FvH4_6g40820

Leucine rich repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000024
Physical Location & Seq
Forward (+)
32206182 .. 32209679
3498 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g40820.t1

Sequence Viewer

Length: 3072 bp
ATGGGATCGTCCTGGTGCGATTTCTTTCCTCTGCGTTATTTTACACTTGTGTTGCTCATGAATGCTGCAGGCTGTTTCTCTTTTGTACAGACGCAGGCACTTTGCCATGATGATGAGCGCTCTGCCTTGTTGCAATTCAAAGCTAGTTTCACTATAGACAAGTCTGCTTCCCAAGATCCCTTTGCTTTTCCGAAAGTTTCATCCTGGGGTAGGTTAGCAGGAGATACTCAAAGGAATAATTGTTGTTCATGGGATGGTGTTGAATGCAACGACAACTCTGGCCATGTTATTGGGCTTGACCTTGCCAGCAGTTATCTTCATGGTTCCATCAATTCCAACAGCAGTCTTTTCCAGCTTGTTCACCTGCAGAGCCTTGACCTCTCTGATAATAACTTCAGCTTCTCTCAAATTCCATCCAGGTTAGGCCATGCTCTTACTAGTCTAACATATCTCAACCTCTCAATGTCTTCATTTTCTGGCCAAATTCCTTCAGAAATGTCATATCTATCCAACCTATCTACACTTCATCTGTCATCAAATTCGGCTCCGGATTTCAAAATCCCTCCTCTCAAGATGCCTGACTTCAGAAGTCTAGTTCAGAACTTGACCAACATAAAACAGCTTCATCTTTTTGACGTTGAGATAAGCTCCACTGTACCTAATACATTGATGAATTTGTCTTCTCTCACATCTCTCCGTCTTCATGCATGTAAATTGGAAGGGAAATTCCCAGTAGGCATTTTCCACCTACCAAACTTGCAAGTACTTGATTTGTCCGATAACTATGATCTAACCGGTTATATTCCTGATGACCTTAACACCAGCAGCCCTTTGAAGATACTGAATTTGCAGGCAACCGATTTCTCTGGTCGTATACCAGCTTCAATTGGAAACCTTCGTGTCTTAAATTTGTTGAATATACGTTCTTGTAACTTTTATCCCTATGTTCCATCTTTCCTTTCCAACCTTACCCAGCTCAATTTCCTTGAACTTTCTTCCTTTTATGACTATAGTTATCTACCAGACCTTCCAACAATCCATACTTTCAGTGACCAAGTTTCAGATTCCTGGTCTTGGTTTGGAAAGCTATCCAAACTTAACTACTTGGCCCTTGATACTACCCACTTAAGGGGGAATTTGCCATGTTCTTTGGCTAATCTCACTCAACTTTTGGTATTAGACTTGGACCAGAATGAGATTACTGGTGAAATCCCATGTTGTTTGGCTAATCTGAAACAACTTGCAAAATTAAGCTTAGGCCACAATCAAATAACTGGTCAAATCCCATCATGCCTTATGCAGTTGACCCAGTTAACTTTGTTAGACCTACGATTCAACAATCTGCAAGGAGAAATTCCCAGGTCACTTTTTGAGCTAAGAAATCTTGAACATATTTATCTCCACTCAAATAACCTGAGTGGGCCTGTTGTATTGGATGAGTTTTCCAAGCTCCAAAAGTTGAGGGGACTTCGTTTGTCACTCAACAAGTTTTCTGTGCAGATCAAAACTGGATTCAAAGCCATTTCTCCAAGGCTTAAAGTACTAGGATTGGGTTCATGCAACATAACAGAGTTCCCGGAATTTTTGAAATACGCTGGTGAACTGGAGGATCTGGATCTATCTGACAACAATCTGCATGGCCAAATACCAAAGTGGATGTGGATTTCAACAGGTGAAACTTTGAGGTTTCTCAACCTCTCTCACAACCACTTAAATGGATTTGAAGAAAATCCGGTCATTATTCCATGGCAAGGGTTATACTCTTTACAGCTTGACTCTAACATGTTACAAGGATCACTGCCCATTCCATCGCCATTGATATCATACTATTCTGTTTCAAACAATGAATATGCAGGAGAAATTCCAGCAGCATTCTGCAACACATGGCCACTATGTATTCTTGACTTGTCTAACAACAACCTGAATGGCAAGATTCCACCATGTTTCGAGAATCTCAGATTTTTTCAGTTATTGAAACTACAGAACAATTCCTTTCACGGTGCTATTCCTCAAATAGGTTTGAAAAGATGCCTGTGGTTAAGAGGGATTGACATGAGTGATAATCAGCTACAAGGGAAGCTACCAAGATCAATTGCCAATTGTTCTAAGTTGATGTATCTTAATTTGGGAAATAATCAGATCAGTGATACTTTCCCATCTTGGTTAGGAGTGCTTCAACAGTTCAAAGTTCTCATTTTGCGATCTAATGCATTTCATGGAATAATTGGAAAGCCTACAAGTAGCCATGAGTTCCCTGAGCTGTCCATCATTGATTTATCCAGCAATGATTTTTCAGGTATACTGCCCTCCAATTACATAGAGAACTGGATTGCCATGAAAACTGTTGATGCGAACCAGCAAGTATACTTCCAATCCATGTTCTTCTTCGGCGGGACGTATCAAGAAACATTCTACTATGATTACCCGATTACAGTTTCCAGCAAAGGTGTTAAGTTGAAGTATAGCAAGACCCCTTATCTTATGAGACTCATAGACTTCTCAAGTAACAGATTTGCAGGAGAGATTCCAGGTGTCATTGGGAACCTAAGAGGGCTTAATCTGCTTAATCTTTCCAACAACACTCTCACTGGTCTCATCCCCTTGTCTTTGGGGAACTTGAGTGCTCTTGAATCGTTGGATCTCTCCCAAAATCAGCTCTCAGGAAAGATCCCCAGCAATTTAGCACAACTGACATTCCTTGCATTCTTCGATGTATCCAACAATAGTCTCTATGGTCCTATCCCAGAAGGTCCACAGTTTGATACATTCCAAGAAGATATGTACCAAGGGAACTCCGGTTTGTGTGGAAAACTTTTGTCAAAGAAATGTGAAGATTCTGAGAGCGGAACACCACAAACAACTATTGAACAAGATGAGGACTCTGGGTTTCAAGTTGAGCTTGATTGGTTCATGTTTCTGCCAGGAATTGTTGCTGGTCTAATAGTTGGAGTGGTTGGAGAAAACTTTTGGACAGCCAAGAAGCATGAGTGGTTTGTAGATACATTCAGCAGGAGGAGAAGGCAGGCTAAACGTAGACAACGGAGGAGGGAACAGAGACCTTGGTCATATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1024

Amino Acids

114.95

Weight (kDa)

5.92

Isoelectric Point (pI)

42.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 36 - 90 7.3e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 111 - 234 1.2e-08 Leucine-rich repeat region
LRR_14 PF23598 251 - 334 5.3e-08 Leucine-rich repeat region
LRR_14 PF23598 357 - 540 3.7e-12 Leucine-rich repeat region
LRR_8 PF13855 834 - 886 2.2e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 372
Acc36I ACCTGC 1 cut(s) 372
AccBSI CCGCTC 1 cut(s) 2844
AccI GTMKAC 4 cut(s) 874, 2299, 2364, 3034
AccIII TCCGGA 1 cut(s) 547
AciI CCGC 2 cut(s) 2391, 2844
AclWI GGATC 7 cut(s) 13, 170, 1617, 1623, 1801, 2646, 2662
AcoI YGGCCR 4 cut(s) 280, 478, 1639, 1886
AcuI CTGAAG 3 cut(s) 379, 474, 568
AfaI GTAC 5 cut(s) 87, 657, 765, 1542, 2783
AfeI AGCGCT 1 cut(s) 119
AfiI CCNNNNNNNGG 6 cut(s) 210, 1074, 1128, 1129, 1751, 2015
AflII CTTAAG 1 cut(s) 1126
AflIII ACRYGT 1 cut(s) 1782
AgeI ACCGGT 1 cut(s) 794
AhlI ACTAGT 1 cut(s) 437
AjnI CCWGG 7 cut(s) 11, 203, 416, 1067, 1358, 2527, 2920
Alw21I GWGCWC 1 cut(s) 2626
Alw26I GTCTC 4 cut(s) 2479, 2597, 2732, 3049
AlwI GGATC 7 cut(s) 13, 170, 1617, 1623, 1801, 2646, 2662
Aor13HI TCCGGA 1 cut(s) 547
Aor51HI AGCGCT 1 cut(s) 119
AoxI GGCC 8 cut(s) 280, 424, 478, 1107, 1258, 1421, 1639, 1886
ApeKI GCWGC 3 cut(s) 65, 825, 1868
ArsI GACNNNNNNTTYG 2 cut(s) 1261, 1293
AsiGI ACCGGT 1 cut(s) 794
AspLEI GCGC 1 cut(s) 120
AspS9I GGNCC 5 cut(s) 1108, 1186, 1421, 2735, 2750
AsuC2I CCSGG 1 cut(s) 1577
AsuHPI GGTGA 4 cut(s) 353, 1217, 1610, 1685
AvaII GGWCC 3 cut(s) 1186, 2735, 2750
BalI TGGCCA 4 cut(s) 282, 480, 1641, 1888
BarI GAAGNNNNNNTAC 2 cut(s) 865, 897
BbsI GAAGAC 3 cut(s) 459, 672, 692
Bbv12I GWGCWC 1 cut(s) 2626
BbvI GCAGC 3 cut(s) 52, 837, 1880
BccI CCATC 8 cut(s) 248, 335, 421, 958, 1294, 1816, 2164, 2273
BciT130I CCWGG 7 cut(s) 13, 205, 418, 1069, 1360, 2529, 2922
BciVI GTATCC 1 cut(s) 2725
BcnI CCSGG 1 cut(s) 1577
BcoDI GTCTC 4 cut(s) 2479, 2597, 2732, 3049
BcuI ACTAGT 1 cut(s) 437
BfaI CTAG 4 cut(s) 144, 438, 593, 1544
BfmI CTRYAG 5 cut(s) 66, 153, 365, 1009, 1979
BfoI RGCGCY 1 cut(s) 121
BfrI CTTAAG 1 cut(s) 1126
BfuAI ACCTGC 1 cut(s) 372
BfuI GTATCC 1 cut(s) 2725
BisI GCNGC 3 cut(s) 66, 826, 1869
BlsI GCNGC 3 cut(s) 67, 827, 1870
BmcAI AGTACT 2 cut(s) 765, 1542
Bme1390I CCNGG 8 cut(s) 13, 205, 418, 1069, 1360, 1577, 2529, 2922
Bme18I GGWCC 3 cut(s) 1186, 2735, 2750
BmgT120I GGNCC 5 cut(s) 1108, 1186, 1421, 2735, 2750
BmiI GGNNCC 3 cut(s) 325, 546, 2543
BmrFI CCNGG 8 cut(s) 13, 205, 418, 1069, 1360, 1577, 2529, 2922
BmrI ACTGGG 2 cut(s) 725, 1303
BmsI GCATC 3 cut(s) 564, 2018, 2338
BmuI ACTGGG 2 cut(s) 725, 1303
BoxI GACNNNNGTC 1 cut(s) 3061
BpiI GAAGAC 3 cut(s) 459, 672, 692
BplI GAGNNNNNCTC 2 cut(s) 632, 664
BpmI CTGGAG 1 cut(s) 1625
Bpu10I CCTNAGC 2 cut(s) 1255, 2256
BpuEI CTTGAG 3 cut(s) 554, 2485, 2638
BpuMI CCSGG 1 cut(s) 1577
BsaBI GATNNNNATC 1 cut(s) 1614
BsaI GGTCTC 2 cut(s) 2597, 3049
BsaJI CCNNGG 6 cut(s) 204, 1358, 1529, 1745, 2785, 3059
BsaWI WCCGGW 4 cut(s) 547, 794, 1732, 2795
Bsc4I CCNNNNNNNGG 6 cut(s) 210, 1074, 1128, 1129, 1751, 2015
Bse118I RCCGGY 1 cut(s) 794
Bse1I ACTGG 8 cut(s) 731, 1207, 1279, 1309, 1513, 1608, 2330, 2593
Bse3DI GCAATG 1 cut(s) 2290
Bse8I GATNNNNATC 1 cut(s) 1614
BseAI TCCGGA 1 cut(s) 547
BseBI CCWGG 7 cut(s) 13, 205, 418, 1069, 1360, 2529, 2922
BseDI CCNNGG 6 cut(s) 204, 1358, 1529, 1745, 2785, 3059
BseGI GGATG 6 cut(s) 200, 259, 413, 1441, 1662, 2595
BseJI GATNNNNATC 1 cut(s) 1614
BseLI CCNNNNNNNGG 6 cut(s) 210, 1074, 1128, 1129, 1751, 2015
BseMI GCAATG 1 cut(s) 2290
BseMII CTCAG 5 cut(s) 1406, 1969, 2247, 2673, 2829
BseNI ACTGG 8 cut(s) 731, 1207, 1279, 1309, 1513, 1608, 2330, 2593
BseRI GAGGAG 3 cut(s) 555, 3028, 3058
BseXI GCAGC 3 cut(s) 52, 837, 1880
BseYI CCCAGC 2 cut(s) 972, 2672
BsgI GTGCAG 1 cut(s) 1517
BshFI GGCC 8 cut(s) 282, 426, 480, 1109, 1260, 1423, 1641, 1888
BshTI ACCGGT 1 cut(s) 794
BsiHKAI GWGCWC 1 cut(s) 2626
BsiSI CCGG 5 cut(s) 548, 795, 1577, 1733, 2796
BslFI GGGAC 2 cut(s) 1479, 2407
BslI CCNNNNNNNGG 6 cut(s) 210, 1074, 1128, 1129, 1751, 2015
BsmAI GTCTC 4 cut(s) 2479, 2597, 2732, 3049
BsmFI GGGAC 2 cut(s) 1479, 2407
BsmI GAATGC 4 cut(s) 67, 269, 1871, 2702
BsnI GGCC 8 cut(s) 282, 426, 480, 1109, 1260, 1423, 1641, 1888
Bso31I GGTCTC 2 cut(s) 2597, 3049
Bsp1286I GDGCHC 1 cut(s) 2626
Bsp13I TCCGGA 1 cut(s) 547
Bsp1407I TGTACA 1 cut(s) 85
Bsp19I CCATGG 1 cut(s) 1745
BspACI CCGC 2 cut(s) 2391, 2844
BspANI GGCC 8 cut(s) 282, 426, 480, 1109, 1260, 1423, 1641, 1888
BspCNI CTCAG 5 cut(s) 1407, 1968, 2248, 2672, 2830
BspEI TCCGGA 1 cut(s) 547
BspHI TCATGA 1 cut(s) 57
BspLI GGNNCC 3 cut(s) 325, 546, 2543
BspMAI CTGCAG 2 cut(s) 70, 369
BspMI ACCTGC 1 cut(s) 372
BspPI GGATC 7 cut(s) 13, 170, 1617, 1623, 1801, 2646, 2662
BspTI CTTAAG 1 cut(s) 1126
BspTNI GGTCTC 2 cut(s) 2597, 3049
BsrBI CCGCTC 1 cut(s) 2844
BsrDI GCAATG 1 cut(s) 2290
BsrFI RCCGGY 1 cut(s) 794
BsrGI TGTACA 1 cut(s) 85
BsrI ACTGG 8 cut(s) 731, 1207, 1279, 1309, 1513, 1608, 2330, 2593
BssAI RCCGGY 1 cut(s) 794
BssECI CCNNGG 6 cut(s) 204, 1358, 1529, 1745, 2785, 3059
BssNAI GTATAC 3 cut(s) 875, 2300, 2365
BssT1I CCWWGG 4 cut(s) 1529, 1745, 2785, 3059
Bst1107I GTATAC 3 cut(s) 875, 2300, 2365
Bst2UI CCWGG 7 cut(s) 13, 205, 418, 1069, 1360, 2529, 2922
Bst4CI ACNGT 6 cut(s) 655, 2000, 2181, 2344, 2434, 2757
BstAFI CTTAAG 1 cut(s) 1126
BstAUI TGTACA 1 cut(s) 85
BstC8I GCNNGC 5 cut(s) 70, 96, 307, 852, 3024
BstDEI CTNAG 9 cut(s) 1255, 1376, 1415, 1955, 2106, 2256, 2546, 2659, 2838
BstDSI CCRYGG 1 cut(s) 1745
BstENI CCTNNNNNAGG 2 cut(s) 208, 2013
BstF5I GGATG 6 cut(s) 200, 259, 413, 1441, 1662, 2595
BstH2I RGCGCY 1 cut(s) 121
BstHHI GCGC 1 cut(s) 120
BstMAI GTCTC 4 cut(s) 2479, 2597, 2732, 3049
BstMWI GCNNNNNNNGC 1 cut(s) 2560
BstNI CCWGG 7 cut(s) 13, 205, 418, 1069, 1360, 2529, 2922
BstNSI RCATGY 2 cut(s) 711, 1786
BstPAI GACNNNNGTC 1 cut(s) 3061
BstSCI CCNGG 8 cut(s) 11, 203, 416, 1067, 1358, 1575, 2527, 2920
BstSFI CTRYAG 5 cut(s) 66, 153, 365, 1009, 1979
BstV1I GCAGC 3 cut(s) 52, 837, 1880
BstV2I GAAGAC 3 cut(s) 459, 672, 692
BstX2I RGATCY 5 cut(s) 175, 1609, 1615, 2638, 2667
BstXI CCANNNNNNTGG 2 cut(s) 290, 1715
BstYI RGATCY 5 cut(s) 175, 1609, 1615, 2638, 2667
BstZ17I GTATAC 3 cut(s) 875, 2300, 2365
BsuI GTATCC 1 cut(s) 2725
BsuRI GGCC 8 cut(s) 282, 426, 480, 1109, 1260, 1423, 1641, 1888
BtgI CCRYGG 1 cut(s) 1745
BtgZI GCGATG 1 cut(s) 1794
BtsCI GGATG 6 cut(s) 200, 259, 413, 1441, 1662, 2595
BtsI GCAGTG 1 cut(s) 1796
BtsIMutI CAGTG 5 cut(s) 651, 1054, 1796, 2149, 2586
BveI ACCTGC 1 cut(s) 372
Cac8I GCNNGC 5 cut(s) 70, 96, 307, 852, 3024
CciI TCATGA 1 cut(s) 57
CfoI GCGC 1 cut(s) 120
Cfr10I RCCGGY 1 cut(s) 794
Cfr13I GGNCC 5 cut(s) 1108, 1186, 1421, 2735, 2750
CseI GACGC 1 cut(s) 100
Csp6I GTAC 5 cut(s) 86, 656, 764, 1541, 2782
CspAI ACCGGT 1 cut(s) 794
CviQI GTAC 5 cut(s) 86, 656, 764, 1541, 2782
DdeI CTNAG 9 cut(s) 1255, 1376, 1415, 1955, 2106, 2256, 2546, 2659, 2838
EaeI YGGCCR 4 cut(s) 280, 478, 1639, 1886
Eco130I CCWWGG 4 cut(s) 1529, 1745, 2785, 3059
Eco31I GGTCTC 2 cut(s) 2597, 3049
Eco32I GATATC 1 cut(s) 1821
Eco47I GGWCC 3 cut(s) 1186, 2735, 2750
Eco47III AGCGCT 1 cut(s) 119
Eco57I CTGAAG 3 cut(s) 379, 474, 568
EcoNI CCTNNNNNAGG 2 cut(s) 208, 2013
EcoRII CCWGG 7 cut(s) 11, 203, 416, 1067, 1358, 2527, 2920
EcoRV GATATC 1 cut(s) 1821
EcoT14I CCWWGG 4 cut(s) 1529, 1745, 2785, 3059
EcoT22I ATGCAT 2 cut(s) 709, 2212
ErhI CCWWGG 4 cut(s) 1529, 1745, 2785, 3059
FalI AAGNNNNNCTT 2 cut(s) 2883, 2915
FaqI GGGAC 2 cut(s) 1479, 2407
FauI CCCGC 1 cut(s) 2384
FblI GTMKAC 4 cut(s) 874, 2299, 2364, 3034
Fnu4HI GCNGC 3 cut(s) 66, 826, 1869
FokI GGATG 6 cut(s) 187, 266, 400, 1448, 1669, 2582
Fsp4HI GCNGC 3 cut(s) 66, 826, 1869
FspBI CTAG 4 cut(s) 144, 438, 593, 1544
GlaI GCGC 1 cut(s) 119
GluI GCNGC 3 cut(s) 66, 826, 1869
GsaI CCCAGC 2 cut(s) 976, 2676
GsuI CTGGAG 1 cut(s) 1625
HaeII RGCGCY 1 cut(s) 121
HaeIII GGCC 8 cut(s) 282, 426, 480, 1109, 1260, 1423, 1641, 1888
HapII CCGG 5 cut(s) 548, 795, 1577, 1733, 2796
HgaI GACGC 1 cut(s) 100
HhaI GCGC 1 cut(s) 120
Hin6I GCGC 1 cut(s) 118
HinP1I GCGC 1 cut(s) 118
HincII GTYRAC 2 cut(s) 1305, 1314
HindII GTYRAC 2 cut(s) 1305, 1314
HindIII AAGCTT 1 cut(s) 1252
HpaI GTTAAC 1 cut(s) 1314
HpaII CCGG 5 cut(s) 548, 795, 1577, 1733, 2796
HphI GGTGA 4 cut(s) 353, 1217, 1610, 1685
Hpy166II GTNNAC 9 cut(s) 361, 875, 1305, 1314, 1601, 2300, 2365, 2753, 3035
Hpy8I GTNNAC 9 cut(s) 361, 875, 1305, 1314, 1601, 2300, 2365, 2753, 3035
HpyAV CCTTC 6 cut(s) 498, 713, 905, 1037, 2741, 3012
HpyCH4III ACNGT 6 cut(s) 655, 2000, 2181, 2344, 2434, 2757
HpyCH4IV ACGT 4 cut(s) 636, 922, 2396, 3031
HpyF10VI GCNNNNNNNGC 1 cut(s) 2560
HpyF3I CTNAG 9 cut(s) 1255, 1376, 1415, 1955, 2106, 2256, 2546, 2659, 2838
HpySE526I ACGT 4 cut(s) 636, 922, 2396, 3031
HspAI GCGC 1 cut(s) 118
Kpn2I TCCGGA 1 cut(s) 547
KspAI GTTAAC 1 cut(s) 1314
LmnI GCTCC 3 cut(s) 550, 653, 1455
Lsp1109I GCAGC 3 cut(s) 52, 837, 1880
LweI GCATC 3 cut(s) 564, 2018, 2338
MaeI CTAG 4 cut(s) 144, 438, 593, 1544
MaeII ACGT 4 cut(s) 636, 922, 2396, 3031
MaeIII GTNAC 6 cut(s) 929, 1049, 1362, 1476, 1785, 2504
MbiI CCGCTC 1 cut(s) 2844
MfeI CAATTG 3 cut(s) 885, 2091, 2098
MflI RGATCY 5 cut(s) 175, 1609, 1615, 2638, 2667
MhlI GDGCHC 1 cut(s) 2626
MlsI TGGCCA 4 cut(s) 282, 480, 1641, 1888
MluNI TGGCCA 4 cut(s) 282, 480, 1641, 1888
MlyI GAGTC 3 cut(s) 1769, 2481, 2873
MmeI TCCRAC 9 cut(s) 360, 534, 987, 1055, 2598, 2616, 2742, 2926, 2935
Mox20I TGGCCA 4 cut(s) 282, 480, 1641, 1888
Mph1103I ATGCAT 2 cut(s) 709, 2212
MroI TCCGGA 1 cut(s) 547
MscI TGGCCA 4 cut(s) 282, 480, 1641, 1888
MslI CAYNNNNRTG 2 cut(s) 111, 1713
Msp20I TGGCCA 4 cut(s) 282, 480, 1641, 1888
MspCI CTTAAG 1 cut(s) 1126
MspI CCGG 5 cut(s) 548, 795, 1577, 1733, 2796
MspR9I CCNGG 8 cut(s) 13, 205, 418, 1069, 1360, 1577, 2529, 2922
MunI CAATTG 3 cut(s) 885, 2091, 2098
Mva1269I GAATGC 4 cut(s) 67, 269, 1871, 2702
MvaI CCWGG 7 cut(s) 13, 205, 418, 1069, 1360, 2529, 2922
MwoI GCNNNNNNNGC 1 cut(s) 2560
NciI CCSGG 1 cut(s) 1577
NcoI CCATGG 1 cut(s) 1745
NlaIV GGNNCC 3 cut(s) 325, 546, 2543
NmuCI GTSAC 3 cut(s) 1049, 1362, 1476
NsiI ATGCAT 2 cut(s) 709, 2212
NspI RCATGY 2 cut(s) 711, 1786
PagI TCATGA 1 cut(s) 57
PaqCI CACCTGC 1 cut(s) 372
PciI ACATGT 1 cut(s) 1782
PctI GAATGC 4 cut(s) 67, 269, 1871, 2702
PfeI GAWTC 8 cut(s) 1064, 1332, 1512, 1933, 1951, 2524, 2630, 2834
PfoI TCCNGGA 1 cut(s) 1575
PinAI ACCGGT 1 cut(s) 794
PkrI GCNGC 3 cut(s) 67, 827, 1870
PleI GAGTC 3 cut(s) 1769, 2481, 2873
PpsI GAGTC 3 cut(s) 1769, 2481, 2873
PscI ACATGT 1 cut(s) 1782
PshAI GACNNNNGTC 1 cut(s) 3061
Psp6I CCWGG 7 cut(s) 11, 203, 416, 1067, 1358, 2527, 2920
PspFI CCCAGC 2 cut(s) 972, 2672
PspGI CCWGG 7 cut(s) 11, 203, 416, 1067, 1358, 2527, 2920
PspN4I GGNNCC 3 cut(s) 325, 546, 2543
PspPI GGNCC 5 cut(s) 1108, 1186, 1421, 2735, 2750
PstI CTGCAG 2 cut(s) 70, 369
PsuI RGATCY 5 cut(s) 175, 1609, 1615, 2638, 2667
RsaI GTAC 5 cut(s) 87, 657, 765, 1542, 2783
RsaNI GTAC 5 cut(s) 86, 656, 764, 1541, 2782
RseI CAYNNNNRTG 2 cut(s) 111, 1713
SatI GCNGC 3 cut(s) 66, 826, 1869
Sau96I GGNCC 5 cut(s) 1108, 1186, 1421, 2735, 2750
ScaI AGTACT 2 cut(s) 765, 1542
SchI GAGTC 3 cut(s) 1769, 2481, 2873
ScrFI CCNGG 8 cut(s) 13, 205, 418, 1069, 1360, 1577, 2529, 2922
SduI GDGCHC 1 cut(s) 2626
SfaNI GCATC 3 cut(s) 564, 2018, 2338
SfcI CTRYAG 5 cut(s) 66, 153, 365, 1009, 1979
SinI GGWCC 3 cut(s) 1186, 2735, 2750
SmiMI CAYNNNNRTG 2 cut(s) 111, 1713
SmlI CTYRAG 4 cut(s) 569, 1126, 2500, 2617
SmoI CTYRAG 4 cut(s) 569, 1126, 2500, 2617
SpeI ACTAGT 1 cut(s) 437
SsiI CCGC 2 cut(s) 2391, 2844
SspMI CTAG 4 cut(s) 144, 438, 593, 1544
StyD4I CCNGG 8 cut(s) 11, 203, 416, 1067, 1358, 1575, 2527, 2920
StyI CCWWGG 4 cut(s) 1529, 1745, 2785, 3059
TaaI ACNGT 6 cut(s) 655, 2000, 2181, 2344, 2434, 2757
TaiI ACGT 4 cut(s) 639, 925, 2399, 3034
TaqI TCGA 2 cut(s) 1947, 2709
TatI WGTACW 3 cut(s) 85, 763, 1540
TfiI GAWTC 8 cut(s) 1064, 1332, 1512, 1933, 1951, 2524, 2630, 2834
TscAI CASTG 5 cut(s) 658, 1054, 1803, 2149, 2593
TseFI GTSAC 3 cut(s) 1049, 1362, 1476
TseI GCWGC 3 cut(s) 65, 825, 1868
Tsp45I GTSAC 3 cut(s) 1049, 1362, 1476
TspGWI ACGGA 2 cut(s) 686, 3055
TspRI CASTG 5 cut(s) 658, 1054, 1803, 2149, 2593
Vha464I CTTAAG 1 cut(s) 1126
VpaK11BI GGWCC 3 cut(s) 1186, 2735, 2750
XagI CCTNNNNNAGG 2 cut(s) 208, 2013
XceI RCATGY 2 cut(s) 711, 1786
XcmI CCANNNNNNNNNTGG 1 cut(s) 1656
XmiI GTMKAC 4 cut(s) 874, 2299, 2364, 3034
XspI CTAG 4 cut(s) 144, 438, 593, 1544
ZrmI AGTACT 2 cut(s) 765, 1542
Zsp2I ATGCAT 2 cut(s) 709, 2212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.