RLG00000018865

Receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
38375141 .. 38381285
6145 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000018865

Sequence Viewer

Length: 3153 bp
ATGCTAGACCTATCTTTCAATGATTTCATGGGTTCTTCTATTTCTTTCAAGTTTGGTGGATTTGCAAGTATGACACACCTTCACCTTGCTGATTCCAACTTCACAGGCAAAATCCCTTCCGAAATCTCCCAGCTTTCCAAACTAGTTTCACTCAGGCTTTCTTCTGGATTATATTCTTTAAAGCCATATGAAAAAACAACAATAGACACGCTTAGCGTGAAAAGAATTGCTCAGAACCTTACCAGCCTTAGATTGCTCTCTCTCTATCTTGTTGACATGGCTTCAGTTGTACCTGATTCCTTCCTAAATTTATCTTCTTCTTTGACTTCAATTTCCCTCTGCTTTTGTAACTTGCATGGGAAGTTCCCAAAGACTCTATTCCACCTACCCAACCTTGAAGAACTTGACTTGGGTCAAAACACTAATCTCACAGGTTATACCCCCAAATCTAATTGGAGTAGTCCACTGAACTCCTTGAAACTCTCTGAGACTAAAATCTCAATAGATCTGCATTTCTTGACAAGCAGTTTGAAATCTTTGAGGTATTTGTCTCTTCGGGAGTGCAATTTTACAGGATCGCGCTCGCATCTTGAATTGTCTGGTAACCTCACACAACTCATGTTTTTGGATCTCTCTGGTAATAGTTTTGGTGGCCAGATACCATGGTCGCTTTTAAACCTTGAGCAACTCATTACCTTGGATCTTTCAAGCAACATGTTTGTGGGTGAGCTTCCAGAATTTCATGGTAATTCCACAAAAGCTTCTTCAACTTTGCATGATTCTTCAAAGCAACAACTTGGTGGTTCTATTCCTATGGGTTTGGTCCTACTCAGTTTGTATGACAACTTGCTTAGCGGAACAATACCATCTTGGGTATATTCTTTGCCATCTTTGGAATATTTGGTGCTCCAAAACAACGAATTCACTGGTAATATCAATGATTTCCAGTCTCTTTCCTTGTGGCATCTTGATTTAAGTTATAACAAGCTGCATGGCATGATTCCGAATTCAATCTATGGACTTGTGAAACTTAGCGAACTTGATATGTCCTCAAACAATTTGAGTGGCGTTGTGAAGTTTGAAAAGTTTCAAAATCTCCAAAGTCTCACCGATCTTCATCTTTCCTATAATCATCTAATGGTGAGTTTTCAGAATTTCAGTAATTATACATTTCCTGAACTTTCATCACTGCACATGTCTTGTTGCAAAATAACTCAGTTTCCATACTTCCTGAGAACCTCAACCCAATTAACATCCCTAGATCTTTCTGACAACCATATTCAAGGCAACGTTCCAACATGGGTGTTGGACGTGGGGAGAAATACATTGTCAGATTTTAATCTTTCTCACAATTTCTTGACGGGTACTATAGAACAATTTATGTGGAAGAACATAATCGTTCTTGACCTTAGCTCCAATTTGTTGAAAGGAAAACTTCCTATTCCATCACCTTCAACATACTTCTTTTTCATGTCGAACAATCAATTGACTGGAGCATTGCCATCCACCATTTGCAACCTGACTTCTGTCAAAGTAATTGATTTATCTAACAATAGCTTGAGTGGCAGAATTCCTCAATGTATAGGGAATTTCAGTCAAAAACTCTCAGTTTTGGATTTGCATATGAATCAATTTTGTGGCAGGATCCCTTCAACATTCCCAAAGGGAAACATCTTGAGGAATCTTAACCTTCATGGAAATCAGTTGGAAGGGACTCTGCCACAGTCTCTAGTCAATTGCAGAAAGATGGAAGTTCTAGACTTGGGAGACAACAAGCTAAACGATACTTTCCCAAATTGGTTAGAGTCTCTTCCCGAGTTACAGGTTCTCATCTTGAGATCTAATAGACTGTATGGTCCAATTGGTAGTCCCGAAACAAGATTTGCCTTCCGAAAATTGCGAATCATTGATCTCTCTTTCAATCAGTTTGGTGGCCCTTTGCCAACAAAGTACTTTCAGAAATTGGTGGCTATGAAAAACGTGCTAGATGATGAACTAAAGTACATGGGAGAGTACTATTACCAAGACACAGTCATAGTGGTAATGAAAGGCTTGAATATTAAACTAGTCAAAATACAAACTATGTTCACAACTATTGATTTTTCAAACAATAGTTTTAGAGGAGAGATTCCGGGGGTAATCGGCGAGCTCAAATCATTGAAGGGGCTTAACTTATCTAGTAATAAGCTTACAGGTCCAATTCCATCTGCCTTTAGTAGCTTGACTAATCTCGAATGGCTGGACATCTCCTCAAACATGCTTTCTGGTGAGATTCCAAGGCAACTAGCCAATTTGACGTCGCTTGAGAAGTTAAACCTATCAAGAAACCAGTTGGTTGGACCAATACCTCATGGTAATCAGTTTGATACATATGAAAATGATTCATACAGTGGAAATTTGGGGTTGTGTGGATATCCACTGTCTAAAGCATGTATCAACGGCGAAGCAGATGAACCACCTCAACCACCATCGTTTGATCAGCAAGGTGATGATATGAATGGATTTGATTGGAAAATAGTATGGATGGGTTATGGATGTGGAATGGTAATTGGATTATCTGTGGGATATATTGTTCTTTCCATTGGGAAAGTTGATCGGCGGGTAAGGATCATGGGAAGAGAAATAAGAAGAAAAATGGTGAAAAGGGCCAAGAAGACTAGTGTTGGAACTAGAAAGTGGATTATCTCATCTTTGTCTCGGGATCAGTTGATGAGCTCGGCGATTTTACAGCAGAGCTTAAATGTCCTTATTCCAGCTTTGAATCAGTCCTCAAATTATAGCATCGATTATCATGCAGGTACTCTGTTATGTCTTCCCCTCCCTAGAGCTGAAGCTATGTTTGTTGATCTAGGGCATTTCTCTGTACGAGCCATACAGATTGCCTTCTGTTTTGTGGTGTTCCCATGCCTCCTTTTTGCTTACATGGGTCAAGCTGCTTGTCTTATGAAATACCCTGATTCTTCTCATAGAATATTCTATGATTCTGTACCAGATAGTCTTTTTTGGCCAGTCATTGTGGTAGCCACACTTGCAGCGATGATTGCCAGCCAAGCAATGATATCTGCCACATTTTCATGTCCCGACTGTATTGAGTTATGTCTCCTTTCCTTGGTCCACTTCATGTTCTCACAATTGTGTGGGGAAGCCTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1051

Amino Acids

117.02

Weight (kDa)

6.88

Isoelectric Point (pI)

35.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 274 - 330 6.2e-07 Leucine rich repeat
LRR_8 PF13855 319 - 354 4.4e-06 Leucine rich repeat
LRR_8 PF13855 559 - 617 1.3e-08 Leucine rich repeat
LRR_8 PF13855 719 - 778 1.2e-10 Leucine rich repeat
LRR_4 PF12799 742 - 782 8.9e-06 Leucine Rich repeats (2 copies)
K_trans PF02705 939 - 1026 4e-31 K+ potassium transporter integral membrane domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 981
AasI GACNNNNNNGTC 1 cut(s) 1854
AatII GACGTC 1 cut(s) 2300
Acc36I ACCTGC 1 cut(s) 2786
AccII CGCG 1 cut(s) 580
AciI CCGC 2 cut(s) 855, 2599
AclI AACGTT 1 cut(s) 1290
AclWI GGATC 7 cut(s) 583, 636, 708, 1639, 1652, 2615, 2709
AcoI YGGCCR 2 cut(s) 652, 3005
AcsI RAATTY 8 cut(s) 307, 737, 920, 1006, 1153, 1569, 1588, 2395
AcuI CTGAAG 2 cut(s) 267, 2850
AcyI GRCGYC 1 cut(s) 2297
AfaI GTAC 8 cut(s) 291, 1366, 1952, 2003, 2015, 2800, 2865, 2988
AfiI CCNNNNNNNGG 1 cut(s) 3109
AflIII ACRYGT 2 cut(s) 714, 1194
AhlI ACTAGT 3 cut(s) 142, 2065, 2657
AjiI CACGTC 1 cut(s) 1312
AleI CACNNNNGTG 1 cut(s) 3133
AloI GAACNNNNNNTCC 2 cut(s) 2556, 2588
Alw21I GWGCWC 3 cut(s) 909, 2151, 2717
Alw26I GTCTC 9 cut(s) 482, 555, 954, 1109, 1731, 1761, 1812, 2700, 3104
AlwI GGATC 7 cut(s) 583, 636, 708, 1639, 1652, 2615, 2709
Ama87I CYCGRG 2 cut(s) 1814, 2697
AoxI GGCC 4 cut(s) 652, 1933, 2646, 3005
ApeKI GCWGC 3 cut(s) 988, 2933, 3032
ApoI RAATTY 8 cut(s) 307, 737, 920, 1006, 1153, 1569, 1588, 2395
ArsI GACNNNNNNTTYG 2 cut(s) 511, 543
Asp700I GAANNNNTTC 1 cut(s) 1086
AspLEI GCGC 1 cut(s) 582
AspS9I GGNCC 7 cut(s) 823, 1856, 1934, 2195, 2339, 2646, 3112
AsuC2I CCSGG 1 cut(s) 2133
AsuHPI GGTGA 8 cut(s) 74, 737, 1099, 1153, 1440, 2279, 2498, 2650
AvaI CYCGRG 2 cut(s) 1814, 2697
AvaII GGWCC 5 cut(s) 823, 1856, 2195, 2339, 3112
BaeI ACNNNNGTAYC 2 cut(s) 650, 683
BalI TGGCCA 2 cut(s) 654, 3007
BamHI GGATCC 1 cut(s) 1644
BanII GRGCYC 2 cut(s) 2151, 2717
BbsI GAAGAC 2 cut(s) 2660, 2804
Bbv12I GWGCWC 3 cut(s) 909, 2151, 2717
BbvI GCAGC 3 cut(s) 975, 2920, 3044
BccI CCATC 8 cut(s) 874, 895, 1453, 1510, 1741, 2212, 2476, 2518
BceAI ACGGC 1 cut(s) 2455
BcgI CGANNNNNNTGC 2 cut(s) 2774, 2808
BclI TGATCA 1 cut(s) 2476
BcnI CCSGG 1 cut(s) 2133
BcoDI GTCTC 9 cut(s) 482, 555, 954, 1109, 1731, 1761, 1812, 2700, 3104
BcuI ACTAGT 3 cut(s) 142, 2065, 2657
BfmI CTRYAG 1 cut(s) 1368
BfuAI ACCTGC 1 cut(s) 2786
BglII AGATCT 3 cut(s) 505, 1261, 1838
BisI GCNGC 3 cut(s) 989, 2934, 3033
BlpI GCTNAGC 2 cut(s) 212, 851
BlsI GCNGC 3 cut(s) 990, 2935, 3034
BmcAI AGTACT 2 cut(s) 1952, 2015
Bme1390I CCNGG 1 cut(s) 2133
Bme18I GGWCC 5 cut(s) 823, 1856, 2195, 2339, 3112
BmeT110I CYCGRG 2 cut(s) 1814, 2697
BmgBI CACGTC 1 cut(s) 1312
BmgT120I GGNCC 7 cut(s) 823, 1856, 1934, 2195, 2339, 2646, 3112
BmiI GGNNCC 1 cut(s) 1646
BmrFI CCNGG 1 cut(s) 2133
BmsI GCATC 3 cut(s) 595, 973, 2790
BoxI GACNNNNGTC 2 cut(s) 411, 1526
BpiI GAAGAC 2 cut(s) 2660, 2804
BpmI CTGGAG 1 cut(s) 1512
Bpu10I CCTNAGC 1 cut(s) 1409
Bpu1102I GCTNAGC 2 cut(s) 212, 851
BpuEI CTTGAG 5 cut(s) 701, 1579, 1696, 1855, 2324
BpuMI CCSGG 1 cut(s) 2133
Bsa29I ATCGAT 1 cut(s) 2784
BsaBI GATNNNNATC 2 cut(s) 1116, 1338
BsaHI GRCGYC 1 cut(s) 2297
BsaJI CCNNGG 5 cut(s) 662, 696, 2132, 2276, 3108
BsaXI ACNNNNNCTCC 2 cut(s) 1397, 1427
Bsc4I CCNNNNNNNGG 1 cut(s) 3109
Bse1I ACTGG 5 cut(s) 931, 946, 1495, 2329, 3008
Bse3DI GCAATG 2 cut(s) 1496, 3060
Bse8I GATNNNNATC 2 cut(s) 1116, 1338
BseCI ATCGAT 1 cut(s) 2784
BseDI CCNNGG 5 cut(s) 662, 696, 2132, 2276, 3108
BseGI GGATG 4 cut(s) 1253, 1502, 2529, 2540
BseJI GATNNNNATC 2 cut(s) 1116, 1338
BseLI CCNNNNNNNGG 1 cut(s) 3109
BseMI GCAATG 2 cut(s) 1496, 3060
BseMII CTCAG 7 cut(s) 166, 245, 477, 844, 1223, 1229, 1620
BseNI ACTGG 5 cut(s) 931, 946, 1495, 2329, 3008
BseRI GAGGAG 2 cut(s) 2136, 2239
BseXI GCAGC 3 cut(s) 975, 2920, 3044
BseYI CCCAGC 1 cut(s) 129
BsgI GTGCAG 1 cut(s) 1175
Bsh1236I CGCG 1 cut(s) 580
BshFI GGCC 4 cut(s) 654, 1935, 2648, 3007
BshVI ATCGAT 1 cut(s) 2784
BsiHKAI GWGCWC 3 cut(s) 909, 2151, 2717
BsiHKCI CYCGRG 2 cut(s) 1814, 2697
BsiSI CCGG 1 cut(s) 2132
BslFI GGGAC 3 cut(s) 1726, 1854, 3063
BslI CCNNNNNNNGG 1 cut(s) 3109
BsmAI GTCTC 9 cut(s) 482, 555, 954, 1109, 1731, 1761, 1812, 2700, 3104
BsmFI GGGAC 3 cut(s) 1726, 1854, 3063
BsnI GGCC 4 cut(s) 654, 1935, 2648, 3007
BsoBI CYCGRG 2 cut(s) 1814, 2697
Bsp1286I GDGCHC 3 cut(s) 909, 2151, 2717
Bsp1720I GCTNAGC 2 cut(s) 212, 851
Bsp19I CCATGG 1 cut(s) 662
BspACI CCGC 2 cut(s) 855, 2599
BspANI GGCC 4 cut(s) 654, 1935, 2648, 3007
BspCNI CTCAG 7 cut(s) 165, 244, 478, 843, 1224, 1228, 1619
BspDI ATCGAT 1 cut(s) 2784
BspFNI CGCG 1 cut(s) 580
BspLI GGNNCC 1 cut(s) 1646
BspMI ACCTGC 1 cut(s) 2786
BspPI GGATC 7 cut(s) 583, 636, 708, 1639, 1652, 2615, 2709
BsrDI GCAATG 2 cut(s) 1496, 3060
BsrI ACTGG 5 cut(s) 931, 946, 1495, 2329, 3008
BssECI CCNNGG 5 cut(s) 662, 696, 2132, 2276, 3108
BssNI GRCGYC 1 cut(s) 2297
BssT1I CCWWGG 4 cut(s) 662, 696, 2276, 3108
Bst4CI ACNGT 6 cut(s) 1725, 1851, 2032, 2390, 2421, 3086
Bst6I CTCTTC 3 cut(s) 558, 1815, 2611
BstACI GRCGYC 1 cut(s) 2297
BstC8I GCNNGC 3 cut(s) 584, 2147, 3046
BstDSI CCRYGG 1 cut(s) 662
BstEII GGTNACC 1 cut(s) 602
BstF5I GGATG 4 cut(s) 1253, 1502, 2529, 2540
BstFNI CGCG 1 cut(s) 580
BstHHI GCGC 1 cut(s) 582
BstMAI GTCTC 9 cut(s) 482, 555, 954, 1109, 1731, 1761, 1812, 2700, 3104
BstMWI GCNNNNNNNGC 4 cut(s) 1563, 3029, 3041, 3050
BstNSI RCATGY 4 cut(s) 718, 1198, 2260, 2433
BstPAI GACNNNNGTC 2 cut(s) 411, 1526
BstPI GGTNACC 1 cut(s) 602
BstSCI CCNGG 1 cut(s) 2131
BstSFI CTRYAG 1 cut(s) 1368
BstUI CGCG 1 cut(s) 580
BstV1I GCAGC 3 cut(s) 975, 2920, 3044
BstV2I GAAGAC 2 cut(s) 2660, 2804
BstX2I RGATCY 6 cut(s) 505, 628, 700, 1261, 1644, 1838
BstXI CCANNNNNNTGG 1 cut(s) 2336
BstYI RGATCY 6 cut(s) 505, 628, 700, 1261, 1644, 1838
Bsu15I ATCGAT 1 cut(s) 2784
BsuRI GGCC 4 cut(s) 654, 1935, 2648, 3007
BsuTUI ATCGAT 1 cut(s) 2784
BtgI CCRYGG 1 cut(s) 662
BtgZI GCGATG 1 cut(s) 3050
BtrI CACGTC 1 cut(s) 1312
BtsCI GGATG 4 cut(s) 1253, 1502, 2529, 2540
BtsI GCAGTG 1 cut(s) 1187
BtsIMutI CAGTG 5 cut(s) 464, 924, 1187, 2395, 2417
BveI ACCTGC 1 cut(s) 2786
Cac8I GCNNGC 3 cut(s) 584, 2147, 3046
CfoI GCGC 1 cut(s) 582
Cfr13I GGNCC 7 cut(s) 823, 1856, 1934, 2195, 2339, 2646, 3112
ClaI ATCGAT 1 cut(s) 2784
Csp6I GTAC 8 cut(s) 290, 1365, 1951, 2002, 2014, 2799, 2864, 2987
CspCI CAANNNNNGTGG 6 cut(s) 37, 72, 1045, 1080, 1364, 1399
CviQI GTAC 8 cut(s) 290, 1365, 1951, 2002, 2014, 2799, 2864, 2987
DraI TTTAAA 2 cut(s) 180, 675
DrdI GACNNNNNNGTC 1 cut(s) 1854
DseDI GACNNNNNNGTC 1 cut(s) 1854
EaeI YGGCCR 2 cut(s) 652, 3005
Eam1104I CTCTTC 3 cut(s) 558, 1815, 2611
EarI CTCTTC 3 cut(s) 558, 1815, 2611
Ecl136II GAGCTC 2 cut(s) 2149, 2715
Eco130I CCWWGG 4 cut(s) 662, 696, 2276, 3108
Eco24I GRGCYC 2 cut(s) 2151, 2717
Eco32I GATATC 2 cut(s) 2414, 3060
Eco47I GGWCC 5 cut(s) 823, 1856, 2195, 2339, 3112
Eco53kI GAGCTC 2 cut(s) 2149, 2715
Eco57I CTGAAG 2 cut(s) 267, 2850
Eco88I CYCGRG 2 cut(s) 1814, 2697
Eco91I GGTNACC 1 cut(s) 602
EcoICRI GAGCTC 2 cut(s) 2149, 2715
EcoO65I GGTNACC 1 cut(s) 602
EcoRI GAATTC 3 cut(s) 920, 1006, 1569
EcoRV GATATC 2 cut(s) 2414, 3060
EcoT14I CCWWGG 4 cut(s) 662, 696, 2276, 3108
EcoT38I GRGCYC 2 cut(s) 2151, 2717
ErhI CCWWGG 4 cut(s) 662, 696, 2276, 3108
FalI AAGNNNNNCTT 2 cut(s) 1419, 1451
FaqI GGGAC 3 cut(s) 1726, 1854, 3063
FauI CCCGC 1 cut(s) 2592
FauNDI CATATG 3 cut(s) 187, 1623, 2371
FbaI TGATCA 1 cut(s) 2476
Fnu4HI GCNGC 3 cut(s) 989, 2934, 3033
FokI GGATG 4 cut(s) 1240, 1489, 2536, 2547
FriOI GRGCYC 2 cut(s) 2151, 2717
Fsp4HI GCNGC 3 cut(s) 989, 2934, 3033
GlaI GCGC 1 cut(s) 581
GluI GCNGC 3 cut(s) 989, 2934, 3033
GsaI CCCAGC 1 cut(s) 133
GsuI CTGGAG 1 cut(s) 1512
HaeIII GGCC 4 cut(s) 654, 1935, 2648, 3007
HapII CCGG 1 cut(s) 2132
HhaI GCGC 1 cut(s) 582
Hin1I GRCGYC 1 cut(s) 2297
Hin6I GCGC 1 cut(s) 580
HinP1I GCGC 1 cut(s) 580
HincII GTYRAC 1 cut(s) 274
HindII GTYRAC 1 cut(s) 274
HindIII AAGCTT 2 cut(s) 759, 2186
HpaII CCGG 1 cut(s) 2132
HphI GGTGA 8 cut(s) 74, 737, 1099, 1153, 1440, 2279, 2498, 2650
Hpy166II GTNNAC 4 cut(s) 274, 464, 2088, 3115
Hpy188I TCNGA 9 cut(s) 121, 234, 487, 1005, 1152, 1270, 1333, 1892, 1959
Hpy8I GTNNAC 4 cut(s) 274, 464, 2088, 3115
Hpy99I CGWCG 1 cut(s) 2302
HpyCH4III ACNGT 6 cut(s) 1725, 1851, 2032, 2390, 2421, 3086
HpyCH4IV ACGT 4 cut(s) 1290, 1311, 1980, 2297
HpyF10VI GCNNNNNNNGC 4 cut(s) 1563, 3029, 3041, 3050
HpySE526I ACGT 4 cut(s) 1290, 1311, 1980, 2297
Hsp92I GRCGYC 1 cut(s) 2297
HspAI GCGC 1 cut(s) 580
Ksp22I TGATCA 1 cut(s) 2476
LmnI GCTCC 3 cut(s) 912, 1418, 1493
Lsp1109I GCAGC 3 cut(s) 975, 2920, 3044
LweI GCATC 3 cut(s) 595, 973, 2790
MaeII ACGT 4 cut(s) 1290, 1311, 1980, 2297
MaeIII GTNAC 3 cut(s) 347, 602, 1818
MfeI CAATTG 4 cut(s) 1484, 1735, 1860, 3131
MflI RGATCY 6 cut(s) 505, 628, 700, 1261, 1644, 1838
MhlI GDGCHC 3 cut(s) 909, 2151, 2717
MlsI TGGCCA 2 cut(s) 654, 3007
MluNI TGGCCA 2 cut(s) 654, 3007
MlyI GAGTC 3 cut(s) 367, 1708, 1814
MmeI TCCRAC 6 cut(s) 120, 1287, 1319, 1686, 2317, 2644
Mox20I TGGCCA 2 cut(s) 654, 3007
MroXI GAANNNNTTC 1 cut(s) 1086
MscI TGGCCA 2 cut(s) 654, 3007
MslI CAYNNNNRTG 3 cut(s) 719, 3073, 3133
Msp20I TGGCCA 2 cut(s) 654, 3007
MspI CCGG 1 cut(s) 2132
MspR9I CCNGG 1 cut(s) 2133
MunI CAATTG 4 cut(s) 1484, 1735, 1860, 3131
MvnI CGCG 1 cut(s) 580
MwoI GCNNNNNNNGC 4 cut(s) 1563, 3029, 3041, 3050
NciI CCSGG 1 cut(s) 2133
NcoI CCATGG 1 cut(s) 662
NdeI CATATG 3 cut(s) 187, 1623, 2371
NlaIV GGNNCC 1 cut(s) 1646
NmeAIII GCCGAG 1 cut(s) 2696
NspI RCATGY 4 cut(s) 718, 1198, 2260, 2433
OliI CACNNNNGTG 1 cut(s) 3133
PciI ACATGT 2 cut(s) 714, 1194
PdmI GAANNNNTTC 1 cut(s) 1086
PflFI GACNNNGTC 1 cut(s) 2030
PkrI GCNGC 3 cut(s) 990, 2935, 3034
PleI GAGTC 3 cut(s) 367, 1708, 1813
PpsI GAGTC 3 cut(s) 367, 1708, 1813
PscI ACATGT 2 cut(s) 714, 1194
PshAI GACNNNNGTC 2 cut(s) 411, 1526
PsiI TTATAA 1 cut(s) 981
Psp124BI GAGCTC 2 cut(s) 2151, 2717
Psp1406I AACGTT 1 cut(s) 1290
PspEI GGTNACC 1 cut(s) 602
PspFI CCCAGC 1 cut(s) 129
PspN4I GGNNCC 1 cut(s) 1646
PspPI GGNCC 7 cut(s) 823, 1856, 1934, 2195, 2339, 2646, 3112
PsuI RGATCY 6 cut(s) 505, 628, 700, 1261, 1644, 1838
PsyI GACNNNGTC 1 cut(s) 2030
RsaI GTAC 8 cut(s) 291, 1366, 1952, 2003, 2015, 2800, 2865, 2988
RsaNI GTAC 8 cut(s) 290, 1365, 1951, 2002, 2014, 2799, 2864, 2987
RseI CAYNNNNRTG 3 cut(s) 719, 3073, 3133
SacI GAGCTC 2 cut(s) 2151, 2717
SatI GCNGC 3 cut(s) 989, 2934, 3033
Sau96I GGNCC 7 cut(s) 823, 1856, 1934, 2195, 2339, 2646, 3112
ScaI AGTACT 2 cut(s) 1952, 2015
SchI GAGTC 3 cut(s) 367, 1708, 1814
ScrFI CCNGG 1 cut(s) 2133
SduI GDGCHC 3 cut(s) 909, 2151, 2717
SfaNI GCATC 3 cut(s) 595, 973, 2790
SfcI CTRYAG 1 cut(s) 1368
SinI GGWCC 5 cut(s) 823, 1856, 2195, 2339, 3112
SmiMI CAYNNNNRTG 3 cut(s) 719, 3073, 3133
SmlI CTYRAG 5 cut(s) 680, 1558, 1675, 1834, 2303
SmoI CTYRAG 5 cut(s) 680, 1558, 1675, 1834, 2303
SpeI ACTAGT 3 cut(s) 142, 2065, 2657
SsiI CCGC 2 cut(s) 855, 2599
SspI AATATT 3 cut(s) 899, 2059, 2973
SstI GAGCTC 2 cut(s) 2151, 2717
StyD4I CCNGG 1 cut(s) 2131
StyI CCWWGG 4 cut(s) 662, 696, 2276, 3108
TaaI ACNGT 6 cut(s) 1725, 1851, 2032, 2390, 2421, 3086
TaiI ACGT 4 cut(s) 1293, 1314, 1983, 2300
TaqI TCGA 3 cut(s) 1475, 2232, 2784
TatI WGTACW 3 cut(s) 1950, 2001, 2013
TscAI CASTG 5 cut(s) 471, 931, 1194, 2395, 2424
TseI GCWGC 3 cut(s) 988, 2933, 3032
TspRI CASTG 5 cut(s) 471, 931, 1194, 2395, 2424
Tth111I GACNNNGTC 1 cut(s) 2030
VpaK11BI GGWCC 5 cut(s) 823, 1856, 2195, 2339, 3112
XapI RAATTY 8 cut(s) 307, 737, 920, 1006, 1153, 1569, 1588, 2395
XbaI TCTAGA 1 cut(s) 1756
XceI RCATGY 4 cut(s) 718, 1198, 2260, 2433
XmnI GAANNNNTTC 1 cut(s) 1086
ZraI GACGTC 1 cut(s) 2298
ZrmI AGTACT 2 cut(s) 1952, 2015
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.