AT5G40170

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000024
Physical Location & Seq
Reverse (-)
16064859 .. 16067628
2770 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G40170.1

Sequence Viewer

Length: 2379 bp
ATGAAATCGAATTTGGCCGTTTTCTTCATAACTTGTTTCTTCTGTTGCGTCTTTGTGACCAGCGATTCAGTTTACACTCTACCATTTCCTTTCCCACGCGATCAAGTTGAGATTCTGTTGGAATTGAAGAATGAGTTTCCATCCTTCAACTGCGACCTCACTTGGAAACTCGATTACTTTGGTCGAATGGACACTAGAGCAAATATAAGCTCCTGGACCAAAGACTCTGACTCCTTTAGTGGGGTTTCCTTTGATAGCGAGACCGGTGTGGTGAAGGAGCTGTCCCTTGGTCGTCAATGTCTTACTAGTCTCAAGGCTAATAGTAGCCTCTTCAGATTCCAACACCTCAGGTACCTCGATCTCTCTGAAAATCATTTTGACTCGTCCCCTATACCCTCTGGATTTGGTAGACTGACCTACTTGGAATCCTTGGATCTTAGCAAAAATGGGTTTATAGGAGAAGTTCCATCCTCAATAAGTAACCTAAGCCGGTTAACCAATTTAGACCTTTCATATAACAAGCTCACCGGTGGTATTCCCAATCTACATAGTTTAACCCTTCTTGAGAATATAGACCTATCATATAATAAGTTTTCTGGAGCCATTCCTTCTTACCTCTTCACCATGCCTTTTCTAGTTTCTCTTAACCTACGCCAAAACCATCTTAGTGACCCTCTTGAGAATATAAATTATTCTGCAACCTCTAAACTTTTAATTTTAGACATGGCTTATAACCTTATGAGTCATCGAATCCTAGAACCTATCTCAAAATTAGCCAACCTCATACAAATTGACTTATCTTTTCAGAAGACACCCTACACATTCAACTTTGATTTCTTGCTCTTCAAGTCTCTAGTGCGTTTGGATCTTTCCGGAAATAGTGTTTCAGTGGTTGGTACCGGTTCAGAAAATTTGACACATCTAGACTTGTCGAGCTGCAACATCACCGAGTTCCCGATGTTTATTAAGGACTTACAAAGATTATGGTGGTTAGACATTTCCAATAATAGAATTAAAGGAAAAGTGCCTGAGTTGTTATGGACTCTGCCTTCTATGCTCCATGTAAATCTCTCACGCAACTCCTTTGATTCCTTGGAAGGTACGCCAAAAATAATCCTCAATTCGTCGATTTCGGAGTTAGATTTGAGTTCAAATGCCTTCAAAGGATCTTTTCCTATTATTCCACCTTATGTCAACATCATGGCTGCATCAAATAACTATTTCACTGGAGGCATACCACTTATATTCTGCAAAAGATATCGACTCAGTCTCCTTGATCTATCAAACAACAACTTCAGTGGGACAATTCCGAGATGCTTGACAAATGTGTCACTCGGACTAGAAGCGTTGAAACTCAGTAACAACAGCCTCACTGGGAGACTTCCGGACATAGAAGACCGCTTAGTACTACTTGACGTTGGCCACAACCAAATAAGTGGGAAGCTTCCAAGGTCTCTAGTAAACTGCACAACCCTAAAGTTTCTAAATGTGGAAGGAAACCACATCAACGACACTTTCCCTTTCTGGCTGAAGGCTTTGACGCGTCTTGAAATCATTGTTCTGAGATCAAACAGATTCCACGGTCCCATTTCTTCTCCTGAGGTCTCTCTTTCATTTACGGCACTGCGGATAATTGATATTTCCCGTAACAGCTTCAACGGGAGCCTACCGCAAAACTACTTTGCGAATTGGAGTGCACCTTTGGTTAATACCCCACAAGGATATCGTTGGCCAGAGTACACAGGAGATGAACACTCTAAATATGAGACCCCGCTTTGGTCTTATCCTTCCATTCATTTGAGAATAAAAGGACGAAGCATAGAGTTGGGAAAGATTCCAGATACATACACGTCGATAGATTTCTCAGGAAATAGTTTTGAAGGACAGATTCCAGAATCAATAGGTGATTTGAAATCGTTGATTGTTCTGGACTTATCTAACAACTCTTTCACTGGTCGTATTCCATCGTCGTTGGCCAAACTTAAACAACTCGAGTCATTGGATCTATCTCAAAACCGAATCTCTGGAAATATACCTCAAGAGCTAAGAGAGCTGACGTTTTTGGGATATGTTAACATGTCACATAACAGACTCACCGGCCAAATACCACAGAGTACACAGGTTGGAGGGCAACCTAAATCCTCCTTTGAAGGGAATATCAATCTTTGTGGTCTTCCTCTTCAAGAGAGTTGTTTAAGGGGAAATGGAGTACCATCAACACCACATACACAAGAGCAAGAACTACCAAAGCAAGAACATGCGTTGAACTGGAAAGCAGCTGCGATAGGCTATGGACCCGGAGTGTTGTTTGGACTGGCGATCGGACAAGCCTTTGCTCGATACAAACCGGTCTTGTTCTATAAGTTGTTTCGACTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 LRR_4 LRR_6 LRR_8

Protein Analysis

792

Amino Acids

88.8

Weight (kDa)

6.95

Isoelectric Point (pI)

39.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 100 - 193 2.1e-12 Leucine-rich repeat region
LRR_8 PF13855 115 - 175 1.3e-06 Leucine rich repeat
LRR_8 PF13855 304 - 361 1.6e-06 Leucine rich repeat
LRR_8 PF13855 619 - 674 2.9e-08 Leucine rich repeat
LRR_14 PF23598 629 - 691 7.7e-07 Leucine-rich repeat region
LRR_4 PF12799 638 - 674 1.6e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 640 - 698 9.6e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 732
AasI GACNNNNNNGTC 1 cut(s) 1327
Acc65I GGTACC 2 cut(s) 351, 896
AccB1I GGYRCC 2 cut(s) 351, 896
AccI GTMKAC 1 cut(s) 409
AccII CGCG 2 cut(s) 99, 1543
AccIII TCCGGA 2 cut(s) 872, 1384
AciI CCGC 4 cut(s) 1399, 1627, 1670, 1772
AclWI GGATC 4 cut(s) 441, 873, 1174, 2010
AcoI YGGCCR 5 cut(s) 15, 1420, 1730, 1974, 2098
AcsI RAATTY 2 cut(s) 10, 910
AcuI CTGAAG 3 cut(s) 316, 1279, 1550
AfaI GTAC 7 cut(s) 353, 898, 1102, 1407, 1739, 2116, 2211
AfiI CCNNNNNNNGG 3 cut(s) 240, 1776, 2151
AflIII ACRYGT 3 cut(s) 1541, 1848, 2076
AgeI ACCGGT 4 cut(s) 263, 527, 899, 2347
AhlI ACTAGT 1 cut(s) 305
AjiI CACGTC 1 cut(s) 1851
AjnI CCWGG 1 cut(s) 212
AjuI GAANNNNNNNTTGG 1 cut(s) 28
AluBI AGCT 9 cut(s) 210, 280, 523, 936, 1444, 1653, 2044, 2053, 2279
AluI AGCT 9 cut(s) 210, 280, 523, 936, 1444, 1653, 2044, 2053, 2279
Alw21I GWGCWC 1 cut(s) 1699
Alw26I GTCTC 8 cut(s) 254, 314, 855, 1274, 1372, 1458, 1609, 1760
Alw44I GTGCAC 1 cut(s) 1695
AlwI GGATC 4 cut(s) 441, 873, 1174, 2010
Ama87I CYCGRG 1 cut(s) 1991
Aor13HI TCCGGA 2 cut(s) 872, 1384
AoxI GGCC 5 cut(s) 15, 1420, 1730, 1974, 2098
ApaLI GTGCAC 1 cut(s) 1695
ApeKI GCWGC 4 cut(s) 936, 1205, 2276, 2279
ApoI RAATTY 2 cut(s) 10, 910
AsiGI ACCGGT 4 cut(s) 263, 527, 899, 2347
Asp718I GGTACC 2 cut(s) 351, 896
AspS9I GGNCC 3 cut(s) 216, 1583, 2294
AsuC2I CCSGG 1 cut(s) 2298
AsuHPI GGTGA 6 cut(s) 283, 517, 613, 937, 1916, 2086
AvaI CYCGRG 1 cut(s) 1991
AvaII GGWCC 3 cut(s) 216, 1583, 2294
AxyI CCTNAGG 2 cut(s) 347, 1599
BaeGI GKGCMC 1 cut(s) 1699
BalI TGGCCA 3 cut(s) 1422, 1732, 1976
BanI GGYRCC 2 cut(s) 351, 896
BarI GAAGNNNNNNTAC 2 cut(s) 800, 832
BbsI GAAGAC 3 cut(s) 815, 1401, 2165
Bbv12I GWGCWC 1 cut(s) 1699
BbvI GCAGC 4 cut(s) 923, 1192, 2266, 2288
BccI CCATC 5 cut(s) 148, 475, 669, 1972, 2221
BceAI ACGGC 2 cut(s) 2, 1635
BciT130I CCWGG 1 cut(s) 214
BcnI CCSGG 1 cut(s) 2298
BcoDI GTCTC 8 cut(s) 254, 314, 855, 1274, 1372, 1458, 1609, 1760
BcuI ACTAGT 1 cut(s) 305
BfaI CTAG 8 cut(s) 195, 306, 635, 755, 854, 923, 1340, 1457
BisI GCNGC 4 cut(s) 937, 1206, 2277, 2280
BlsI GCNGC 4 cut(s) 938, 1207, 2278, 2281
BmcAI AGTACT 1 cut(s) 1407
Bme1390I CCNGG 2 cut(s) 214, 2298
Bme18I GGWCC 3 cut(s) 216, 1583, 2294
BmeT110I CYCGRG 1 cut(s) 1991
BmgBI CACGTC 1 cut(s) 1851
BmgT120I GGNCC 3 cut(s) 216, 1583, 2294
BmiI GGNNCC 6 cut(s) 353, 601, 898, 1585, 1664, 2296
BmrFI CCNGG 2 cut(s) 214, 2298
BmrI ACTGGG 1 cut(s) 1383
BmsI GCATC 2 cut(s) 1217, 1304
BmuI ACTGGG 1 cut(s) 1383
BpiI GAAGAC 3 cut(s) 815, 1401, 2165
BpmI CTGGAG 2 cut(s) 618, 1248
Bpu10I CCTNAGC 1 cut(s) 485
BpuEI CTTGAG 4 cut(s) 296, 584, 698, 2022
BpuMI CCSGG 1 cut(s) 2298
BsaI GGTCTC 4 cut(s) 254, 1458, 1609, 1760
BsaJI CCNNGG 5 cut(s) 286, 429, 1092, 1448, 1579
BsaWI WCCGGW 6 cut(s) 263, 527, 872, 899, 1384, 2347
BsaXI ACNNNNNCTCC 4 cut(s) 215, 245, 1254, 1284
Bsc4I CCNNNNNNNGG 3 cut(s) 240, 1776, 2151
Bse118I RCCGGY 6 cut(s) 263, 489, 527, 899, 2096, 2347
Bse1I ACTGG 5 cut(s) 1231, 1378, 1957, 2273, 2319
Bse21I CCTNAGG 2 cut(s) 347, 1599
BseAI TCCGGA 2 cut(s) 872, 1384
BseBI CCWGG 1 cut(s) 214
BseDI CCNNGG 5 cut(s) 286, 429, 1092, 1448, 1579
BseGI GGATG 2 cut(s) 140, 467
BseLI CCNNNNNNNGG 3 cut(s) 240, 1776, 2151
BseMII CTCAG 7 cut(s) 361, 1020, 1279, 1369, 1553, 1590, 1878
BseNI ACTGG 5 cut(s) 1231, 1378, 1957, 2273, 2319
BseSI GKGCMC 1 cut(s) 1699
BseXI GCAGC 4 cut(s) 923, 1192, 2266, 2288
BsgI GTGCAG 1 cut(s) 1450
Bsh1236I CGCG 2 cut(s) 99, 1543
Bsh1285I CGRYCG 1 cut(s) 2322
BshFI GGCC 5 cut(s) 17, 1422, 1732, 1976, 2100
BshNI GGYRCC 2 cut(s) 351, 896
BshTI ACCGGT 4 cut(s) 263, 527, 899, 2347
BsiEI CGRYCG 1 cut(s) 2322
BsiHKAI GWGCWC 1 cut(s) 1699
BsiHKCI CYCGRG 1 cut(s) 1991
BsiSI CCGG 9 cut(s) 264, 490, 528, 873, 900, 1385, 2097, 2298, 2348
BslFI GGGAC 4 cut(s) 268, 370, 1315, 1569
BslI CCNNNNNNNGG 3 cut(s) 240, 1776, 2151
BsmAI GTCTC 8 cut(s) 254, 314, 855, 1274, 1372, 1458, 1609, 1760
BsmFI GGGAC 4 cut(s) 268, 370, 1315, 1569
BsnI GGCC 5 cut(s) 17, 1422, 1732, 1976, 2100
Bso31I GGTCTC 4 cut(s) 254, 1458, 1609, 1760
BsoBI CYCGRG 1 cut(s) 1991
Bsp1286I GDGCHC 1 cut(s) 1699
Bsp13I TCCGGA 2 cut(s) 872, 1384
Bsp143I GATC 9 cut(s) 100, 358, 433, 865, 1166, 1276, 1565, 2002, 2319
BspACI CCGC 4 cut(s) 1399, 1627, 1670, 1772
BspANI GGCC 5 cut(s) 17, 1422, 1732, 1976, 2100
BspCNI CTCAG 7 cut(s) 360, 1021, 1278, 1368, 1554, 1591, 1877
BspEI TCCGGA 2 cut(s) 872, 1384
BspFNI CGCG 2 cut(s) 99, 1543
BspLI GGNNCC 6 cut(s) 353, 601, 898, 1585, 1664, 2296
BspPI GGATC 4 cut(s) 441, 873, 1174, 2010
BspQI GCTCTTC 1 cut(s) 848
BspT107I GGYRCC 2 cut(s) 351, 896
BspTNI GGTCTC 4 cut(s) 254, 1458, 1609, 1760
BsrFI RCCGGY 6 cut(s) 263, 489, 527, 899, 2096, 2347
BsrI ACTGG 5 cut(s) 1231, 1378, 1957, 2273, 2319
BssAI RCCGGY 6 cut(s) 263, 489, 527, 899, 2096, 2347
BssECI CCNNGG 5 cut(s) 286, 429, 1092, 1448, 1579
BssMI GATC 9 cut(s) 100, 358, 433, 865, 1166, 1276, 1565, 2002, 2319
BssT1I CCWWGG 4 cut(s) 286, 429, 1092, 1448
Bst2UI CCWGG 1 cut(s) 214
Bst4CI ACNGT 1 cut(s) 1583
Bst6I CTCTTC 4 cut(s) 335, 623, 848, 2184
BstDSI CCRYGG 1 cut(s) 1579
BstF5I GGATG 2 cut(s) 140, 467
BstFNI CGCG 2 cut(s) 99, 1543
BstKTI GATC 9 cut(s) 103, 361, 436, 868, 1169, 1279, 1568, 2005, 2322
BstMAI GTCTC 8 cut(s) 254, 314, 855, 1274, 1372, 1458, 1609, 1760
BstMBI GATC 9 cut(s) 100, 358, 433, 865, 1166, 1276, 1565, 2002, 2319
BstMCI CGRYCG 1 cut(s) 2322
BstMWI GCNNNNNNNGC 2 cut(s) 1054, 2050
BstNI CCWGG 1 cut(s) 214
BstNSI RCATGY 2 cut(s) 2080, 2261
BstSCI CCNGG 2 cut(s) 212, 2296
BstSLI GKGCMC 1 cut(s) 1699
BstUI CGCG 2 cut(s) 99, 1543
BstV1I GCAGC 4 cut(s) 923, 1192, 2266, 2288
BstV2I GAAGAC 3 cut(s) 815, 1401, 2165
BstX2I RGATCY 4 cut(s) 433, 865, 1166, 2002
BstXI CCANNNNNNTGG 1 cut(s) 1436
BstYI RGATCY 4 cut(s) 433, 865, 1166, 2002
Bsu36I CCTNAGG 2 cut(s) 347, 1599
BsuRI GGCC 5 cut(s) 17, 1422, 1732, 1976, 2100
BtgI CCRYGG 1 cut(s) 1579
BtrI CACGTC 1 cut(s) 1851
BtsCI GGATG 2 cut(s) 140, 467
BtsI GCAGTG 1 cut(s) 1622
BtsIMutI CAGTG 6 cut(s) 894, 1224, 1303, 1371, 1622, 1950
Cfr10I RCCGGY 6 cut(s) 263, 489, 527, 899, 2096, 2347
Cfr13I GGNCC 3 cut(s) 216, 1583, 2294
CseI GACGC 3 cut(s) 37, 1532, 1549
Csp6I GTAC 7 cut(s) 352, 897, 1101, 1406, 1738, 2115, 2210
CspAI ACCGGT 4 cut(s) 263, 527, 899, 2347
CspCI CAANNNNNGTGG 4 cut(s) 1279, 1314, 2149, 2184
CviAII CATG 6 cut(s) 625, 724, 1061, 1201, 2077, 2258
CviQI GTAC 7 cut(s) 352, 897, 1101, 1406, 1738, 2115, 2210
DpnI GATC 9 cut(s) 102, 360, 435, 867, 1168, 1278, 1567, 2004, 2321
DpnII GATC 9 cut(s) 100, 358, 433, 865, 1166, 1276, 1565, 2002, 2319
DrdI GACNNNNNNGTC 1 cut(s) 1327
DseDI GACNNNNNNGTC 1 cut(s) 1327
EaeI YGGCCR 5 cut(s) 15, 1420, 1730, 1974, 2098
Eam1104I CTCTTC 4 cut(s) 335, 623, 848, 2184
EarI CTCTTC 4 cut(s) 335, 623, 848, 2184
Eco130I CCWWGG 4 cut(s) 286, 429, 1092, 1448
Eco31I GGTCTC 4 cut(s) 254, 1458, 1609, 1760
Eco32I GATATC 2 cut(s) 1259, 1724
Eco47I GGWCC 3 cut(s) 216, 1583, 2294
Eco57I CTGAAG 3 cut(s) 316, 1279, 1550
Eco81I CCTNAGG 2 cut(s) 347, 1599
Eco88I CYCGRG 1 cut(s) 1991
EcoRII CCWGG 1 cut(s) 212
EcoRV GATATC 2 cut(s) 1259, 1724
EcoT14I CCWWGG 4 cut(s) 286, 429, 1092, 1448
ErhI CCWWGG 4 cut(s) 286, 429, 1092, 1448
FaeI CATG 6 cut(s) 628, 727, 1064, 1204, 2080, 2261
FaqI GGGAC 4 cut(s) 268, 370, 1315, 1569
FatI CATG 6 cut(s) 624, 723, 1060, 1200, 2076, 2257
FauI CCCGC 1 cut(s) 1779
FblI GTMKAC 1 cut(s) 409
Fnu4HI GCNGC 4 cut(s) 937, 1206, 2277, 2280
FokI GGATG 2 cut(s) 127, 454
Fsp4HI GCNGC 4 cut(s) 937, 1206, 2277, 2280
FspBI CTAG 8 cut(s) 195, 306, 635, 755, 854, 923, 1340, 1457
GluI GCNGC 4 cut(s) 937, 1206, 2277, 2280
GsuI CTGGAG 2 cut(s) 618, 1248
HaeIII GGCC 5 cut(s) 17, 1422, 1732, 1976, 2100
HapII CCGG 9 cut(s) 264, 490, 528, 873, 900, 1385, 2097, 2298, 2348
HgaI GACGC 3 cut(s) 37, 1532, 1549
Hin1II CATG 6 cut(s) 628, 727, 1064, 1204, 2080, 2261
HincII GTYRAC 3 cut(s) 495, 1195, 2074
HindII GTYRAC 3 cut(s) 495, 1195, 2074
HindIII AAGCTT 1 cut(s) 1442
HpaI GTTAAC 2 cut(s) 495, 2074
HpaII CCGG 9 cut(s) 264, 490, 528, 873, 900, 1385, 2097, 2298, 2348
HphI GGTGA 6 cut(s) 283, 517, 613, 937, 1916, 2086
Hpy166II GTNNAC 9 cut(s) 73, 410, 495, 1195, 1462, 1697, 1740, 2074, 2117
Hpy8I GTNNAC 9 cut(s) 73, 410, 495, 1195, 1462, 1697, 1740, 2074, 2117
Hpy99I CGWCG 3 cut(s) 1129, 1855, 1972
HpyCH4III ACNGT 1 cut(s) 1583
HpyCH4IV ACGT 3 cut(s) 1416, 1850, 2057
HpyCH4V TGCA 6 cut(s) 698, 939, 1208, 1251, 1467, 1697
HpyF10VI GCNNNNNNNGC 2 cut(s) 1054, 2050
HpySE526I ACGT 3 cut(s) 1416, 1850, 2057
Hsp92II CATG 6 cut(s) 628, 727, 1064, 1204, 2080, 2261
Kpn2I TCCGGA 2 cut(s) 872, 1384
KpnI GGTACC 2 cut(s) 355, 900
KspAI GTTAAC 2 cut(s) 495, 2074
Kzo9I GATC 9 cut(s) 100, 358, 433, 865, 1166, 1276, 1565, 2002, 2319
LguI GCTCTTC 1 cut(s) 848
LmnI GCTCC 5 cut(s) 215, 277, 599, 1062, 1662
Lsp1109I GCAGC 4 cut(s) 923, 1192, 2266, 2288
LweI GCATC 2 cut(s) 1217, 1304
MaeI CTAG 8 cut(s) 195, 306, 635, 755, 854, 923, 1340, 1457
MaeII ACGT 3 cut(s) 1416, 1850, 2057
MaeIII GTNAC 7 cut(s) 55, 479, 668, 1329, 1358, 1646, 2079
MalI GATC 9 cut(s) 102, 360, 435, 867, 1168, 1278, 1567, 2004, 2321
MboI GATC 9 cut(s) 100, 358, 433, 865, 1166, 1276, 1565, 2002, 2319
MflI RGATCY 4 cut(s) 433, 865, 1166, 2002
MhlI GDGCHC 1 cut(s) 1699
MlsI TGGCCA 3 cut(s) 1422, 1732, 1976
MluI ACGCGT 1 cut(s) 1541
MluNI TGGCCA 3 cut(s) 1422, 1732, 1976
MlyI GAGTC 8 cut(s) 218, 224, 374, 751, 1036, 1257, 2003, 2085
MmeI TCCRAC 3 cut(s) 99, 364, 2104
Mox20I TGGCCA 3 cut(s) 1422, 1732, 1976
MroI TCCGGA 2 cut(s) 872, 1384
MscI TGGCCA 3 cut(s) 1422, 1732, 1976
MslI CAYNNNNRTG 1 cut(s) 666
Msp20I TGGCCA 3 cut(s) 1422, 1732, 1976
MspA1I CMGCKG 1 cut(s) 2279
MspI CCGG 9 cut(s) 264, 490, 528, 873, 900, 1385, 2097, 2298, 2348
MspR9I CCNGG 2 cut(s) 214, 2298
MvaI CCWGG 1 cut(s) 214
MvnI CGCG 2 cut(s) 99, 1543
MwoI GCNNNNNNNGC 2 cut(s) 1054, 2050
NciI CCSGG 1 cut(s) 2298
NdeII GATC 9 cut(s) 100, 358, 433, 865, 1166, 1276, 1565, 2002, 2319
NlaIII CATG 6 cut(s) 628, 727, 1064, 1204, 2080, 2261
NlaIV GGNNCC 6 cut(s) 353, 601, 898, 1585, 1664, 2296
NmuCI GTSAC 4 cut(s) 55, 668, 1329, 2079
NspI RCATGY 2 cut(s) 2080, 2261
PaeR7I CTCGAG 1 cut(s) 1991
PciI ACATGT 1 cut(s) 2076
PciSI GCTCTTC 1 cut(s) 848
PflFI GACNNNGTC 1 cut(s) 1266
PfoI TCCNGGA 1 cut(s) 212
PinAI ACCGGT 4 cut(s) 263, 527, 899, 2347
PkrI GCNGC 4 cut(s) 938, 1207, 2278, 2281
Ple19I CGATCG 1 cut(s) 2322
PleI GAGTC 8 cut(s) 218, 224, 374, 750, 1036, 1257, 2002, 2085
PpsI GAGTC 8 cut(s) 218, 224, 374, 750, 1036, 1257, 2002, 2085
PscI ACATGT 1 cut(s) 2076
PsiI TTATAA 1 cut(s) 732
Psp6I CCWGG 1 cut(s) 212
PspGI CCWGG 1 cut(s) 212
PspN4I GGNNCC 6 cut(s) 353, 601, 898, 1585, 1664, 2296
PspPI GGNCC 3 cut(s) 216, 1583, 2294
PspXI VCTCGAGB 1 cut(s) 1991
PsuI RGATCY 4 cut(s) 433, 865, 1166, 2002
PsyI GACNNNGTC 1 cut(s) 1266
PvuI CGATCG 1 cut(s) 2322
PvuII CAGCTG 1 cut(s) 2279
RsaI GTAC 7 cut(s) 353, 898, 1102, 1407, 1739, 2116, 2211
RsaNI GTAC 7 cut(s) 352, 897, 1101, 1406, 1738, 2115, 2210
RseI CAYNNNNRTG 1 cut(s) 666
SapI GCTCTTC 1 cut(s) 848
SatI GCNGC 4 cut(s) 937, 1206, 2277, 2280
Sau3AI GATC 9 cut(s) 100, 358, 433, 865, 1166, 1276, 1565, 2002, 2319
Sau96I GGNCC 3 cut(s) 216, 1583, 2294
ScaI AGTACT 1 cut(s) 1407
SchI GAGTC 8 cut(s) 218, 224, 374, 751, 1036, 1257, 2003, 2085
ScrFI CCNGG 2 cut(s) 214, 2298
SduI GDGCHC 1 cut(s) 1699
SfaNI GCATC 2 cut(s) 1217, 1304
Sfr274I CTCGAG 1 cut(s) 1991
SgrAI CRCCGGYG 1 cut(s) 527
SinI GGWCC 3 cut(s) 216, 1583, 2294
SlaI CTCGAG 1 cut(s) 1991
SmiMI CAYNNNNRTG 1 cut(s) 666
SmlI CTYRAG 5 cut(s) 311, 563, 677, 1991, 2037
SmoI CTYRAG 5 cut(s) 311, 563, 677, 1991, 2037
SpeI ACTAGT 1 cut(s) 305
SsiI CCGC 4 cut(s) 1399, 1627, 1670, 1772
SspMI CTAG 8 cut(s) 195, 306, 635, 755, 854, 923, 1340, 1457
StyD4I CCNGG 2 cut(s) 212, 2296
StyI CCWWGG 4 cut(s) 286, 429, 1092, 1448
TaaI ACNGT 1 cut(s) 1583
TaiI ACGT 3 cut(s) 1419, 1853, 2060
TatI WGTACW 3 cut(s) 1405, 1737, 2114
TscAI CASTG 6 cut(s) 894, 1231, 1303, 1378, 1629, 1957
TseFI GTSAC 4 cut(s) 55, 668, 1329, 2079
TseI GCWGC 4 cut(s) 936, 1205, 2276, 2279
Tsp45I GTSAC 4 cut(s) 55, 668, 1329, 2079
TspDTI ATGAA 6 cut(s) 16, 17, 501, 1602, 1764, 1784
TspRI CASTG 6 cut(s) 894, 1231, 1303, 1378, 1629, 1957
Tth111I GACNNNGTC 1 cut(s) 1266
VneI GTGCAC 1 cut(s) 1695
VpaK11BI GGWCC 3 cut(s) 216, 1583, 2294
XapI RAATTY 2 cut(s) 10, 910
XbaI TCTAGA 1 cut(s) 922
XceI RCATGY 2 cut(s) 2080, 2261
XhoI CTCGAG 1 cut(s) 1991
XmiI GTMKAC 1 cut(s) 409
XspI CTAG 8 cut(s) 195, 306, 635, 755, 854, 923, 1340, 1457
ZrmI AGTACT 1 cut(s) 1407
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.