Rw1G017610

Receptor-like protein 12

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
38865517 .. 38873015
7499 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G017610.1

Sequence Viewer

Length: 1152 bp
ATGCTGCTCATTCATGGCAACTTCCTTTCAGGCTTTGGCCAACTTCAAGCTGACCAACATCTAGTTGTTCTTCCCTGGCTTAACTTACGTATGTTGTGCTCTTCGCACAACTCCTTAGAGGGACCCTTACCAATACCTCCACCATGCATCGAAATTTATGATATCTGCCATCTGACTTCTCTTCAGTTGCTTGACTACAAGTTGAGTGGCATGCTTCCACAGTGTCTTGGATACTTTAGTGACTATCTGAAGTTTCTTGGTCTCTCAAACAATTATTTTGGTGATGTATTCCCTTTTTGGTTGGGGACTCTTCCGGAGTTAAAAGTTTTAGCATTGCGCAAGAATGGCTTCCGAGGTGTGTTAGGAAAGCCTAAATACAGTCGTGGTTTCCCCAAGTTGCGCATTTTTTATTTGTCTTACAATAATTTCACAGGTCAGTTTCTGATTGACTACATCTTTTCTGAGAATGCTATGATGAGAGTGGACATCAGTGTAAACCAGTCGACATATATGAAGGCAGACATTAATTATGGGGACAATAGCTTGATTACTTCCTTTGCCTACTCAATAAGCATTGCAGTTAAAGGTTTGGAGTTGTACTATCCATGGCTTCAAGAAGCCTTCGCAGTCATTGATATCTCAAGCAATAGATTTGAAGGGAGGATACATGAATTCATTGGGAATCTTAAAGGGCTTCGCTCTTTCAACGTCTCAAATAACATTTTCACTGGTTCCATTCCATCGTTCTTGGGGAACTTAACACTGCTTGAATCAATGGATGTTTCCCAAAACAAGCTCTCAGGGGAGATTCCTCAGCAATTAGTGAAGCTCACTTTCTTTGCCAAGTTCAATGTCTCCCACAACAATCTCACCGGTCCTATACCACATGGAACCCAACTTACCTCTTTCGACATGGCTTCCTACGAGTGCAACTCAGGATTTTGTGGAGATCCATTGCCAGTGAAATGTGGAAATCCTTCCTTTCCACCTTCAAGTGTAGAAGAAAATGATCCAATTGAATTCGATTGGAAGTTTGTTCTTACGGGGTTTGGAATTCTTGCAGACCTTTTGATCACAAGGTTTCATGAACGGTTTATCAAGATTGTTGGAATGATCACACCAATGAAAAGGCGAGGACAGAGGAGAAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

383

Amino Acids

43.31

Weight (kDa)

7.6

Isoelectric Point (pI)

38.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 338, 401
AccI GTMKAC 1 cut(s) 503
AccIII TCCGGA 1 cut(s) 313
AclWI GGATC 2 cut(s) 944, 1004
AcoI YGGCCR 1 cut(s) 37
AcsI RAATTY 4 cut(s) 153, 671, 1019, 1053
AcuI CTGAAG 2 cut(s) 167, 269
AfaI GTAC 1 cut(s) 599
AgeI ACCGGT 1 cut(s) 872
AgsI TTSAA 8 cut(s) 47, 614, 656, 706, 770, 850, 993, 1019
AjnI CCWGG 1 cut(s) 74
AluBI AGCT 4 cut(s) 50, 543, 796, 829
AluI AGCT 4 cut(s) 50, 543, 796, 829
Alw21I GWGCWC 1 cut(s) 101
Alw26I GTCTC 3 cut(s) 266, 715, 859
AlwI GGATC 2 cut(s) 944, 1004
AlwNI CAGNNNCTG 1 cut(s) 442
Aor13HI TCCGGA 1 cut(s) 313
AoxI GGCC 1 cut(s) 37
ApeKI GCWGC 1 cut(s) 4
ApoI RAATTY 4 cut(s) 153, 671, 1019, 1053
AseI ATTAAT 1 cut(s) 525
AsiGI ACCGGT 1 cut(s) 872
Asp700I GAANNNNTTC 2 cut(s) 347, 976
AspLEI GCGC 2 cut(s) 339, 402
AspS9I GGNCC 2 cut(s) 122, 875
AsuHPI GGTGA 2 cut(s) 293, 862
AvaII GGWCC 2 cut(s) 122, 875
BaeI ACNNNNGTAYC 2 cut(s) 223, 256
BalI TGGCCA 1 cut(s) 39
BarI GAAGNNNNNNTAC 2 cut(s) 648, 680
Bbv12I GWGCWC 1 cut(s) 101
BbvCI CCTCAGC 1 cut(s) 813
BccI CCATC 2 cut(s) 177, 748
BciT130I CCWGG 1 cut(s) 76
BciVI GTATCC 2 cut(s) 224, 657
BclI TGATCA 2 cut(s) 1071, 1113
BcoDI GTCTC 3 cut(s) 266, 715, 859
BfaI CTAG 1 cut(s) 62
BfuI GTATCC 2 cut(s) 224, 657
BisI GCNGC 1 cut(s) 5
BlsI GCNGC 1 cut(s) 6
Bme1390I CCNGG 1 cut(s) 76
Bme18I GGWCC 2 cut(s) 122, 875
BmgT120I GGNCC 2 cut(s) 122, 875
BmiI GGNNCC 4 cut(s) 123, 124, 733, 892
BmrFI CCNGG 1 cut(s) 76
BmsI GCATC 1 cut(s) 156
BplI GAGNNNNNCTC 2 cut(s) 917, 949
Bpu10I CCTNAGC 1 cut(s) 813
BpuEI CTTGAG 1 cut(s) 625
BsaAI YACGTR 1 cut(s) 89
BsaI GGTCTC 1 cut(s) 266
BsaJI CCNNGG 3 cut(s) 74, 352, 605
BsaWI WCCGGW 2 cut(s) 313, 872
Bse118I RCCGGY 1 cut(s) 872
Bse1I ACTGG 3 cut(s) 499, 733, 959
Bse3DI GCAATG 3 cut(s) 332, 573, 953
BseAI TCCGGA 1 cut(s) 313
BseBI CCWGG 1 cut(s) 76
BseDI CCNNGG 3 cut(s) 74, 352, 605
BseGI GGATG 1 cut(s) 784
BseMI GCAATG 3 cut(s) 332, 573, 953
BseMII CTCAG 4 cut(s) 453, 813, 827, 948
BseNI ACTGG 3 cut(s) 499, 733, 959
BshFI GGCC 1 cut(s) 39
BshTI ACCGGT 1 cut(s) 872
BsiHKAI GWGCWC 1 cut(s) 101
BsiSI CCGG 2 cut(s) 314, 873
BslFI GGGAC 3 cut(s) 135, 319, 548
BsmAI GTCTC 3 cut(s) 266, 715, 859
BsmBI CGTCTC 1 cut(s) 715
BsmFI GGGAC 3 cut(s) 135, 319, 548
BsmI GAATGC 1 cut(s) 472
BsnI GGCC 1 cut(s) 39
Bso31I GGTCTC 1 cut(s) 266
Bsp1286I GDGCHC 1 cut(s) 101
Bsp13I TCCGGA 1 cut(s) 313
Bsp143I GATC 4 cut(s) 949, 1009, 1071, 1113
Bsp19I CCATGG 1 cut(s) 605
BspANI GGCC 1 cut(s) 39
BspCNI CTCAG 4 cut(s) 454, 812, 826, 947
BspEI TCCGGA 1 cut(s) 313
BspHI TCATGA 1 cut(s) 1084
BspLI GGNNCC 4 cut(s) 123, 124, 733, 892
BspPI GGATC 2 cut(s) 944, 1004
BspQI GCTCTTC 1 cut(s) 106
BspTNI GGTCTC 1 cut(s) 266
BsrDI GCAATG 3 cut(s) 332, 573, 953
BsrFI RCCGGY 1 cut(s) 872
BsrI ACTGG 3 cut(s) 499, 733, 959
BssAI RCCGGY 1 cut(s) 872
BssECI CCNNGG 3 cut(s) 74, 352, 605
BssMI GATC 4 cut(s) 949, 1009, 1071, 1113
BssT1I CCWWGG 1 cut(s) 605
Bst2UI CCWGG 1 cut(s) 76
Bst4CI ACNGT 3 cut(s) 222, 380, 1092
Bst6I CTCTTC 3 cut(s) 106, 186, 315
BstBAI YACGTR 1 cut(s) 89
BstC8I GCNNGC 1 cut(s) 212
BstDEI CTNAG 5 cut(s) 115, 462, 799, 813, 934
BstDSI CCRYGG 1 cut(s) 605
BstF5I GGATG 1 cut(s) 784
BstHHI GCGC 2 cut(s) 339, 402
BstKTI GATC 4 cut(s) 952, 1012, 1074, 1116
BstMAI GTCTC 3 cut(s) 266, 715, 859
BstMBI GATC 4 cut(s) 949, 1009, 1071, 1113
BstMWI GCNNNNNNNGC 1 cut(s) 345
BstNI CCWGG 1 cut(s) 76
BstNSI RCATGY 1 cut(s) 214
BstSCI CCNGG 1 cut(s) 74
BstSNI TACGTA 1 cut(s) 89
BstX2I RGATCY 1 cut(s) 949
BstYI RGATCY 1 cut(s) 949
BsuI GTATCC 2 cut(s) 224, 657
BsuRI GGCC 1 cut(s) 39
BtgI CCRYGG 1 cut(s) 605
BtsCI GGATG 1 cut(s) 784
BtsI GCAGTG 1 cut(s) 761
BtsIMutI CAGTG 5 cut(s) 227, 496, 726, 761, 966
Cac8I GCNNGC 1 cut(s) 212
CaiI CAGNNNCTG 1 cut(s) 442
CciI TCATGA 1 cut(s) 1084
CfoI GCGC 2 cut(s) 339, 402
Cfr10I RCCGGY 1 cut(s) 872
Cfr13I GGNCC 2 cut(s) 122, 875
Csp6I GTAC 1 cut(s) 598
CspAI ACCGGT 1 cut(s) 872
CspCI CAANNNNNGTGG 2 cut(s) 187, 222
CviAII CATG 8 cut(s) 14, 144, 211, 606, 668, 887, 913, 1085
CviQI GTAC 1 cut(s) 598
DdeI CTNAG 5 cut(s) 115, 462, 799, 813, 934
DpnI GATC 4 cut(s) 951, 1011, 1073, 1115
DpnII GATC 4 cut(s) 949, 1009, 1071, 1113
EaeI YGGCCR 1 cut(s) 37
Eam1104I CTCTTC 3 cut(s) 106, 186, 315
EarI CTCTTC 3 cut(s) 106, 186, 315
Eco105I TACGTA 1 cut(s) 89
Eco130I CCWWGG 1 cut(s) 605
Eco31I GGTCTC 1 cut(s) 266
Eco32I GATATC 2 cut(s) 163, 637
Eco47I GGWCC 2 cut(s) 122, 875
Eco57I CTGAAG 2 cut(s) 167, 269
EcoO109I RGGNCCY 1 cut(s) 122
EcoRI GAATTC 3 cut(s) 671, 1019, 1053
EcoRII CCWGG 1 cut(s) 74
EcoRV GATATC 2 cut(s) 163, 637
EcoT14I CCWWGG 1 cut(s) 605
EcoT22I ATGCAT 1 cut(s) 149
ErhI CCWWGG 1 cut(s) 605
Esp3I CGTCTC 1 cut(s) 715
FaeI CATG 8 cut(s) 17, 147, 214, 609, 671, 890, 916, 1088
FalI AAGNNNNNCTT 2 cut(s) 332, 364
FaqI GGGAC 3 cut(s) 135, 319, 548
FatI CATG 8 cut(s) 13, 143, 210, 605, 667, 886, 912, 1084
FbaI TGATCA 2 cut(s) 1071, 1113
FblI GTMKAC 1 cut(s) 503
Fnu4HI GCNGC 1 cut(s) 5
FokI GGATG 1 cut(s) 791
Fsp4HI GCNGC 1 cut(s) 5
FspBI CTAG 1 cut(s) 62
FspI TGCGCA 2 cut(s) 338, 401
GlaI GCGC 2 cut(s) 338, 401
GluI GCNGC 1 cut(s) 5
HaeIII GGCC 1 cut(s) 39
HapII CCGG 2 cut(s) 314, 873
HhaI GCGC 2 cut(s) 339, 402
Hin1II CATG 8 cut(s) 17, 147, 214, 609, 671, 890, 916, 1088
Hin6I GCGC 2 cut(s) 337, 400
HinP1I GCGC 2 cut(s) 337, 400
HincII GTYRAC 1 cut(s) 504
HindII GTYRAC 1 cut(s) 504
HinfI GANTC 4 cut(s) 307, 682, 770, 808
HpaII CCGG 2 cut(s) 314, 873
HphI GGTGA 2 cut(s) 293, 862
Hpy166II GTNNAC 3 cut(s) 484, 496, 504
Hpy188I TCNGA 5 cut(s) 174, 249, 353, 444, 463
Hpy188III TCNNGA 5 cut(s) 314, 614, 936, 1085, 1099
Hpy8I GTNNAC 3 cut(s) 484, 496, 504
HpyAV CCTTC 5 cut(s) 508, 631, 650, 987, 999
HpyCH4III ACNGT 3 cut(s) 222, 380, 1092
HpyCH4IV ACGT 2 cut(s) 88, 708
HpyCH4V TGCA 4 cut(s) 147, 578, 930, 1061
HpyF10VI GCNNNNNNNGC 1 cut(s) 345
HpyF3I CTNAG 5 cut(s) 115, 462, 799, 813, 934
HpySE526I ACGT 2 cut(s) 88, 708
Hsp92II CATG 8 cut(s) 17, 147, 214, 609, 671, 890, 916, 1088
HspAI GCGC 2 cut(s) 337, 400
KflI GGGWCCC 1 cut(s) 122
Kpn2I TCCGGA 1 cut(s) 313
Ksp22I TGATCA 2 cut(s) 1071, 1113
Kzo9I GATC 4 cut(s) 949, 1009, 1071, 1113
LguI GCTCTTC 1 cut(s) 106
LweI GCATC 1 cut(s) 156
MaeI CTAG 1 cut(s) 62
MaeII ACGT 2 cut(s) 88, 708
MaeIII GTNAC 1 cut(s) 239
MalI GATC 4 cut(s) 951, 1011, 1073, 1115
MboI GATC 4 cut(s) 949, 1009, 1071, 1113
MboII GAAGA 5 cut(s) 62, 93, 173, 302, 1013
MfeI CAATTG 1 cut(s) 1014
MflI RGATCY 1 cut(s) 949
MhlI GDGCHC 1 cut(s) 101
MlsI TGGCCA 1 cut(s) 39
MluCI AATT 9 cut(s) 153, 271, 424, 526, 671, 818, 1014, 1019, 1053
MluNI TGGCCA 1 cut(s) 39
MlyI GAGTC 1 cut(s) 301
MmeI TCCRAC 1 cut(s) 1087
MnlI CCTC 8 cut(s) 112, 147, 347, 654, 822, 913, 1127, 1134
Mox20I TGGCCA 1 cut(s) 39
Mph1103I ATGCAT 1 cut(s) 149
MroI TCCGGA 1 cut(s) 313
MroXI GAANNNNTTC 2 cut(s) 347, 976
MscI TGGCCA 1 cut(s) 39
MseI TTAA 6 cut(s) 81, 320, 525, 582, 687, 758
MslI CAYNNNNRTG 1 cut(s) 1121
Msp20I TGGCCA 1 cut(s) 39
MspI CCGG 2 cut(s) 314, 873
MspR9I CCNGG 1 cut(s) 76
MunI CAATTG 1 cut(s) 1014
Mva1269I GAATGC 1 cut(s) 472
MvaI CCWGG 1 cut(s) 76
MwoI GCNNNNNNNGC 1 cut(s) 345
NcoI CCATGG 1 cut(s) 605
NdeII GATC 4 cut(s) 949, 1009, 1071, 1113
NlaIII CATG 8 cut(s) 17, 147, 214, 609, 671, 890, 916, 1088
NlaIV GGNNCC 4 cut(s) 123, 124, 733, 892
NmuCI GTSAC 1 cut(s) 239
NsbI TGCGCA 2 cut(s) 338, 401
NsiI ATGCAT 1 cut(s) 149
NspI RCATGY 1 cut(s) 214
PaeI GCATGC 1 cut(s) 214
PagI TCATGA 1 cut(s) 1084
PciSI GCTCTTC 1 cut(s) 106
PctI GAATGC 1 cut(s) 472
PdmI GAANNNNTTC 2 cut(s) 347, 976
PfeI GAWTC 3 cut(s) 682, 770, 808
PinAI ACCGGT 1 cut(s) 872
PkrI GCNGC 1 cut(s) 6
PleI GAGTC 1 cut(s) 301
PpsI GAGTC 1 cut(s) 301
Ppu21I YACGTR 1 cut(s) 89
PpuMI RGGWCCY 1 cut(s) 122
PshBI ATTAAT 1 cut(s) 525
Psp5II RGGWCCY 1 cut(s) 122
Psp6I CCWGG 1 cut(s) 74
PspGI CCWGG 1 cut(s) 74
PspN4I GGNNCC 4 cut(s) 123, 124, 733, 892
PspPI GGNCC 2 cut(s) 122, 875
PspPPI RGGWCCY 1 cut(s) 122
PsrI GAACNNNNNNTAC 2 cut(s) 883, 915
PstNI CAGNNNCTG 1 cut(s) 442
PsuI RGATCY 1 cut(s) 949
RsaI GTAC 1 cut(s) 599
RsaNI GTAC 1 cut(s) 598
RseI CAYNNNNRTG 1 cut(s) 1121
SalI GTCGAC 1 cut(s) 502
SapI GCTCTTC 1 cut(s) 106
SaqAI TTAA 6 cut(s) 81, 320, 525, 582, 687, 758
SatI GCNGC 1 cut(s) 5
Sau3AI GATC 4 cut(s) 949, 1009, 1071, 1113
Sau96I GGNCC 2 cut(s) 122, 875
SchI GAGTC 1 cut(s) 301
ScrFI CCNGG 1 cut(s) 76
SduI GDGCHC 1 cut(s) 101
SfaNI GCATC 1 cut(s) 156
SinI GGWCC 2 cut(s) 122, 875
SmiMI CAYNNNNRTG 1 cut(s) 1121
SmlI CTYRAG 1 cut(s) 640
SmoI CTYRAG 1 cut(s) 640
SnaBI TACGTA 1 cut(s) 89
SphI GCATGC 1 cut(s) 214
Sse9I AATT 9 cut(s) 153, 271, 424, 526, 671, 818, 1014, 1019, 1053
SspMI CTAG 1 cut(s) 62
StyD4I CCNGG 1 cut(s) 74
StyI CCWWGG 1 cut(s) 605
TaaI ACNGT 3 cut(s) 222, 380, 1092
TaiI ACGT 2 cut(s) 91, 711
TaqI TCGA 4 cut(s) 150, 503, 909, 1023
TasI AATT 9 cut(s) 153, 271, 424, 526, 671, 818, 1014, 1019, 1053
TatI WGTACW 1 cut(s) 597
TfiI GAWTC 3 cut(s) 682, 770, 808
Tru1I TTAA 6 cut(s) 81, 320, 525, 582, 687, 758
Tru9I TTAA 6 cut(s) 81, 320, 525, 582, 687, 758
TscAI CASTG 5 cut(s) 227, 496, 733, 768, 966
TseFI GTSAC 1 cut(s) 239
TseI GCWGC 1 cut(s) 4
Tsp45I GTSAC 1 cut(s) 239
TspDTI ATGAA 6 cut(s) 527, 664, 684, 1073, 1101, 1139
TspRI CASTG 5 cut(s) 227, 496, 733, 768, 966
VpaK11BI GGWCC 2 cut(s) 122, 875
VspI ATTAAT 1 cut(s) 525
XapI RAATTY 4 cut(s) 153, 671, 1019, 1053
XceI RCATGY 1 cut(s) 214
XmiI GTMKAC 1 cut(s) 503
XmnI GAANNNNTTC 2 cut(s) 347, 976
XspI CTAG 1 cut(s) 62
Zsp2I ATGCAT 1 cut(s) 149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.