Rroxscaffold_1G00037680

Receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
54901125 .. 54904437
3313 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00037680.1

Sequence Viewer

Length: 1884 bp
ATGGTAATTCCACGAAAGCATCTTCAAAGAAACAACTTTTTGGTGGTTTGTCCCAACTCCCTTAGCGGAACAATACCATCTTGGGTATATTCTTTGCCATCTTTGGAATATTTGTGGCTCGACAACAACGAATTCACAGGTAATATCAGTGATTTCCAGTCTCTTTCCTTGTCATCTCTTGATTTAAGAAATAACAAGCTTCATGGCATGATTCCGAGTTCGATCTATGGACTCGTGAAACTTCACAGTCTTTATATATCCTCAAACAATTTGAGTGGCGTTGTGAAGTTTGAAAAGTTTCAAAATCTCCAAAATCTCACCGGTCTTGATCTTTCCTATAATCATCTAATGGTGAGTTTTCAGAACTTCAGTAATTATACATTGCCTAAACTTTCATATCTGCTCATGTCTGGTTGCAAAATAACTCAGTTTCCGTACTTCCTGAGAACCTCAACCCAATTAGAATACCTAGATCTTTCCCACAACCAGATTCAAGGCAATGTTCCAACATGGGTGTTGGACGTGGGGAGAAATTCATTATCATACTTTAATCTTTCTCACAATTTCTTGACGGGTACTATAGAACAATTTCTGTGGAAGAACATAGAAATTGTTGACCTTAGCTCCAATTTGTTGAAAGGAAAAGTTCCTATTCCATCACCTTCAACACGCGTCTTTTTGATGTCGAACAATCAATTGACTGGAGAATTGCCATCCACTATTTGCAACCTGACTTCTGTCCAAGTAATTGATTTATCTAACAATAGCTTGAGCGACAGGATTCCTCAATGCGTAGGGAATTTCAGTCAAGATCTCTCAGTTTTGGATTTGCATATGAATCAATTTCGTGGCAGGATCCCTTCAACATTCCCCAAGGGAAACATCTTGAGGAATCTTGACCTTAATGGAAATCAGTTGGAAGGGACTCTGCCACAGTCTCTAGTCAATTGCAGAAAGATGGAAGTTCTAGACTTGGGAGACAACAAGCTAAACGATACTTTCCCGAATTGGTTGGAGTCTCTTCCGGAGTTACAGGTTCTCATCTTGAGATCTAACAGACTGTATGTTCCAATTGGCAGTCCAGAAACAAGATTTTCCTTCCGAAAATTGCGAATCATTGACCTCTCCTTCAATCAGTTTGGTGGTCCTCTGCCAACAAAGTACTTTCAGAAATTGGTGGCTATGAAAAATGTGCAAGATGATGAACTGAAGTACATGGGAGAGTCCTATTACCGAGACACAGTCACAGTGGTAATGAAAGGCTTGTATCTTGAGCTGGTCAAAATACAAACCATGTTCACAACCATTGATTTTTCAAACAATGTTTTCAAAGGAGAGATTCCGGGGGTGATCGGCGAGCTCAAATCATGGAAGGGGCTTAACTTCTCTAGTAACAAGCTTAACGGTTCAATTCCATCCGCCTTCTGTAACTTGACTAATCTGGAATGGCTGGACATCTCCTCAAACATGCTTTCTGGTGAGATTCCAAGGCAACTAGCCGATTTGACGTCGCTGGCTAAGTTAAACCTATCAGGAAACCAGTTGGTTGGACCAATACCTCATGGCAAGCAGTTTGATACGTTTGAAAATGATTCATACAGTGGAAATTTGGGGTTGTGTGGATATCCACTGTCTAAAACATGTATCAACGACGAAGCACCTCAACCACCATGGTTTGATCAGCAAGATGGTGATATGAATGGATTTGATTGGAAAATAGTATGGATGGGTTATGGATGTGGAATGGTAATTGGATTGTCTGTGGGATATATTGTTCTTTCCATTGGGAAAGTTGATCGGCGGGTAAGGGTCATGGGAAGAGAAATAAGAAGCAGAATGGTGAAAAAGGCCAAGAAGGCTAGTGTTGGAACTAGAAAGTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

627

Amino Acids

70.8

Weight (kDa)

8.74

Isoelectric Point (pI)

29.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 14 - 67 1e-05 Leucine rich repeat
LRR_8 PF13855 80 - 141 8.9e-06 Leucine rich repeat
LRR_8 PF13855 296 - 354 2.1e-09 Leucine rich repeat
LRR_8 PF13855 448 - 491 1e-05 Leucine rich repeat
LRR_8 PF13855 460 - 515 1.9e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1511
AccII CGCG 1 cut(s) 672
AccIII TCCGGA 1 cut(s) 1024
AciI CCGC 3 cut(s) 66, 1419, 1801
AclWI GGATC 2 cut(s) 850, 863
AcsI RAATTY 4 cut(s) 131, 532, 799, 1606
AcuI CTGAAG 2 cut(s) 352, 1229
AcyI GRCGYC 1 cut(s) 1508
AfaI GTAC 4 cut(s) 437, 577, 1163, 1214
AflIII ACRYGT 2 cut(s) 670, 1640
AgeI ACCGGT 1 cut(s) 320
AjiI CACGTC 1 cut(s) 523
AloI GAACNNNNNNTCC 2 cut(s) 1758, 1790
AluBI AGCT 7 cut(s) 199, 624, 768, 988, 1276, 1360, 1399
AluI AGCT 7 cut(s) 199, 624, 768, 988, 1276, 1360, 1399
Alw21I GWGCWC 1 cut(s) 1362
Alw26I GTCTC 5 cut(s) 165, 942, 972, 1023, 1230
AlwI GGATC 2 cut(s) 850, 863
Aor13HI TCCGGA 1 cut(s) 1024
AoxI GGCC 1 cut(s) 1848
ApoI RAATTY 4 cut(s) 131, 532, 799, 1606
AsiGI ACCGGT 1 cut(s) 320
Asp700I GAANNNNTTC 2 cut(s) 297, 588
AspS9I GGNCC 2 cut(s) 1145, 1550
AsuC2I CCSGG 1 cut(s) 1344
AsuHPI GGTGA 7 cut(s) 310, 364, 651, 1360, 1490, 1703, 1852
AvaII GGWCC 2 cut(s) 1145, 1550
BamHI GGATCC 1 cut(s) 855
BanII GRGCYC 1 cut(s) 1362
BauI CACGAG 1 cut(s) 233
Bbv12I GWGCWC 1 cut(s) 1362
BccI CCATC 8 cut(s) 85, 106, 664, 721, 952, 1423, 1682, 1720
BclI TGATCA 1 cut(s) 1678
BcnI CCSGG 1 cut(s) 1344
BcoDI GTCTC 5 cut(s) 165, 942, 972, 1023, 1230
BfaI CTAG 7 cut(s) 470, 941, 968, 1389, 1496, 1860, 1872
BfmI CTRYAG 1 cut(s) 579
BglI GCCNNNNNGGC 1 cut(s) 1856
BglII AGATCT 3 cut(s) 472, 811, 1049
BmcAI AGTACT 1 cut(s) 1163
Bme1390I CCNGG 1 cut(s) 1344
Bme18I GGWCC 2 cut(s) 1145, 1550
BmgBI CACGTC 1 cut(s) 523
BmgT120I GGNCC 2 cut(s) 1145, 1550
BmiI GGNNCC 1 cut(s) 857
BmrFI CCNGG 1 cut(s) 1344
BmsI GCATC 1 cut(s) 28
BoxI GACNNNNGTC 1 cut(s) 737
BpmI CTGGAG 1 cut(s) 723
Bpu10I CCTNAGC 2 cut(s) 62, 620
BpuEI CTTGAG 4 cut(s) 790, 907, 1066, 1292
BpuMI CCSGG 1 cut(s) 1344
BsaHI GRCGYC 1 cut(s) 1508
BsaJI CCNNGG 4 cut(s) 873, 1343, 1487, 1670
BsaWI WCCGGW 2 cut(s) 320, 1024
BsaXI ACNNNNNCTCC 2 cut(s) 608, 638
Bse118I RCCGGY 1 cut(s) 320
Bse1I ACTGG 3 cut(s) 157, 706, 1540
Bse3DI GCAATG 2 cut(s) 380, 505
BseAI TCCGGA 1 cut(s) 1024
BseDI CCNNGG 4 cut(s) 873, 1343, 1487, 1670
BseGI GGATG 4 cut(s) 713, 1415, 1731, 1742
BseMI GCAATG 2 cut(s) 380, 505
BseMII CTCAG 3 cut(s) 434, 440, 831
BseNI ACTGG 3 cut(s) 157, 706, 1540
BseRI GAGGAG 1 cut(s) 1450
Bsh1236I CGCG 1 cut(s) 672
BshFI GGCC 1 cut(s) 1850
BshTI ACCGGT 1 cut(s) 320
BsiHKAI GWGCWC 1 cut(s) 1362
BsiSI CCGG 3 cut(s) 321, 1025, 1343
BslFI GGGAC 2 cut(s) 36, 937
BsmAI GTCTC 5 cut(s) 165, 942, 972, 1023, 1230
BsmFI GGGAC 2 cut(s) 36, 937
BsnI GGCC 1 cut(s) 1850
Bsp1286I GDGCHC 1 cut(s) 1362
Bsp13I TCCGGA 1 cut(s) 1024
Bsp143I GATC 9 cut(s) 222, 328, 472, 811, 855, 1049, 1350, 1678, 1795
Bsp19I CCATGG 1 cut(s) 1670
BspACI CCGC 3 cut(s) 66, 1419, 1801
BspANI GGCC 1 cut(s) 1850
BspCNI CTCAG 3 cut(s) 435, 439, 830
BspEI TCCGGA 1 cut(s) 1024
BspFNI CGCG 1 cut(s) 672
BspLI GGNNCC 1 cut(s) 857
BspPI GGATC 2 cut(s) 850, 863
BsrDI GCAATG 2 cut(s) 380, 505
BsrFI RCCGGY 1 cut(s) 320
BsrI ACTGG 3 cut(s) 157, 706, 1540
BssAI RCCGGY 1 cut(s) 320
BssECI CCNNGG 4 cut(s) 873, 1343, 1487, 1670
BssMI GATC 9 cut(s) 222, 328, 472, 811, 855, 1049, 1350, 1678, 1795
BssNI GRCGYC 1 cut(s) 1508
BssSI CACGAG 1 cut(s) 233
BssT1I CCWWGG 3 cut(s) 873, 1487, 1670
Bst2BI CACGAG 1 cut(s) 233
Bst4CI ACNGT 8 cut(s) 248, 936, 1062, 1243, 1249, 1406, 1601, 1632
Bst6I CTCTTC 2 cut(s) 1026, 1813
BstACI GRCGYC 1 cut(s) 1508
BstC8I GCNNGC 3 cut(s) 1358, 1515, 1568
BstDEI CTNAG 6 cut(s) 62, 426, 443, 620, 817, 1518
BstDSI CCRYGG 1 cut(s) 1670
BstF5I GGATG 4 cut(s) 713, 1415, 1731, 1742
BstFNI CGCG 1 cut(s) 672
BstKTI GATC 9 cut(s) 225, 331, 475, 814, 858, 1052, 1353, 1681, 1798
BstMAI GTCTC 5 cut(s) 165, 942, 972, 1023, 1230
BstMBI GATC 9 cut(s) 222, 328, 472, 811, 855, 1049, 1350, 1678, 1795
BstMWI GCNNNNNNNGC 1 cut(s) 1856
BstNSI RCATGY 2 cut(s) 1471, 1644
BstPAI GACNNNNGTC 1 cut(s) 737
BstSCI CCNGG 1 cut(s) 1342
BstSFI CTRYAG 1 cut(s) 579
BstUI CGCG 1 cut(s) 672
BstX2I RGATCY 4 cut(s) 472, 811, 855, 1049
BstXI CCANNNNNNTGG 1 cut(s) 1547
BstYI RGATCY 4 cut(s) 472, 811, 855, 1049
BsuRI GGCC 1 cut(s) 1850
BtgI CCRYGG 1 cut(s) 1670
BtrI CACGTC 1 cut(s) 523
BtsCI GGATG 4 cut(s) 713, 1415, 1731, 1742
BtsIMutI CAGTG 4 cut(s) 154, 1254, 1606, 1628
Cac8I GCNNGC 3 cut(s) 1358, 1515, 1568
Cfr10I RCCGGY 1 cut(s) 320
Cfr13I GGNCC 2 cut(s) 1145, 1550
CseI GACGC 1 cut(s) 661
Csp6I GTAC 4 cut(s) 436, 576, 1162, 1213
CspAI ACCGGT 1 cut(s) 320
CspCI CAANNNNNGTGG 4 cut(s) 256, 291, 575, 610
CviQI GTAC 4 cut(s) 436, 576, 1162, 1213
DdeI CTNAG 6 cut(s) 62, 426, 443, 620, 817, 1518
DpnI GATC 9 cut(s) 224, 330, 474, 813, 857, 1051, 1352, 1680, 1797
DpnII GATC 9 cut(s) 222, 328, 472, 811, 855, 1049, 1350, 1678, 1795
Eam1104I CTCTTC 2 cut(s) 1026, 1813
EarI CTCTTC 2 cut(s) 1026, 1813
EciI GGCGGA 1 cut(s) 1408
Ecl136II GAGCTC 1 cut(s) 1360
Eco130I CCWWGG 3 cut(s) 873, 1487, 1670
Eco24I GRGCYC 1 cut(s) 1362
Eco32I GATATC 1 cut(s) 1625
Eco47I GGWCC 2 cut(s) 1145, 1550
Eco53kI GAGCTC 1 cut(s) 1360
Eco57I CTGAAG 2 cut(s) 352, 1229
EcoICRI GAGCTC 1 cut(s) 1360
EcoRI GAATTC 1 cut(s) 131
EcoRV GATATC 1 cut(s) 1625
EcoT14I CCWWGG 3 cut(s) 873, 1487, 1670
EcoT38I GRGCYC 1 cut(s) 1362
ErhI CCWWGG 3 cut(s) 873, 1487, 1670
FaqI GGGAC 2 cut(s) 36, 937
FauI CCCGC 1 cut(s) 1794
FauNDI CATATG 1 cut(s) 834
FbaI TGATCA 1 cut(s) 1678
FokI GGATG 4 cut(s) 700, 1402, 1738, 1749
FriOI GRGCYC 1 cut(s) 1362
FspBI CTAG 7 cut(s) 470, 941, 968, 1389, 1496, 1860, 1872
GsuI CTGGAG 1 cut(s) 723
HaeIII GGCC 1 cut(s) 1850
HapII CCGG 3 cut(s) 321, 1025, 1343
HgaI GACGC 1 cut(s) 661
Hin1I GRCGYC 1 cut(s) 1508
HincII GTYRAC 1 cut(s) 616
HindII GTYRAC 1 cut(s) 616
HindIII AAGCTT 2 cut(s) 197, 1397
HpaII CCGG 3 cut(s) 321, 1025, 1343
HphI GGTGA 7 cut(s) 310, 364, 651, 1360, 1490, 1703, 1852
Hpy166II GTNNAC 2 cut(s) 616, 1299
Hpy188I TCNGA 4 cut(s) 216, 363, 1103, 1170
Hpy8I GTNNAC 2 cut(s) 616, 1299
Hpy99I CGWCG 2 cut(s) 1513, 1655
HpyAV CCTTC 8 cut(s) 672, 870, 914, 1108, 1138, 1366, 1432, 1849
HpyCH4III ACNGT 8 cut(s) 248, 936, 1062, 1243, 1249, 1406, 1601, 1632
HpyCH4IV ACGT 3 cut(s) 522, 1508, 1580
HpyCH4V TGCA 5 cut(s) 417, 726, 832, 951, 1195
HpyF10VI GCNNNNNNNGC 1 cut(s) 1856
HpyF3I CTNAG 6 cut(s) 62, 426, 443, 620, 817, 1518
HpySE526I ACGT 3 cut(s) 522, 1508, 1580
Hsp92I GRCGYC 1 cut(s) 1508
Kpn2I TCCGGA 1 cut(s) 1024
Ksp22I TGATCA 1 cut(s) 1678
Kzo9I GATC 9 cut(s) 222, 328, 472, 811, 855, 1049, 1350, 1678, 1795
LmnI GCTCC 1 cut(s) 629
LweI GCATC 1 cut(s) 28
MaeI CTAG 7 cut(s) 470, 941, 968, 1389, 1496, 1860, 1872
MaeII ACGT 3 cut(s) 522, 1508, 1580
MaeIII GTNAC 4 cut(s) 1029, 1243, 1391, 1427
MalI GATC 9 cut(s) 224, 330, 474, 813, 857, 1051, 1352, 1680, 1797
MboI GATC 9 cut(s) 222, 328, 472, 811, 855, 1049, 1350, 1678, 1795
MboII GAAGA 4 cut(s) 14, 610, 1013, 1830
MfeI CAATTG 3 cut(s) 695, 946, 1071
MflI RGATCY 4 cut(s) 472, 811, 855, 1049
MhlI GDGCHC 1 cut(s) 1362
MluI ACGCGT 1 cut(s) 670
MlyI GAGTC 4 cut(s) 225, 919, 1025, 1232
MmeI TCCRAC 6 cut(s) 498, 530, 897, 993, 1528, 1846
MnlI CCTC 9 cut(s) 271, 460, 795, 882, 1133, 1158, 1471, 1569, 1671
MroI TCCGGA 1 cut(s) 1024
MroXI GAANNNNTTC 2 cut(s) 297, 588
MseI TTAA 6 cut(s) 185, 549, 903, 1380, 1401, 1523
MspI CCGG 3 cut(s) 321, 1025, 1343
MspR9I CCNGG 1 cut(s) 1344
MunI CAATTG 3 cut(s) 695, 946, 1071
MvnI CGCG 1 cut(s) 672
MwoI GCNNNNNNNGC 1 cut(s) 1856
NciI CCSGG 1 cut(s) 1344
NcoI CCATGG 1 cut(s) 1670
NdeI CATATG 1 cut(s) 834
NdeII GATC 9 cut(s) 222, 328, 472, 811, 855, 1049, 1350, 1678, 1795
NlaIV GGNNCC 1 cut(s) 857
NmuCI GTSAC 1 cut(s) 1243
NspI RCATGY 2 cut(s) 1471, 1644
PciI ACATGT 1 cut(s) 1640
PcsI WCGNNNNNNNCGW 1 cut(s) 126
PdmI GAANNNNTTC 2 cut(s) 297, 588
PfeI GAWTC 9 cut(s) 211, 490, 781, 838, 892, 1113, 1339, 1483, 1592
PflFI GACNNNGTC 1 cut(s) 1241
PinAI ACCGGT 1 cut(s) 320
PleI GAGTC 4 cut(s) 225, 919, 1024, 1231
PpsI GAGTC 4 cut(s) 225, 919, 1024, 1231
PscI ACATGT 1 cut(s) 1640
PshAI GACNNNNGTC 1 cut(s) 737
Psp124BI GAGCTC 1 cut(s) 1362
PspN4I GGNNCC 1 cut(s) 857
PspPI GGNCC 2 cut(s) 1145, 1550
PsuI RGATCY 4 cut(s) 472, 811, 855, 1049
PsyI GACNNNGTC 1 cut(s) 1241
RsaI GTAC 4 cut(s) 437, 577, 1163, 1214
RsaNI GTAC 4 cut(s) 436, 576, 1162, 1213
SacI GAGCTC 1 cut(s) 1362
SaqAI TTAA 6 cut(s) 185, 549, 903, 1380, 1401, 1523
Sau3AI GATC 9 cut(s) 222, 328, 472, 811, 855, 1049, 1350, 1678, 1795
Sau96I GGNCC 2 cut(s) 1145, 1550
ScaI AGTACT 1 cut(s) 1163
SchI GAGTC 4 cut(s) 225, 919, 1025, 1232
ScrFI CCNGG 1 cut(s) 1344
SduI GDGCHC 1 cut(s) 1362
SfaNI GCATC 1 cut(s) 28
SfcI CTRYAG 1 cut(s) 579
SinI GGWCC 2 cut(s) 1145, 1550
SmlI CTYRAG 4 cut(s) 769, 886, 1045, 1271
SmoI CTYRAG 4 cut(s) 769, 886, 1045, 1271
SsiI CCGC 3 cut(s) 66, 1419, 1801
SspI AATATT 1 cut(s) 110
SspMI CTAG 7 cut(s) 470, 941, 968, 1389, 1496, 1860, 1872
SstI GAGCTC 1 cut(s) 1362
StyD4I CCNGG 1 cut(s) 1342
StyI CCWWGG 3 cut(s) 873, 1487, 1670
TaaI ACNGT 8 cut(s) 248, 936, 1062, 1243, 1249, 1406, 1601, 1632
TaiI ACGT 3 cut(s) 525, 1511, 1583
TaqI TCGA 3 cut(s) 120, 221, 686
TatI WGTACW 2 cut(s) 1161, 1212
TfiI GAWTC 9 cut(s) 211, 490, 781, 838, 892, 1113, 1339, 1483, 1592
Tru1I TTAA 6 cut(s) 185, 549, 903, 1380, 1401, 1523
Tru9I TTAA 6 cut(s) 185, 549, 903, 1380, 1401, 1523
TscAI CASTG 4 cut(s) 154, 1254, 1606, 1635
TseFI GTSAC 1 cut(s) 1243
Tsp45I GTSAC 1 cut(s) 1243
TspDTI ATGAA 9 cut(s) 191, 384, 525, 851, 1199, 1218, 1271, 1584, 1712
TspGWI ACGGA 1 cut(s) 423
TspRI CASTG 4 cut(s) 154, 1254, 1606, 1635
Tth111I GACNNNGTC 1 cut(s) 1241
VpaK11BI GGWCC 2 cut(s) 1145, 1550
XapI RAATTY 4 cut(s) 131, 532, 799, 1606
XbaI TCTAGA 1 cut(s) 967
XceI RCATGY 2 cut(s) 1471, 1644
XmnI GAANNNNTTC 2 cut(s) 297, 588
XspI CTAG 7 cut(s) 470, 941, 968, 1389, 1496, 1860, 1872
ZraI GACGTC 1 cut(s) 1509
ZrmI AGTACT 1 cut(s) 1163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.