FvH4_6g40760

Leucine rich repeat N-terminal domain

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
32189304 .. 32192357
3054 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g40760.t1

Sequence Viewer

Length: 3054 bp
ATGGGAATGGGATTGCCAAGTTGTTACTTGTATGCTGTGCAATGCCTTATCTTTCTGTTGCTCTTTCTGTTGCTCAATGCTTCCCAATGTGCTTCATTTGTGCAGACAATTGGTCATGCAGATGAGTGTTCTGCCTTGATCCAGTTCAACCAAAGCTTTACAACAAGCAAGTCTGCATCTTTAGATCCTTTCGCTTATCCGAAGGTTGCATCATGGACGCAAGAAGGGGCGAGGAGCAATTGCTGCTCATGGGATGGTGTGGAGTGCAATGAGGACACTGGCCATGTTATTGGCCTCAACCTCAACAGCAGCTGCCTCTATGGTTCTCTCAACTCCAGCAGCAGCCTTTTCCAGCTTGTTCACTTGCAAAGGCTAGACCTTTCGGATAATCACTTCAACTTCTCAGAAATACCTTCAAGATTAGGCCATGATCTTACCAGTCTAACATTTCTGAACCTTTCTCAGTCTTCATTTTCTGGCCAAATTCCATCAGAAATTTCATACCTTTCCAAGCTGTCTACTCTTGATCTTTCTGCTACTAGCTATTTGGATCTGACATTTGATTATGATCATTTTTCATCTTACAAGATTTTGGAACTGACACATGCCAACCTCAGAAGTATAGTTCAAAATCTAACCAACATAAAAGAACTTCATCTTAATAAGGTACACATACCCTCCACTCTACCCGGTATCTTTGCAAATGCAACTTCTCTCAAATCTCTCTATCTTCAAAGCTGTGGTTTGTCTGGAGAATTTCCAGTAGGCATTTTTCAGCTACCAAACTTGGAAGTTCTTGATTTGACATATAACGAAGACTTAACCGGTTTCTTTCCTGAATTTAACAAGACTAGTCCCTTCAAGAAACTGAATGTTGCAAGGACAAATTTCTCTGGTCATATACCTGCTTCAATTGGAGACCTAAGCTCCTTAGAGTACTTGAACCTTGCATTGTGTAATTTTTATCCTTATGTTCCATCTTCACTCGGAAACCTTACACAGCTCAGTTACCTTAGCCTTTCTTTCTTTTTCTATCACAGTTATACTTACTTCGATGTTTCAAGAAACAGTTTCAGTGGCCAAATTTCTGAGTCCTGGTCTTGGGTTGGAAAGTTAACCAAACTCTACCACTTGAGCCTTGCCTATACCTACTTAGAAGGAGAGTTCCCGAGTTTTGTTGCTAACCTGACTCAGATTCAAGAGTTAGACTTGGCCTATAACCAAATCACAGGTGAAATCCCATCTTGGCTTGTCAACCTGACCAAACTAACTGCTCCATACTTCCCATTCAACAATCTGCAAGGAGCAATTCCAAGGTCATTTTTCCAGCTTACAAACCTTCAGTATATCGACTTGTCCTCGAATAACTTGAGTGGAACTGTTGCGTTGGAAGAATTTTTCAAGCTCAAAATGTTAACAGTGCTGCGACTTTCGTTCAGCAAATTATCTGTGCACATCAAAACTGGTTTGGCTGCTACTTCTCCAAAGTTTGTTGCTCTAGCATTGGGGTCATGCAACTTAACAGAGTTTCCAGATTTTTTACATGATAATAGTAAATTGGTGGAGCTAGACCTTTCTGATAACAACATTCATGGCCAAATACCAAGATGGCTGTGGAACTCAACTGGTGAATCTCTGTGGTATTTGAACCTCTCTCACAACTCTCTGACAGGATTTGAGCAAAATCCTGTCAATCTTCCATGGAAGAATCTGCATCTTTTAGAGCTTGGATCCAACAGGTTACAAGGGCCATTGCTGATTCCCCCACTGTCGGTTGAATTTTATTCTGTGCCAAACAATGGTTATACTGGAGGGATTTCAGCATCTTTTTGCAACTTGAAAGATCTGTTTATTCTTGATTTTTCCAACAACAACCTAAGTGGCATGCTTCCACAATGTTTAGGGAACTCTACTGCATTCGAAATTCTGAAGCTCCGCAACAATTCTTTTCATGGTGATATTCCTGATCAAATGTGTCCAACCGGAAACAGTTCACTAAAGATGGTTGATATGAGTTATAATCAGCTACAGGGTAAGCTACCAAGATCAATGGCAAAATGCACTCGGTTAGAGTTTCTTGATTTCGGAAACAATCACATTAGTGACAGCTTCCCATCATGGTTAGGAGAACTTCCTGTACTAAGGGTATTCATTCTGGGGACTAATGGATTTCATGGCACTATTGGCAAACCTGCAACTAACCATGAATTCCCAAACCTTTGCGTTATTGACCTATCCAACAATGGTTTCTCAAGTTCGTTGCCTTCTGATTACTTAGAGAGCTGGAATTGCATGAAAAAATCTGTTGATGAAGTGAAGACATATTTTCAAGACACCATAATGGTCGCCACATACACAATTCACCAGTATGATTACTCAATGACCATTTTCGGCAAAGGTGTAGAGTTGAAGTATTTGAAGACACCTTATCTTCTCTGGTTTATAGATTTCTCAAGTAATAGATTTGAAGGCGCCATTCCTGGTGCTATTGGGAATCTCACAGGGCTTCATTTGCTTAATCTTTCCAACAACACTCTCAATGGTCACATCCCCTCATCTTTGGGGAAATTGTCTGCTCTTGAATCCTTGGATCTCTCTCAAAATCAACTCTCAGGAGAGATCCCCGGCAATTTAGCCGAACTCACTTTCCTTGCATACTTCAATGTATCCCAAAATCACCTTTCAGGCCCTATCCCACATGGACAACAATTTGGTACATTCCAAGAGGAACTGTACGAAGGAAACTCAGGTTTGTGTGGAGAGCCTTTGTTAAAGAAATGTGAAGGTTCTGATAGCTCAATGCAGCCACCTTCGATGACCGAAGAAGACGATGAATCTGGGATTCAGGTTGAATTAGATTGGTTTGTGGTTCTGCCGGGAGTTGTAAGTGGGCTAGTAGTTGGAGTGGTTGCTGGAAACACTTTGGGAAACAAGAAACATGAATGGTTTGCAAAGACGTTTGACTATAGGAGGAGGTCTCAAGTGAGGTGGCAGCCGATACGGATGACAATTAGAGGCAGACGTAGGATTGAAAGTACGAACGAGTCGTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1018

Amino Acids

113.43

Weight (kDa)

5.44

Isoelectric Point (pI)

40.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 104 - 219 4.5e-06 Leucine-rich repeat region
LRR_14 PF23598 366 - 552 5.1e-11 Leucine-rich repeat region
LRR_8 PF13855 430 - 482 1.7e-06 Leucine rich repeat
LRR_8 PF13855 818 - 870 4e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2019
Acc36I ACCTGC 2 cut(s) 913, 2200
AccB1I GGYRCC 1 cut(s) 2471
AccB7I CCANNNNNTGG 1 cut(s) 1799
AccI GTMKAC 1 cut(s) 518
AciI CCGC 1 cut(s) 1936
AclWI GGATC 7 cut(s) 133, 179, 558, 1725, 1738, 2598, 2614
AcoI YGGCCR 4 cut(s) 280, 478, 1078, 1594
AcuI CTGAAG 2 cut(s) 1325, 1949
AcyI GRCGYC 1 cut(s) 2472
AfaI GTAC 6 cut(s) 669, 938, 2139, 2716, 2735, 3037
AfiI CCNNNNNNNGG 3 cut(s) 1101, 1771, 1799
AgeI ACCGGT 1 cut(s) 824
AhdI GACNNNNNGTC 1 cut(s) 111
AhlI ACTAGT 1 cut(s) 851
AjnI CCWGG 2 cut(s) 1094, 2479
AjuI GAANNNNNNNTTGG 2 cut(s) 2231, 2263
AleI CACNNNNGTG 1 cut(s) 2100
AloI GAACNNNNNNTCC 2 cut(s) 2631, 2663
Alw21I GWGCWC 1 cut(s) 1455
Alw26I GTCTC 2 cut(s) 912, 2982
Alw44I GTGCAC 1 cut(s) 1451
AlwI GGATC 7 cut(s) 133, 179, 558, 1725, 1738, 2598, 2614
AlwNI CAGNNNCTG 1 cut(s) 312
Ama87I CYCGRG 1 cut(s) 1168
AoxI GGCC 9 cut(s) 280, 292, 424, 478, 1078, 1212, 1594, 1748, 2686
ApaLI GTGCAC 1 cut(s) 1451
ApeKI GCWGC 9 cut(s) 243, 309, 312, 339, 342, 1423, 1472, 2803, 2992
AsiGI ACCGGT 1 cut(s) 824
Asp700I GAANNNNTTC 1 cut(s) 1990
AspLEI GCGC 1 cut(s) 2474
AspS9I GGNCC 2 cut(s) 1748, 2687
AsuC2I CCSGG 3 cut(s) 690, 2625, 2877
AsuHPI GGTGA 5 cut(s) 1244, 1640, 1967, 2354, 2669
AsuII TTCGAA 1 cut(s) 1920
AvaI CYCGRG 1 cut(s) 1168
BaeGI GKGCMC 1 cut(s) 1455
BalI TGGCCA 4 cut(s) 282, 480, 1080, 1596
BamHI GGATCC 1 cut(s) 1730
BanI GGYRCC 1 cut(s) 2471
BbsI GAAGAC 5 cut(s) 459, 822, 2324, 2426, 2832
Bbv12I GWGCWC 1 cut(s) 1455
BbvI GCAGC 9 cut(s) 230, 299, 321, 351, 354, 1410, 1459, 2815, 3004
BccI CCATC 7 cut(s) 248, 496, 985, 1249, 1602, 1996, 2122
BciT130I CCWGG 2 cut(s) 1096, 2481
BciVI GTATCC 1 cut(s) 2677
BclI TGATCA 2 cut(s) 568, 1966
BcnI CCSGG 3 cut(s) 690, 2625, 2877
BcoDI GTCTC 2 cut(s) 912, 2982
BcuI ACTAGT 1 cut(s) 851
BfaI CTAG 7 cut(s) 374, 540, 852, 1499, 1568, 2894, 3052
BfmI CTRYAG 2 cut(s) 2027, 2965
BfoI RGCGCY 1 cut(s) 2475
BfuAI ACCTGC 2 cut(s) 913, 2200
BfuI GTATCC 1 cut(s) 2677
BglII AGATCT 1 cut(s) 1843
BisI GCNGC 9 cut(s) 244, 310, 313, 340, 343, 1424, 1473, 2804, 2993
BlsI GCNGC 9 cut(s) 245, 311, 314, 341, 344, 1425, 1474, 2805, 2994
BmcAI AGTACT 1 cut(s) 938
Bme1390I CCNGG 5 cut(s) 690, 1096, 2481, 2625, 2877
BmeRI GACNNNNNGTC 1 cut(s) 111
BmeT110I CYCGRG 1 cut(s) 1168
BmgT120I GGNCC 2 cut(s) 1748, 2687
BmiI GGNNCC 2 cut(s) 1732, 2473
BmrFI CCNGG 5 cut(s) 690, 1096, 2481, 2625, 2877
BmsI GCATC 4 cut(s) 185, 218, 1723, 1832
BpiI GAAGAC 5 cut(s) 459, 822, 2324, 2426, 2832
BplI GAGNNNNNCTC 2 cut(s) 2962, 2994
BpmI CTGGAG 3 cut(s) 319, 771, 1830
Bpu10I CCTNAGC 2 cut(s) 923, 1013
Bpu14I TTCGAA 1 cut(s) 1920
BpuEI CTTGAG 5 cut(s) 1153, 1390, 2236, 2437, 2964
BpuMI CCSGG 3 cut(s) 690, 2625, 2877
BsaBI GATNNNNATC 1 cut(s) 567
BsaHI GRCGYC 1 cut(s) 2472
BsaI GGTCTC 2 cut(s) 912, 2982
BsaJI CCNNGG 4 cut(s) 1313, 1700, 2586, 2623
BsaWI WCCGGW 2 cut(s) 824, 1982
BsaXI ACNNNNNCTCC 4 cut(s) 662, 692, 911, 941
Bsc4I CCNNNNNNNGG 3 cut(s) 1101, 1771, 1799
Bse118I RCCGGY 1 cut(s) 824
Bse1I ACTGG 8 cut(s) 142, 283, 438, 761, 1468, 1630, 1813, 2365
Bse3DI GCAATG 3 cut(s) 47, 274, 1751
Bse8I GATNNNNATC 1 cut(s) 567
BseBI CCWGG 2 cut(s) 1096, 2481
BseDI CCNNGG 4 cut(s) 1313, 1700, 2586, 2623
BseGI GGATG 3 cut(s) 259, 2547, 3009
BseJI GATNNNNATC 1 cut(s) 567
BseLI CCNNNNNNNGG 3 cut(s) 1101, 1771, 1799
BseMI GCAATG 3 cut(s) 47, 274, 1751
BseMII CTCAG 8 cut(s) 417, 476, 628, 1018, 1080, 1205, 2625, 2760
BseNI ACTGG 8 cut(s) 142, 283, 438, 761, 1468, 1630, 1813, 2365
BseRI GAGGAG 2 cut(s) 247, 2986
BseSI GKGCMC 1 cut(s) 1455
BseXI GCAGC 9 cut(s) 230, 299, 321, 351, 354, 1410, 1459, 2815, 3004
BsgI GTGCAG 1 cut(s) 122
BshFI GGCC 9 cut(s) 282, 294, 426, 480, 1080, 1214, 1596, 1750, 2688
BshNI GGYRCC 1 cut(s) 2471
BshTI ACCGGT 1 cut(s) 824
BsiHKAI GWGCWC 1 cut(s) 1455
BsiHKCI CYCGRG 1 cut(s) 1168
BsiSI CCGG 5 cut(s) 690, 825, 1983, 2625, 2876
BslFI GGGAC 2 cut(s) 840, 2173
BslI CCNNNNNNNGG 3 cut(s) 1101, 1771, 1799
BsmAI GTCTC 2 cut(s) 912, 2982
BsmFI GGGAC 2 cut(s) 840, 2173
BsmI GAATGC 1 cut(s) 1916
BsnI GGCC 9 cut(s) 282, 294, 426, 480, 1080, 1214, 1596, 1750, 2688
Bso31I GGTCTC 2 cut(s) 912, 2982
BsoBI CYCGRG 1 cut(s) 1168
Bsp119I TTCGAA 1 cut(s) 1920
Bsp1286I GDGCHC 1 cut(s) 1455
Bsp19I CCATGG 1 cut(s) 1700
BspACI CCGC 1 cut(s) 1936
BspANI GGCC 9 cut(s) 282, 294, 426, 480, 1080, 1214, 1596, 1750, 2688
BspCNI CTCAG 8 cut(s) 416, 475, 627, 1017, 1081, 1204, 2624, 2759
BspLI GGNNCC 2 cut(s) 1732, 2473
BspMI ACCTGC 2 cut(s) 913, 2200
BspPI GGATC 7 cut(s) 133, 179, 558, 1725, 1738, 2598, 2614
BspT104I TTCGAA 1 cut(s) 1920
BspT107I GGYRCC 1 cut(s) 2471
BspTNI GGTCTC 2 cut(s) 912, 2982
BsrDI GCAATG 3 cut(s) 47, 274, 1751
BsrFI RCCGGY 1 cut(s) 824
BsrI ACTGG 8 cut(s) 142, 283, 438, 761, 1468, 1630, 1813, 2365
BssAI RCCGGY 1 cut(s) 824
BssECI CCNNGG 4 cut(s) 1313, 1700, 2586, 2623
BssNI GRCGYC 1 cut(s) 2472
BssT1I CCWWGG 3 cut(s) 1313, 1700, 2586
Bst2UI CCWGG 2 cut(s) 1096, 2481
Bst4CI ACNGT 7 cut(s) 1040, 1070, 1381, 1420, 1770, 1991, 2733
BstACI GRCGYC 1 cut(s) 2472
BstAPI GCANNNNNTGC 1 cut(s) 243
BstBI TTCGAA 1 cut(s) 1920
BstC8I GCNNGC 1 cut(s) 1886
BstDSI CCRYGG 1 cut(s) 1700
BstF5I GGATG 3 cut(s) 259, 2547, 3009
BstH2I RGCGCY 1 cut(s) 2475
BstHHI GCGC 1 cut(s) 2474
BstMAI GTCTC 2 cut(s) 912, 2982
BstMWI GCNNNNNNNGC 4 cut(s) 243, 2184, 2289, 2512
BstNI CCWGG 2 cut(s) 1096, 2481
BstNSI RCATGY 2 cut(s) 608, 1888
BstSCI CCNGG 5 cut(s) 688, 1094, 2479, 2623, 2875
BstSFI CTRYAG 2 cut(s) 2027, 2965
BstSLI GKGCMC 1 cut(s) 1455
BstV1I GCAGC 9 cut(s) 230, 299, 321, 351, 354, 1410, 1459, 2815, 3004
BstV2I GAAGAC 5 cut(s) 459, 822, 2324, 2426, 2832
BstX2I RGATCY 6 cut(s) 184, 550, 1730, 1843, 2590, 2619
BstXI CCANNNNNNTGG 1 cut(s) 290
BstYI RGATCY 6 cut(s) 184, 550, 1730, 1843, 2590, 2619
BsuI GTATCC 1 cut(s) 2677
BsuRI GGCC 9 cut(s) 282, 294, 426, 480, 1080, 1214, 1596, 1750, 2688
BtgI CCRYGG 1 cut(s) 1700
BtsCI GGATG 3 cut(s) 259, 2547, 3009
BtsIMutI CAGTG 4 cut(s) 276, 1081, 1425, 1766
BveI ACCTGC 2 cut(s) 913, 2200
Cac8I GCNNGC 1 cut(s) 1886
CaiI CAGNNNCTG 1 cut(s) 312
CfoI GCGC 1 cut(s) 2474
Cfr10I RCCGGY 1 cut(s) 824
Cfr13I GGNCC 2 cut(s) 1748, 2687
CseI GACGC 1 cut(s) 226
Csp6I GTAC 6 cut(s) 668, 937, 2138, 2715, 2734, 3036
CspAI ACCGGT 1 cut(s) 824
CspCI CAANNNNNGTGG 4 cut(s) 1861, 1896, 2969, 3004
CviQI GTAC 6 cut(s) 668, 937, 2138, 2715, 2734, 3036
DinI GGCGCC 1 cut(s) 2473
DriI GACNNNNNGTC 1 cut(s) 111
EaeI YGGCCR 4 cut(s) 280, 478, 1078, 1594
Eam1105I GACNNNNNGTC 1 cut(s) 111
Eco130I CCWWGG 3 cut(s) 1313, 1700, 2586
Eco31I GGTCTC 2 cut(s) 912, 2982
Eco57I CTGAAG 2 cut(s) 1325, 1949
Eco88I CYCGRG 1 cut(s) 1168
EcoO109I RGGNCCY 1 cut(s) 2687
EcoRI GAATTC 1 cut(s) 2207
EcoRII CCWGG 2 cut(s) 1094, 2479
EcoT14I CCWWGG 3 cut(s) 1313, 1700, 2586
EgeI GGCGCC 1 cut(s) 2473
EheI GGCGCC 1 cut(s) 2473
ErhI CCWWGG 3 cut(s) 1313, 1700, 2586
FaqI GGGAC 2 cut(s) 840, 2173
FbaI TGATCA 2 cut(s) 568, 1966
FblI GTMKAC 1 cut(s) 518
Fnu4HI GCNGC 9 cut(s) 244, 310, 313, 340, 343, 1424, 1473, 2804, 2993
FokI GGATG 3 cut(s) 266, 2534, 3016
Fsp4HI GCNGC 9 cut(s) 244, 310, 313, 340, 343, 1424, 1473, 2804, 2993
FspBI CTAG 7 cut(s) 374, 540, 852, 1499, 1568, 2894, 3052
GlaI GCGC 1 cut(s) 2473
GluI GCNGC 9 cut(s) 244, 310, 313, 340, 343, 1424, 1473, 2804, 2993
GsuI CTGGAG 3 cut(s) 319, 771, 1830
HaeII RGCGCY 1 cut(s) 2475
HaeIII GGCC 9 cut(s) 282, 294, 426, 480, 1080, 1214, 1596, 1750, 2688
HapII CCGG 5 cut(s) 690, 825, 1983, 2625, 2876
HgaI GACGC 1 cut(s) 226
HhaI GCGC 1 cut(s) 2474
Hin1I GRCGYC 1 cut(s) 2472
Hin6I GCGC 1 cut(s) 2472
HinP1I GCGC 1 cut(s) 2472
HincII GTYRAC 3 cut(s) 1116, 1255, 1416
HindII GTYRAC 3 cut(s) 1116, 1255, 1416
HindIII AAGCTT 1 cut(s) 154
HpaI GTTAAC 2 cut(s) 1116, 1416
HpaII CCGG 5 cut(s) 690, 825, 1983, 2625, 2876
HphI GGTGA 5 cut(s) 1244, 1640, 1967, 2354, 2669
Hpy166II GTNNAC 8 cut(s) 361, 519, 670, 1116, 1255, 1416, 1453, 1994
Hpy8I GTNNAC 8 cut(s) 361, 519, 670, 1116, 1255, 1416, 1453, 1994
HpyCH4III ACNGT 7 cut(s) 1040, 1070, 1381, 1420, 1770, 1991, 2733
HpyCH4IV ACGT 2 cut(s) 2957, 3022
HpyF10VI GCNNNNNNNGC 4 cut(s) 243, 2184, 2289, 2512
HpySE526I ACGT 2 cut(s) 2957, 3022
Hsp92I GRCGYC 1 cut(s) 2472
HspAI GCGC 1 cut(s) 2472
KasI GGCGCC 1 cut(s) 2471
Ksp22I TGATCA 2 cut(s) 568, 1966
KspAI GTTAAC 2 cut(s) 1116, 1416
LmnI GCTCC 6 cut(s) 234, 932, 1279, 1304, 1564, 1938
Lsp1109I GCAGC 9 cut(s) 230, 299, 321, 351, 354, 1410, 1459, 2815, 3004
LweI GCATC 4 cut(s) 185, 218, 1723, 1832
MaeI CTAG 7 cut(s) 374, 540, 852, 1499, 1568, 2894, 3052
MaeII ACGT 2 cut(s) 2957, 3022
MaeIII GTNAC 5 cut(s) 23, 1007, 1740, 2102, 2543
MfeI CAATTG 3 cut(s) 108, 238, 912
MflI RGATCY 6 cut(s) 184, 550, 1730, 1843, 2590, 2619
MhlI GDGCHC 1 cut(s) 1455
MlsI TGGCCA 4 cut(s) 282, 480, 1080, 1596
MluNI TGGCCA 4 cut(s) 282, 480, 1080, 1596
Mly113I GGCGCC 1 cut(s) 2472
MlyI GAGTC 3 cut(s) 1100, 1183, 3053
MmeI TCCRAC 8 cut(s) 1087, 1368, 1758, 1890, 2003, 2262, 2550, 2881
Mox20I TGGCCA 4 cut(s) 282, 480, 1080, 1596
MroXI GAANNNNTTC 1 cut(s) 1990
MscI TGGCCA 4 cut(s) 282, 480, 1080, 1596
MseI TTAA 8 cut(s) 660, 821, 843, 1115, 1415, 1520, 2517, 2771
MslI CAYNNNNRTG 4 cut(s) 120, 2100, 2339, 2367
Msp20I TGGCCA 4 cut(s) 282, 480, 1080, 1596
MspA1I CMGCKG 1 cut(s) 312
MspI CCGG 5 cut(s) 690, 825, 1983, 2625, 2876
MspR9I CCNGG 5 cut(s) 690, 1096, 2481, 2625, 2877
MunI CAATTG 3 cut(s) 108, 238, 912
Mva1269I GAATGC 1 cut(s) 1916
MvaI CCWGG 2 cut(s) 1096, 2481
MwoI GCNNNNNNNGC 4 cut(s) 243, 2184, 2289, 2512
NarI GGCGCC 1 cut(s) 2472
NciI CCSGG 3 cut(s) 690, 2625, 2877
NcoI CCATGG 1 cut(s) 1700
NlaIV GGNNCC 2 cut(s) 1732, 2473
NmuCI GTSAC 2 cut(s) 2102, 2543
NspI RCATGY 2 cut(s) 608, 1888
NspV TTCGAA 1 cut(s) 1920
OliI CACNNNNGTG 1 cut(s) 2100
PaeI GCATGC 1 cut(s) 1888
PcsI WCGNNNNNNNCGW 1 cut(s) 3044
PctI GAATGC 1 cut(s) 1916
PdmI GAANNNNTTC 1 cut(s) 1990
PfeI GAWTC 8 cut(s) 1195, 1631, 1708, 1759, 2494, 2582, 2834, 2842
PflMI CCANNNNNTGG 1 cut(s) 1799
PinAI ACCGGT 1 cut(s) 824
PkrI GCNGC 9 cut(s) 245, 311, 314, 341, 344, 1425, 1474, 2805, 2994
PleI GAGTC 3 cut(s) 1099, 1183, 3052
PluTI GGCGCC 1 cut(s) 2475
PpsI GAGTC 3 cut(s) 1099, 1183, 3052
PsiI TTATAA 1 cut(s) 2019
Psp6I CCWGG 2 cut(s) 1094, 2479
PspGI CCWGG 2 cut(s) 1094, 2479
PspN4I GGNNCC 2 cut(s) 1732, 2473
PspPI GGNCC 2 cut(s) 1748, 2687
PsrI GAACNNNNNNTAC 2 cut(s) 2121, 2153
PstNI CAGNNNCTG 1 cut(s) 312
PsuI RGATCY 6 cut(s) 184, 550, 1730, 1843, 2590, 2619
PvuII CAGCTG 1 cut(s) 312
RsaI GTAC 6 cut(s) 669, 938, 2139, 2716, 2735, 3037
RsaNI GTAC 6 cut(s) 668, 937, 2138, 2715, 2734, 3036
RseI CAYNNNNRTG 4 cut(s) 120, 2100, 2339, 2367
SaqAI TTAA 8 cut(s) 660, 821, 843, 1115, 1415, 1520, 2517, 2771
SatI GCNGC 9 cut(s) 244, 310, 313, 340, 343, 1424, 1473, 2804, 2993
Sau96I GGNCC 2 cut(s) 1748, 2687
ScaI AGTACT 1 cut(s) 938
SchI GAGTC 3 cut(s) 1100, 1183, 3053
ScrFI CCNGG 5 cut(s) 690, 1096, 2481, 2625, 2877
SduI GDGCHC 1 cut(s) 1455
SfaNI GCATC 4 cut(s) 185, 218, 1723, 1832
SfcI CTRYAG 2 cut(s) 2027, 2965
SfoI GGCGCC 1 cut(s) 2473
SfuI TTCGAA 1 cut(s) 1920
SmiMI CAYNNNNRTG 4 cut(s) 120, 2100, 2339, 2367
SmlI CTYRAG 5 cut(s) 1132, 1369, 2251, 2452, 2979
SmoI CTYRAG 5 cut(s) 1132, 1369, 2251, 2452, 2979
SpeI ACTAGT 1 cut(s) 851
SphI GCATGC 1 cut(s) 1888
SsiI CCGC 1 cut(s) 1936
SspDI GGCGCC 1 cut(s) 2471
SspMI CTAG 7 cut(s) 374, 540, 852, 1499, 1568, 2894, 3052
StyD4I CCNGG 5 cut(s) 688, 1094, 2479, 2623, 2875
StyI CCWWGG 3 cut(s) 1313, 1700, 2586
TaaI ACNGT 7 cut(s) 1040, 1070, 1381, 1420, 1770, 1991, 2733
TaiI ACGT 2 cut(s) 2960, 3025
TaqI TCGA 5 cut(s) 1053, 1350, 1361, 1920, 2813
TaqII GACCGA 1 cut(s) 2834
TatI WGTACW 2 cut(s) 936, 2137
TfiI GAWTC 8 cut(s) 1195, 1631, 1708, 1759, 2494, 2582, 2834, 2842
Tru1I TTAA 8 cut(s) 660, 821, 843, 1115, 1415, 1520, 2517, 2771
Tru9I TTAA 8 cut(s) 660, 821, 843, 1115, 1415, 1520, 2517, 2771
TscAI CASTG 4 cut(s) 283, 1081, 1425, 1773
TseFI GTSAC 2 cut(s) 2102, 2543
TseI GCWGC 9 cut(s) 243, 309, 312, 339, 342, 1423, 1472, 2803, 2992
Tsp45I GTSAC 2 cut(s) 2102, 2543
TspGWI ACGGA 1 cut(s) 3016
TspRI CASTG 4 cut(s) 283, 1081, 1425, 1773
Van91I CCANNNNNTGG 1 cut(s) 1799
VneI GTGCAC 1 cut(s) 1451
XceI RCATGY 2 cut(s) 608, 1888
XcmI CCANNNNNNNNNTGG 1 cut(s) 1611
XmiI GTMKAC 1 cut(s) 518
XmnI GAANNNNTTC 1 cut(s) 1990
XspI CTAG 7 cut(s) 374, 540, 852, 1499, 1568, 2894, 3052
ZrmI AGTACT 1 cut(s) 938
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.