Rroxscaffold_7G00208700

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000024
Physical Location & Seq
Reverse (-)
58824649 .. 58826647
1999 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00208700.1

Sequence Viewer

Length: 1932 bp
ATGCTCAGTTATCTCAACCTCGCTACCTCTTCCTTTTCTGGTCAAATCCCATCTGAAATTTCTCAATTGTCCAAGTTGTCGTCCCTTGATCTATCCTCCAATAGTGACAGTACCGGTGAAAGATCACTGAAGCAAAACCAGTCCAATCCAAAGAGGCTAGTTCAAAACTTGACGAGCCTAGAAAAGCTTCATCTCAGCTCCGTCGTCATTTCTGCACCAATACCCAATTCCATGGCAAATTTATCATTTTTGACATCTCTCCTCCTAGAGTATTGCGAGCTGCTAGGCAAATTTCCAGTAAGTATTTTAAAATTACAGAGTTTAAAATTTCTTAATGTAGAATCCAATCCAAATCTCACAGGTTTTTTGCCGGCATTTGAACAAACCAGTCCTCTCATGTCACTGAGAGTTTCTAGAACAAGGTTTTCAGGAGACCTCCCTTTTTCTATTGAAAAGCTTGATTCACTGAATGAGGTGCTTCCATCTTCACTCGGTAATCTTAGGCGGCTGGTTTATTTAGAGTACTTTTCAAGTAACACACTTACTGGCTCAATCCCTGCTTCTTTGGCAACCCTTACCCAACTGTCACATCTGTCACTTGATACTAATCATTTCAGTGGTTACATCCCGTCTTCTCTTGGAAATCTAACCCAGCTCACAACACTTTCGCTTGCATCAAATCAATTAACTGGTCCAATCCCATCTTCTCTAGGAAACCTCACCCAAGTCACTGAGTTAGACCTTTCTGGTAATGATTTCGGTGGTTACATCCCGTCTTCCATTGGAAATCTCAACCAGCTTGTAAGACTTTCACTTTCTATGAATCAATTAACTGGGCCAATCCCCTCTTCAGTAGGAAATCTTAGCAAACTAATTGAGTTAGATCTTTTTTCAAATAATTTGCACAGTTCCATTCCTGAGTCCTTATCCAATCTCACGAATCTCGTGACACTTTATCTAGATAGTAATAGTCTGAGCGGCAAAGTGAATTTCCACACGTTTCTGAAGCTGCAAAATCTCCTCATACTAGACAAGATTTATGAATGCAACAACAACTTTTCCAAAGTTATAACCCTGGGATTGGGTTCTTGCAACATAACAGAGTTCCCAAGTTTCCTAAGATATCAAGAAAATTTGCGATGGCCGGATCTTGCTGAGAATGGAATGCGTGGCCAAGTACCGAGATGGATGTGGAATGTAAGCAAAGAAAGTTTGATAGTCATGAACATTTCTCATAATTTCTTTTCTGGCTTTGACCATCCACCAGTTGTTCTTTCGTGGAGCGGCCTACAACTCTTGGATCTTTCATCCAACATGATTCAGGGATCACTACTGATACCTTCACCATCAATCGAGTACTATGTAATTTCAAACAACGGGCTCAGTGGACAAGTTTCACCTTTGATATGCAATCTGACTTCTCTGAAGTACCTTCATTTGTCAAATAACAAGTTGAGTGGCATGCTGCCGCAGTGTCTTGGGAATTTCACTGATAACTTGCGAGTTTTACATCTCGGAAACAACTCTTTTGAAGGCCACCTCCCGCAAGCATACACAAGCAATCTGACGATGATTGATGTTAGTAATAACAAACTGCAGGGGATATTACCAAGGTCTTTGGTGAATTGTGTGATGCTTGAGTTTCTTGTTATATCAAACAATGAATTCAATGATGTTTTCCCTCTTTGGTTGGGGACTCTCCCAGAATTGAGACTCTTGGCAATGCACCATAATGGGTTCCATGGGGTGATAAGGAAACTTGAAAAGAATCTAGATGATTTCCTTCAGTTGCACATTCTTGATCTATCTTTCAATAATTTCTCAGGCAACTTCCCCTTTGAATACATCTTCTCTGGAAATGCAATCAAAGGTACCACTTCGAATCAGTTCTCATACATGAAGACAACCTTAGATGTTGTTTATGATCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8

Protein Analysis

643

Amino Acids

71.11

Weight (kDa)

5.87

Isoelectric Point (pI)

40.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 159 - 225 8.3e-06 Leucine-rich repeat region
LRR_14 PF23598 212 - 411 4.9e-14 Leucine-rich repeat region
LRR_8 PF13855 266 - 325 2.6e-06 Leucine rich repeat
LRR_8 PF13855 499 - 555 3.1e-07 Leucine rich repeat
LRR_8 PF13855 520 - 579 3.8e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1070
Acc65I GGTACC 1 cut(s) 1871
AccB1I GGYRCC 1 cut(s) 1871
AccBSI CCGCTC 2 cut(s) 978, 1284
AciI CCGC 5 cut(s) 505, 978, 1284, 1469, 1544
AclWI GGATC 3 cut(s) 1155, 1308, 1333
AcoI YGGCCR 2 cut(s) 1142, 1171
AcsI RAATTY 8 cut(s) 57, 238, 290, 326, 988, 1132, 1483, 1664
AcuI CTGAAG 5 cut(s) 149, 834, 1025, 1445, 1769
AfaI GTAC 6 cut(s) 112, 524, 1179, 1358, 1430, 1873
AfiI CCNNNNNNNGG 1 cut(s) 1081
AflIII ACRYGT 1 cut(s) 996
AgeI ACCGGT 1 cut(s) 113
AjnI CCWGG 1 cut(s) 1074
AjuI GAANNNNNNNTTGG 6 cut(s) 211, 243, 688, 720, 832, 864
AluBI AGCT 7 cut(s) 187, 198, 280, 457, 655, 799, 1009
AluI AGCT 7 cut(s) 187, 198, 280, 457, 655, 799, 1009
Alw26I GTCTC 2 cut(s) 426, 1705
AlwI GGATC 3 cut(s) 1155, 1308, 1333
AoxI GGCC 5 cut(s) 836, 1142, 1171, 1285, 1534
ApeKI GCWGC 3 cut(s) 280, 1009, 1465
ApoI RAATTY 8 cut(s) 57, 238, 290, 326, 988, 1132, 1483, 1664
AsiGI ACCGGT 1 cut(s) 113
Asp700I GAANNNNTTC 2 cut(s) 186, 1886
Asp718I GGTACC 1 cut(s) 1871
AspS9I GGNCC 2 cut(s) 692, 836
AsuHPI GGTGA 6 cut(s) 128, 712, 1335, 1389, 1633, 1759
AsuII TTCGAA 1 cut(s) 1880
AvaII GGWCC 1 cut(s) 692
BalI TGGCCA 1 cut(s) 1173
BanI GGYRCC 1 cut(s) 1871
BanII GRGCYC 1 cut(s) 1383
BauI CACGAG 1 cut(s) 944
BbsI GAAGAC 3 cut(s) 624, 768, 1907
BbvI GCAGC 3 cut(s) 267, 996, 1452
BccI CCATC 7 cut(s) 58, 490, 709, 1134, 1179, 1266, 1354
BciT130I CCWGG 1 cut(s) 1076
BcoDI GTCTC 2 cut(s) 426, 1705
BfaI CTAG 9 cut(s) 158, 179, 266, 284, 414, 710, 959, 1028, 1772
BfmI CTRYAG 1 cut(s) 1595
BglII AGATCT 1 cut(s) 883
BisI GCNGC 7 cut(s) 281, 506, 979, 1010, 1285, 1466, 1469
BlsI GCNGC 7 cut(s) 282, 507, 980, 1011, 1286, 1467, 1470
BmcAI AGTACT 2 cut(s) 524, 1358
Bme1390I CCNGG 1 cut(s) 1076
Bme18I GGWCC 1 cut(s) 692
BmgT120I GGNCC 2 cut(s) 692, 836
BmiI GGNNCC 2 cut(s) 1739, 1873
BmrFI CCNGG 1 cut(s) 1076
BmrI ACTGGG 1 cut(s) 843
BmsI GCATC 2 cut(s) 683, 1623
BmuI ACTGGG 1 cut(s) 843
BpiI GAAGAC 3 cut(s) 624, 768, 1907
Bpu14I TTCGAA 1 cut(s) 1880
BpuEI CTTGAG 1 cut(s) 1658
BsaBI GATNNNNATC 1 cut(s) 606
BsaI GGTCTC 1 cut(s) 426
BsaJI CCNNGG 5 cut(s) 231, 1074, 1075, 1610, 1741
BsaWI WCCGGW 1 cut(s) 113
Bsc4I CCNNNNNNNGG 1 cut(s) 1081
Bse118I RCCGGY 2 cut(s) 113, 370
Bse1I ACTGG 7 cut(s) 139, 296, 387, 550, 694, 838, 1265
Bse3DI GCAATG 1 cut(s) 1728
Bse8I GATNNNNATC 1 cut(s) 606
BseBI CCWGG 1 cut(s) 1076
BseDI CCNNGG 5 cut(s) 231, 1074, 1075, 1610, 1741
BseGI GGATG 5 cut(s) 624, 768, 1194, 1258, 1307
BseJI GATNNNNATC 1 cut(s) 606
BseLI CCNNNNNNNGG 1 cut(s) 1081
BseMI GCAATG 1 cut(s) 1728
BseMII CTCAG 9 cut(s) 19, 208, 395, 723, 909, 965, 1146, 1396, 1836
BseNI ACTGG 7 cut(s) 139, 296, 387, 550, 694, 838, 1265
BseRI GAGGAG 2 cut(s) 251, 1010
BseXI GCAGC 3 cut(s) 267, 996, 1452
BseYI CCCAGC 1 cut(s) 651
BsgI GTGCAG 1 cut(s) 198
BshFI GGCC 5 cut(s) 838, 1144, 1173, 1287, 1536
BshNI GGYRCC 1 cut(s) 1871
BshTI ACCGGT 1 cut(s) 113
BsiSI CCGG 3 cut(s) 114, 371, 1145
BslFI GGGAC 2 cut(s) 67, 1708
BslI CCNNNNNNNGG 1 cut(s) 1081
BsmAI GTCTC 2 cut(s) 426, 1705
BsmFI GGGAC 2 cut(s) 67, 1708
BsmI GAATGC 2 cut(s) 1049, 1170
BsnI GGCC 5 cut(s) 838, 1144, 1173, 1287, 1536
Bso31I GGTCTC 1 cut(s) 426
Bsp119I TTCGAA 1 cut(s) 1880
Bsp1286I GDGCHC 1 cut(s) 1383
Bsp143I GATC 8 cut(s) 88, 122, 883, 1147, 1300, 1325, 1801, 1924
Bsp19I CCATGG 2 cut(s) 231, 1741
BspACI CCGC 5 cut(s) 505, 978, 1284, 1469, 1544
BspANI GGCC 5 cut(s) 838, 1144, 1173, 1287, 1536
BspCNI CTCAG 9 cut(s) 18, 207, 396, 724, 910, 966, 1147, 1395, 1835
BspHI TCATGA 1 cut(s) 1221
BspLI GGNNCC 2 cut(s) 1739, 1873
BspMAI CTGCAG 1 cut(s) 1599
BspPI GGATC 3 cut(s) 1155, 1308, 1333
BspT104I TTCGAA 1 cut(s) 1880
BspT107I GGYRCC 1 cut(s) 1871
BspTNI GGTCTC 1 cut(s) 426
BsrBI CCGCTC 2 cut(s) 978, 1284
BsrDI GCAATG 1 cut(s) 1728
BsrFI RCCGGY 2 cut(s) 113, 370
BsrI ACTGG 7 cut(s) 139, 296, 387, 550, 694, 838, 1265
BssAI RCCGGY 2 cut(s) 113, 370
BssECI CCNNGG 5 cut(s) 231, 1074, 1075, 1610, 1741
BssMI GATC 8 cut(s) 88, 122, 883, 1147, 1300, 1325, 1801, 1924
BssSI CACGAG 1 cut(s) 944
BssT1I CCWWGG 3 cut(s) 231, 1610, 1741
Bst2BI CACGAG 1 cut(s) 944
Bst2UI CCWGG 1 cut(s) 1076
Bst4CI ACNGT 3 cut(s) 110, 585, 908
Bst6I CTCTTC 2 cut(s) 34, 853
BstBI TTCGAA 1 cut(s) 1880
BstC8I GCNNGC 5 cut(s) 278, 372, 672, 1463, 1548
BstDSI CCRYGG 2 cut(s) 231, 1741
BstF5I GGATG 5 cut(s) 624, 768, 1194, 1258, 1307
BstKTI GATC 8 cut(s) 91, 125, 886, 1150, 1303, 1328, 1804, 1927
BstMAI GTCTC 2 cut(s) 426, 1705
BstMBI GATC 8 cut(s) 88, 122, 883, 1147, 1300, 1325, 1801, 1924
BstMWI GCNNNNNNNGC 1 cut(s) 566
BstNI CCWGG 1 cut(s) 1076
BstNSI RCATGY 1 cut(s) 1465
BstSCI CCNGG 1 cut(s) 1074
BstSFI CTRYAG 1 cut(s) 1595
BstV1I GCAGC 3 cut(s) 267, 996, 1452
BstV2I GAAGAC 3 cut(s) 624, 768, 1907
BstX2I RGATCY 3 cut(s) 883, 1147, 1300
BstXI CCANNNNNNTGG 1 cut(s) 232
BstYI RGATCY 3 cut(s) 883, 1147, 1300
BsuRI GGCC 5 cut(s) 838, 1144, 1173, 1287, 1536
BtgI CCRYGG 2 cut(s) 231, 1741
BtgZI GCGATG 1 cut(s) 1153
BtsCI GGATG 5 cut(s) 624, 768, 1194, 1258, 1307
BtsI GCAGTG 1 cut(s) 1478
BtsIMutI CAGTG 8 cut(s) 125, 401, 464, 622, 729, 1390, 1478, 1488
Cac8I GCNNGC 5 cut(s) 278, 372, 672, 1463, 1548
CciI TCATGA 1 cut(s) 1221
Cfr10I RCCGGY 2 cut(s) 113, 370
Cfr13I GGNCC 2 cut(s) 692, 836
Csp6I GTAC 6 cut(s) 111, 523, 1178, 1357, 1429, 1872
CspAI ACCGGT 1 cut(s) 113
CspCI CAANNNNNGTGG 2 cut(s) 1438, 1473
CviAII CATG 7 cut(s) 232, 397, 1222, 1315, 1462, 1742, 1897
CviQI GTAC 6 cut(s) 111, 523, 1178, 1357, 1429, 1872
DpnI GATC 8 cut(s) 90, 124, 885, 1149, 1302, 1327, 1803, 1926
DpnII GATC 8 cut(s) 88, 122, 883, 1147, 1300, 1325, 1801, 1924
DraI TTTAAA 2 cut(s) 309, 324
EaeI YGGCCR 2 cut(s) 1142, 1171
Eam1104I CTCTTC 2 cut(s) 34, 853
EarI CTCTTC 2 cut(s) 34, 853
Eco130I CCWWGG 3 cut(s) 231, 1610, 1741
Eco24I GRGCYC 1 cut(s) 1383
Eco31I GGTCTC 1 cut(s) 426
Eco32I GATATC 1 cut(s) 1124
Eco47I GGWCC 1 cut(s) 692
Eco57I CTGAAG 5 cut(s) 149, 834, 1025, 1445, 1769
EcoRI GAATTC 1 cut(s) 1664
EcoRII CCWGG 1 cut(s) 1074
EcoRV GATATC 1 cut(s) 1124
EcoT14I CCWWGG 3 cut(s) 231, 1610, 1741
EcoT38I GRGCYC 1 cut(s) 1383
ErhI CCWWGG 3 cut(s) 231, 1610, 1741
FaeI CATG 7 cut(s) 235, 400, 1225, 1318, 1465, 1745, 1900
FalI AAGNNNNNCTT 2 cut(s) 1892, 1924
FaqI GGGAC 2 cut(s) 67, 1708
FatI CATG 7 cut(s) 231, 396, 1221, 1314, 1461, 1741, 1896
FauI CCCGC 1 cut(s) 1551
Fnu4HI GCNGC 7 cut(s) 281, 506, 979, 1010, 1285, 1466, 1469
FokI GGATG 5 cut(s) 611, 755, 1201, 1245, 1294
FriOI GRGCYC 1 cut(s) 1383
Fsp4HI GCNGC 7 cut(s) 281, 506, 979, 1010, 1285, 1466, 1469
FspBI CTAG 9 cut(s) 158, 179, 266, 284, 414, 710, 959, 1028, 1772
GluI GCNGC 7 cut(s) 281, 506, 979, 1010, 1285, 1466, 1469
GsaI CCCAGC 1 cut(s) 655
HaeIII GGCC 5 cut(s) 838, 1144, 1173, 1287, 1536
HapII CCGG 3 cut(s) 114, 371, 1145
Hin1II CATG 7 cut(s) 235, 400, 1225, 1318, 1465, 1745, 1900
HindIII AAGCTT 2 cut(s) 185, 455
HpaII CCGG 3 cut(s) 114, 371, 1145
HphI GGTGA 6 cut(s) 128, 712, 1335, 1389, 1633, 1759
Hpy166II GTNNAC 1 cut(s) 1388
Hpy188I TCNGA 7 cut(s) 55, 975, 1005, 1416, 1425, 1517, 1566
Hpy8I GTNNAC 1 cut(s) 1388
Hpy99I CGWCG 1 cut(s) 206
HpyAV CCTTC 4 cut(s) 1350, 1442, 1526, 1793
HpyCH4III ACNGT 3 cut(s) 110, 585, 908
HpyCH4IV ACGT 1 cut(s) 998
HpyF10VI GCNNNNNNNGC 1 cut(s) 566
HpySE526I ACGT 1 cut(s) 998
Hsp92II CATG 7 cut(s) 235, 400, 1225, 1318, 1465, 1745, 1900
KpnI GGTACC 1 cut(s) 1875
KroI GCCGGC 1 cut(s) 370
KroNI GCCGGC 1 cut(s) 372
Kzo9I GATC 8 cut(s) 88, 122, 883, 1147, 1300, 1325, 1801, 1924
LmnI GCTCC 2 cut(s) 203, 1281
Lsp1109I GCAGC 3 cut(s) 267, 996, 1452
LweI GCATC 2 cut(s) 683, 1623
MaeI CTAG 9 cut(s) 158, 179, 266, 284, 414, 710, 959, 1028, 1772
MaeII ACGT 1 cut(s) 998
MaeIII GTNAC 9 cut(s) 104, 399, 533, 585, 594, 620, 727, 764, 946
MalI GATC 8 cut(s) 90, 124, 885, 1149, 1302, 1327, 1803, 1926
MbiI CCGCTC 2 cut(s) 978, 1284
MboI GATC 8 cut(s) 88, 122, 883, 1147, 1300, 1325, 1801, 1924
MboII GAAGA 8 cut(s) 21, 477, 624, 696, 768, 840, 1840, 1912
MfeI CAATTG 1 cut(s) 65
MflI RGATCY 3 cut(s) 883, 1147, 1300
MhlI GDGCHC 1 cut(s) 1383
MlsI TGGCCA 1 cut(s) 1173
MluNI TGGCCA 1 cut(s) 1173
MlyI GAGTC 3 cut(s) 929, 1690, 1707
MmeI TCCRAC 1 cut(s) 1335
Mox20I TGGCCA 1 cut(s) 1173
MroNI GCCGGC 1 cut(s) 370
MroXI GAANNNNTTC 2 cut(s) 186, 1886
MscI TGGCCA 1 cut(s) 1173
MseI TTAA 5 cut(s) 308, 323, 333, 686, 830
MslI CAYNNNNRTG 2 cut(s) 615, 1731
Msp20I TGGCCA 1 cut(s) 1173
MspI CCGG 3 cut(s) 114, 371, 1145
MspR9I CCNGG 1 cut(s) 1076
MunI CAATTG 1 cut(s) 65
Mva1269I GAATGC 2 cut(s) 1049, 1170
MvaI CCWGG 1 cut(s) 1076
MwoI GCNNNNNNNGC 1 cut(s) 566
NaeI GCCGGC 1 cut(s) 372
NcoI CCATGG 2 cut(s) 231, 1741
NdeII GATC 8 cut(s) 88, 122, 883, 1147, 1300, 1325, 1801, 1924
NgoMIV GCCGGC 1 cut(s) 370
NlaIII CATG 7 cut(s) 235, 400, 1225, 1318, 1465, 1745, 1900
NlaIV GGNNCC 2 cut(s) 1739, 1873
NmuCI GTSAC 6 cut(s) 104, 399, 585, 594, 727, 946
NspI RCATGY 1 cut(s) 1465
NspV TTCGAA 1 cut(s) 1880
PaeI GCATGC 1 cut(s) 1465
PagI TCATGA 1 cut(s) 1221
PasI CCCWGGG 1 cut(s) 1075
PctI GAATGC 2 cut(s) 1049, 1170
PdiI GCCGGC 1 cut(s) 372
PdmI GAANNNNTTC 2 cut(s) 186, 1886
PfeI GAWTC 7 cut(s) 341, 461, 823, 940, 1318, 1768, 1882
PinAI ACCGGT 1 cut(s) 113
PkrI GCNGC 7 cut(s) 282, 507, 980, 1011, 1286, 1467, 1470
PleI GAGTC 3 cut(s) 928, 1690, 1707
PpsI GAGTC 3 cut(s) 928, 1690, 1707
PsiI TTATAA 1 cut(s) 1070
Psp6I CCWGG 1 cut(s) 1074
PspFI CCCAGC 1 cut(s) 651
PspGI CCWGG 1 cut(s) 1074
PspN4I GGNNCC 2 cut(s) 1739, 1873
PspPI GGNCC 2 cut(s) 692, 836
PstI CTGCAG 1 cut(s) 1599
PsuI RGATCY 3 cut(s) 883, 1147, 1300
RsaI GTAC 6 cut(s) 112, 524, 1179, 1358, 1430, 1873
RsaNI GTAC 6 cut(s) 111, 523, 1178, 1357, 1429, 1872
RseI CAYNNNNRTG 2 cut(s) 615, 1731
SaqAI TTAA 5 cut(s) 308, 323, 333, 686, 830
SatI GCNGC 7 cut(s) 281, 506, 979, 1010, 1285, 1466, 1469
Sau3AI GATC 8 cut(s) 88, 122, 883, 1147, 1300, 1325, 1801, 1924
Sau96I GGNCC 2 cut(s) 692, 836
ScaI AGTACT 2 cut(s) 524, 1358
SchI GAGTC 3 cut(s) 929, 1690, 1707
ScrFI CCNGG 1 cut(s) 1076
SduI GDGCHC 1 cut(s) 1383
SfaNI GCATC 2 cut(s) 683, 1623
SfcI CTRYAG 1 cut(s) 1595
SfuI TTCGAA 1 cut(s) 1880
SinI GGWCC 1 cut(s) 692
SmiMI CAYNNNNRTG 2 cut(s) 615, 1731
SmlI CTYRAG 1 cut(s) 1637
SmoI CTYRAG 1 cut(s) 1637
SphI GCATGC 1 cut(s) 1465
SsiI CCGC 5 cut(s) 505, 978, 1284, 1469, 1544
SspMI CTAG 9 cut(s) 158, 179, 266, 284, 414, 710, 959, 1028, 1772
StyD4I CCNGG 1 cut(s) 1074
StyI CCWWGG 3 cut(s) 231, 1610, 1741
TaaI ACNGT 3 cut(s) 110, 585, 908
TaiI ACGT 1 cut(s) 1001
TaqI TCGA 2 cut(s) 1353, 1880
TatI WGTACW 2 cut(s) 522, 1356
TauI GCSGC 4 cut(s) 508, 981, 1287, 1471
TfiI GAWTC 7 cut(s) 341, 461, 823, 940, 1318, 1768, 1882
Tru1I TTAA 5 cut(s) 308, 323, 333, 686, 830
Tru9I TTAA 5 cut(s) 308, 323, 333, 686, 830
TscAI CASTG 8 cut(s) 132, 408, 471, 622, 736, 1390, 1478, 1495
TseFI GTSAC 6 cut(s) 104, 399, 585, 594, 727, 946
TseI GCWGC 3 cut(s) 280, 1009, 1465
Tsp45I GTSAC 6 cut(s) 104, 399, 585, 594, 727, 946
TspDTI ATGAA 8 cut(s) 179, 836, 1056, 1238, 1296, 1424, 1677, 1913
TspGWI ACGGA 1 cut(s) 190
TspRI CASTG 8 cut(s) 132, 408, 471, 622, 736, 1390, 1478, 1495
VpaK11BI GGWCC 1 cut(s) 692
XapI RAATTY 8 cut(s) 57, 238, 290, 326, 988, 1132, 1483, 1664
XbaI TCTAGA 3 cut(s) 413, 958, 1771
XceI RCATGY 1 cut(s) 1465
XmnI GAANNNNTTC 2 cut(s) 186, 1886
XspI CTAG 9 cut(s) 158, 179, 266, 284, 414, 710, 959, 1028, 1772
ZrmI AGTACT 2 cut(s) 524, 1358
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.