Rw1G031060

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000024
Physical Location & Seq
Reverse (-)
59143450 .. 59146569
3120 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G031060.1

Sequence Viewer

Length: 2817 bp
ATGTTTCGATTGCTAATTGATCTTGATACTACGTACACTTTGCGGCAGCTATCTTATTGTCATGATGAGGAGAGCTCTGCCTTGCTACAATTCAAGCAAAGCTTTACTATCAATGCATCTGCTTCGGGTTTAGAGGGTGCTTATCCGAAAGTGTTGTCCTGGAAACAAGCTCAAGGAGGAAACAACACCAGCTGCTGCACATGGGATGGGGTCGAGTGTGACGAACACACGGGTCATGTGATCGGGCTTGATCTCAGAAGCAGTTGTCTCTACGGCTCTATTCACTCCAACAGCTCCCTCTTCCGTCTTGTTCACCTTCAGAGGCTGGACCTTGCCGATAATCACTTCAATTACTCTCAAATTCCTACTAGCATTAGGAATTTTCCAAGGCTCACCCATCTCGACCTCTCTGCCTCTGTATTTTCTGGTCGAGTCCCGTCGGAAGTTTCACAGTTGGTCAAGTTGTCACTTCTTAATCTTTCTTTCAACACCGAACCTTCTTCTTCGGGTGTAGGATTGTTGACACTTGATGGATCCAATTTCAGAAGTCTAGTTCAAAACTTAACTAATCTTCAACATCTTCGTCTCCGTTTCATCAACATATCTTCACCAATACCTGATTCCATGGCCAATTTATCATTTTTGACAACCCTTGACTTACATCAGTGTCACTTGTTTGGAGACTTCCCAGTTAGAATTTTCCACTTACAAACCTTGCAAAATCTCTATCTCAGAGACAACCTAGATCTCATTGGTTATTTGCCTGAATTTAATAAAAGTAGTCGTCTCATAACTCTCGATCTTCATGGAACTAGATTTTCAGGGAACTTAGCCTTTTCGATCAAAAACCTTGGTTCTTTGAAACAGTTGGATGTGGGTGCGTGCAATTTTTCAGGAGGGTTGGTTCCATCTTCGCTAGGTAATCTCAGAGAACTGACTTATCTAGACATTTCATTAAACCAATTTGGAGGTCCTGTTCCAGATTCTTTTGCAAACCTTACAAAATTGTTTGTTTTTAGGATCAGTACGAGTCTACTAACTGGTCCAATCCCATCCTGGCTGGGTAATTTTAGCGAACTAGAGTACCTAGACTTTGGTTATAACAGATTGGATGGTTCAATTCCTACATTTTTTTCCAATCTCACGAATCTGCAGATTCTTTATCTTCAGTCCAATAACCTGAGTGGTATAGTGGAGTTTCAAACATTTCAAAACCTCCAAAATCTCTACCAACTCGATCTAAGATCTAATTCTTTGGAATTTTTCTCTGAATCCACAGCTGTGAATGCAAGTACTGTTCCACAGTTCACCCATCTAAGGTTAACTTCATGCAACGTAAAAGAGTTCCCATATTTCCTGAGATATCAAAAACATTTGGAGCGGTTGATGCTCAATAAAAACAAAATTCATGGTCAAATACCGAAATGGATGTGGAACATGAGCACAAAATCCTTGATTCAGCTAGACATTTCTGAAAATTTCCTTTCAGGCCAACTTCCTGTTTTCATTCCTTGGGTCAACCAACTATACTTGAGTCTTGCTTCCAACATGTTCCATGGGCCACTGCCGATACCTCCATCGTCCACTTTAGTCTATCAAGCTAATGACAACAAATTTACTGGAAAAGTTTCACCAGTGATCTGCAATATGAGTTCTCTTATGGCCCTTGATTTGTCCAATAACAACTTGAGTGGCATGATTCCGCAGTGTTTGGGAAACTTTAGTGATCTATTGACACTTCTAATTCTTGGAAATAACTCGTTTCATGGCACCCTACCGCAAACATACACCAACAAAAGCAGCTTGAGGATACTTGATGTGAGTCAAAATCAATTGCAAGGGCAACTACCAAGGTCATTGGCGAATTGTCTGATGCTTGAGACTTTGGTCCTGTCAAACAATTACTTCAATGATGTCTTTCCATTTTGGATGAGTACTCTACCTGAGTTGAAACTTTTGGCAATGCGGCATAATGCTTTCGAAGGATTGATAAGAAAGCCTGAAAACAATCAGCAGTTCCCAAAGTTGCGTATTTTAGATATTTCTCACAATAACTTCACAGGCAAGTTTGTAGCTGAATACATCTTCTCCATGTATGCCATGAGATCAGTCAACCAGACGACCTATATGGCGGTTGGCATCAATTACATCTCTGGTAATGATTGGCTCACTTATCCTTCCACGATGACAATAACCATTAAAGGTGTGGATAGATACTATTCAAGGGTTCAAGAAGCTTTTGCAGTCATTGATATCTCAAGCAACAAATTTGAAGGGAAGATTGATGAATCCATTGGGAGTCTAAAAGGGCTTTGGTCACTTAATTTTTCCAATAATCTTCTCAGCGGCCGTATCCCGTCATCGTTTGGGCACTTGACGAATCTTGAAGCACTAGACCTTTCCAATAACAAGCTCTGGGGAGAGATTCCCAAACAATTGGCACAGCTGACATTCCTTGAACAATTTGATGTCTCTCACAACAATCTCACAGGTCCAATACCGCGTGGACCGCAACTCAATACCTTCAATATCACTTCATATGAGGGAAACCCCGGATTGTGCGGAGATCCTTTGCCAAAGAGATGTCAGAGCTCTAACGCCCCGCCGCAACTGCCACCTTCAAACATAGAAGAAAATGATTCTGGAAGTGAATTTGAATGGGCTTTTGTGCTCGCTGGATGCGGAAGTGGGTTCGTGGTGGGAGTTGTGCTTGCTGACTTGGCCATCACACGGAGGCGTGAGTTCTTTCTTGAGATAGTTGGAACGTTGATCATACTAATGGAAAGGATCACAAGCTGGAAGGGGTTTGGACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

938

Amino Acids

105.2

Weight (kDa)

6.32

Isoelectric Point (pI)

43.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 21 - 74 1.7e-07 Leucine rich repeat N-terminal domain
LRR_14 PF23598 83 - 175 7.4e-06 Leucine-rich repeat region
LRR_14 PF23598 185 - 292 6.3e-08 Leucine-rich repeat region
LRR_14 PF23598 262 - 491 6.3e-13 Leucine-rich repeat region
LRR_8 PF13855 346 - 394 2.3e-06 Leucine rich repeat
LRR_8 PF13855 626 - 686 1.3e-06 Leucine rich repeat
LRR_8 PF13855 749 - 805 4e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1101
AccB1I GGYRCC 1 cut(s) 1769
AccBSI CCGCTC 1 cut(s) 1381
AccI GTMKAC 1 cut(s) 1033
AccII CGCG 1 cut(s) 2503
AclI AACGTT 1 cut(s) 2765
AclWI GGATC 5 cut(s) 528, 541, 1028, 2561, 2795
AcoI YGGCCR 3 cut(s) 627, 2347, 2721
AcuI CTGAAG 2 cut(s) 302, 1151
AfaI GTAC 5 cut(s) 35, 1027, 1085, 1294, 1936
AfiI CCNNNNNNNGG 2 cut(s) 1317, 2730
AflIII ACRYGT 1 cut(s) 1548
AjnI CCWGG 2 cut(s) 158, 1055
AjuI GAANNNNNNNTTGG 2 cut(s) 604, 636
AleI CACNNNNGTG 1 cut(s) 1280
AloI GAACNNNNNNTCC 4 cut(s) 888, 920, 960, 992
Alw21I GWGCWC 4 cut(s) 77, 1445, 2594, 2673
Alw26I GTCTC 7 cut(s) 272, 590, 675, 729, 791, 1874, 2476
AlwI GGATC 5 cut(s) 528, 541, 1028, 2561, 2795
AlwNI CAGNNNCTG 2 cut(s) 195, 325
AoxI GGCC 6 cut(s) 627, 1489, 1559, 1662, 2347, 2721
ApeKI GCWGC 4 cut(s) 46, 192, 195, 1800
ArsI GACNNNNNNTTYG 2 cut(s) 140, 172
Asp700I GAANNNNTTC 1 cut(s) 1627
AspS9I GGNCC 8 cut(s) 328, 971, 1043, 1559, 1663, 1888, 2492, 2507
AsuC2I CCSGG 1 cut(s) 2553
AsuHPI GGTGA 5 cut(s) 305, 385, 600, 1300, 1623
AsuII TTCGAA 1 cut(s) 1980
AvaII GGWCC 6 cut(s) 328, 971, 1043, 1888, 2492, 2507
BaeGI GKGCMC 1 cut(s) 2373
BaeI ACNNNNGTAYC 2 cut(s) 1067, 1100
BalI TGGCCA 2 cut(s) 629, 2723
BamHI GGATCC 1 cut(s) 533
BanI GGYRCC 1 cut(s) 1769
BanII GRGCYC 2 cut(s) 77, 2594
Bbv12I GWGCWC 4 cut(s) 77, 1445, 2594, 2673
BbvI GCAGC 4 cut(s) 58, 179, 182, 1812
BccI CCATC 9 cut(s) 200, 405, 524, 916, 1060, 1106, 1320, 1585, 2732
BceAI ACGGC 2 cut(s) 289, 2334
BcgI CGANNNNNNTGC 4 cut(s) 105, 139, 392, 426
BciT130I CCWGG 2 cut(s) 160, 1057
BciVI GTATCC 2 cut(s) 1803, 2363
BclI TGATCA 1 cut(s) 2769
BcnI CCSGG 1 cut(s) 2553
BcoDI GTCTC 7 cut(s) 272, 590, 675, 729, 791, 1874, 2476
BfmI CTRYAG 1 cut(s) 1151
BfuI GTATCC 2 cut(s) 1803, 2363
BglII AGATCT 2 cut(s) 745, 1244
BisI GCNGC 8 cut(s) 44, 47, 193, 196, 1801, 1967, 2347, 2606
BlsI GCNGC 8 cut(s) 45, 48, 194, 197, 1802, 1968, 2348, 2607
BmcAI AGTACT 2 cut(s) 1294, 1936
Bme1390I CCNGG 3 cut(s) 160, 1057, 2553
Bme18I GGWCC 6 cut(s) 328, 971, 1043, 1888, 2492, 2507
BmgT120I GGNCC 8 cut(s) 328, 971, 1043, 1559, 1663, 1888, 2492, 2507
BmiI GGNNCC 3 cut(s) 535, 906, 1771
BmrFI CCNGG 3 cut(s) 160, 1057, 2553
BmrI ACTGGG 1 cut(s) 683
BmsI GCATC 5 cut(s) 125, 1377, 1863, 2148, 2669
BmuI ACTGGG 1 cut(s) 683
BoxI GACNNNNGTC 1 cut(s) 1886
BplI GAGNNNNNCTC 2 cut(s) 59, 91
Bpu14I TTCGAA 1 cut(s) 1980
BpuEI CTTGAG 7 cut(s) 156, 1552, 1708, 1825, 1898, 2242, 2771
BpuMI CCSGG 1 cut(s) 2553
BsaAI YACGTR 1 cut(s) 33
BsaJI CCNNGG 7 cut(s) 386, 624, 850, 1511, 1555, 1850, 2551
BsaXI ACNNNNNCTCC 6 cut(s) 888, 918, 960, 990, 2072, 2102
Bsc4I CCNNNNNNNGG 2 cut(s) 1317, 2730
Bse1I ACTGG 4 cut(s) 689, 1045, 1624, 1634
Bse3DI GCAATG 1 cut(s) 1968
BseBI CCWGG 2 cut(s) 160, 1057
BseDI CCNNGG 7 cut(s) 386, 624, 850, 1511, 1555, 1850, 2551
BseGI GGATG 7 cut(s) 211, 877, 1052, 1117, 1434, 1935, 2684
BseLI CCNNNNNNNGG 2 cut(s) 1317, 2730
BseMI GCAATG 1 cut(s) 1968
BseMII CTCAG 7 cut(s) 268, 745, 940, 1172, 1349, 1935, 2356
BseNI ACTGG 4 cut(s) 689, 1045, 1624, 1634
BseRI GAGGAG 1 cut(s) 83
BseSI GKGCMC 1 cut(s) 2373
BseX3I CGGCCG 1 cut(s) 2347
BseXI GCAGC 4 cut(s) 58, 179, 182, 1812
BseYI CCCAGC 1 cut(s) 1060
BsgI GTGCAG 1 cut(s) 181
Bsh1236I CGCG 1 cut(s) 2503
Bsh1285I CGRYCG 1 cut(s) 2350
BshFI GGCC 6 cut(s) 629, 1491, 1561, 1664, 2349, 2723
BshNI GGYRCC 1 cut(s) 1769
BsiEI CGRYCG 1 cut(s) 2350
BsiHKAI GWGCWC 4 cut(s) 77, 1445, 2594, 2673
BsiSI CCGG 1 cut(s) 2553
BslFI GGGAC 1 cut(s) 419
BslI CCNNNNNNNGG 2 cut(s) 1317, 2730
BsmAI GTCTC 7 cut(s) 272, 590, 675, 729, 791, 1874, 2476
BsmBI CGTCTC 2 cut(s) 590, 791
BsmFI GGGAC 1 cut(s) 419
BsmI GAATGC 1 cut(s) 1291
BsnI GGCC 6 cut(s) 629, 1491, 1561, 1664, 2349, 2723
Bsp119I TTCGAA 1 cut(s) 1980
Bsp1286I GDGCHC 5 cut(s) 77, 1445, 2373, 2594, 2673
Bsp19I CCATGG 2 cut(s) 624, 1555
BspANI GGCC 6 cut(s) 629, 1491, 1561, 1664, 2349, 2723
BspCNI CTCAG 7 cut(s) 267, 744, 939, 1173, 1350, 1936, 2355
BspFNI CGCG 1 cut(s) 2503
BspHI TCATGA 1 cut(s) 61
BspLI GGNNCC 3 cut(s) 535, 906, 1771
BspMAI CTGCAG 1 cut(s) 1155
BspPI GGATC 5 cut(s) 528, 541, 1028, 2561, 2795
BspT104I TTCGAA 1 cut(s) 1980
BspT107I GGYRCC 1 cut(s) 1769
BsrBI CCGCTC 1 cut(s) 1381
BsrDI GCAATG 1 cut(s) 1968
BsrI ACTGG 4 cut(s) 689, 1045, 1624, 1634
BssECI CCNNGG 7 cut(s) 386, 624, 850, 1511, 1555, 1850, 2551
BssT1I CCWWGG 6 cut(s) 386, 624, 850, 1511, 1555, 1850
Bst2UI CCWGG 2 cut(s) 160, 1057
Bst4CI ACNGT 4 cut(s) 453, 867, 1297, 1305
Bst6I CTCTTC 1 cut(s) 305
BstBAI YACGTR 1 cut(s) 33
BstBI TTCGAA 1 cut(s) 1980
BstC8I GCNNGC 3 cut(s) 883, 2673, 2712
BstDSI CCRYGG 2 cut(s) 624, 1555
BstF5I GGATG 7 cut(s) 211, 877, 1052, 1117, 1434, 1935, 2684
BstFNI CGCG 1 cut(s) 2503
BstMAI GTCTC 7 cut(s) 272, 590, 675, 729, 791, 1874, 2476
BstMCI CGRYCG 1 cut(s) 2350
BstMWI GCNNNNNNNGC 5 cut(s) 1286, 1387, 2509, 2611, 2720
BstNI CCWGG 2 cut(s) 160, 1057
BstNSI RCATGY 1 cut(s) 1552
BstPAI GACNNNNGTC 1 cut(s) 1886
BstSCI CCNGG 3 cut(s) 158, 1055, 2551
BstSFI CTRYAG 1 cut(s) 1151
BstSLI GKGCMC 1 cut(s) 2373
BstSNI TACGTA 1 cut(s) 33
BstUI CGCG 1 cut(s) 2503
BstV1I GCAGC 4 cut(s) 58, 179, 182, 1812
BstX2I RGATCY 4 cut(s) 533, 745, 1244, 2566
BstXI CCANNNNNNTGG 1 cut(s) 2437
BstYI RGATCY 4 cut(s) 533, 745, 1244, 2566
BstZI CGGCCG 1 cut(s) 2347
BsuI GTATCC 2 cut(s) 1803, 2363
BsuRI GGCC 6 cut(s) 629, 1491, 1561, 1664, 2349, 2723
BtgI CCRYGG 2 cut(s) 624, 1555
BtsCI GGATG 7 cut(s) 211, 877, 1052, 1117, 1434, 1935, 2684
BtsI GCAGTG 2 cut(s) 1562, 1712
BtsIMutI CAGTG 4 cut(s) 671, 1562, 1641, 1712
Cac8I GCNNGC 3 cut(s) 883, 2673, 2712
CaiI CAGNNNCTG 2 cut(s) 195, 325
CciI TCATGA 1 cut(s) 61
Cfr13I GGNCC 8 cut(s) 328, 971, 1043, 1559, 1663, 1888, 2492, 2507
Csp6I GTAC 5 cut(s) 34, 1026, 1084, 1293, 1935
CspCI CAANNNNNGTGG 2 cut(s) 1672, 1707
CviQI GTAC 5 cut(s) 34, 1026, 1084, 1293, 1935
EaeI YGGCCR 3 cut(s) 627, 2347, 2721
EagI CGGCCG 1 cut(s) 2347
Eam1104I CTCTTC 1 cut(s) 305
EarI CTCTTC 1 cut(s) 305
Ecl136II GAGCTC 2 cut(s) 75, 2592
EclXI CGGCCG 1 cut(s) 2347
Eco105I TACGTA 1 cut(s) 33
Eco130I CCWWGG 6 cut(s) 386, 624, 850, 1511, 1555, 1850
Eco24I GRGCYC 2 cut(s) 77, 2594
Eco32I GATATC 2 cut(s) 1364, 2254
Eco47I GGWCC 6 cut(s) 328, 971, 1043, 1888, 2492, 2507
Eco52I CGGCCG 1 cut(s) 2347
Eco53kI GAGCTC 2 cut(s) 75, 2592
Eco57I CTGAAG 2 cut(s) 302, 1151
EcoICRI GAGCTC 2 cut(s) 75, 2592
EcoO109I RGGNCCY 1 cut(s) 971
EcoRII CCWGG 2 cut(s) 158, 1055
EcoRV GATATC 2 cut(s) 1364, 2254
EcoT14I CCWWGG 6 cut(s) 386, 624, 850, 1511, 1555, 1850
EcoT22I ATGCAT 1 cut(s) 118
EcoT38I GRGCYC 2 cut(s) 77, 2594
ErhI CCWWGG 6 cut(s) 386, 624, 850, 1511, 1555, 1850
Esp3I CGTCTC 2 cut(s) 590, 791
FalI AAGNNNNNCTT 4 cut(s) 86, 118, 1309, 1341
FaqI GGGAC 1 cut(s) 419
FauI CCCGC 1 cut(s) 2610
FauNDI CATATG 1 cut(s) 2539
FbaI TGATCA 1 cut(s) 2769
FblI GTMKAC 1 cut(s) 1033
Fnu4HI GCNGC 8 cut(s) 44, 47, 193, 196, 1801, 1967, 2347, 2606
FokI GGATG 7 cut(s) 218, 884, 1039, 1124, 1441, 1942, 2691
FriOI GRGCYC 2 cut(s) 77, 2594
Fsp4HI GCNGC 8 cut(s) 44, 47, 193, 196, 1801, 1967, 2347, 2606
GluI GCNGC 8 cut(s) 44, 47, 193, 196, 1801, 1967, 2347, 2606
GsaI CCCAGC 1 cut(s) 1064
HaeIII GGCC 6 cut(s) 629, 1491, 1561, 1664, 2349, 2723
HapII CCGG 1 cut(s) 2553
HincII GTYRAC 4 cut(s) 522, 1323, 1519, 2113
HindII GTYRAC 4 cut(s) 522, 1323, 1519, 2113
HindIII AAGCTT 2 cut(s) 100, 2235
HpaI GTTAAC 1 cut(s) 1323
HpaII CCGG 1 cut(s) 2553
HphI GGTGA 5 cut(s) 305, 385, 600, 1300, 1623
Hpy99I CGWCG 1 cut(s) 442
HpyAV CCTTC 8 cut(s) 326, 507, 1976, 2187, 2267, 2533, 2628, 2794
HpyCH4III ACNGT 4 cut(s) 453, 867, 1297, 1305
HpyCH4IV ACGT 3 cut(s) 32, 1335, 2765
HpyF10VI GCNNNNNNNGC 5 cut(s) 1286, 1387, 2509, 2611, 2720
HpySE526I ACGT 3 cut(s) 32, 1335, 2765
Ksp22I TGATCA 1 cut(s) 2769
KspAI GTTAAC 1 cut(s) 1323
LmnI GCTCC 2 cut(s) 299, 1378
Lsp1109I GCAGC 4 cut(s) 58, 179, 182, 1812
LweI GCATC 5 cut(s) 125, 1377, 1863, 2148, 2669
MaeII ACGT 3 cut(s) 32, 1335, 2765
MaeIII GTNAC 4 cut(s) 218, 465, 668, 2316
MbiI CCGCTC 1 cut(s) 1381
MfeI CAATTG 2 cut(s) 1832, 2435
MflI RGATCY 4 cut(s) 533, 745, 1244, 2566
MhlI GDGCHC 5 cut(s) 77, 1445, 2373, 2594, 2673
MlsI TGGCCA 2 cut(s) 629, 2723
MluNI TGGCCA 2 cut(s) 629, 2723
MlyI GAGTC 5 cut(s) 441, 1039, 1543, 1831, 2308
MmeI TCCRAC 5 cut(s) 312, 420, 849, 1569, 2740
Mox20I TGGCCA 2 cut(s) 629, 2723
Mph1103I ATGCAT 1 cut(s) 118
MroXI GAANNNNTTC 1 cut(s) 1627
MscI TGGCCA 2 cut(s) 629, 2723
MseI TTAA 7 cut(s) 474, 563, 771, 956, 1322, 2199, 2322
MslI CAYNNNNRTG 2 cut(s) 1280, 2777
Msp20I TGGCCA 2 cut(s) 629, 2723
MspA1I CMGCKG 4 cut(s) 192, 1280, 2346, 2446
MspI CCGG 1 cut(s) 2553
MspR9I CCNGG 3 cut(s) 160, 1057, 2553
MunI CAATTG 2 cut(s) 1832, 2435
Mva1269I GAATGC 1 cut(s) 1291
MvaI CCWGG 2 cut(s) 160, 1057
MvnI CGCG 1 cut(s) 2503
MwoI GCNNNNNNNGC 5 cut(s) 1286, 1387, 2509, 2611, 2720
NciI CCSGG 1 cut(s) 2553
NcoI CCATGG 2 cut(s) 624, 1555
NdeI CATATG 1 cut(s) 2539
NlaIV GGNNCC 3 cut(s) 535, 906, 1771
NmuCI GTSAC 4 cut(s) 218, 465, 668, 2316
NsiI ATGCAT 1 cut(s) 118
NspI RCATGY 1 cut(s) 1552
NspV TTCGAA 1 cut(s) 1980
OliI CACNNNNGTG 1 cut(s) 1280
PagI TCATGA 1 cut(s) 61
PciI ACATGT 1 cut(s) 1548
PcsI WCGNNNNNNNCGW 1 cut(s) 219
PctI GAATGC 1 cut(s) 1291
PdmI GAANNNNTTC 1 cut(s) 1627
PfoI TCCNGGA 1 cut(s) 158
PkrI GCNGC 8 cut(s) 45, 48, 194, 197, 1802, 1968, 2348, 2607
PleI GAGTC 5 cut(s) 440, 1038, 1542, 1830, 2307
PpsI GAGTC 5 cut(s) 440, 1038, 1542, 1830, 2307
Ppu21I YACGTR 1 cut(s) 33
PpuMI RGGWCCY 1 cut(s) 971
PscI ACATGT 1 cut(s) 1548
PshAI GACNNNNGTC 1 cut(s) 1886
PsiI TTATAA 1 cut(s) 1101
Psp124BI GAGCTC 2 cut(s) 77, 2594
Psp1406I AACGTT 1 cut(s) 2765
Psp5II RGGWCCY 1 cut(s) 971
Psp6I CCWGG 2 cut(s) 158, 1055
PspFI CCCAGC 1 cut(s) 1060
PspGI CCWGG 2 cut(s) 158, 1055
PspN4I GGNNCC 3 cut(s) 535, 906, 1771
PspPI GGNCC 8 cut(s) 328, 971, 1043, 1559, 1663, 1888, 2492, 2507
PspPPI RGGWCCY 1 cut(s) 971
PstI CTGCAG 1 cut(s) 1155
PstNI CAGNNNCTG 2 cut(s) 195, 325
PsuI RGATCY 4 cut(s) 533, 745, 1244, 2566
PvuII CAGCTG 3 cut(s) 192, 1280, 2446
RsaI GTAC 5 cut(s) 35, 1027, 1085, 1294, 1936
RsaNI GTAC 5 cut(s) 34, 1026, 1084, 1293, 1935
RseI CAYNNNNRTG 2 cut(s) 1280, 2777
SacI GAGCTC 2 cut(s) 77, 2594
SaqAI TTAA 7 cut(s) 474, 563, 771, 956, 1322, 2199, 2322
SatI GCNGC 8 cut(s) 44, 47, 193, 196, 1801, 1967, 2347, 2606
Sau96I GGNCC 8 cut(s) 328, 971, 1043, 1559, 1663, 1888, 2492, 2507
ScaI AGTACT 2 cut(s) 1294, 1936
SchI GAGTC 5 cut(s) 441, 1039, 1543, 1831, 2308
ScrFI CCNGG 3 cut(s) 160, 1057, 2553
SduI GDGCHC 5 cut(s) 77, 1445, 2373, 2594, 2673
SfaNI GCATC 5 cut(s) 125, 1377, 1863, 2148, 2669
SfcI CTRYAG 1 cut(s) 1151
SfuI TTCGAA 1 cut(s) 1980
SinI GGWCC 6 cut(s) 328, 971, 1043, 1888, 2492, 2507
SmiMI CAYNNNNRTG 2 cut(s) 1280, 2777
SmlI CTYRAG 7 cut(s) 171, 1531, 1687, 1804, 1877, 2257, 2750
SmoI CTYRAG 7 cut(s) 171, 1531, 1687, 1804, 1877, 2257, 2750
SnaBI TACGTA 1 cut(s) 33
SstI GAGCTC 2 cut(s) 77, 2594
StyD4I CCNGG 3 cut(s) 158, 1055, 2551
StyI CCWWGG 6 cut(s) 386, 624, 850, 1511, 1555, 1850
TaaI ACNGT 4 cut(s) 453, 867, 1297, 1305
TaiI ACGT 3 cut(s) 35, 1338, 2768
TaqI TCGA 8 cut(s) 7, 213, 402, 430, 798, 839, 1236, 1980
TatI WGTACW 2 cut(s) 1292, 1934
TauI GCSGC 4 cut(s) 46, 1969, 2349, 2608
Tru1I TTAA 7 cut(s) 474, 563, 771, 956, 1322, 2199, 2322
Tru9I TTAA 7 cut(s) 474, 563, 771, 956, 1322, 2199, 2322
TscAI CASTG 4 cut(s) 671, 1569, 1641, 1712
TseFI GTSAC 4 cut(s) 218, 465, 668, 2316
TseI GCWGC 4 cut(s) 46, 192, 195, 1800
Tsp45I GTSAC 4 cut(s) 218, 465, 668, 2316
TspDTI ATGAA 9 cut(s) 583, 794, 942, 1317, 1397, 1495, 1754, 2301, 2526
TspGWI ACGGA 3 cut(s) 293, 578, 2746
TspRI CASTG 4 cut(s) 671, 1569, 1641, 1712
VpaK11BI GGWCC 6 cut(s) 328, 971, 1043, 1888, 2492, 2507
XbaI TCTAGA 1 cut(s) 943
XceI RCATGY 1 cut(s) 1552
XcmI CCANNNNNNNNNTGG 2 cut(s) 1053, 2203
XmiI GTMKAC 1 cut(s) 1033
XmnI GAANNNNTTC 1 cut(s) 1627
ZrmI AGTACT 2 cut(s) 1294, 1936
Zsp2I ATGCAT 1 cut(s) 118
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.