Rorug05G0572200

PAN-like domain

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
76538082 .. 76541632
3551 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0572200.1

Sequence Viewer

Length: 1857 bp
ATGGAAACAGTTAAGAACTTAAATTGCATATACAGAAACCCAAACGAACCCATTGAAGCTCGAGTCAAGGACCTCCTTTCTCGCATGACTTTGAAAGAAAAGGTGGGGCAGATGACCCAGATAGAGCGTCAGGTCGCTACACCTTCTGCCATTAAAGACTTCTCAATCGGGAGTGTAACCAGTGGTGCAGGAAGTGGGCCGTTTAGGAAGGCTTTATCGGCGGACTGGGCTGATATGGTTGACGGGTTTCAGAGGTGTGCGCTGGAAACCCGGCTCCGGATTCCATTGATATATGGGATTGATGCTGTCCATGGGAACAATAGCGTCTACGGTGCCACTATATTTCCTCATAATGTTGGTCTTGGGGCTACCAGAGATGCGGATTTGGCTCAAAGGATTGGTGAGGCAACTGCTCTTGAAGTCAGCGCTAGTGGCATGCACTACACTTTTGCTCCCTGTGTAGCTGTATGCAGGGATCCCAGGTGGGGACGATGCTACGAGAGTTACAGCGAAGACACTGAAATTGTTAGAAAGATGACATCCATTATCTCAGGCTTGCAGGGGAAGCCACCCCAAGGGCATGAAAATGGTTACCCTTTTATAACGGGAAGAAACAACACAATTGCATGCGCCAAGCATTTTGTTGGAGATGGCGGTACACATAAAGGTGTAAATGAGGGAAATACCATATCATCTTATGATGACTTAGAGAGGATTCATATGGCACCTTATCTGGACTGCATTTCTCAAGGAGTTTCCACTATTATGGCATCTTATTCCAGCTGGAATGGAAATAGACTACATGCTGATCGTTTTCTCCTGACTGAAATCTTGAAAGAAAAGCTAGGATTTAAGGGAATTGTGATTTCTGACTGGGATGGTATTGAAACACTCAGTGAGCCTCAAGGGTCAAACTATCGTTTCTGCGTTTTATCTGCTGTCAATGCTGGAATTGACATGTTTATGGTGCCTTTCAGATTTGAAAATTTTGTGGATGATTTAGTGAATCTGGTGGAACATGGGGAGATACCAATGTCCAGGATAGATGATGCTGTTGAGAGAATACTGAGAGTAAAGTTTGTTGCTGGTATTTTTGAACATCCCTTTTCTGATAGATCTTTGCTGGACAAAGTTGGTTGTAAGCTGCATAGGGATCTGGCATGCGAAGCTGTTCGCAAGTCATTGGTTCTGTTGAAGAATGGAAAGGAGCCAAGAAAACCTTTTCTTCCATTAGATAGAAAAGCCAAAAGAATACTGGTTACCGGAATGCATGCTGATGATCTTGGATATCAGTGTGGAGGATGGACAGTTACTAAGGCTGGATTAAGTGGCAGGTTCACCATTGGCACAACCATCTTGGAAGCTATCAAGAAGGCAGTTGGAGAGGAAACAGAAATAATTTATGAGCAACTGCCATCGACGTATACCCTAGCACGTACAGATATCTCTTTTGCAGTTGTTGCTGTTGGTGAAGGTTCATATGCCGAATGCAAGGGCGACAACTTGGAGCTTGTGATTCCTTTTGATGGACCCGATGTAATAAGCTCAGTTGCTGACAGAATCCCCACATTGGTGATTCTGATATCTGGAAGACCCTTAACTGTAGAGCCAAGTCTCTTGGAAAAGATGGATGCTCTTGTTGCTGCTTGGTTGCCTGGTACTGAAGGAGAGGGAATTGCAGATGTTATCTTTGGAGATTATAACTTCGAGGGCAAGCTACCGGTGACATGGTTTAAAAGTGTTGAACAGCTCCCATTGGATGTCGGAAGCAACTCATATGACCCTTTATATCCTCTTGGGTTTGGATTGACATGCAATACGGAGAAAGTTATACACCAAGCAGATTTTGATAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

618

Amino Acids

67.89

Weight (kDa)

5.4

Isoelectric Point (pI)

26.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_3 PF00933 30 - 358 8.7e-74 Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C PF01915 395 - 604 1.7e-37 Glycosyl hydrolase family 3 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 602, 1701
Acc36I ACCTGC 1 cut(s) 1323
AccB1I GGYRCC 3 cut(s) 332, 724, 967
AccI GTMKAC 2 cut(s) 327, 1424
AccIII TCCGGA 1 cut(s) 276
AciI CCGC 3 cut(s) 221, 380, 654
AclWI GGATC 3 cut(s) 470, 483, 1161
AcsI RAATTY 1 cut(s) 985
AcuI CTGAAG 1 cut(s) 1683
AdeI CACNNNGTG 1 cut(s) 896
AfaI GTAC 3 cut(s) 658, 1438, 1660
AfeI AGCGCT 1 cut(s) 427
AfiI CCNNNNNNNGG 5 cut(s) 276, 485, 575, 1526, 1570
AflIII ACRYGT 1 cut(s) 957
AgeI ACCGGT 1 cut(s) 1720
AgsI TTSAA 9 cut(s) 56, 94, 419, 835, 887, 983, 1097, 1195, 1745
AjnI CCWGG 3 cut(s) 479, 1037, 1654
AleI CACNNNNGTG 1 cut(s) 1571
Alw26I GTCTC 1 cut(s) 1619
AlwI GGATC 3 cut(s) 470, 483, 1161
AlwNI CAGNNNCTG 1 cut(s) 1553
Ama87I CYCGRG 1 cut(s) 60
Aor13HI TCCGGA 1 cut(s) 276
Aor51HI AGCGCT 1 cut(s) 427
AoxI GGCC 1 cut(s) 197
ApeKI GCWGC 2 cut(s) 1144, 1643
ApoI RAATTY 1 cut(s) 985
AsiGI ACCGGT 1 cut(s) 1720
Asp700I GAANNNNTTC 1 cut(s) 1170
AspLEI GCGC 3 cut(s) 262, 428, 632
AspS9I GGNCC 3 cut(s) 70, 197, 1529
AsuC2I CCSGG 1 cut(s) 271
AsuHPI GGTGA 5 cut(s) 413, 1330, 1481, 1585, 1735
AvaI CYCGRG 1 cut(s) 60
AvaII GGWCC 2 cut(s) 70, 1529
BaeI ACNNNNGTAYC 2 cut(s) 1019, 1052
BamHI GGATCC 1 cut(s) 475
BanI GGYRCC 3 cut(s) 332, 724, 967
BbsI GAAGAC 2 cut(s) 519, 1597
BbvI GCAGC 2 cut(s) 1131, 1630
BccI CCATC 7 cut(s) 644, 872, 1296, 1361, 1423, 1520, 1621
BceAI ACGGC 1 cut(s) 184
BciT130I CCWGG 3 cut(s) 481, 1039, 1656
BcnI CCSGG 1 cut(s) 271
BcoDI GTCTC 1 cut(s) 1619
BfaI CTAG 3 cut(s) 429, 845, 1430
BfmI CTRYAG 1 cut(s) 1602
BfoI RGCGCY 1 cut(s) 429
BfuAI ACCTGC 1 cut(s) 1323
BglII AGATCT 1 cut(s) 1115
BisI GCNGC 2 cut(s) 1145, 1644
BlsI GCNGC 2 cut(s) 1146, 1645
Bme1390I CCNGG 4 cut(s) 271, 481, 1039, 1656
Bme18I GGWCC 2 cut(s) 70, 1529
BmeT110I CYCGRG 1 cut(s) 60
BmgT120I GGNCC 3 cut(s) 70, 197, 1529
BmiI GGNNCC 7 cut(s) 275, 334, 477, 726, 969, 1209, 1531
BmrFI CCNGG 4 cut(s) 271, 481, 1039, 1656
BmrI ACTGGG 2 cut(s) 235, 883
BmsI GCATC 6 cut(s) 292, 367, 482, 779, 1039, 1621
BmuI ACTGGG 2 cut(s) 235, 883
BpiI GAAGAC 2 cut(s) 519, 1597
BpuEI CTTGAG 2 cut(s) 732, 888
BpuMI CCSGG 1 cut(s) 271
BsaAI YACGTR 1 cut(s) 1436
BsaJI CCNNGG 3 cut(s) 310, 479, 574
BsaWI WCCGGW 3 cut(s) 276, 1262, 1720
BsaXI ACNNNNNCTCC 2 cut(s) 436, 466
Bsc4I CCNNNNNNNGG 5 cut(s) 276, 485, 575, 1526, 1570
Bse118I RCCGGY 1 cut(s) 1720
Bse1I ACTGG 4 cut(s) 180, 230, 878, 1260
BseAI TCCGGA 1 cut(s) 276
BseBI CCWGG 3 cut(s) 481, 1039, 1656
BseDI CCNNGG 3 cut(s) 310, 479, 574
BseGI GGATG 7 cut(s) 539, 883, 1000, 1099, 1307, 1636, 1765
BseLI CCNNNNNNNGG 5 cut(s) 276, 485, 575, 1526, 1570
BseMII CTCAG 4 cut(s) 564, 907, 1058, 1560
BseNI ACTGG 4 cut(s) 180, 230, 878, 1260
BseXI GCAGC 2 cut(s) 1131, 1630
BsgI GTGCAG 1 cut(s) 207
BshFI GGCC 1 cut(s) 199
BshNI GGYRCC 3 cut(s) 332, 724, 967
BshTI ACCGGT 1 cut(s) 1720
BsiHKCI CYCGRG 1 cut(s) 60
BsiSI CCGG 4 cut(s) 271, 277, 1263, 1721
BslFI GGGAC 1 cut(s) 501
BslI CCNNNNNNNGG 5 cut(s) 276, 485, 575, 1526, 1570
BsmAI GTCTC 1 cut(s) 1619
BsmFI GGGAC 1 cut(s) 501
BsmI GAATGC 2 cut(s) 1272, 1493
BsnI GGCC 1 cut(s) 199
BsoBI CYCGRG 1 cut(s) 60
Bsp13I TCCGGA 1 cut(s) 276
Bsp143I GATC 5 cut(s) 475, 808, 1115, 1153, 1279
Bsp19I CCATGG 1 cut(s) 310
BspACI CCGC 3 cut(s) 221, 380, 654
BspANI GGCC 1 cut(s) 199
BspCNI CTCAG 4 cut(s) 563, 906, 1059, 1559
BspEI TCCGGA 1 cut(s) 276
BspLI GGNNCC 7 cut(s) 275, 334, 477, 726, 969, 1209, 1531
BspMI ACCTGC 1 cut(s) 1323
BspPI GGATC 3 cut(s) 470, 483, 1161
BspT107I GGYRCC 3 cut(s) 332, 724, 967
BsrFI RCCGGY 1 cut(s) 1720
BsrI ACTGG 4 cut(s) 180, 230, 878, 1260
BssAI RCCGGY 1 cut(s) 1720
BssECI CCNNGG 3 cut(s) 310, 479, 574
BssMI GATC 5 cut(s) 475, 808, 1115, 1153, 1279
BssNAI GTATAC 1 cut(s) 1425
BssT1I CCWWGG 2 cut(s) 310, 574
Bst1107I GTATAC 1 cut(s) 1425
Bst2UI CCWGG 3 cut(s) 481, 1039, 1656
Bst4CI ACNGT 4 cut(s) 10, 332, 1309, 1603
BstAPI GCANNNNNTGC 1 cut(s) 1460
BstBAI YACGTR 1 cut(s) 1436
BstC8I GCNNGC 6 cut(s) 437, 557, 628, 1162, 1272, 1715
BstDEI CTNAG 6 cut(s) 550, 706, 893, 1067, 1314, 1546
BstDSI CCRYGG 1 cut(s) 310
BstEII GGTNACC 2 cut(s) 590, 1258
BstF5I GGATG 7 cut(s) 539, 883, 1000, 1099, 1307, 1636, 1765
BstH2I RGCGCY 1 cut(s) 429
BstHHI GCGC 3 cut(s) 262, 428, 632
BstKTI GATC 5 cut(s) 478, 811, 1118, 1156, 1282
BstMAI GTCTC 1 cut(s) 1619
BstMBI GATC 5 cut(s) 475, 808, 1115, 1153, 1279
BstMWI GCNNNNNNNGC 9 cut(s) 218, 227, 386, 432, 565, 944, 1166, 1460, 1640
BstNI CCWGG 3 cut(s) 481, 1039, 1656
BstNSI RCATGY 7 cut(s) 439, 630, 806, 961, 1164, 1274, 1815
BstPI GGTNACC 2 cut(s) 590, 1258
BstSCI CCNGG 4 cut(s) 269, 479, 1037, 1654
BstSFI CTRYAG 1 cut(s) 1602
BstV1I GCAGC 2 cut(s) 1131, 1630
BstV2I GAAGAC 2 cut(s) 519, 1597
BstX2I RGATCY 3 cut(s) 475, 1115, 1153
BstXI CCANNNNNNTGG 1 cut(s) 766
BstYI RGATCY 3 cut(s) 475, 1115, 1153
BstZ17I GTATAC 1 cut(s) 1425
BsuRI GGCC 1 cut(s) 199
BtgI CCRYGG 1 cut(s) 310
BtsCI GGATG 7 cut(s) 539, 883, 1000, 1099, 1307, 1636, 1765
BtsIMutI CAGTG 4 cut(s) 187, 516, 901, 1298
BveI ACCTGC 1 cut(s) 1323
Cac8I GCNNGC 6 cut(s) 437, 557, 628, 1162, 1272, 1715
CaiI CAGNNNCTG 1 cut(s) 1553
CfoI GCGC 3 cut(s) 262, 428, 632
Cfr10I RCCGGY 1 cut(s) 1720
Cfr13I GGNCC 3 cut(s) 70, 197, 1529
CseI GACGC 2 cut(s) 116, 313
Csp6I GTAC 3 cut(s) 657, 1437, 1659
CspAI ACCGGT 1 cut(s) 1720
CviQI GTAC 3 cut(s) 657, 1437, 1659
DdeI CTNAG 6 cut(s) 550, 706, 893, 1067, 1314, 1546
DpnI GATC 5 cut(s) 477, 810, 1117, 1155, 1281
DpnII GATC 5 cut(s) 475, 808, 1115, 1153, 1279
DraI TTTAAA 1 cut(s) 1735
DraIII CACNNNGTG 1 cut(s) 896
EciI GGCGGA 1 cut(s) 236
Eco130I CCWWGG 2 cut(s) 310, 574
Eco32I GATATC 3 cut(s) 1289, 1444, 1584
Eco47I GGWCC 2 cut(s) 70, 1529
Eco47III AGCGCT 1 cut(s) 427
Eco57I CTGAAG 1 cut(s) 1683
Eco88I CYCGRG 1 cut(s) 60
Eco91I GGTNACC 2 cut(s) 590, 1258
EcoO109I RGGNCCY 1 cut(s) 70
EcoO65I GGTNACC 2 cut(s) 590, 1258
EcoRII CCWGG 3 cut(s) 479, 1037, 1654
EcoRV GATATC 3 cut(s) 1289, 1444, 1584
EcoT14I CCWWGG 2 cut(s) 310, 574
EcoT22I ATGCAT 1 cut(s) 1272
ErhI CCWWGG 2 cut(s) 310, 574
FalI AAGNNNNNCTT 2 cut(s) 1204, 1236
FaqI GGGAC 1 cut(s) 501
FauNDI CATATG 3 cut(s) 720, 1480, 1777
FblI GTMKAC 2 cut(s) 327, 1424
Fnu4HI GCNGC 2 cut(s) 1145, 1644
FokI GGATG 7 cut(s) 526, 890, 1007, 1086, 1314, 1643, 1772
Fsp4HI GCNGC 2 cut(s) 1145, 1644
FspBI CTAG 3 cut(s) 429, 845, 1430
GlaI GCGC 3 cut(s) 261, 427, 631
GluI GCNGC 2 cut(s) 1145, 1644
HaeII RGCGCY 1 cut(s) 429
HaeIII GGCC 1 cut(s) 199
HapII CCGG 4 cut(s) 271, 277, 1263, 1721
HgaI GACGC 2 cut(s) 116, 313
HhaI GCGC 3 cut(s) 262, 428, 632
Hin6I GCGC 3 cut(s) 260, 426, 630
HinP1I GCGC 3 cut(s) 260, 426, 630
HincII GTYRAC 1 cut(s) 241
HindII GTYRAC 1 cut(s) 241
HinfI GANTC 7 cut(s) 63, 280, 715, 1006, 1516, 1560, 1576
HpaII CCGG 4 cut(s) 271, 277, 1263, 1721
HphI GGTGA 5 cut(s) 413, 1330, 1481, 1585, 1735
Hpy166II GTNNAC 5 cut(s) 241, 328, 659, 1338, 1425
Hpy188I TCNGA 6 cut(s) 252, 871, 977, 1111, 1581, 1766
Hpy188III TCNNGA 8 cut(s) 169, 277, 416, 734, 820, 832, 1369, 1587
Hpy8I GTNNAC 5 cut(s) 241, 328, 659, 1338, 1425
Hpy99I CGWCG 1 cut(s) 1423
HpyAV CCTTC 5 cut(s) 153, 202, 1366, 1466, 1658
HpyCH4III ACNGT 4 cut(s) 10, 332, 1309, 1603
HpyCH4IV ACGT 2 cut(s) 1421, 1435
HpyF10VI GCNNNNNNNGC 9 cut(s) 218, 227, 386, 432, 565, 944, 1166, 1460, 1640
HpyF3I CTNAG 6 cut(s) 550, 706, 893, 1067, 1314, 1546
HpySE526I ACGT 2 cut(s) 1421, 1435
HspAI GCGC 3 cut(s) 260, 426, 630
Kpn2I TCCGGA 1 cut(s) 276
Kzo9I GATC 5 cut(s) 475, 808, 1115, 1153, 1279
LmnI GCTCC 5 cut(s) 279, 457, 1207, 1507, 1755
Lsp1109I GCAGC 2 cut(s) 1131, 1630
LweI GCATC 6 cut(s) 292, 367, 482, 779, 1039, 1621
MaeI CTAG 3 cut(s) 429, 845, 1430
MaeII ACGT 2 cut(s) 1421, 1435
MaeIII GTNAC 6 cut(s) 175, 503, 590, 1258, 1309, 1723
MalI GATC 5 cut(s) 477, 810, 1117, 1155, 1281
MboI GATC 5 cut(s) 475, 808, 1115, 1153, 1279
MboII GAAGA 5 cut(s) 524, 621, 1207, 1217, 1602
MfeI CAATTG 1 cut(s) 621
MflI RGATCY 3 cut(s) 475, 1115, 1153
MluCI AATT 8 cut(s) 22, 522, 621, 858, 951, 985, 1398, 1674
MlyI GAGTC 1 cut(s) 72
MmeI TCCRAC 3 cut(s) 625, 1360, 1744
Mph1103I ATGCAT 1 cut(s) 1272
MroI TCCGGA 1 cut(s) 276
MroXI GAANNNNTTC 1 cut(s) 1170
MseI TTAA 7 cut(s) 12, 20, 153, 852, 1325, 1598, 1734
MslI CAYNNNNRTG 6 cut(s) 585, 666, 764, 962, 1275, 1571
MspA1I CMGCKG 1 cut(s) 783
MspI CCGG 4 cut(s) 271, 277, 1263, 1721
MspR9I CCNGG 4 cut(s) 271, 481, 1039, 1656
MunI CAATTG 1 cut(s) 621
Mva1269I GAATGC 2 cut(s) 1272, 1493
MvaI CCWGG 3 cut(s) 481, 1039, 1656
MwoI GCNNNNNNNGC 9 cut(s) 218, 227, 386, 432, 565, 944, 1166, 1460, 1640
NciI CCSGG 1 cut(s) 271
NcoI CCATGG 1 cut(s) 310
NdeI CATATG 3 cut(s) 720, 1480, 1777
NdeII GATC 5 cut(s) 475, 808, 1115, 1153, 1279
NlaIV GGNNCC 7 cut(s) 275, 334, 477, 726, 969, 1209, 1531
NmuCI GTSAC 1 cut(s) 1723
NsiI ATGCAT 1 cut(s) 1272
NspI RCATGY 7 cut(s) 439, 630, 806, 961, 1164, 1274, 1815
OliI CACNNNNGTG 1 cut(s) 1571
PaeI GCATGC 4 cut(s) 439, 630, 1164, 1274
PaeR7I CTCGAG 1 cut(s) 60
PciI ACATGT 1 cut(s) 957
PctI GAATGC 2 cut(s) 1272, 1493
PdmI GAANNNNTTC 1 cut(s) 1170
PfeI GAWTC 6 cut(s) 280, 715, 1006, 1516, 1560, 1576
PfoI TCCNGGA 1 cut(s) 1037
PinAI ACCGGT 1 cut(s) 1720
PkrI GCNGC 2 cut(s) 1146, 1645
PleI GAGTC 1 cut(s) 71
PpsI GAGTC 1 cut(s) 71
Ppu21I YACGTR 1 cut(s) 1436
PpuMI RGGWCCY 1 cut(s) 70
PscI ACATGT 1 cut(s) 957
PsiI TTATAA 2 cut(s) 602, 1701
Psp5II RGGWCCY 1 cut(s) 70
Psp6I CCWGG 3 cut(s) 479, 1037, 1654
PspEI GGTNACC 2 cut(s) 590, 1258
PspGI CCWGG 3 cut(s) 479, 1037, 1654
PspN4I GGNNCC 7 cut(s) 275, 334, 477, 726, 969, 1209, 1531
PspPI GGNCC 3 cut(s) 70, 197, 1529
PspPPI RGGWCCY 1 cut(s) 70
PspXI VCTCGAGB 1 cut(s) 60
PstNI CAGNNNCTG 1 cut(s) 1553
PsuI RGATCY 3 cut(s) 475, 1115, 1153
PvuII CAGCTG 1 cut(s) 783
RsaI GTAC 3 cut(s) 658, 1438, 1660
RsaNI GTAC 3 cut(s) 657, 1437, 1659
RseI CAYNNNNRTG 6 cut(s) 585, 666, 764, 962, 1275, 1571
SaqAI TTAA 7 cut(s) 12, 20, 153, 852, 1325, 1598, 1734
SatI GCNGC 2 cut(s) 1145, 1644
Sau3AI GATC 5 cut(s) 475, 808, 1115, 1153, 1279
Sau96I GGNCC 3 cut(s) 70, 197, 1529
SchI GAGTC 1 cut(s) 72
ScrFI CCNGG 4 cut(s) 271, 481, 1039, 1656
SfaNI GCATC 6 cut(s) 292, 367, 482, 779, 1039, 1621
SfcI CTRYAG 1 cut(s) 1602
Sfr274I CTCGAG 1 cut(s) 60
SinI GGWCC 2 cut(s) 70, 1529
SlaI CTCGAG 1 cut(s) 60
SmiMI CAYNNNNRTG 6 cut(s) 585, 666, 764, 962, 1275, 1571
SmlI CTYRAG 3 cut(s) 60, 747, 903
SmoI CTYRAG 3 cut(s) 60, 747, 903
SphI GCATGC 4 cut(s) 439, 630, 1164, 1274
Sse9I AATT 8 cut(s) 22, 522, 621, 858, 951, 985, 1398, 1674
SsiI CCGC 3 cut(s) 221, 380, 654
SspMI CTAG 3 cut(s) 429, 845, 1430
StyD4I CCNGG 4 cut(s) 269, 479, 1037, 1654
StyI CCWWGG 2 cut(s) 310, 574
TaaI ACNGT 4 cut(s) 10, 332, 1309, 1603
TaiI ACGT 2 cut(s) 1424, 1438
TaqI TCGA 3 cut(s) 61, 1418, 1707
TasI AATT 8 cut(s) 22, 522, 621, 858, 951, 985, 1398, 1674
TfiI GAWTC 6 cut(s) 280, 715, 1006, 1516, 1560, 1576
Tru1I TTAA 7 cut(s) 12, 20, 153, 852, 1325, 1598, 1734
Tru9I TTAA 7 cut(s) 12, 20, 153, 852, 1325, 1598, 1734
TscAI CASTG 4 cut(s) 187, 523, 901, 1298
TseFI GTSAC 1 cut(s) 1723
TseI GCWGC 2 cut(s) 1144, 1643
Tsp45I GTSAC 1 cut(s) 1723
TspDTI ATGAA 3 cut(s) 597, 707, 1467
TspGWI ACGGA 1 cut(s) 1835
TspRI CASTG 4 cut(s) 187, 523, 901, 1298
VpaK11BI GGWCC 2 cut(s) 70, 1529
XapI RAATTY 1 cut(s) 985
XceI RCATGY 7 cut(s) 439, 630, 806, 961, 1164, 1274, 1815
XcmI CCANNNNNNNNNTGG 1 cut(s) 1252
XhoI CTCGAG 1 cut(s) 60
XmiI GTMKAC 2 cut(s) 327, 1424
XmnI GAANNNNTTC 1 cut(s) 1170
XspI CTAG 3 cut(s) 429, 845, 1430
Zsp2I ATGCAT 1 cut(s) 1272
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.