Rw1G017730

Receptor-like protein 12

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
39269528 .. 39274188
4661 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G017730.1

Sequence Viewer

Length: 2799 bp
ATGACTTCATTTTCGAATCAGCAACCATCTACTTGCCATGGTGAGGAGAGCACCGCCTTGTTGCTATTTAAGCAAAGCTTTATTATCGACCCATCTGCTTCTAGTTATGATGGTTCCTACCCAAAGGTCTCATCATGGAAGGTAGCTGAAGGAGATCAAAATAGCAACTGCTGCTCATGGGACGGGGTACAGTGTGATGAGGAAACTGGTCGTGTTATTGGTCTTGATCTCAGTAGCAGTTGTCTCTATGGCTCCATCAACTCCAACAGCAGCCTCTTTCGCCTTGTTCATCTCCGGAGACTGAATCTTGCTGACAACAACTTCAATTACTCTCAAATTCCTACAACAATTAGAAATCTTTCGAGGCTCAGGTATCTCAACCTTTCCTTCTCTGTGTTTTCTGGCCAAGTCCCATCTGAAATTTCACAATTGTCCAAATTGTCATCCCTTGATCTGTCTAGCACTATATCTTCTGAGGCACTGTTGAAGTTTAAAGTACCCAATCTGGCAAGTCTAGTTCAAAACTTAACTTGTCTTGAAAAGCTTCATCTCAGTGACATTAACATATCTTCCACAATTCCTGATTCATTGGTCAATTTGTCATTTTTGTCATCCCTCGCTCTGAGGAATTGTGATTTGTATGGCGAATTCCCAATAAGAATTTTCAAGTTACAATACTTGACATTTCTTAATGTGGGGTCAAACCAAGAGCTTTCTGGTTATTTGCCTGACTTTAATGGTAGTAGTCCTCTCACGTCACTGTTACTATATGAAACTAATTTTTCCAGAAGCCTTCCTTCATCGATCGGAAATCTTGACGAATTGACACGGTTGGATTTGTATGAATGCAAATTCTCAGGTTCAATTCCTGCTTCACTAGCAAACCTTACCCAACTCAGTTATTTGTCACTTGGAATGAATGATTTTGTTGGCGGTCCTTTGTCTTGGCTTGGTAAGCAAACAAAACTTACCCTTCTTGACCTTGACGGCAGCAATCTGAGTGGTTGCATCCCGTCTTCTCTTGGCAACCTCACACAGCTCACTTATCTTTCTCTTAAGCATAATGAACTTAGTGGTCCAATCCCATCTTTGTTAGGTAACCTTAGCAGACTAACTGACTTACTTCTTGAAGAAAACAGTTTAAATAGTTCAATTCCTGAATCATTGTTCATTCTAGTGGACCTCGACCAGCTTACTCTAGGCGGAAATGACCTTCAGGGTAAATTGGACATTTGTAAGATACAAAGTTCCATAACAATGCTCCAACTAGGTGGGAACAAACTAGAAGTGTCGCAATGTAAAGTTACGAATACAACCCTGCTTCCAAAGTTTAGGTTTCTAGGATTGTCTGACTGCAACATGGAAGAGTTTCCAGATTTCCTAAGACATCAACAAAGCTTGACGTGGTTGGACCTTCTCGCAAATAAATTGCATGGCCAAATACCCAAATGGATGTGGAATACAAGCACACAAAGTTTGAAGTTCCTAGACATTAGGGAAAACTTCCTTTTGGGGTTTGGCCAACCAAATGTCGTCCTTCCTTGGGTTAACCTACAAGTTTTATTTGGTCGGGATAATTTGCTGGATGGATCACCACCCATACCTCCACAGAACATCATCTATTATGCACTCGAGGACAACAAACTTACCGGGGAACTTTCACCATTGATGTGCAATCTAAGTACTCTTCAGTACTTTGATTTGTCAAATAACATGTTGAGTGGCACCATTCCGCCGTGTCTTGGTAACTTCAGTGATGATCTACAAGTTTTAAATCTTCGAAAAAACTCTTTTCGCGGCATTCTTCCTCAAACATACAGCAACACAAGTAGCATGGAGATGCTTGATGTCAGTTATAACCAATTGCATGGGAAAATACCAAGGTCACTGGCGAATTGTGTGATGCTTGAGTCTCTTGTTCTTTCAGTGAATAAATTCAGTGACGTCTTCCCTTTTTGGTTGGGGAGTCTCCAGGAATTAAAACTCTTGGCGATGCACCACAATGAGTTCTATGGTGTGATTGAGAATACCAAAGAAAATCTTCATTTTTCTGAGCTGCGCATTCTTGACCTGTCTTGCAATAATTTCACAGGTGAGTTTCCCTCTGAATACATCTTTTCTAGTAATGCCATGAGAGGTATAGTTCTGAGCCAACCCACATATATGGAGGCAACCTCAGATCTTAATATCCCCGGTGCACCTACATTTGCGTATATTTTCACAGTCACAATCTCAAACAAAGGTGTCGAGAGATACTACCCGAGGATTCAAGATGACCTTGGGGTGATTGATATCTCAAGCAATAATTTCCAAGGGAAGATTCCAGAATTCATTGGGAACTTGAAAGGGCTTCGCTTTCTCAACATTTCCAATAACTTCTTCAACGGCAGCATCCCATCATTCTTGGAAAATTTGACATTGCTTGAAGCGTTGGACCTTTCACAGAACCAGCTCTCAGGAGAGATTCCTCAGCAACTAGTTCAGCTTACGTCTCTTGCGAATTTTAATGTATCCTACAACAATCTCACAGGTTCTATACCGCAAGGGGGCCAATTTCATACATTCGAGAACACTTCATACGAGGGAAACCCAGAATTGTGTGGAGACCCTTTGACGAAGAGATGTGGGAACTCTATTGCCCCAGCTCAACTGCCACCTTCAAGCAGCATCGAAGAAAATGTTTCAGGCTCTGGTTTTGAACTTGACTGGAAATTTGTGTTCGCTGGATTGGGAAGTGGGTTCCTGGTGGGAGTGGTACTTGCAGATGTGGCGATTACACGGAGGCGTGAGTTAATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

932

Amino Acids

103.18

Weight (kDa)

4.85

Isoelectric Point (pI)

39.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 15 - 66 7.7e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 75 - 187 7.5e-10 Leucine-rich repeat region
LRR_8 PF13855 588 - 645 9.1e-08 Leucine rich repeat
LRR_14 PF23598 762 - 838 1.3e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1857
AatII GACGTC 1 cut(s) 1947
Acc16I TGCGCA 1 cut(s) 2060
AccB1I GGYRCC 1 cut(s) 1724
AccII CGCG 1 cut(s) 1797
AccIII TCCGGA 1 cut(s) 294
AciI CCGC 6 cut(s) 54, 933, 1203, 1733, 1797, 2540
AclWI GGATC 1 cut(s) 1597
AcoI YGGCCR 3 cut(s) 403, 1435, 1519
AcuI CTGAAG 4 cut(s) 168, 1199, 1673, 1735
AcyI GRCGYC 1 cut(s) 1944
AfaI GTAC 5 cut(s) 189, 498, 1684, 1694, 2757
AfiI CCNNNNNNNGG 4 cut(s) 43, 1543, 1742, 2546
AflII CTTAAG 1 cut(s) 1055
AflIII ACRYGT 1 cut(s) 1713
AhlI ACTAGT 1 cut(s) 2476
AjiI CACGTC 2 cut(s) 756, 1404
AjnI CCWGG 2 cut(s) 1971, 2742
AjuI GAANNNNNNNTTGG 4 cut(s) 2304, 2336, 2363, 2395
Alw21I GWGCWC 2 cut(s) 53, 2200
Alw26I GTCTC 7 cut(s) 133, 248, 292, 1917, 1973, 2496, 2598
Alw44I GTGCAC 1 cut(s) 2196
AlwI GGATC 1 cut(s) 1597
AlwNI CAGNNNCTG 1 cut(s) 2690
Ama87I CYCGRG 2 cut(s) 1631, 2260
Aor13HI TCCGGA 1 cut(s) 294
AoxI GGCC 4 cut(s) 403, 1435, 1519, 2548
ApaLI GTGCAC 1 cut(s) 2196
ApeKI GCWGC 6 cut(s) 171, 270, 990, 2056, 2388, 2664
ArsI GACNNNNNNTTYG 3 cut(s) 27, 2696, 2728
Asp700I GAANNNNTTC 5 cut(s) 358, 543, 1368, 1934, 2040
AspLEI GCGC 1 cut(s) 2061
AspS9I GGNCC 6 cut(s) 935, 1076, 1180, 1411, 2434, 2548
AsuC2I CCSGG 2 cut(s) 1651, 2193
AsuHPI GGTGA 5 cut(s) 53, 1584, 1653, 2105, 2296
AsuII TTCGAA 2 cut(s) 14, 1780
AvaI CYCGRG 2 cut(s) 1631, 2260
AvaII GGWCC 5 cut(s) 935, 1076, 1180, 1411, 2434
BaeGI GKGCMC 1 cut(s) 2200
BalI TGGCCA 3 cut(s) 405, 1437, 1521
BanI GGYRCC 1 cut(s) 1724
BbsI GAAGAC 2 cut(s) 1008, 1939
Bbv12I GWGCWC 2 cut(s) 53, 2200
BbvCI CCTCAGC 1 cut(s) 2469
BbvI GCAGC 6 cut(s) 158, 282, 1002, 2043, 2400, 2676
BccI CCATC 8 cut(s) 34, 100, 104, 263, 421, 1093, 1580, 2404
BceAI ACGGC 3 cut(s) 1003, 1720, 2401
BcgI CGANNNNNNTGC 2 cut(s) 77, 111
BciT130I CCWGG 2 cut(s) 1973, 2744
BciVI GTATCC 1 cut(s) 2521
BcnI CCSGG 2 cut(s) 1651, 2193
BcoDI GTCTC 7 cut(s) 133, 248, 292, 1917, 1973, 2496, 2598
BcuI ACTAGT 1 cut(s) 2476
BfrI CTTAAG 1 cut(s) 1055
BfuI GTATCC 1 cut(s) 2521
BglII AGATCT 1 cut(s) 2179
BisI GCNGC 7 cut(s) 172, 271, 991, 1798, 2057, 2389, 2665
BlsI GCNGC 7 cut(s) 173, 272, 992, 1799, 2058, 2390, 2666
BmcAI AGTACT 2 cut(s) 1684, 1694
Bme1390I CCNGG 4 cut(s) 1651, 1973, 2193, 2744
Bme18I GGWCC 5 cut(s) 935, 1076, 1180, 1411, 2434
BmeT110I CYCGRG 2 cut(s) 1631, 2260
BmgBI CACGTC 2 cut(s) 756, 1404
BmgT120I GGNCC 6 cut(s) 935, 1076, 1180, 1411, 2434, 2548
BmiI GGNNCC 5 cut(s) 115, 253, 1726, 2549, 2741
BmrFI CCNGG 4 cut(s) 1651, 1973, 2193, 2744
BmsI GCATC 6 cut(s) 1017, 1830, 1893, 1983, 2400, 2676
BpiI GAAGAC 2 cut(s) 1008, 1939
BplI GAGNNNNNCTC 4 cut(s) 2087, 2119, 2159, 2191
BpmI CTGGAG 1 cut(s) 1955
Bpu10I CCTNAGC 3 cut(s) 368, 1103, 2469
Bpu14I TTCGAA 2 cut(s) 14, 1780
BpuEI CTTGAG 2 cut(s) 1928, 2281
BpuMI CCSGG 2 cut(s) 1651, 2193
Bsa29I ATCGAT 1 cut(s) 803
BsaBI GATNNNNATC 1 cut(s) 2291
BsaHI GRCGYC 1 cut(s) 1944
BsaI GGTCTC 2 cut(s) 133, 2598
BsaJI CCNNGG 8 cut(s) 37, 1541, 1650, 1880, 2191, 2261, 2278, 2311
BsaWI WCCGGW 1 cut(s) 294
Bsc4I CCNNNNNNNGG 4 cut(s) 43, 1543, 1742, 2546
Bse1I ACTGG 3 cut(s) 211, 1893, 2711
Bse3DI GCAATG 2 cut(s) 1301, 2417
Bse8I GATNNNNATC 1 cut(s) 2291
BseAI TCCGGA 1 cut(s) 294
BseBI CCWGG 2 cut(s) 1973, 2744
BseCI ATCGAT 1 cut(s) 803
BseDI CCNNGG 8 cut(s) 37, 1541, 1650, 1880, 2191, 2261, 2278, 2311
BseGI GGATG 6 cut(s) 443, 611, 1008, 1458, 1591, 2391
BseJI GATNNNNATC 1 cut(s) 2291
BseLI CCNNNNNNNGG 4 cut(s) 43, 1543, 1742, 2546
BseMI GCAATG 2 cut(s) 1301, 2417
BseNI ACTGG 3 cut(s) 211, 1893, 2711
BseRI GAGGAG 1 cut(s) 59
BseSI GKGCMC 1 cut(s) 2200
BseXI GCAGC 6 cut(s) 158, 282, 1002, 2043, 2400, 2676
BseYI CCCAGC 1 cut(s) 2641
Bsh1236I CGCG 1 cut(s) 1797
Bsh1285I CGRYCG 1 cut(s) 807
BshFI GGCC 4 cut(s) 405, 1437, 1521, 2550
BshNI GGYRCC 1 cut(s) 1724
BshVI ATCGAT 1 cut(s) 803
BsiEI CGRYCG 1 cut(s) 807
BsiHKAI GWGCWC 2 cut(s) 53, 2200
BsiHKCI CYCGRG 2 cut(s) 1631, 2260
BsiSI CCGG 3 cut(s) 295, 1650, 2193
BslFI GGGAC 2 cut(s) 194, 395
BslI CCNNNNNNNGG 4 cut(s) 43, 1543, 1742, 2546
BsmAI GTCTC 7 cut(s) 133, 248, 292, 1917, 1973, 2496, 2598
BsmBI CGTCTC 1 cut(s) 2496
BsmFI GGGAC 2 cut(s) 194, 395
BsmI GAATGC 3 cut(s) 851, 1800, 2061
BsnI GGCC 4 cut(s) 405, 1437, 1521, 2550
Bso31I GGTCTC 2 cut(s) 133, 2598
BsoBI CYCGRG 2 cut(s) 1631, 2260
Bsp119I TTCGAA 2 cut(s) 14, 1780
Bsp1286I GDGCHC 2 cut(s) 53, 2200
Bsp13I TCCGGA 1 cut(s) 294
Bsp143I GATC 7 cut(s) 154, 226, 451, 804, 1589, 1759, 2179
Bsp19I CCATGG 1 cut(s) 37
BspACI CCGC 6 cut(s) 54, 933, 1203, 1733, 1797, 2540
BspANI GGCC 4 cut(s) 405, 1437, 1521, 2550
BspDI ATCGAT 1 cut(s) 803
BspEI TCCGGA 1 cut(s) 294
BspFNI CGCG 1 cut(s) 1797
BspLI GGNNCC 5 cut(s) 115, 253, 1726, 2549, 2741
BspPI GGATC 1 cut(s) 1597
BspT104I TTCGAA 2 cut(s) 14, 1780
BspT107I GGYRCC 1 cut(s) 1724
BspTI CTTAAG 1 cut(s) 1055
BspTNI GGTCTC 2 cut(s) 133, 2598
BsrDI GCAATG 2 cut(s) 1301, 2417
BsrI ACTGG 3 cut(s) 211, 1893, 2711
BssECI CCNNGG 8 cut(s) 37, 1541, 1650, 1880, 2191, 2261, 2278, 2311
BssMI GATC 7 cut(s) 154, 226, 451, 804, 1589, 1759, 2179
BssNI GRCGYC 1 cut(s) 1944
BssT1I CCWWGG 5 cut(s) 37, 1541, 1880, 2278, 2311
Bst2UI CCWGG 2 cut(s) 1973, 2744
Bst4CI ACNGT 6 cut(s) 192, 483, 762, 831, 1139, 2224
Bst6I CTCTTC 3 cut(s) 1359, 1692, 2612
BstACI GRCGYC 1 cut(s) 1944
BstAFI CTTAAG 1 cut(s) 1055
BstAPI GCANNNNNTGC 1 cut(s) 171
BstBI TTCGAA 2 cut(s) 14, 1780
BstDSI CCRYGG 1 cut(s) 37
BstEII GGTNACC 1 cut(s) 1097
BstF5I GGATG 6 cut(s) 443, 611, 1008, 1458, 1591, 2391
BstFNI CGCG 1 cut(s) 1797
BstHHI GCGC 1 cut(s) 2061
BstKTI GATC 7 cut(s) 157, 229, 454, 807, 1592, 1762, 2182
BstMAI GTCTC 7 cut(s) 133, 248, 292, 1917, 1973, 2496, 2598
BstMBI GATC 7 cut(s) 154, 226, 451, 804, 1589, 1759, 2179
BstMCI CGRYCG 1 cut(s) 807
BstMWI GCNNNNNNNGC 6 cut(s) 70, 171, 279, 878, 955, 2768
BstNI CCWGG 2 cut(s) 1973, 2744
BstNSI RCATGY 1 cut(s) 1717
BstPI GGTNACC 1 cut(s) 1097
BstSCI CCNGG 4 cut(s) 1649, 1971, 2191, 2742
BstSLI GKGCMC 1 cut(s) 2200
BstUI CGCG 1 cut(s) 1797
BstV1I GCAGC 6 cut(s) 158, 282, 1002, 2043, 2400, 2676
BstV2I GAAGAC 2 cut(s) 1008, 1939
BstX2I RGATCY 1 cut(s) 2179
BstXI CCANNNNNNTGG 3 cut(s) 1271, 1868, 2164
BstYI RGATCY 1 cut(s) 2179
Bsu15I ATCGAT 1 cut(s) 803
BsuI GTATCC 1 cut(s) 2521
BsuRI GGCC 4 cut(s) 405, 1437, 1521, 2550
BsuTUI ATCGAT 1 cut(s) 803
BtgI CCRYGG 1 cut(s) 37
BtgZI GCGATG 1 cut(s) 2006
BtrI CACGTC 2 cut(s) 756, 1404
BtsCI GGATG 6 cut(s) 443, 611, 1008, 1458, 1591, 2391
BtsIMutI CAGTG 8 cut(s) 197, 479, 559, 758, 1759, 1886, 1932, 1945
CaiI CAGNNNCTG 1 cut(s) 2690
CfoI GCGC 1 cut(s) 2061
Cfr13I GGNCC 6 cut(s) 935, 1076, 1180, 1411, 2434, 2548
ClaI ATCGAT 1 cut(s) 803
Csp6I GTAC 5 cut(s) 188, 497, 1683, 1693, 2756
CspCI CAANNNNNGTGG 2 cut(s) 982, 1017
CviAII CATG 9 cut(s) 38, 135, 177, 1360, 1433, 1714, 1834, 1868, 2131
CviQI GTAC 5 cut(s) 188, 497, 1683, 1693, 2756
DpnI GATC 7 cut(s) 156, 228, 453, 806, 1591, 1761, 2181
DpnII GATC 7 cut(s) 154, 226, 451, 804, 1589, 1759, 2179
DraI TTTAAA 3 cut(s) 493, 1143, 1773
EaeI YGGCCR 3 cut(s) 403, 1435, 1519
Eam1104I CTCTTC 3 cut(s) 1359, 1692, 2612
EarI CTCTTC 3 cut(s) 1359, 1692, 2612
EciI GGCGGA 2 cut(s) 1218, 1722
Eco130I CCWWGG 5 cut(s) 37, 1541, 1880, 2278, 2311
Eco31I GGTCTC 2 cut(s) 133, 2598
Eco32I GATATC 1 cut(s) 2293
Eco47I GGWCC 5 cut(s) 935, 1076, 1180, 1411, 2434
Eco57I CTGAAG 4 cut(s) 168, 1199, 1673, 1735
Eco88I CYCGRG 2 cut(s) 1631, 2260
Eco91I GGTNACC 1 cut(s) 1097
EcoO65I GGTNACC 1 cut(s) 1097
EcoRI GAATTC 2 cut(s) 647, 2327
EcoRII CCWGG 2 cut(s) 1971, 2742
EcoRV GATATC 1 cut(s) 2293
EcoT14I CCWWGG 5 cut(s) 37, 1541, 1880, 2278, 2311
ErhI CCWWGG 5 cut(s) 37, 1541, 1880, 2278, 2311
Esp3I CGTCTC 1 cut(s) 2496
FaeI CATG 9 cut(s) 41, 138, 180, 1363, 1436, 1717, 1837, 1871, 2134
FalI AAGNNNNNCTT 8 cut(s) 62, 94, 781, 813, 2025, 2057, 2262, 2294
FaqI GGGAC 2 cut(s) 194, 395
FatI CATG 9 cut(s) 37, 134, 176, 1359, 1432, 1713, 1833, 1867, 2130
Fnu4HI GCNGC 7 cut(s) 172, 271, 991, 1798, 2057, 2389, 2665
FokI GGATG 6 cut(s) 430, 598, 995, 1465, 1598, 2378
Fsp4HI GCNGC 7 cut(s) 172, 271, 991, 1798, 2057, 2389, 2665
FspI TGCGCA 1 cut(s) 2060
GlaI GCGC 1 cut(s) 2060
GluI GCNGC 7 cut(s) 172, 271, 991, 1798, 2057, 2389, 2665
GsaI CCCAGC 1 cut(s) 2645
GsuI CTGGAG 1 cut(s) 1955
HaeIII GGCC 4 cut(s) 405, 1437, 1521, 2550
HapII CCGG 3 cut(s) 295, 1650, 2193
HhaI GCGC 1 cut(s) 2061
Hin1I GRCGYC 1 cut(s) 1944
Hin1II CATG 9 cut(s) 41, 138, 180, 1363, 1436, 1717, 1837, 1871, 2134
Hin6I GCGC 1 cut(s) 2059
HinP1I GCGC 1 cut(s) 2059
HincII GTYRAC 1 cut(s) 1549
HindII GTYRAC 1 cut(s) 1549
HindIII AAGCTT 3 cut(s) 76, 542, 1396
HinfI GANTC 9 cut(s) 16, 304, 584, 1160, 1910, 1966, 2266, 2320, 2464
HpaI GTTAAC 1 cut(s) 1549
HpaII CCGG 3 cut(s) 295, 1650, 2193
HphI GGTGA 5 cut(s) 53, 1584, 1653, 2105, 2296
Hpy166II GTNNAC 3 cut(s) 1180, 1549, 2198
Hpy8I GTNNAC 3 cut(s) 1180, 1549, 2198
HpyCH4III ACNGT 6 cut(s) 192, 483, 762, 831, 1139, 2224
HpyCH4IV ACGT 4 cut(s) 755, 1403, 1944, 2489
HpyF10VI GCNNNNNNNGC 6 cut(s) 70, 171, 279, 878, 955, 2768
HpySE526I ACGT 4 cut(s) 755, 1403, 1944, 2489
Hsp92I GRCGYC 1 cut(s) 1944
Hsp92II CATG 9 cut(s) 41, 138, 180, 1363, 1436, 1717, 1837, 1871, 2134
HspAI GCGC 1 cut(s) 2059
Kpn2I TCCGGA 1 cut(s) 294
KspAI GTTAAC 1 cut(s) 1549
Kzo9I GATC 7 cut(s) 154, 226, 451, 804, 1589, 1759, 2179
LmnI GCTCC 2 cut(s) 257, 1266
Lsp1109I GCAGC 6 cut(s) 158, 282, 1002, 2043, 2400, 2676
LweI GCATC 6 cut(s) 1017, 1830, 1893, 1983, 2400, 2676
MaeII ACGT 4 cut(s) 755, 1403, 1944, 2489
MalI GATC 7 cut(s) 156, 228, 453, 806, 1591, 1761, 2181
MboI GATC 7 cut(s) 154, 226, 451, 804, 1589, 1759, 2179
MfeI CAATTG 2 cut(s) 428, 1862
MflI RGATCY 1 cut(s) 2179
MhlI GDGCHC 2 cut(s) 53, 2200
MlsI TGGCCA 3 cut(s) 405, 1437, 1521
MluNI TGGCCA 3 cut(s) 405, 1437, 1521
MlyI GAGTC 2 cut(s) 1919, 1975
MmeI TCCRAC 5 cut(s) 288, 813, 1288, 1389, 2412
Mox20I TGGCCA 3 cut(s) 405, 1437, 1521
MroI TCCGGA 1 cut(s) 294
MroXI GAANNNNTTC 5 cut(s) 358, 543, 1368, 1934, 2040
MscI TGGCCA 3 cut(s) 405, 1437, 1521
MslI CAYNNNNRTG 7 cut(s) 552, 1175, 1256, 1669, 1838, 2001, 2162
Msp20I TGGCCA 3 cut(s) 405, 1437, 1521
MspCI CTTAAG 1 cut(s) 1055
MspI CCGG 3 cut(s) 295, 1650, 2193
MspR9I CCNGG 4 cut(s) 1651, 1973, 2193, 2744
MunI CAATTG 2 cut(s) 428, 1862
Mva1269I GAATGC 3 cut(s) 851, 1800, 2061
MvaI CCWGG 2 cut(s) 1973, 2744
MvnI CGCG 1 cut(s) 1797
MwoI GCNNNNNNNGC 6 cut(s) 70, 171, 279, 878, 955, 2768
NciI CCSGG 2 cut(s) 1651, 2193
NcoI CCATGG 1 cut(s) 37
NdeII GATC 7 cut(s) 154, 226, 451, 804, 1589, 1759, 2179
NlaIII CATG 9 cut(s) 41, 138, 180, 1363, 1436, 1717, 1837, 1871, 2134
NlaIV GGNNCC 5 cut(s) 115, 253, 1726, 2549, 2741
NmuCI GTSAC 6 cut(s) 554, 756, 906, 1884, 1940, 2224
NsbI TGCGCA 1 cut(s) 2060
NspI RCATGY 1 cut(s) 1717
NspV TTCGAA 2 cut(s) 14, 1780
PaeR7I CTCGAG 1 cut(s) 1631
PciI ACATGT 1 cut(s) 1713
PcsI WCGNNNNNNNCGW 1 cut(s) 2495
PctI GAATGC 3 cut(s) 851, 1800, 2061
PdmI GAANNNNTTC 5 cut(s) 358, 543, 1368, 1934, 2040
PfeI GAWTC 7 cut(s) 16, 304, 584, 1160, 2266, 2320, 2464
PfoI TCCNGGA 1 cut(s) 1971
PkrI GCNGC 7 cut(s) 173, 272, 992, 1799, 2058, 2390, 2666
Ple19I CGATCG 1 cut(s) 807
PleI GAGTC 2 cut(s) 1918, 1974
PpsI GAGTC 2 cut(s) 1918, 1974
PscI ACATGT 1 cut(s) 1713
PsiI TTATAA 1 cut(s) 1857
Psp6I CCWGG 2 cut(s) 1971, 2742
PspEI GGTNACC 1 cut(s) 1097
PspFI CCCAGC 1 cut(s) 2641
PspGI CCWGG 2 cut(s) 1971, 2742
PspN4I GGNNCC 5 cut(s) 115, 253, 1726, 2549, 2741
PspPI GGNCC 6 cut(s) 935, 1076, 1180, 1411, 2434, 2548
PspXI VCTCGAGB 1 cut(s) 1631
PsrI GAACNNNNNNTAC 2 cut(s) 2561, 2593
PstNI CAGNNNCTG 1 cut(s) 2690
PsuI RGATCY 1 cut(s) 2179
PvuI CGATCG 1 cut(s) 807
RsaI GTAC 5 cut(s) 189, 498, 1684, 1694, 2757
RsaNI GTAC 5 cut(s) 188, 497, 1683, 1693, 2756
RseI CAYNNNNRTG 7 cut(s) 552, 1175, 1256, 1669, 1838, 2001, 2162
SatI GCNGC 7 cut(s) 172, 271, 991, 1798, 2057, 2389, 2665
Sau3AI GATC 7 cut(s) 154, 226, 451, 804, 1589, 1759, 2179
Sau96I GGNCC 6 cut(s) 935, 1076, 1180, 1411, 2434, 2548
ScaI AGTACT 2 cut(s) 1684, 1694
SchI GAGTC 2 cut(s) 1919, 1975
ScrFI CCNGG 4 cut(s) 1651, 1973, 2193, 2744
SduI GDGCHC 2 cut(s) 53, 2200
SfaNI GCATC 6 cut(s) 1017, 1830, 1893, 1983, 2400, 2676
Sfr274I CTCGAG 1 cut(s) 1631
SfuI TTCGAA 2 cut(s) 14, 1780
SinI GGWCC 5 cut(s) 935, 1076, 1180, 1411, 2434
SlaI CTCGAG 1 cut(s) 1631
SmiMI CAYNNNNRTG 7 cut(s) 552, 1175, 1256, 1669, 1838, 2001, 2162
SmlI CTYRAG 4 cut(s) 1055, 1631, 1907, 2296
SmoI CTYRAG 4 cut(s) 1055, 1631, 1907, 2296
SpeI ACTAGT 1 cut(s) 2476
SsiI CCGC 6 cut(s) 54, 933, 1203, 1733, 1797, 2540
StyD4I CCNGG 4 cut(s) 1649, 1971, 2191, 2742
StyI CCWWGG 5 cut(s) 37, 1541, 1880, 2278, 2311
TaaI ACNGT 6 cut(s) 192, 483, 762, 831, 1139, 2224
TaiI ACGT 4 cut(s) 758, 1406, 1947, 2492
TatI WGTACW 2 cut(s) 1682, 1692
TauI GCSGC 1 cut(s) 1800
TfiI GAWTC 7 cut(s) 16, 304, 584, 1160, 2266, 2320, 2464
TscAI CASTG 8 cut(s) 197, 486, 559, 765, 1759, 1893, 1932, 1945
TseFI GTSAC 6 cut(s) 554, 756, 906, 1884, 1940, 2224
TseI GCWGC 6 cut(s) 171, 270, 990, 2056, 2388, 2664
Tsp45I GTSAC 6 cut(s) 554, 756, 906, 1884, 1940, 2224
TspGWI ACGGA 1 cut(s) 2794
TspRI CASTG 8 cut(s) 197, 486, 559, 765, 1759, 1893, 1932, 1945
Vha464I CTTAAG 1 cut(s) 1055
VneI GTGCAC 1 cut(s) 2196
VpaK11BI GGWCC 5 cut(s) 935, 1076, 1180, 1411, 2434
XceI RCATGY 1 cut(s) 1717
XcmI CCANNNNNNNNNTGG 1 cut(s) 713
XhoI CTCGAG 1 cut(s) 1631
XmnI GAANNNNTTC 5 cut(s) 358, 543, 1368, 1934, 2040
ZraI GACGTC 1 cut(s) 1945
ZrmI AGTACT 2 cut(s) 1684, 1694
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.