MD07G1069600.v1.1

Receptor-like protein 12

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
6580255 .. 6583343
3089 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1069600.v1.1.491

Sequence Viewer

Length: 1926 bp
ATGGGATCCCGCCGGTGCTTGTTTGTGTCCAATATGTGTTATATACTTTCAAAAGTTGTGTTGTTTCATCTCATGGTTGTTAGCTCATCAGTTTCCTCATTGCAGCAATCTTGTCGTGACGAGGAGAGGTCTGCCTTGCTGCAATTCAAGGAAAGCTTCATCATTAACAGATCTGCCTTGTATTCTGATGACGCTTATCCAAAGATTTTGCAATGGAAACTAGCTGAGGGACAAAATGGCAACTGCTGTGCATGGGATGGCATTGTGTGTGACGAGAGGACGGGTCATGTGATTGGCCTTGATCTTAGTAGCAGCTGTCTCCTGGGCCCTATCAACTCCAACAGCAGCCTTTTCCGGCTTGATCAGCTTCAAGTGCTGAACCTTGCTGAAAGTATGAATGCAAGCCTACTTCCAAAGTTAAACTTTCTAGGATTGGGTTCGTGCAACATAAGAGAGTTCCCAAGTTTCCTGCAGTATCAAGAAGGATTGGTGTACTTGGACCTTTCCAACAACCATTTGCATGGTGAAGTGCCAAAATGGATGTTGAACACAAGCACAAAGACTTTGACGTTCATGGACATTTCTCACAACTCCCTTTCAAGCATTGTCCAGCATTCAAATGCCTTTCCTTGGGTTAATCTACAAGTTTTAGAGCTCCAGCATAACATGCTACATGGGCCGCTACTGATGCCTCCACCACACACAGTTCGCTATCATGTTGCAAACAACAATCTAAATGGAACAATTTCACCACTGATCTGTAGTCTGACTTCTCTTCAGCACCTTGATCTCTCCAACAACAATATGAGTGGAATGCTTCCCCCCTGTCTCGGAAACTTCAGCGCTGATCTGCGAGTTTTAAGAATTGGAAACAACTCTTTCAGCGGCTTTCTTCCTGAAACATACACCAACACAAGCAGTCTGATGTTGATTGATGTTAGTCATAACCAATTGCGAGGGCAACTACCAAGGTCTTTGGGGAACTGCATAAGACTTGAGTTTATTGATCTGTCATACAATAAATTCAGCGATGTTTTTCCCTTTTGGTTGGGGGCTCTTCCAGAGTTAAAACTTTTGGCAATGCACCAGAATGCGTTCTACGGTCTGATAGAGGAACCTGCTCGGGACAATGTTGAATATTTCCCTGAGTTGCGAATTCTGGATCTATCTTCTAATAGTTTCAGAGGCAAGTTTCCATCTCAAAACATCTTTTCCGGGAATGTCATGAGGGGTGTCACTCGAAACCAGTCGACATATATGAAGGCACGCACATTTATCGATGCTCCTAGTCTTCGGCTGAACTTTCATATATATTACTCAAGCACGATAACTAGCAAAAGTGTGGAGAGATATTATCCGAAGATTCACGAAGCCTTTGCAGTGATTGACATCTCTAGCAACAAATTTGAAGGGAGGATTCCTGAATTTATTGGGAACCTAGAGGGGTTGATCTCATTCAATATATCTGGTAACCTCCTAACTGGTCCCATCCCATCATCTTTCGGGAATTTAAGAAGGCTTGAATCACTGGACCTTTCACACAACAAGCTTTCAGGACAAATCCCTCAAAGCCTCACGCAGCTTACATTCCTTGCAGTATTCATTGTCTCTAACAACAGTTTGACAGGTCCAATACCGCATGGAACCCAACTTACTTCATTCAATAGCAGTTCATATGAAGGAAACCCTGGATTGTGTGGAGATCCTTTGCCAAAGAAATGCAGAGATCCCAAGGCTCCTCGCCTGTCACCTTCAAAAACCGAAGAAAATGATTCAGGCTCGTTTGAATTTGATTGGAAATTTGTTTTGGCTGGTCTCGGAAGTGGGTTGGTAGTGGGAGTTGTTCTTTCTGATGTGGTGATCACAAAGAAGCATGAATGGTTGTTTTTGTTGAAACCCATCAAGCTGATGATAGGAACTTCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

642

Amino Acids

71.45

Weight (kDa)

7.0

Isoelectric Point (pI)

45.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 284 - 342 9e-07 Leucine rich repeat
LRR_8 PF13855 461 - 517 3.2e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1126
AccI GTMKAC 1 cut(s) 1250
AciI CCGC 4 cut(s) 10, 680, 885, 1637
AclWI GGATC 4 cut(s) 13, 1170, 1697, 1721
AcsI RAATTY 7 cut(s) 1022, 1155, 1403, 1424, 1507, 1787, 1799
AcuI CTGAAG 2 cut(s) 761, 823
AfaI GTAC 1 cut(s) 494
AfeI AGCGCT 1 cut(s) 844
AfiI CCNNNNNNNGG 2 cut(s) 630, 830
AjnI CCWGG 2 cut(s) 321, 1687
AjuI GAANNNNNNNTTGG 2 cut(s) 1790, 1822
AluBI AGCT 9 cut(s) 84, 156, 224, 315, 367, 655, 1549, 1582, 1906
AluI AGCT 9 cut(s) 84, 156, 224, 315, 367, 655, 1549, 1582, 1906
Alw21I GWGCWC 1 cut(s) 657
Alw26I GTCTC 4 cut(s) 323, 833, 1612, 1820
AlwI GGATC 4 cut(s) 13, 1170, 1697, 1721
Ama87I CYCGRG 1 cut(s) 1122
Aor51HI AGCGCT 1 cut(s) 844
AoxI GGCC 3 cut(s) 295, 325, 677
ApaI GGGCCC 1 cut(s) 329
ApeKI GCWGC 5 cut(s) 103, 139, 312, 345, 1579
ApoI RAATTY 7 cut(s) 1022, 1155, 1403, 1424, 1507, 1787, 1799
Asp700I GAANNNNTTC 2 cut(s) 745, 1094
AspLEI GCGC 1 cut(s) 845
AspS9I GGNCC 7 cut(s) 325, 326, 499, 677, 1484, 1531, 1628
AsuC2I CCSGG 1 cut(s) 1216
AsuHPI GGTGA 4 cut(s) 536, 741, 1740, 1870
AvaI CYCGRG 1 cut(s) 1122
AvaII GGWCC 4 cut(s) 499, 1484, 1531, 1628
BaeGI GKGCMC 1 cut(s) 329
BamHI GGATCC 1 cut(s) 5
BanII GRGCYC 3 cut(s) 329, 657, 1057
BarI GAAGNNNNNNTAC 2 cut(s) 754, 786
BbsI GAAGAC 1 cut(s) 1283
Bbv12I GWGCWC 1 cut(s) 657
BbvCI CCTCAGC 1 cut(s) 225
BbvI GCAGC 5 cut(s) 115, 126, 324, 357, 1591
BccI CCATC 5 cut(s) 251, 1204, 1496, 1501, 1907
BcgI CGANNNNNNTGC 6 cut(s) 95, 129, 1258, 1292, 1358, 1392
BciT130I CCWGG 2 cut(s) 323, 1689
BclI TGATCA 2 cut(s) 361, 1860
BcnI CCSGG 1 cut(s) 1216
BcoDI GTCTC 4 cut(s) 323, 833, 1612, 1820
BfaI CTAG 6 cut(s) 221, 428, 1287, 1332, 1395, 1439
BfmI CTRYAG 2 cut(s) 470, 760
BfoI RGCGCY 1 cut(s) 846
BfuAI ACCTGC 1 cut(s) 1126
BglII AGATCT 1 cut(s) 170
BisI GCNGC 7 cut(s) 104, 140, 313, 346, 680, 886, 1580
BlsI GCNGC 7 cut(s) 105, 141, 314, 347, 681, 887, 1581
Bme1390I CCNGG 3 cut(s) 323, 1216, 1689
Bme18I GGWCC 4 cut(s) 499, 1484, 1531, 1628
BmeT110I CYCGRG 1 cut(s) 1122
BmgT120I GGNCC 7 cut(s) 325, 326, 499, 677, 1484, 1531, 1628
BmiI GGNNCC 7 cut(s) 7, 327, 1116, 1436, 1486, 1645, 1737
BmrFI CCNGG 3 cut(s) 323, 1216, 1689
BmsI GCATC 2 cut(s) 678, 1270
BpiI GAAGAC 1 cut(s) 1283
BpmI CTGGAG 1 cut(s) 641
Bpu10I CCTNAGC 1 cut(s) 225
BpuEI CTTGAG 2 cut(s) 1016, 1303
BpuMI CCSGG 1 cut(s) 1216
Bsa29I ATCGAT 1 cut(s) 1278
BsaBI GATNNNNATC 1 cut(s) 1388
BsaI GGTCTC 1 cut(s) 1820
BsaJI CCNNGG 5 cut(s) 322, 629, 968, 1687, 1731
Bsc4I CCNNNNNNNGG 2 cut(s) 630, 830
Bse118I RCCGGY 1 cut(s) 12
Bse1I ACTGG 3 cut(s) 1246, 1486, 1533
Bse3DI GCAATG 3 cut(s) 98, 218, 1086
Bse8I GATNNNNATC 1 cut(s) 1388
BseBI CCWGG 2 cut(s) 323, 1689
BseCI ATCGAT 1 cut(s) 1278
BseDI CCNNGG 5 cut(s) 322, 629, 968, 1687, 1731
BseGI GGATG 3 cut(s) 262, 546, 1488
BseJI GATNNNNATC 1 cut(s) 1388
BseLI CCNNNNNNNGG 2 cut(s) 630, 830
BseMI GCAATG 3 cut(s) 98, 218, 1086
BseMII CTCAG 2 cut(s) 216, 1137
BseNI ACTGG 3 cut(s) 1246, 1486, 1533
BseRI GAGGAG 2 cut(s) 137, 1728
BseSI GKGCMC 1 cut(s) 329
BseXI GCAGC 5 cut(s) 115, 126, 324, 357, 1591
BshFI GGCC 3 cut(s) 297, 327, 679
BshVI ATCGAT 1 cut(s) 1278
BsiHKAI GWGCWC 1 cut(s) 657
BsiHKCI CYCGRG 1 cut(s) 1122
BsiSI CCGG 3 cut(s) 13, 355, 1215
BslFI GGGAC 3 cut(s) 243, 1139, 1470
BslI CCNNNNNNNGG 2 cut(s) 630, 830
BsmAI GTCTC 4 cut(s) 323, 833, 1612, 1820
BsmFI GGGAC 3 cut(s) 243, 1139, 1470
BsmI GAATGC 4 cut(s) 403, 613, 819, 1096
BsnI GGCC 3 cut(s) 297, 327, 679
Bso31I GGTCTC 1 cut(s) 1820
BsoBI CYCGRG 1 cut(s) 1122
Bsp120I GGGCCC 1 cut(s) 325
Bsp1286I GDGCHC 3 cut(s) 329, 657, 1057
BspACI CCGC 4 cut(s) 10, 680, 885, 1637
BspANI GGCC 3 cut(s) 297, 327, 679
BspCNI CTCAG 2 cut(s) 217, 1138
BspDI ATCGAT 1 cut(s) 1278
BspHI TCATGA 1 cut(s) 1224
BspLI GGNNCC 7 cut(s) 7, 327, 1116, 1436, 1486, 1645, 1737
BspMAI CTGCAG 1 cut(s) 474
BspMI ACCTGC 1 cut(s) 1126
BspPI GGATC 4 cut(s) 13, 1170, 1697, 1721
BspQI GCTCTTC 1 cut(s) 1062
BspTNI GGTCTC 1 cut(s) 1820
BsrDI GCAATG 3 cut(s) 98, 218, 1086
BsrFI RCCGGY 1 cut(s) 12
BsrI ACTGG 3 cut(s) 1246, 1486, 1533
BssAI RCCGGY 1 cut(s) 12
BssECI CCNNGG 5 cut(s) 322, 629, 968, 1687, 1731
BssT1I CCWWGG 3 cut(s) 629, 968, 1731
Bst2UI CCWGG 2 cut(s) 323, 1689
Bst4CI ACNGT 3 cut(s) 706, 1103, 1619
Bst6I CTCTTC 2 cut(s) 780, 1062
BstAPI GCANNNNNTGC 1 cut(s) 667
BstC8I GCNNGC 2 cut(s) 403, 1267
BstDEI CTNAG 3 cut(s) 225, 305, 1146
BstEII GGTNACC 1 cut(s) 1469
BstF5I GGATG 3 cut(s) 262, 546, 1488
BstH2I RGCGCY 1 cut(s) 846
BstHHI GCGC 1 cut(s) 845
BstMAI GTCTC 4 cut(s) 323, 833, 1612, 1820
BstMWI GCNNNNNNNGC 5 cut(s) 364, 373, 667, 676, 688
BstNI CCWGG 2 cut(s) 323, 1689
BstNSI RCATGY 1 cut(s) 670
BstPI GGTNACC 1 cut(s) 1469
BstSCI CCNGG 3 cut(s) 321, 1214, 1687
BstSFI CTRYAG 2 cut(s) 470, 760
BstSLI GKGCMC 1 cut(s) 329
BstV1I GCAGC 5 cut(s) 115, 126, 324, 357, 1591
BstV2I GAAGAC 1 cut(s) 1283
BstX2I RGATCY 5 cut(s) 5, 170, 1162, 1702, 1726
BstXI CCANNNNNNTGG 1 cut(s) 521
BstYI RGATCY 5 cut(s) 5, 170, 1162, 1702, 1726
Bsu15I ATCGAT 1 cut(s) 1278
BsuRI GGCC 3 cut(s) 297, 327, 679
BsuTUI ATCGAT 1 cut(s) 1278
BtgZI GCGATG 1 cut(s) 1044
BtsCI GGATG 3 cut(s) 262, 546, 1488
BtsI GCAGTG 1 cut(s) 1386
BtsIMutI CAGTG 3 cut(s) 752, 1386, 1526
BveI ACCTGC 1 cut(s) 1126
Cac8I GCNNGC 2 cut(s) 403, 1267
CciI TCATGA 1 cut(s) 1224
CfoI GCGC 1 cut(s) 845
Cfr10I RCCGGY 1 cut(s) 12
Cfr13I GGNCC 7 cut(s) 325, 326, 499, 677, 1484, 1531, 1628
ClaI ATCGAT 1 cut(s) 1278
CseI GACGC 1 cut(s) 200
Csp6I GTAC 1 cut(s) 493
CspCI CAANNNNNGTGG 2 cut(s) 790, 825
CviQI GTAC 1 cut(s) 493
DdeI CTNAG 3 cut(s) 225, 305, 1146
Eam1104I CTCTTC 2 cut(s) 780, 1062
EarI CTCTTC 2 cut(s) 780, 1062
Ecl136II GAGCTC 1 cut(s) 655
Eco130I CCWWGG 3 cut(s) 629, 968, 1731
Eco24I GRGCYC 3 cut(s) 329, 657, 1057
Eco31I GGTCTC 1 cut(s) 1820
Eco47I GGWCC 4 cut(s) 499, 1484, 1531, 1628
Eco47III AGCGCT 1 cut(s) 844
Eco53kI GAGCTC 1 cut(s) 655
Eco57I CTGAAG 2 cut(s) 761, 823
Eco88I CYCGRG 1 cut(s) 1122
Eco91I GGTNACC 1 cut(s) 1469
EcoICRI GAGCTC 1 cut(s) 655
EcoO109I RGGNCCY 1 cut(s) 326
EcoO65I GGTNACC 1 cut(s) 1469
EcoRI GAATTC 1 cut(s) 1155
EcoRII CCWGG 2 cut(s) 321, 1687
EcoT14I CCWWGG 3 cut(s) 629, 968, 1731
EcoT38I GRGCYC 3 cut(s) 329, 657, 1057
ErhI CCWWGG 3 cut(s) 629, 968, 1731
FalI AAGNNNNNCTT 4 cut(s) 140, 172, 407, 439
FaqI GGGAC 3 cut(s) 243, 1139, 1470
FauI CCCGC 1 cut(s) 17
FauNDI CATATG 1 cut(s) 1675
FbaI TGATCA 2 cut(s) 361, 1860
FblI GTMKAC 1 cut(s) 1250
Fnu4HI GCNGC 7 cut(s) 104, 140, 313, 346, 680, 886, 1580
FokI GGATG 3 cut(s) 269, 553, 1475
FriOI GRGCYC 3 cut(s) 329, 657, 1057
Fsp4HI GCNGC 7 cut(s) 104, 140, 313, 346, 680, 886, 1580
FspBI CTAG 6 cut(s) 221, 428, 1287, 1332, 1395, 1439
GlaI GCGC 1 cut(s) 844
GluI GCNGC 7 cut(s) 104, 140, 313, 346, 680, 886, 1580
GsuI CTGGAG 1 cut(s) 641
HaeII RGCGCY 1 cut(s) 846
HaeIII GGCC 3 cut(s) 297, 327, 679
HapII CCGG 3 cut(s) 13, 355, 1215
HgaI GACGC 1 cut(s) 200
HhaI GCGC 1 cut(s) 845
Hin6I GCGC 1 cut(s) 843
HinP1I GCGC 1 cut(s) 843
HincII GTYRAC 1 cut(s) 1251
HindII GTYRAC 1 cut(s) 1251
HindIII AAGCTT 2 cut(s) 154, 1547
HinfI GANTC 4 cut(s) 1363, 1417, 1523, 1772
HpaII CCGG 3 cut(s) 13, 355, 1215
HphI GGTGA 4 cut(s) 536, 741, 1740, 1870
Hpy166II GTNNAC 2 cut(s) 493, 1251
Hpy188I TCNGA 9 cut(s) 187, 768, 833, 924, 1107, 1184, 1359, 1820, 1852
Hpy8I GTNNAC 2 cut(s) 493, 1251
HpyAV CCTTC 6 cut(s) 476, 1255, 1403, 1509, 1673, 1761
HpyCH4III ACNGT 3 cut(s) 706, 1103, 1619
HpyCH4IV ACGT 1 cut(s) 569
HpyF10VI GCNNNNNNNGC 5 cut(s) 364, 373, 667, 676, 688
HpyF3I CTNAG 3 cut(s) 225, 305, 1146
HpySE526I ACGT 1 cut(s) 569
HspAI GCGC 1 cut(s) 843
Ksp22I TGATCA 2 cut(s) 361, 1860
LguI GCTCTTC 1 cut(s) 1062
LmnI GCTCC 3 cut(s) 660, 1288, 1741
Lsp1109I GCAGC 5 cut(s) 115, 126, 324, 357, 1591
LweI GCATC 2 cut(s) 678, 1270
MaeI CTAG 6 cut(s) 221, 428, 1287, 1332, 1395, 1439
MaeII ACGT 1 cut(s) 569
MaeIII GTNAC 5 cut(s) 116, 269, 1234, 1469, 1746
MboII GAAGA 7 cut(s) 767, 884, 1049, 1161, 1283, 1372, 1775
MfeI CAATTG 1 cut(s) 950
MflI RGATCY 5 cut(s) 5, 170, 1162, 1702, 1726
MhlI GDGCHC 3 cut(s) 329, 657, 1057
MmeI TCCRAC 3 cut(s) 363, 531, 819
MroXI GAANNNNTTC 2 cut(s) 745, 1094
MseI TTAA 6 cut(s) 165, 419, 636, 860, 1067, 1511
MslI CAYNNNNRTG 3 cut(s) 519, 618, 1089
MspA1I CMGCKG 2 cut(s) 315, 885
MspI CCGG 3 cut(s) 13, 355, 1215
MspR9I CCNGG 3 cut(s) 323, 1216, 1689
MunI CAATTG 1 cut(s) 950
Mva1269I GAATGC 4 cut(s) 403, 613, 819, 1096
MvaI CCWGG 2 cut(s) 323, 1689
MwoI GCNNNNNNNGC 5 cut(s) 364, 373, 667, 676, 688
NciI CCSGG 1 cut(s) 1216
NdeI CATATG 1 cut(s) 1675
NlaIV GGNNCC 7 cut(s) 7, 327, 1116, 1436, 1486, 1645, 1737
NmuCI GTSAC 4 cut(s) 116, 269, 1234, 1746
NspI RCATGY 1 cut(s) 670
PagI TCATGA 1 cut(s) 1224
PciSI GCTCTTC 1 cut(s) 1062
PctI GAATGC 4 cut(s) 403, 613, 819, 1096
PdmI GAANNNNTTC 2 cut(s) 745, 1094
PfeI GAWTC 4 cut(s) 1363, 1417, 1523, 1772
PfoI TCCNGGA 1 cut(s) 1214
PkrI GCNGC 7 cut(s) 105, 141, 314, 347, 681, 887, 1581
Psp124BI GAGCTC 1 cut(s) 657
Psp6I CCWGG 2 cut(s) 321, 1687
PspEI GGTNACC 1 cut(s) 1469
PspGI CCWGG 2 cut(s) 321, 1687
PspN4I GGNNCC 7 cut(s) 7, 327, 1116, 1436, 1486, 1645, 1737
PspOMI GGGCCC 1 cut(s) 325
PspPI GGNCC 7 cut(s) 325, 326, 499, 677, 1484, 1531, 1628
PsrI GAACNNNNNNTAC 2 cut(s) 1636, 1668
PstI CTGCAG 1 cut(s) 474
PsuI RGATCY 5 cut(s) 5, 170, 1162, 1702, 1726
PvuII CAGCTG 1 cut(s) 315
RsaI GTAC 1 cut(s) 494
RsaNI GTAC 1 cut(s) 493
RseI CAYNNNNRTG 3 cut(s) 519, 618, 1089
SacI GAGCTC 1 cut(s) 657
SalI GTCGAC 1 cut(s) 1249
SapI GCTCTTC 1 cut(s) 1062
SaqAI TTAA 6 cut(s) 165, 419, 636, 860, 1067, 1511
SatI GCNGC 7 cut(s) 104, 140, 313, 346, 680, 886, 1580
Sau96I GGNCC 7 cut(s) 325, 326, 499, 677, 1484, 1531, 1628
ScrFI CCNGG 3 cut(s) 323, 1216, 1689
SduI GDGCHC 3 cut(s) 329, 657, 1057
SfaNI GCATC 2 cut(s) 678, 1270
SfcI CTRYAG 2 cut(s) 470, 760
SgrAI CRCCGGYG 1 cut(s) 12
SinI GGWCC 4 cut(s) 499, 1484, 1531, 1628
SmiMI CAYNNNNRTG 3 cut(s) 519, 618, 1089
SmlI CTYRAG 2 cut(s) 995, 1318
SmoI CTYRAG 2 cut(s) 995, 1318
SsiI CCGC 4 cut(s) 10, 680, 885, 1637
SspI AATATT 1 cut(s) 1139
SspMI CTAG 6 cut(s) 221, 428, 1287, 1332, 1395, 1439
SstI GAGCTC 1 cut(s) 657
StyD4I CCNGG 3 cut(s) 321, 1214, 1687
StyI CCWWGG 3 cut(s) 629, 968, 1731
TaaI ACNGT 3 cut(s) 706, 1103, 1619
TaiI ACGT 1 cut(s) 572
TaqI TCGA 3 cut(s) 1240, 1250, 1278
TatI WGTACW 1 cut(s) 492
TauI GCSGC 2 cut(s) 682, 888
TfiI GAWTC 4 cut(s) 1363, 1417, 1523, 1772
Tru1I TTAA 6 cut(s) 165, 419, 636, 860, 1067, 1511
Tru9I TTAA 6 cut(s) 165, 419, 636, 860, 1067, 1511
TscAI CASTG 3 cut(s) 759, 1386, 1533
TseFI GTSAC 4 cut(s) 116, 269, 1234, 1746
TseI GCWGC 5 cut(s) 103, 139, 312, 345, 1579
Tsp45I GTSAC 4 cut(s) 116, 269, 1234, 1746
TspRI CASTG 3 cut(s) 759, 1386, 1533
VpaK11BI GGWCC 4 cut(s) 499, 1484, 1531, 1628
XapI RAATTY 7 cut(s) 1022, 1155, 1403, 1424, 1507, 1787, 1799
XceI RCATGY 1 cut(s) 670
XmiI GTMKAC 1 cut(s) 1250
XmnI GAANNNNTTC 2 cut(s) 745, 1094
XspI CTAG 6 cut(s) 221, 428, 1287, 1332, 1395, 1439
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.