgctccacagtgcctaatacattggtgaatatgtcttctctcacatctctccgtcttcaagcctgtgaattggaggggcaattcccagtaggcattttccacctaccaaacttgcaagtacttgatttggccaataactttgatctaaccggttattttcctgatgaccttaacaccagcagccccttgaagatattgaatttgcaggcaagcgatttctctggtcatatacctgcttcaatcagaaatcttcgtgccttgcatttgttgaacatacgatcctgtaacttttatccccatgttccatcttcactttccaacgttacccagctcaatttccttgatctttcttccttttatgactatagttatctacctgaccttccaacaatccatactttcagtggccaagtttcagatttctggtcttgggttggaaagctgaccaaacttaaccacttgtcccttgttggtaactacttaaggggagatttgccatgttctttggctactttgactcaacttttggtattagacttgaaccagaatctaataactggtgaaatcccatgttgtttggctaatttgacacaacttttgaaattagacttgggccgcaatcaaataaccggtcaaatcccatcttgccttgtgcagctgagccaattaactttgttagacgtacgattcaacaatctgcaaggagcaattcccaggtcactattcgacctaagaaatcttaaatatatttacctccactcaaataacttgagtgggtctgttgaattggacgagttttccaagctcaaaaagttgcgaggacttcgtttgtcgctcaacaagttctctgtgcagatcaaaactggatttaatgctattgctccaaagcttgaagtactaggattgggttcatgcaacttaatggagtttccggaatttttgaaatacactagtcaactggaggatctagatctttctgacaacaatcttcatggccatataccaaaatggatgtggaattcaactggtgaaactttgaggtttctcaacctctctcacaaccacttaactggatttgaagaaaatccggtcattattccatggcgtgggttatactctgtacagctcgactctaacatgttacgaggatcactgccaattccatcgccgtcaatgtcatactattttgtttcaaacaatgaatatgcaggagaaattccagcaacattctgcaacatatggccactatgtattcttgatttgtctaacaacaacctgaatggcatgattccccaatgttttgataatctcagatttcttcagatattgagactgcagaacaattcttttcatggggatattcctcagataggttcaaaaagatgcttgtggttaagagggattgacttgagttataatcagctacaagggaagctaccaagatcaattgccaattgttctaagttgttgtttcttaatttgggaaataatcagatcagtgatgccttcccatcttggttaggagtgcttcaacaattgaaaggtctcattttgcggtctaatgcatttcatggtataattgggaagcctacaagtagccatgagttccctcagctgtccatcattgatttatctagcaatgatttttcaggtatcttgccttccaagtacttagagaactggaatgccatgaaatctgttgatgcaaacgagaatatatacctccaatccatgttcttctttggcgggacgtatctagaaacattctactatgattacagaattacagtttttagcaaaggtgttgaattggagtatttcaagaccccttatcttatgagactcatagacctctcaagtaacagatttgtgggagagattccaggtatcattgggaacctaagagggcttaatctgcttaatctttccaacaacactctcactggtctcatccctccatctttggggaacttgattggtcttgaatcgttagatctctcccaaaatcagctctcaggaaagatccccagtggtctggcacatttgacattccttgcatactttaatgtatcccataatcgtcttttggggtctattccacaaggtcgacaatttgatacattccaagaggatatgtaccaaggaaactcaggtttgtgtggaaaacctatgtcaaagaaatgtgaagattctgagagcacaacaccacaaacaacctttgaacaggacgaagactctgggtttcaaattgagctagattggtttgtggttctgccaggagttgtggctggtataatagtaggaatggttgtgggaaacttttggaccgccaagaaacatgactggtttgtggagacattcagcaggaggaggaaagtccttgcaaggctgttgggagatgctgttctggatggaattgactttgacattgaaggagggactgaccaaaactgggatgaccatgcaaggggcagaatccctcctattgaggagatattcgaggatgacgtcgaggcatcaaatgttgagctgcctgttccacctattgtggatgttgtggatgccactcgtctatcgaggttggcaaaggagatctcgaggttgggatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1058

Amino Acids

118.61

Weight (kDa)

5.66

Isoelectric Point (pI)

44.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1983
AatII GACGTC 2 cut(s) 561, 3078
Acc36I ACCTGC 1 cut(s) 808
AccB7I CCANNNNNTGG 1 cut(s) 1673
AccI GTMKAC 1 cut(s) 2674
AccIII TCCGGA 1 cut(s) 1498
AciI CCGC 4 cut(s) 1183, 2122, 2313, 2895
AclI AACGTT 1 cut(s) 888
AclWI GGATC 6 cut(s) 80, 128, 840, 1539, 1723, 2584
AcoI YGGCCR 5 cut(s) 388, 696, 973, 1561, 1808
AcsI RAATTY 7 cut(s) 393, 405, 510, 766, 1502, 1585, 1782
AcuI CTGAAG 3 cut(s) 289, 490, 1871
AcyI GRCGYC 2 cut(s) 558, 3075
AfaI GTAC 6 cut(s) 687, 1251, 1464, 1689, 2237, 2705
AfeI AGCGCT 1 cut(s) 29
AfiI CCNNNNNNNGG 5 cut(s) 1673, 1937, 2531, 3019, 3034
AflII CTTAAG 1 cut(s) 1048
AflIII ACRYGT 1 cut(s) 1704
AgeI ACCGGT 2 cut(s) 716, 1196
AhlI ACTAGT 2 cut(s) 347, 1517
AjnI CCWGG 5 cut(s) 113, 326, 1280, 2449, 2842
AjuI GAANNNNNNNTTGG 2 cut(s) 1160, 1192
AloI GAACNNNNNNTCC 4 cut(s) 830, 862, 2955, 2987
Alw21I GWGCWC 1 cut(s) 2768
Alw26I GTCTC 8 cut(s) 356, 479, 494, 1891, 2117, 2401, 2519, 2915
AlwI GGATC 6 cut(s) 80, 128, 840, 1539, 1723, 2584
AlwNI CAGNNNCTG 1 cut(s) 222
Ama87I CYCGRG 1 cut(s) 3163
Aor13HI TCCGGA 1 cut(s) 1498
Aor51HI AGCGCT 1 cut(s) 29
AoxI GGCC 9 cut(s) 190, 202, 334, 388, 696, 973, 1180, 1561, 1808
ApeKI GCWGC 3 cut(s) 747, 1222, 3097
ApoI RAATTY 7 cut(s) 393, 405, 510, 766, 1502, 1585, 1782
ArsI GACNNNNNNTTYG 6 cut(s) 1075, 1107, 1147, 1179, 1183, 1215
AsiGI ACCGGT 2 cut(s) 716, 1196
AspLEI GCGC 1 cut(s) 30
AspS9I GGNCC 3 cut(s) 190, 1180, 2892
AsuHPI GGTGA 3 cut(s) 604, 1139, 1607
AvaI CYCGRG 1 cut(s) 3163
AvaII GGWCC 1 cut(s) 2892
BalI TGGCCA 5 cut(s) 390, 698, 975, 1563, 1810
BarI GAAGNNNNNNTAC 2 cut(s) 2212, 2244
BbsI GAAGAC 6 cut(s) 218, 369, 435, 594, 614, 2805
Bbv12I GWGCWC 1 cut(s) 2768
BbvCI CCTCAGC 1 cut(s) 2178
BbvI GCAGC 3 cut(s) 759, 1234, 3084
BccI CCATC 9 cut(s) 245, 331, 880, 1216, 1738, 2086, 2195, 2533, 2972
BceAI ACGGC 1 cut(s) 1720
BciT130I CCWGG 5 cut(s) 115, 328, 1282, 2451, 2844
BciVI GTATCC 1 cut(s) 2647
BcoDI GTCTC 8 cut(s) 356, 479, 494, 1891, 2117, 2401, 2519, 2915
BcuI ACTAGT 2 cut(s) 347, 1517
BfmI CTRYAG 3 cut(s) 63, 931, 1901
BfoI RGCGCY 1 cut(s) 31
BfrI CTTAAG 1 cut(s) 1048
BfuAI ACCTGC 1 cut(s) 808
BfuI GTATCC 1 cut(s) 2647
BglII AGATCT 3 cut(s) 1537, 2560, 3159
BisI GCNGC 4 cut(s) 748, 1183, 1223, 3098
BlpI GCTNAGC 1 cut(s) 1226
BlsI GCNGC 4 cut(s) 749, 1184, 1224, 3099
BmcAI AGTACT 3 cut(s) 687, 1464, 2237
Bme1390I CCNGG 5 cut(s) 115, 328, 1282, 2451, 2844
Bme18I GGWCC 1 cut(s) 2892
BmeT110I CYCGRG 1 cut(s) 3163
BmgT120I GGNCC 3 cut(s) 190, 1180, 2892
BmiI GGNNCC 2 cut(s) 235, 2465
BmrFI CCNGG 5 cut(s) 115, 328, 1282, 2451, 2844
BmrI ACTGGG 3 cut(s) 647, 2589, 3028
BmsI GCATC 7 cut(s) 119, 1940, 2059, 2260, 2956, 3092, 3118
BmuI ACTGGG 3 cut(s) 647, 2589, 3028
BpiI GAAGAC 6 cut(s) 218, 369, 435, 594, 614, 2805
BplI GAGNNNNNCTC 2 cut(s) 554, 586
BpmI CTGGAG 1 cut(s) 1547
Bpu10I CCTNAGC 1 cut(s) 2178
Bpu1102I GCTNAGC 1 cut(s) 1226
BpuEI CTTGAG 3 cut(s) 1357, 1996, 2407
BsaBI GATNNNNATC 1 cut(s) 1536
BsaHI GRCGYC 2 cut(s) 558, 3075
BsaI GGTCTC 2 cut(s) 2117, 2519
BsaJI CCNNGG 4 cut(s) 114, 1280, 1667, 2707
BsaWI WCCGGW 4 cut(s) 716, 1196, 1498, 1654
BsaXI ACNNNNNCTCC 4 cut(s) 136, 166, 2955, 2985
Bsc4I CCNNNNNNNGG 5 cut(s) 1673, 1937, 2531, 3019, 3034
Bse118I RCCGGY 2 cut(s) 716, 1196
Bse3DI GCAATG 1 cut(s) 2212
Bse8I GATNNNNATC 1 cut(s) 1536
BseAI TCCGGA 1 cut(s) 1498
BseBI CCWGG 5 cut(s) 115, 328, 1282, 2451, 2844
BseDI CCNNGG 4 cut(s) 114, 1280, 1667, 2707
BseGI GGATG 9 cut(s) 110, 323, 1584, 2517, 2983, 3028, 3076, 3124, 3133
BseJI GATNNNNATC 1 cut(s) 1536
BseLI CCNNNNNNNGG 5 cut(s) 1673, 1937, 2531, 3019, 3034
BseMI GCAATG 1 cut(s) 2212
BseMII CTCAG 7 cut(s) 1217, 1891, 1946, 2192, 2595, 2730, 2751
BseRI GAGGAG 3 cut(s) 447, 2950, 3071
BseXI GCAGC 3 cut(s) 759, 1234, 3084
BseYI CCCAGC 1 cut(s) 894
BsgI GTGCAG 2 cut(s) 1241, 1439
BshFI GGCC 9 cut(s) 192, 204, 336, 390, 698, 975, 1182, 1563, 1810
BshTI ACCGGT 2 cut(s) 716, 1196
BsiHKAI GWGCWC 1 cut(s) 2768
BsiHKCI CYCGRG 1 cut(s) 3163
BsiSI CCGG 4 cut(s) 717, 1197, 1499, 1655
BsiWI CGTACG 1 cut(s) 1249
BslFI GGGAC 3 cut(s) 1015, 2329, 3019
BslI CCNNNNNNNGG 5 cut(s) 1673, 1937, 2531, 3019, 3034
BsmAI GTCTC 8 cut(s) 356, 479, 494, 1891, 2117, 2401, 2519, 2915
BsmBI CGTCTC 2 cut(s) 479, 494
BsmFI GGGAC 3 cut(s) 1015, 2329, 3019
BsmI GAATGC 2 cut(s) 179, 2257
BsnI GGCC 9 cut(s) 192, 204, 336, 390, 698, 975, 1182, 1563, 1810
Bso31I GGTCTC 2 cut(s) 2117, 2519
BsoBI CYCGRG 1 cut(s) 3163
Bsp1286I GDGCHC 1 cut(s) 2768
Bsp13I TCCGGA 1 cut(s) 1498
Bsp1407I TGTACA 1 cut(s) 1687
Bsp1720I GCTNAGC 1 cut(s) 1226
Bsp19I CCATGG 1 cut(s) 1667
BspACI CCGC 4 cut(s) 1183, 2122, 2313, 2895
BspANI GGCC 9 cut(s) 192, 204, 336, 390, 698, 975, 1182, 1563, 1810
BspCNI CTCAG 7 cut(s) 1218, 1890, 1945, 2191, 2594, 2729, 2752
BspEI TCCGGA 1 cut(s) 1498
BspLI GGNNCC 2 cut(s) 235, 2465
BspMAI CTGCAG 1 cut(s) 1905
BspMI ACCTGC 1 cut(s) 808
BspPI GGATC 6 cut(s) 80, 128, 840, 1539, 1723, 2584
BspTI CTTAAG 1 cut(s) 1048
BspTNI GGTCTC 2 cut(s) 2117, 2519
BsrDI GCAATG 1 cut(s) 2212
BsrFI RCCGGY 2 cut(s) 716, 1196
BsrGI TGTACA 1 cut(s) 1687
BssAI RCCGGY 2 cut(s) 716, 1196
BssECI CCNNGG 4 cut(s) 114, 1280, 1667, 2707
BssNI GRCGYC 2 cut(s) 558, 3075
BssT1I CCWWGG 2 cut(s) 1667, 2707
Bst2UI CCWGG 5 cut(s) 115, 328, 1282, 2451, 2844
Bst4CI ACNGT 3 cut(s) 152, 577, 2356
BstACI GRCGYC 2 cut(s) 558, 3075
BstAFI CTTAAG 1 cut(s) 1048
BstAUI TGTACA 1 cut(s) 1687
BstC8I GCNNGC 2 cut(s) 774, 778
BstDSI CCRYGG 1 cut(s) 1667
BstENI CCTNNNNNAGG 1 cut(s) 1935
BstF5I GGATG 9 cut(s) 110, 323, 1584, 2517, 2983, 3028, 3076, 3124, 3133
BstH2I RGCGCY 1 cut(s) 31
BstHHI GCGC 1 cut(s) 30
BstMAI GTCTC 8 cut(s) 356, 479, 494, 1891, 2117, 2401, 2519, 2915
BstMWI GCNNNNNNNGC 1 cut(s) 2482
BstNI CCWGG 5 cut(s) 115, 328, 1282, 2451, 2844
BstNSI RCATGY 1 cut(s) 1708
BstSCI CCNGG 5 cut(s) 113, 326, 1280, 2449, 2842
BstSFI CTRYAG 3 cut(s) 63, 931, 1901
BstV1I GCAGC 3 cut(s) 759, 1234, 3084
BstV2I GAAGAC 6 cut(s) 218, 369, 435, 594, 614, 2805
BstX2I RGATCY 7 cut(s) 85, 133, 1531, 1537, 2560, 2589, 3159
BstXI CCANNNNNNTGG 3 cut(s) 200, 1637, 2602
BstYI RGATCY 7 cut(s) 85, 133, 1531, 1537, 2560, 2589, 3159
BsuI GTATCC 1 cut(s) 2647
BsuRI GGCC 9 cut(s) 192, 204, 336, 390, 698, 975, 1182, 1563, 1810
BtgI CCRYGG 1 cut(s) 1667
BtgZI GCGATG 1 cut(s) 1716
BtsCI GGATG 9 cut(s) 110, 323, 1584, 2517, 2983, 3028, 3076, 3124, 3133
BtsI GCAGTG 1 cut(s) 1718
BtsIMutI CAGTG 6 cut(s) 582, 976, 1718, 2071, 2508, 2602
BveI ACCTGC 1 cut(s) 808
Cac8I GCNNGC 2 cut(s) 774, 778
CaiI CAGNNNCTG 1 cut(s) 222
CfoI GCGC 1 cut(s) 30
Cfr10I RCCGGY 2 cut(s) 716, 1196
Cfr13I GGNCC 3 cut(s) 190, 1180, 2892
Csp6I GTAC 6 cut(s) 686, 1250, 1463, 1688, 2236, 2704
CspAI ACCGGT 2 cut(s) 716, 1196
CviQI GTAC 6 cut(s) 686, 1250, 1463, 1688, 2236, 2704
EaeI YGGCCR 5 cut(s) 388, 696, 973, 1561, 1808
Eco130I CCWWGG 2 cut(s) 1667, 2707
Eco31I GGTCTC 2 cut(s) 2117, 2519
Eco47I GGWCC 1 cut(s) 2892
Eco47III AGCGCT 1 cut(s) 29
Eco57I CTGAAG 3 cut(s) 289, 490, 1871
Eco88I CYCGRG 1 cut(s) 3163
EcoNI CCTNNNNNAGG 1 cut(s) 1935
EcoRI GAATTC 2 cut(s) 510, 1585
EcoRII CCWGG 5 cut(s) 113, 326, 1280, 2449, 2842
EcoT14I CCWWGG 2 cut(s) 1667, 2707
EcoT22I ATGCAT 1 cut(s) 2134
ErhI CCWWGG 2 cut(s) 1667, 2707
Esp3I CGTCTC 2 cut(s) 479, 494
FaqI GGGAC 3 cut(s) 1015, 2329, 3019
FauI CCCGC 1 cut(s) 2306
FauNDI CATATG 2 cut(s) 448, 1805
FblI GTMKAC 1 cut(s) 2674
Fnu4HI GCNGC 4 cut(s) 748, 1183, 1223, 3098
FokI GGATG 9 cut(s) 97, 310, 1591, 2504, 2990, 3035, 3083, 3131, 3140
Fsp4HI GCNGC 4 cut(s) 748, 1183, 1223, 3098
GlaI GCGC 1 cut(s) 29
GluI GCNGC 4 cut(s) 748, 1183, 1223, 3098
GsaI CCCAGC 1 cut(s) 898
GsuI CTGGAG 1 cut(s) 1547
HaeII RGCGCY 1 cut(s) 31
HaeIII GGCC 9 cut(s) 192, 204, 336, 390, 698, 975, 1182, 1563, 1810
HapII CCGG 4 cut(s) 717, 1197, 1499, 1655
HhaI GCGC 1 cut(s) 30
Hin1I GRCGYC 2 cut(s) 558, 3075
Hin6I GCGC 1 cut(s) 28
HinP1I GCGC 1 cut(s) 28
HincII GTYRAC 2 cut(s) 1523, 2675
HindII GTYRAC 2 cut(s) 1523, 2675
HindIII AAGCTT 1 cut(s) 1454
HpaII CCGG 4 cut(s) 717, 1197, 1499, 1655
HphI GGTGA 3 cut(s) 604, 1139, 1607
Hpy166II GTNNAC 2 cut(s) 1523, 2675
Hpy8I GTNNAC 2 cut(s) 1523, 2675
Hpy99I CGWCG 2 cut(s) 563, 3080
HpyAV CCTTC 6 cut(s) 122, 408, 959, 2083, 2238, 2993
HpyCH4III ACNGT 3 cut(s) 152, 577, 2356
HpyCH4IV ACGT 6 cut(s) 195, 558, 888, 1248, 2318, 3075
HpyF10VI GCNNNNNNNGC 1 cut(s) 2482
HpySE526I ACGT 6 cut(s) 195, 558, 888, 1248, 2318, 3075
Hsp92I GRCGYC 2 cut(s) 558, 3075
HspAI GCGC 1 cut(s) 28
Kpn2I TCCGGA 1 cut(s) 1498
LmnI GCTCC 3 cut(s) 575, 1271, 1453
Lsp1109I GCAGC 3 cut(s) 759, 1234, 3084
LweI GCATC 7 cut(s) 119, 1940, 2059, 2260, 2956, 3092, 3118
MaeII ACGT 6 cut(s) 195, 558, 888, 1248, 2318, 3075
MaeIII GTNAC 8 cut(s) 39, 146, 851, 889, 1040, 1284, 1707, 2426
MfeI CAATTG 3 cut(s) 2013, 2020, 2102
MflI RGATCY 7 cut(s) 85, 133, 1531, 1537, 2560, 2589, 3159
MhlI GDGCHC 1 cut(s) 2768
MlsI TGGCCA 5 cut(s) 390, 698, 975, 1563, 1810
MluNI TGGCCA 5 cut(s) 390, 698, 975, 1563, 1810
MlyI GAGTC 4 cut(s) 1078, 1691, 2403, 2795
MmeI TCCRAC 4 cut(s) 909, 977, 982, 2520
Mox20I TGGCCA 5 cut(s) 390, 698, 975, 1563, 1810
Mph1103I ATGCAT 1 cut(s) 2134
MroI TCCGGA 1 cut(s) 1498
MscI TGGCCA 5 cut(s) 390, 698, 975, 1563, 1810
MslI CAYNNNNRTG 1 cut(s) 21
Msp20I TGGCCA 5 cut(s) 390, 698, 975, 1563, 1810
MspA1I CMGCKG 2 cut(s) 1225, 2182
MspCI CTTAAG 1 cut(s) 1048
MspI CCGG 4 cut(s) 717, 1197, 1499, 1655
MspR9I CCNGG 5 cut(s) 115, 328, 1282, 2451, 2844
MunI CAATTG 3 cut(s) 2013, 2020, 2102
Mva1269I GAATGC 2 cut(s) 179, 2257
MvaI CCWGG 5 cut(s) 115, 328, 1282, 2451, 2844
MwoI GCNNNNNNNGC 1 cut(s) 2482
NcoI CCATGG 1 cut(s) 1667
NdeI CATATG 2 cut(s) 448, 1805
NlaIV GGNNCC 2 cut(s) 235, 2465
NmuCI GTSAC 1 cut(s) 1284
NsiI ATGCAT 1 cut(s) 2134
NspI RCATGY 1 cut(s) 1708
PaeR7I CTCGAG 1 cut(s) 3163
PciI ACATGT 1 cut(s) 1704
PcsI WCGNNNNNNNCGW 1 cut(s) 3072
PctI GAATGC 2 cut(s) 179, 2257
PfeI GAWTC 7 cut(s) 1114, 1254, 1855, 2446, 2552, 2756, 3042
Pfl23II CGTACG 1 cut(s) 1249
PflMI CCANNNNNTGG 1 cut(s) 1673
PinAI ACCGGT 2 cut(s) 716, 1196
PkrI GCNGC 4 cut(s) 749, 1184, 1224, 3099
PleI GAGTC 4 cut(s) 1078, 1691, 2403, 2795
PpsI GAGTC 4 cut(s) 1078, 1691, 2403, 2795
PscI ACATGT 1 cut(s) 1704
PsiI TTATAA 1 cut(s) 1983
Psp1406I AACGTT 1 cut(s) 888
Psp6I CCWGG 5 cut(s) 113, 326, 1280, 2449, 2842
PspFI CCCAGC 1 cut(s) 894
PspGI CCWGG 5 cut(s) 113, 326, 1280, 2449, 2842
PspLI CGTACG 1 cut(s) 1249
PspN4I GGNNCC 2 cut(s) 235, 2465
PspPI GGNCC 3 cut(s) 190, 1180, 2892
PsrI GAACNNNNNNTAC 2 cut(s) 139, 171
PstI CTGCAG 1 cut(s) 1905
PstNI CAGNNNCTG 1 cut(s) 222
PsuI RGATCY 7 cut(s) 85, 133, 1531, 1537, 2560, 2589, 3159
PvuII CAGCTG 2 cut(s) 1225, 2182
RsaI GTAC 6 cut(s) 687, 1251, 1464, 1689, 2237, 2705
RsaNI GTAC 6 cut(s) 686, 1250, 1463, 1688, 2236, 2704
RseI CAYNNNNRTG 1 cut(s) 21
SalI GTCGAC 1 cut(s) 2673
SatI GCNGC 4 cut(s) 748, 1183, 1223, 3098
Sau96I GGNCC 3 cut(s) 190, 1180, 2892
ScaI AGTACT 3 cut(s) 687, 1464, 2237
SchI GAGTC 4 cut(s) 1078, 1691, 2403, 2795
ScrFI CCNGG 5 cut(s) 115, 328, 1282, 2451, 2844
SduI GDGCHC 1 cut(s) 2768
SfaNI GCATC 7 cut(s) 119, 1940, 2059, 2260, 2956, 3092, 3118
SfcI CTRYAG 3 cut(s) 63, 931, 1901
Sfr274I CTCGAG 1 cut(s) 3163
SinI GGWCC 1 cut(s) 2892
SlaI CTCGAG 1 cut(s) 3163
SmiMI CAYNNNNRTG 1 cut(s) 21
SmlI CTYRAG 5 cut(s) 1048, 1336, 1975, 2422, 3163
SmoI CTYRAG 5 cut(s) 1048, 1336, 1975, 2422, 3163
SpeI ACTAGT 2 cut(s) 347, 1517
SsiI CCGC 4 cut(s) 1183, 2122, 2313, 2895
StyD4I CCNGG 5 cut(s) 113, 326, 1280, 2449, 2842
StyI CCWWGG 2 cut(s) 1667, 2707
TaaI ACNGT 3 cut(s) 152, 577, 2356
TaiI ACGT 6 cut(s) 198, 561, 891, 1251, 2321, 3078
TaqI TCGA 9 cut(s) 462, 561, 1293, 1695, 2674, 3066, 3078, 3143, 3164
TatI WGTACW 4 cut(s) 685, 1462, 1687, 2235
TauI GCSGC 1 cut(s) 1185
TfiI GAWTC 7 cut(s) 1114, 1254, 1855, 2446, 2552, 2756, 3042
TscAI CASTG 6 cut(s) 582, 976, 1725, 2071, 2515, 2602
TseFI GTSAC 1 cut(s) 1284
TseI GCWGC 3 cut(s) 747, 1222, 3097
Tsp45I GTSAC 1 cut(s) 1284
TspGWI ACGGA 1 cut(s) 608
TspRI CASTG 6 cut(s) 582, 976, 1725, 2071, 2515, 2602
Van91I CCANNNNNTGG 1 cut(s) 1673
Vha464I CTTAAG 1 cut(s) 1048
VpaK11BI GGWCC 1 cut(s) 2892
XagI CCTNNNNNAGG 1 cut(s) 1935
XapI RAATTY 7 cut(s) 393, 405, 510, 766, 1502, 1585, 1782
XbaI TCTAGA 3 cut(s) 124, 1534, 2323
XceI RCATGY 1 cut(s) 1708
XcmI CCANNNNNNNNNTGG 2 cut(s) 968, 1578
XhoI CTCGAG 1 cut(s) 3163
XmiI GTMKAC 1 cut(s) 2674
ZraI GACGTC 2 cut(s) 559, 3076
ZrmI AGTACT 3 cut(s) 687, 1464, 2237
Zsp2I ATGCAT 1 cut(s) 2134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.