Rroxscaffold_4G00306260

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000024
Physical Location & Seq
Reverse (-)
27052043 .. 27060600
8558 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00306260.1

Sequence Viewer

Length: 2925 bp
ATGCGGATAGCCTTCGCTCCGAATCGAGTGGGCATTCGAAGAAACGAATTTGATCGGGATTCCGAGTCCGATTGCGAATCGGAGTCGCCGCTTCCGATGGGTTTGGGGTTTTCACCGCGAATCGGAGGAATGGTGTACGCTCCGATCGTCGATGCCATTGACAACGAGCTCATCACCTTCGCCGCCGCGAAGCGGCAAGGATTGCTCGATGATCGGTCGCCGGCGAGCAAGAGTGAGAGAGAGAGAGAGTTTCGGACGACGACTTCGACATCGCCACCATCGGATAAGGAGCCATCTTATTGTCCTGATGAGGAAAGCTCCGCGTTGCTACAATTCAAGCACAGCTTTACTATCAATGCATCTGCTTCGGGTGCAGAGGGTGCTTATCCGAAAGTGAATCTTCCTATGCTCACCCAACTCGACCTCTCTTTCTCCGTCTTTGCTGGTCAAGTCCCATCTCAACTTTCACAGTTGGTTAAATTGTCACTCCTCAATCTTTCTTCCAATACCGAACCTTCTTCTGGTGTAGGATTGTTGAAACTTGATGGATCCAATTTCAGAAATCTAGTTCAAAACTTAACCAGTCTAAAACATCTTTGTCTCCGTCACATCAACATATCTTCGACAATTCCCCATTCCATGGCCAATTTATCATTTTTGACAACCCTCGACTTACATCAGTGCGAGTTGTTTGGAGACTTCCCGGTAACAATTTTCCACTTCCAAAACTTGAAAAATCTTTATCTGAGAGACAACCAAGATCTCATTGGTTATTTGCCTGAATTTAATCAAAGTAGTCGTCTCACAACACTCGATGTTCATGGAACTAGATTTTCAGGGAACTTTCCTTCTTCCATCGGAAAGATTAATTCTTTGAAGCAGTTAGATGTGGCTGCATGCAATTTTTCAGCAGGGTTGATTCCATCTTCTCTAGGTAATCTTAGACAGCTCACATATTTCGACATTTCAGCAAACAAATTTGGAGGTCCAATTCCTGATTCTTTTGCAAACCTTACAAAATTGACTACTTTTAGGATTGCTACAAGTCCATCAACTACGGGTCCGGTCCCATCTTGGATAGGTAACTTCAGCAAACTAGTTTACCTAGATTTTTCATATAGTGGACTGAATAGTTCAATTCCTGCGTCATTTTCCAATCTCACGAACCTTGAGATTCTTTATCTTCATTACAATGACCTGAGAGGTACAGTGGAGTTTCAAACATTTCGAAACTTACAAAATGTCAATCAACTCAACCTAAATGGTAATAATCTGGAATTTCTCACTGATTCCGTGATTATGAATGCAACAGTTCCACAGTTCAAGTTTCTAGGATTGAGTAGATGCAACTTGACACAGTTCCCATATTTCTTAAGATATCAAAAAAATTTGCAGACTTTGTACCTTGATCAAAACAAAATCCATGGCCAAGTACCCAAATGGATGTGGAACATGAGCACCGAAAGTTTGAAGCTCTTCCACCTTGGCCAAAACCTCCTTTCAGGCTTTGAGCAACTTCCAGTTGTGCTTCCTTGGATTAACTTACAATTTTTAGGTCTTGCATCAAACATGTTCCATGGGCCACTCCCAATACCGGCAGCATCCACCTTAGGCTATGAAGCCCACGGTAACAGATTCGCTGGAGAAGTTCCACCAGGGATCTGCAATATGAGTTCTCTTCTGGCCCTTGATGCGTCTTATAACAACTTCAGTGGCATGATTCCGCAGTGTTTCGGAAACTTGAGTGACCATCTGACATTTCTGCTGCTTGGAAATAACTCATTTCATGGCACTCTTCCTCAAACATTTACCAACAAAAGCAACTTGAGGATGCTTGATGTGAGTCAAAATCAATTGCAAGGGCAATTACCGAGGTCATTGGCTAATTGTTTGAAGCTTGAGACTTTAATTCTGTCAAACAATAACTTGAGTGATGCTTTCCCCTTTTGGTTGGCGACTCTTCCGGAGTTAAAACTTTTGGCAATGCGGCATAATGGGTTCCATGGAGTGATAGGAAAGCCTGAAAACAATCAACGGTTCCCCAAGTTGCGTATTTTAGATATGTCTTATAACAATTTCACCGGCCAGTTTCTAGCTGAGCACATCTTCTTTGAGTATGCCGTGAGACCAAATATGACTGTCAGCCAGGCAACATACATGGAGGCTGACATCAGCTACGAAGCTGGTAATGGTGACATCACTTTCTATTATGATTCCACGATTACAATAACGACTAAAGGTCTGGACAGATACTATTCAAAGATTCAAGAAGCCTTTGCAGTCATTGATATCTCATGCAACAAATTTGAAGGGAAGATTGATGAATGGATTGGGAAATCTAAAAGGGCTTCGCTCGCTGAATGTCCTATACCAAGTGGAACCCAACTCAGGGGGTTTAATGTCACTGCTTATGAGGGAAACTCCGGACTGTGTGGAGATCCACTGCCAAAGAAATGCGGGAACTCTAATACCCCGGCTCAACTGCCACCTTCTGGAACAGAAAACAACAGTTCAGGGTCCGGAATTGAATTTGATTGGAAATTTGTGTTGTCGGGTTTTGGAAGTGGGTTGGTGGTGGGAGTTGTACTTGCGGATGTGGCAGTCACACGGAGGCCTGAGTTGTTTCTTGAGATGGTTGGAAGATTGATCGGACTAATTGAATTTATGACAAGTTGCAAGAGCAAGAGTGCCCGCGCTTTGCCGCGGGATGTGAATTGTAACAAAAAGAGGCTATCTGAGTTTGAAGTTTACTTTGTTACAGTTGCTGCTGGAACATTTTTTGAACTTTTGTTCCAGGAGATTGTGAAAAGAAAGAGCGAGAATGAAGGTCTTGAGGTTAAGTTTCAGGCTTTGGAAGGCAAAAAGCTTGCGGTGGAAGAAGAGATTAGGGCATTGAAGAAAGGAAGTGATGAAATTAGGGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

974

Amino Acids

108.12

Weight (kDa)

6.32

Isoelectric Point (pI)

40.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 189 - 298 1.7e-09 Leucine-rich repeat region
LRR_14 PF23598 290 - 488 1.2e-10 Leucine-rich repeat region
LRR_ComC PF24141 292 - 606 5.7e-08 EGF-like domain-containing protein ComC LRR domain
LRR_8 PF13855 584 - 643 1.6e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1701, 2070
AccB7I CCANNNNNTGG 2 cut(s) 640, 2492
AccII CGCG 5 cut(s) 118, 188, 323, 2694, 2704
AccIII TCCGGA 3 cut(s) 1963, 2423, 2519
AclWI GGATC 4 cut(s) 543, 556, 1667, 2432
AcoI YGGCCR 4 cut(s) 642, 1426, 1486, 2083
AcsI RAATTY 9 cut(s) 47, 782, 977, 1277, 1387, 2303, 2528, 2540, 2660
AcuI CTGAAG 2 cut(s) 1072, 1693
AfaI GTAC 5 cut(s) 137, 1207, 1403, 1434, 2586
AfiI CCNNNNNNNGG 8 cut(s) 122, 192, 521, 640, 1594, 2388, 2389, 2492
AflII CTTAAG 1 cut(s) 1372
AflIII ACRYGT 1 cut(s) 1569
AhdI GACNNNNNGTC 1 cut(s) 2238
AhlI ACTAGT 1 cut(s) 1096
AjnI CCWGG 3 cut(s) 1654, 2145, 2793
AjuI GAANNNNNNNTTGG 2 cut(s) 982, 1014
AloI GAACNNNNNNTCC 2 cut(s) 2775, 2807
Alw21I GWGCWC 3 cut(s) 171, 1460, 2103
Alw26I GTCTC 6 cut(s) 605, 690, 744, 806, 1895, 2119
AlwI GGATC 4 cut(s) 543, 556, 1667, 2432
AlwNI CAGNNNCTG 1 cut(s) 2765
Aor13HI TCCGGA 3 cut(s) 1963, 2423, 2519
AoxI GGCC 7 cut(s) 642, 1426, 1486, 1580, 1683, 2083, 2612
ApeKI GCWGC 4 cut(s) 893, 1598, 1765, 2765
ApoI RAATTY 9 cut(s) 47, 782, 977, 1277, 1387, 2303, 2528, 2540, 2660
ArsI GACNNNNNNTTYG 4 cut(s) 247, 279, 784, 816
AseI ATTAAT 1 cut(s) 867
Asp700I GAANNNNTTC 1 cut(s) 1475
AspLEI GCGC 1 cut(s) 2696
AspS9I GGNCC 6 cut(s) 986, 1061, 1066, 1580, 1684, 2517
AsuC2I CCSGG 2 cut(s) 704, 2474
AsuHPI GGTGA 5 cut(s) 105, 166, 403, 2071, 2204
AsuII TTCGAA 2 cut(s) 37, 1228
AvaII GGWCC 4 cut(s) 986, 1061, 1066, 2517
AxyI CCTNAGG 1 cut(s) 1609
BaeGI GKGCMC 1 cut(s) 2692
BalI TGGCCA 3 cut(s) 644, 1428, 1488
BamHI GGATCC 1 cut(s) 548
BanII GRGCYC 1 cut(s) 171
Bbv12I GWGCWC 3 cut(s) 171, 1460, 2103
BbvI GCAGC 4 cut(s) 880, 1610, 1752, 2752
BceAI ACGGC 1 cut(s) 2105
BcgI CGANNNNNNTGC 2 cut(s) 348, 382
BciT130I CCWGG 3 cut(s) 1656, 2147, 2795
BclI TGATCA 1 cut(s) 1408
BcnI CCSGG 2 cut(s) 704, 2474
BcoDI GTCTC 6 cut(s) 605, 690, 744, 806, 1895, 2119
BcuI ACTAGT 1 cut(s) 1096
BfaI CTAG 7 cut(s) 566, 828, 932, 1097, 1106, 1331, 2093
BfrI CTTAAG 1 cut(s) 1372
BglII AGATCT 1 cut(s) 760
BlpI GCTNAGC 1 cut(s) 2097
Bme1390I CCNGG 5 cut(s) 704, 1656, 2147, 2474, 2795
Bme18I GGWCC 4 cut(s) 986, 1061, 1066, 2517
BmeRI GACNNNNNGTC 1 cut(s) 2238
BmgT120I GGNCC 6 cut(s) 986, 1061, 1066, 1580, 1684, 2517
BmiI GGNNCC 8 cut(s) 291, 550, 1062, 1068, 2000, 2039, 2380, 2518
BmrFI CCNGG 5 cut(s) 704, 1656, 2147, 2474, 2795
BmsI GCATC 8 cut(s) 142, 368, 1334, 1571, 1610, 1681, 1821, 1924
BplI GAGNNNNNCTC 4 cut(s) 302, 334, 2405, 2437
BpmI CTGGAG 1 cut(s) 1662
Bpu1102I GCTNAGC 1 cut(s) 2097
Bpu14I TTCGAA 2 cut(s) 37, 1228
BpuEI CTTGAG 7 cut(s) 1190, 1762, 1846, 1919, 1948, 2648, 2852
BpuMI CCSGG 2 cut(s) 704, 2474
BsaI GGTCTC 1 cut(s) 2119
BsaWI WCCGGW 4 cut(s) 1063, 1963, 2423, 2519
BsaXI ACNNNNNCTCC 2 cut(s) 117, 147
Bsc4I CCNNNNNNNGG 8 cut(s) 122, 192, 521, 640, 1594, 2388, 2389, 2492
Bse118I RCCGGY 3 cut(s) 220, 1594, 2081
Bse1I ACTGG 3 cut(s) 582, 1520, 2086
Bse21I CCTNAGG 1 cut(s) 1609
Bse3DI GCAATG 1 cut(s) 1989
BseAI TCCGGA 3 cut(s) 1963, 2423, 2519
BseBI CCWGG 3 cut(s) 1656, 2147, 2795
BseGI GGATG 5 cut(s) 1449, 1601, 1836, 2599, 2713
BseLI CCNNNNNNNGG 8 cut(s) 122, 192, 521, 640, 1594, 2388, 2389, 2492
BseMI GCAATG 1 cut(s) 1989
BseMII CTCAG 6 cut(s) 737, 1190, 2088, 2401, 2607, 2727
BseNI ACTGG 3 cut(s) 582, 1520, 2086
BseRI GAGGAG 1 cut(s) 479
BseSI GKGCMC 1 cut(s) 2692
BseXI GCAGC 4 cut(s) 880, 1610, 1752, 2752
BsgI GTGCAG 1 cut(s) 393
Bsh1236I CGCG 5 cut(s) 118, 188, 323, 2694, 2704
Bsh1285I CGRYCG 2 cut(s) 147, 218
BshFI GGCC 7 cut(s) 644, 1428, 1488, 1582, 1685, 2085, 2614
BsiEI CGRYCG 2 cut(s) 147, 218
BsiHKAI GWGCWC 3 cut(s) 171, 1460, 2103
BsiSI CCGG 9 cut(s) 221, 704, 1064, 1595, 1964, 2082, 2424, 2474, 2520
BslFI GGGAC 2 cut(s) 437, 1052
BslI CCNNNNNNNGG 8 cut(s) 122, 192, 521, 640, 1594, 2388, 2389, 2492
BsmAI GTCTC 6 cut(s) 605, 690, 744, 806, 1895, 2119
BsmBI CGTCTC 1 cut(s) 806
BsmFI GGGAC 2 cut(s) 437, 1052
BsmI GAATGC 2 cut(s) 33, 1309
BsnI GGCC 7 cut(s) 644, 1428, 1488, 1582, 1685, 2085, 2614
Bso31I GGTCTC 1 cut(s) 2119
Bsp119I TTCGAA 2 cut(s) 37, 1228
Bsp1286I GDGCHC 4 cut(s) 171, 1460, 2103, 2692
Bsp13I TCCGGA 3 cut(s) 1963, 2423, 2519
Bsp143I GATC 9 cut(s) 52, 144, 211, 548, 760, 1408, 1659, 2437, 2646
Bsp1720I GCTNAGC 1 cut(s) 2097
Bsp19I CCATGG 4 cut(s) 639, 1423, 1576, 2002
BspANI GGCC 7 cut(s) 644, 1428, 1488, 1582, 1685, 2085, 2614
BspCNI CTCAG 6 cut(s) 738, 1191, 2089, 2400, 2608, 2728
BspEI TCCGGA 3 cut(s) 1963, 2423, 2519
BspFNI CGCG 5 cut(s) 118, 188, 323, 2694, 2704
BspLI GGNNCC 8 cut(s) 291, 550, 1062, 1068, 2000, 2039, 2380, 2518
BspPI GGATC 4 cut(s) 543, 556, 1667, 2432
BspQI GCTCTTC 1 cut(s) 1481
BspT104I TTCGAA 2 cut(s) 37, 1228
BspTI CTTAAG 1 cut(s) 1372
BspTNI GGTCTC 1 cut(s) 2119
BsrDI GCAATG 1 cut(s) 1989
BsrFI RCCGGY 3 cut(s) 220, 1594, 2081
BsrI ACTGG 3 cut(s) 582, 1520, 2086
BssAI RCCGGY 3 cut(s) 220, 1594, 2081
BssMI GATC 9 cut(s) 52, 144, 211, 548, 760, 1408, 1659, 2437, 2646
BssT1I CCWWGG 6 cut(s) 639, 1423, 1483, 1532, 1576, 2002
Bst2UI CCWGG 3 cut(s) 1656, 2147, 2795
Bst6I CTCTTC 5 cut(s) 1481, 1683, 1800, 1965, 2874
BstAFI CTTAAG 1 cut(s) 1372
BstAPI GCANNNNNTGC 2 cut(s) 202, 380
BstBI TTCGAA 2 cut(s) 37, 1228
BstC8I GCNNGC 6 cut(s) 222, 226, 898, 2355, 2692, 2868
BstDEI CTNAG 8 cut(s) 746, 941, 1199, 1609, 2097, 2387, 2616, 2736
BstDSI CCRYGG 6 cut(s) 639, 1423, 1576, 1624, 2002, 2702
BstF5I GGATG 5 cut(s) 1449, 1601, 1836, 2599, 2713
BstFNI CGCG 5 cut(s) 118, 188, 323, 2694, 2704
BstHHI GCGC 1 cut(s) 2696
BstKTI GATC 9 cut(s) 55, 147, 214, 551, 763, 1411, 1662, 2440, 2649
BstMAI GTCTC 6 cut(s) 605, 690, 744, 806, 1895, 2119
BstMBI GATC 9 cut(s) 52, 144, 211, 548, 760, 1408, 1659, 2437, 2646
BstMCI CGRYCG 2 cut(s) 147, 218
BstMWI GCNNNNNNNGC 6 cut(s) 202, 371, 380, 1691, 2354, 2597
BstNI CCWGG 3 cut(s) 1656, 2147, 2795
BstNSI RCATGY 2 cut(s) 900, 1573
BstSCI CCNGG 5 cut(s) 702, 1654, 2145, 2472, 2793
BstSLI GKGCMC 1 cut(s) 2692
BstUI CGCG 5 cut(s) 118, 188, 323, 2694, 2704
BstV1I GCAGC 4 cut(s) 880, 1610, 1752, 2752
BstX2I RGATCY 4 cut(s) 548, 760, 1659, 2437
BstYI RGATCY 4 cut(s) 548, 760, 1659, 2437
Bsu36I CCTNAGG 1 cut(s) 1609
BsuRI GGCC 7 cut(s) 644, 1428, 1488, 1582, 1685, 2085, 2614
BtgI CCRYGG 6 cut(s) 639, 1423, 1576, 1624, 2002, 2702
BtgZI GCGATG 1 cut(s) 255
BtsCI GGATG 5 cut(s) 1449, 1601, 1836, 2599, 2713
BtsI GCAGTG 3 cut(s) 1733, 2403, 2441
BtsIMutI CAGTG 7 cut(s) 686, 1215, 1284, 1717, 1733, 2403, 2441
Cac8I GCNNGC 6 cut(s) 222, 226, 898, 2355, 2692, 2868
CaiI CAGNNNCTG 1 cut(s) 2765
CfoI GCGC 1 cut(s) 2696
Cfr10I RCCGGY 3 cut(s) 220, 1594, 2081
Cfr13I GGNCC 6 cut(s) 986, 1061, 1066, 1580, 1684, 2517
Cfr42I CCGCGG 1 cut(s) 2705
CseI GACGC 2 cut(s) 1134, 1683
Csp6I GTAC 5 cut(s) 136, 1206, 1402, 1433, 2585
CspCI CAANNNNNGTGG 2 cut(s) 1693, 1728
CviQI GTAC 5 cut(s) 136, 1206, 1402, 1433, 2585
DdeI CTNAG 8 cut(s) 746, 941, 1199, 1609, 2097, 2387, 2616, 2736
DpnI GATC 9 cut(s) 54, 146, 213, 550, 762, 1410, 1661, 2439, 2648
DpnII GATC 9 cut(s) 52, 144, 211, 548, 760, 1408, 1659, 2437, 2646
DriI GACNNNNNGTC 1 cut(s) 2238
EaeI YGGCCR 4 cut(s) 642, 1426, 1486, 2083
Eam1104I CTCTTC 5 cut(s) 1481, 1683, 1800, 1965, 2874
Eam1105I GACNNNNNGTC 1 cut(s) 2238
EarI CTCTTC 5 cut(s) 1481, 1683, 1800, 1965, 2874
Ecl136II GAGCTC 1 cut(s) 169
Eco130I CCWWGG 6 cut(s) 639, 1423, 1483, 1532, 1576, 2002
Eco147I AGGCCT 1 cut(s) 2614
Eco24I GRGCYC 1 cut(s) 171
Eco31I GGTCTC 1 cut(s) 2119
Eco32I GATATC 2 cut(s) 1379, 2290
Eco47I GGWCC 4 cut(s) 986, 1061, 1066, 2517
Eco53kI GAGCTC 1 cut(s) 169
Eco57I CTGAAG 2 cut(s) 1072, 1693
Eco81I CCTNAGG 1 cut(s) 1609
EcoICRI GAGCTC 1 cut(s) 169
EcoRII CCWGG 3 cut(s) 1654, 2145, 2793
EcoRV GATATC 2 cut(s) 1379, 2290
EcoT14I CCWWGG 6 cut(s) 639, 1423, 1483, 1532, 1576, 2002
EcoT22I ATGCAT 1 cut(s) 361
EcoT38I GRGCYC 1 cut(s) 171
ErhI CCWWGG 6 cut(s) 639, 1423, 1483, 1532, 1576, 2002
Esp3I CGTCTC 1 cut(s) 806
FalI AAGNNNNNCTT 4 cut(s) 329, 361, 384, 416
FaqI GGGAC 2 cut(s) 437, 1052
FauI CCCGC 3 cut(s) 2450, 2697, 2699
FbaI TGATCA 1 cut(s) 1408
FokI GGATG 5 cut(s) 1456, 1588, 1843, 2606, 2720
FriOI GRGCYC 1 cut(s) 171
FspBI CTAG 7 cut(s) 566, 828, 932, 1097, 1106, 1331, 2093
GlaI GCGC 1 cut(s) 2695
GsuI CTGGAG 1 cut(s) 1662
HaeIII GGCC 7 cut(s) 644, 1428, 1488, 1582, 1685, 2085, 2614
HapII CCGG 9 cut(s) 221, 704, 1064, 1595, 1964, 2082, 2424, 2474, 2520
HgaI GACGC 2 cut(s) 1134, 1683
HhaI GCGC 1 cut(s) 2696
Hin6I GCGC 1 cut(s) 2694
HinP1I GCGC 1 cut(s) 2694
HindIII AAGCTT 2 cut(s) 1895, 2864
HpaII CCGG 9 cut(s) 221, 704, 1064, 1595, 1964, 2082, 2424, 2474, 2520
HphI GGTGA 5 cut(s) 105, 166, 403, 2071, 2204
Hpy166II GTNNAC 4 cut(s) 136, 1102, 1124, 2749
Hpy8I GTNNAC 4 cut(s) 136, 1102, 1124, 2749
Hpy99I CGWCG 2 cut(s) 152, 262
HpyAV CCTTC 8 cut(s) 22, 187, 525, 858, 2303, 2499, 2819, 2849
HpyF10VI GCNNNNNNNGC 6 cut(s) 202, 371, 380, 1691, 2354, 2597
HpyF3I CTNAG 8 cut(s) 746, 941, 1199, 1609, 2097, 2387, 2616, 2736
HspAI GCGC 1 cut(s) 2694
Kpn2I TCCGGA 3 cut(s) 1963, 2423, 2519
KroI GCCGGC 1 cut(s) 220
KroNI GCCGGC 1 cut(s) 222
Ksp22I TGATCA 1 cut(s) 1408
KspI CCGCGG 1 cut(s) 2705
Kzo9I GATC 9 cut(s) 52, 144, 211, 548, 760, 1408, 1659, 2437, 2646
LguI GCTCTTC 1 cut(s) 1481
LmnI GCTCC 4 cut(s) 22, 145, 289, 323
Lsp1109I GCAGC 4 cut(s) 880, 1610, 1752, 2752
LweI GCATC 8 cut(s) 142, 368, 1334, 1571, 1610, 1681, 1821, 1924
MaeI CTAG 7 cut(s) 566, 828, 932, 1097, 1106, 1331, 2093
MalI GATC 9 cut(s) 54, 146, 213, 550, 762, 1410, 1661, 2439, 2648
MboI GATC 9 cut(s) 52, 144, 211, 548, 760, 1408, 1659, 2437, 2646
MfeI CAATTG 1 cut(s) 1853
MflI RGATCY 4 cut(s) 548, 760, 1659, 2437
MhlI GDGCHC 4 cut(s) 171, 1460, 2103, 2692
MlsI TGGCCA 3 cut(s) 644, 1428, 1488
MluNI TGGCCA 3 cut(s) 644, 1428, 1488
MlyI GAGTC 4 cut(s) 74, 92, 1852, 1951
MmeI TCCRAC 1 cut(s) 2617
Mox20I TGGCCA 3 cut(s) 644, 1428, 1488
Mph1103I ATGCAT 1 cut(s) 361
MreI CGCCGGCG 1 cut(s) 220
MroI TCCGGA 3 cut(s) 1963, 2423, 2519
MroNI GCCGGC 1 cut(s) 220
MroXI GAANNNNTTC 1 cut(s) 1475
MscI TGGCCA 3 cut(s) 644, 1428, 1488
MslI CAYNNNNRTG 1 cut(s) 1191
Msp20I TGGCCA 3 cut(s) 644, 1428, 1488
MspA1I CMGCKG 1 cut(s) 2704
MspCI CTTAAG 1 cut(s) 1372
MspI CCGG 9 cut(s) 221, 704, 1064, 1595, 1964, 2082, 2424, 2474, 2520
MspR9I CCNGG 5 cut(s) 704, 1656, 2147, 2474, 2795
MunI CAATTG 1 cut(s) 1853
Mva1269I GAATGC 2 cut(s) 33, 1309
MvaI CCWGG 3 cut(s) 1656, 2147, 2795
MvnI CGCG 5 cut(s) 118, 188, 323, 2694, 2704
MwoI GCNNNNNNNGC 6 cut(s) 202, 371, 380, 1691, 2354, 2597
NaeI GCCGGC 1 cut(s) 222
NciI CCSGG 2 cut(s) 704, 2474
NcoI CCATGG 4 cut(s) 639, 1423, 1576, 2002
NdeII GATC 9 cut(s) 52, 144, 211, 548, 760, 1408, 1659, 2437, 2646
NgoMIV GCCGGC 1 cut(s) 220
NlaIV GGNNCC 8 cut(s) 291, 550, 1062, 1068, 2000, 2039, 2380, 2518
NmuCI GTSAC 6 cut(s) 483, 605, 1745, 2192, 2401, 2602
NsiI ATGCAT 1 cut(s) 361
NspI RCATGY 2 cut(s) 900, 1573
NspV TTCGAA 2 cut(s) 37, 1228
PaeI GCATGC 1 cut(s) 900
PceI AGGCCT 1 cut(s) 2614
PciI ACATGT 1 cut(s) 1569
PciSI GCTCTTC 1 cut(s) 1481
PcsI WCGNNNNNNNCGW 3 cut(s) 92, 144, 263
PctI GAATGC 2 cut(s) 33, 1309
PdiI GCCGGC 1 cut(s) 222
PdmI GAANNNNTTC 1 cut(s) 1475
PflMI CCANNNNNTGG 2 cut(s) 640, 2492
PfoI TCCNGGA 1 cut(s) 2793
Ple19I CGATCG 1 cut(s) 147
PleI GAGTC 4 cut(s) 73, 91, 1851, 1951
PpsI GAGTC 4 cut(s) 73, 91, 1851, 1951
PscI ACATGT 1 cut(s) 1569
PshBI ATTAAT 1 cut(s) 867
PsiI TTATAA 2 cut(s) 1701, 2070
Psp124BI GAGCTC 1 cut(s) 171
Psp6I CCWGG 3 cut(s) 1654, 2145, 2793
PspGI CCWGG 3 cut(s) 1654, 2145, 2793
PspN4I GGNNCC 8 cut(s) 291, 550, 1062, 1068, 2000, 2039, 2380, 2518
PspPI GGNCC 6 cut(s) 986, 1061, 1066, 1580, 1684, 2517
PstNI CAGNNNCTG 1 cut(s) 2765
PsuI RGATCY 4 cut(s) 548, 760, 1659, 2437
PvuI CGATCG 1 cut(s) 147
RsaI GTAC 5 cut(s) 137, 1207, 1403, 1434, 2586
RsaNI GTAC 5 cut(s) 136, 1206, 1402, 1433, 2585
RseI CAYNNNNRTG 1 cut(s) 1191
SacI GAGCTC 1 cut(s) 171
SacII CCGCGG 1 cut(s) 2705
SapI GCTCTTC 1 cut(s) 1481
Sau3AI GATC 9 cut(s) 52, 144, 211, 548, 760, 1408, 1659, 2437, 2646
Sau96I GGNCC 6 cut(s) 986, 1061, 1066, 1580, 1684, 2517
SchI GAGTC 4 cut(s) 74, 92, 1852, 1951
ScrFI CCNGG 5 cut(s) 704, 1656, 2147, 2474, 2795
SduI GDGCHC 4 cut(s) 171, 1460, 2103, 2692
SfaNI GCATC 8 cut(s) 142, 368, 1334, 1571, 1610, 1681, 1821, 1924
Sfr303I CCGCGG 1 cut(s) 2705
SfuI TTCGAA 2 cut(s) 37, 1228
SgrAI CRCCGGYG 1 cut(s) 220
SgrBI CCGCGG 1 cut(s) 2705
SinI GGWCC 4 cut(s) 986, 1061, 1066, 2517
SmiMI CAYNNNNRTG 1 cut(s) 1191
SmlI CTYRAG 8 cut(s) 1169, 1372, 1741, 1825, 1898, 1927, 2627, 2831
SmoI CTYRAG 8 cut(s) 1169, 1372, 1741, 1825, 1898, 1927, 2627, 2831
SpeI ACTAGT 1 cut(s) 1096
SphI GCATGC 1 cut(s) 900
SseBI AGGCCT 1 cut(s) 2614
SspMI CTAG 7 cut(s) 566, 828, 932, 1097, 1106, 1331, 2093
SstI GAGCTC 1 cut(s) 171
StuI AGGCCT 1 cut(s) 2614
StyD4I CCNGG 5 cut(s) 702, 1654, 2145, 2472, 2793
StyI CCWWGG 6 cut(s) 639, 1423, 1483, 1532, 1576, 2002
TaqII GACCGA 1 cut(s) 204
TatI WGTACW 1 cut(s) 2584
TauI GCSGC 6 cut(s) 91, 185, 188, 196, 1990, 2704
TscAI CASTG 7 cut(s) 686, 1215, 1291, 1717, 1733, 2410, 2448
TseFI GTSAC 6 cut(s) 483, 605, 1745, 2192, 2401, 2602
TseI GCWGC 4 cut(s) 893, 1598, 1765, 2765
Tsp45I GTSAC 6 cut(s) 483, 605, 1745, 2192, 2401, 2602
TspDTI ATGAA 9 cut(s) 809, 1104, 1175, 1316, 1632, 1775, 2337, 2838, 2925
TspGWI ACGGA 4 cut(s) 424, 593, 1282, 2623
TspRI CASTG 7 cut(s) 686, 1215, 1291, 1717, 1733, 2410, 2448
Van91I CCANNNNNTGG 2 cut(s) 640, 2492
Vha464I CTTAAG 1 cut(s) 1372
VpaK11BI GGWCC 4 cut(s) 986, 1061, 1066, 2517
VspI ATTAAT 1 cut(s) 867
XapI RAATTY 9 cut(s) 47, 782, 977, 1277, 1387, 2303, 2528, 2540, 2660
XceI RCATGY 2 cut(s) 900, 1573
XcmI CCANNNNNNNNNTGG 1 cut(s) 764
XmnI GAANNNNTTC 1 cut(s) 1475
XspI CTAG 7 cut(s) 566, 828, 932, 1097, 1106, 1331, 2093
Zsp2I ATGCAT 1 cut(s) 361
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.