Rw5G049870

receptor-like protein 12

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
86460304 .. 86461170
867 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G049870.1

Sequence Viewer

Length: 867 bp
ATGAGGAATAGTGGGTTCCACGGTGCTATTCCGAGACATCAAAGCAATCATGATTGTTTCCCCAATTTGCGCATCCTTGATCTGTCTCATAATAATTTTACCGGTCAGTTTGCATTTCAATTCATCCTCTCTGGAGAATCAATGAGAGGTATCCATCTAAACGGATCGGAGTACATGACAACATTTGGATTCACCATTTTTGACAACCGGCAAGATTGGTATCTTATGGCTAGTTACAGTTATGAGTACTCAATCACGCTGATGAATAAAGGTTTAGAGAGATACTTCCAAAAGATTCGTGAAGACTTTATGGCCGTCGATCTGTCGAGCAATAGATTTGAAGGCAAGATTCCAGAATTTATTGGGAACCTAAAGGGGCTTCGCTCACTTAATGTATCCAGTAACATTCTAAGTGGCCGCATCCCACCATCCTTGGGGAACTTGACAAATCTTGAAGCTTTGGACCTTTCACATAACAACTTCTTGGGTGAGATTCCTCCATCACTGTTGCAGCTTTCATTCCTCCAAAAATTCAGCGTCTCGCACAACAATCTCACAGGTCAAATACCGGTTGGAAACCAGTTCAGTACCTTCGACATCACTTCATATGAGGGTAACCCAGGTTTGTGTGGATCTCCATTGCCAAAGAAATGTTCACGTCCCGAGGGGCCTGAACTCCCACCTTCAACAGCAGAAGAAGATGGAGTTGAGTTGGATTGGAAATTTGCTGCGGCGGGGTTAGTGAGTGGGTTGGTGGTCGGAGTTGTTCTTGTAGACTTTGTGATCACGAGGTTCAGTGAGCGGTTCATTGAGATTGTAGCATTGCTGATCAGACTGATGAAAAGGATGAGAAGGCCCAGAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

288

Amino Acids

32.39

Weight (kDa)

6.66

Isoelectric Point (pI)

42.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 106 - 161 2e-07 Leucine rich repeat
LRR_LRWD1 PF23211 125 - 211 8.2e-06 Leucine-rich repeat and WD repeat-containing protein 1, LRR
LRR_4 PF12799 126 - 167 2.6e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 71
AccBSI CCGCTC 1 cut(s) 802
AccI GTMKAC 1 cut(s) 774
AciI CCGC 4 cut(s) 418, 731, 734, 802
AclWI GGATC 2 cut(s) 172, 640
AcoI YGGCCR 2 cut(s) 312, 415
AcsI RAATTY 3 cut(s) 356, 530, 722
AfaI GTAC 3 cut(s) 173, 248, 589
AfiI CCNNNNNNNGG 1 cut(s) 434
AgeI ACCGGT 2 cut(s) 101, 568
AgsI TTSAA 4 cut(s) 119, 341, 455, 687
AjiI CACGTC 1 cut(s) 659
AjnI CCWGG 1 cut(s) 619
AjuI GAANNNNNNNTTGG 2 cut(s) 637, 669
AluBI AGCT 2 cut(s) 458, 514
AluI AGCT 2 cut(s) 458, 514
Alw26I GTCTC 3 cut(s) 28, 90, 544
AlwI GGATC 2 cut(s) 172, 640
Ama87I CYCGRG 1 cut(s) 662
AoxI GGCC 4 cut(s) 312, 415, 668, 854
ApeKI GCWGC 2 cut(s) 511, 728
ApoI RAATTY 3 cut(s) 356, 530, 722
AsiGI ACCGGT 2 cut(s) 101, 568
AspLEI GCGC 1 cut(s) 72
AspS9I GGNCC 3 cut(s) 463, 668, 855
AsuHPI GGTGA 2 cut(s) 184, 500
AvaI CYCGRG 1 cut(s) 662
AvaII GGWCC 1 cut(s) 463
BauI CACGAG 1 cut(s) 787
BbsI GAAGAC 1 cut(s) 309
BbvI GCAGC 2 cut(s) 523, 715
BccI CCATC 4 cut(s) 162, 436, 508, 695
BceAI ACGGC 1 cut(s) 299
BciT130I CCWGG 1 cut(s) 621
BciVI GTATCC 2 cut(s) 161, 406
BclI TGATCA 2 cut(s) 783, 828
BcoDI GTCTC 3 cut(s) 28, 90, 544
BfaI CTAG 1 cut(s) 231
BfuI GTATCC 2 cut(s) 161, 406
BisI GCNGC 4 cut(s) 418, 512, 729, 732
BlsI GCNGC 4 cut(s) 419, 513, 730, 733
BmcAI AGTACT 1 cut(s) 248
Bme1390I CCNGG 1 cut(s) 621
Bme18I GGWCC 1 cut(s) 463
BmeT110I CYCGRG 1 cut(s) 662
BmgBI CACGTC 1 cut(s) 659
BmgT120I GGNCC 3 cut(s) 463, 668, 855
BmiI GGNNCC 3 cut(s) 17, 368, 669
BmrFI CCNGG 1 cut(s) 621
BmsI GCATC 2 cut(s) 81, 429
BpiI GAAGAC 1 cut(s) 309
BpmI CTGGAG 1 cut(s) 153
BsaBI GATNNNNATC 1 cut(s) 219
BsaJI CCNNGG 4 cut(s) 19, 432, 619, 663
BsaWI WCCGGW 2 cut(s) 101, 568
Bsc4I CCNNNNNNNGG 1 cut(s) 434
Bse118I RCCGGY 3 cut(s) 101, 207, 568
Bse1I ACTGG 2 cut(s) 399, 580
Bse3DI GCAATG 2 cut(s) 638, 821
Bse8I GATNNNNATC 1 cut(s) 219
BseBI CCWGG 1 cut(s) 621
BseDI CCNNGG 4 cut(s) 19, 432, 619, 663
BseGI GGATG 5 cut(s) 72, 123, 420, 428, 852
BseJI GATNNNNATC 1 cut(s) 219
BseLI CCNNNNNNNGG 1 cut(s) 434
BseMI GCAATG 2 cut(s) 638, 821
BseNI ACTGG 2 cut(s) 399, 580
BseXI GCAGC 2 cut(s) 523, 715
BshFI GGCC 4 cut(s) 314, 417, 670, 856
BshTI ACCGGT 2 cut(s) 101, 568
BsiHKCI CYCGRG 1 cut(s) 662
BsiSI CCGG 3 cut(s) 102, 208, 569
BslFI GGGAC 1 cut(s) 645
BslI CCNNNNNNNGG 1 cut(s) 434
BsmAI GTCTC 3 cut(s) 28, 90, 544
BsmBI CGTCTC 1 cut(s) 544
BsmFI GGGAC 1 cut(s) 645
BsnI GGCC 4 cut(s) 314, 417, 670, 856
BsoBI CYCGRG 1 cut(s) 662
Bsp143I GATC 6 cut(s) 79, 164, 319, 632, 783, 828
BspACI CCGC 4 cut(s) 418, 731, 734, 802
BspANI GGCC 4 cut(s) 314, 417, 670, 856
BspHI TCATGA 1 cut(s) 49
BspLI GGNNCC 3 cut(s) 17, 368, 669
BspPI GGATC 2 cut(s) 172, 640
BsrBI CCGCTC 1 cut(s) 802
BsrDI GCAATG 2 cut(s) 638, 821
BsrFI RCCGGY 3 cut(s) 101, 207, 568
BsrI ACTGG 2 cut(s) 399, 580
BssAI RCCGGY 3 cut(s) 101, 207, 568
BssECI CCNNGG 4 cut(s) 19, 432, 619, 663
BssMI GATC 6 cut(s) 79, 164, 319, 632, 783, 828
BssSI CACGAG 1 cut(s) 787
BssT1I CCWWGG 1 cut(s) 432
Bst2BI CACGAG 1 cut(s) 787
Bst2UI CCWGG 1 cut(s) 621
Bst4CI ACNGT 3 cut(s) 23, 239, 507
BstDEI CTNAG 1 cut(s) 410
BstDSI CCRYGG 1 cut(s) 19
BstEII GGTNACC 1 cut(s) 614
BstF5I GGATG 5 cut(s) 72, 123, 420, 428, 852
BstHHI GCGC 1 cut(s) 72
BstKTI GATC 6 cut(s) 82, 167, 322, 635, 786, 831
BstMAI GTCTC 3 cut(s) 28, 90, 544
BstMBI GATC 6 cut(s) 79, 164, 319, 632, 783, 828
BstNI CCWGG 1 cut(s) 621
BstPI GGTNACC 1 cut(s) 614
BstSCI CCNGG 1 cut(s) 619
BstV1I GCAGC 2 cut(s) 523, 715
BstV2I GAAGAC 1 cut(s) 309
BstX2I RGATCY 1 cut(s) 632
BstYI RGATCY 1 cut(s) 632
BsuI GTATCC 2 cut(s) 161, 406
BsuRI GGCC 4 cut(s) 314, 417, 670, 856
BtgI CCRYGG 1 cut(s) 19
BtrI CACGTC 1 cut(s) 659
BtsCI GGATG 5 cut(s) 72, 123, 420, 428, 852
BtsIMutI CAGTG 2 cut(s) 503, 802
CciI TCATGA 1 cut(s) 49
CfoI GCGC 1 cut(s) 72
Cfr10I RCCGGY 3 cut(s) 101, 207, 568
Cfr13I GGNCC 3 cut(s) 463, 668, 855
CseI GACGC 1 cut(s) 526
Csp6I GTAC 3 cut(s) 172, 247, 588
CspAI ACCGGT 2 cut(s) 101, 568
CspCI CAANNNNNGTGG 2 cut(s) 414, 449
CviAII CATG 2 cut(s) 50, 175
CviJI RGCY 8 cut(s) 230, 314, 379, 417, 458, 514, 670, 856
CviKI_1 RGCY 8 cut(s) 230, 314, 379, 417, 458, 514, 670, 856
CviQI GTAC 3 cut(s) 172, 247, 588
DdeI CTNAG 1 cut(s) 410
DpnI GATC 6 cut(s) 81, 166, 321, 634, 785, 830
DpnII GATC 6 cut(s) 79, 164, 319, 632, 783, 828
EaeI YGGCCR 2 cut(s) 312, 415
Eco130I CCWWGG 1 cut(s) 432
Eco47I GGWCC 1 cut(s) 463
Eco88I CYCGRG 1 cut(s) 662
Eco91I GGTNACC 1 cut(s) 614
EcoO109I RGGNCCY 1 cut(s) 668
EcoO65I GGTNACC 1 cut(s) 614
EcoRII CCWGG 1 cut(s) 619
EcoT14I CCWWGG 1 cut(s) 432
ErhI CCWWGG 1 cut(s) 432
Esp3I CGTCTC 1 cut(s) 544
FaeI CATG 2 cut(s) 53, 178
FaiI YATR 9 cut(s) 51, 90, 176, 227, 243, 311, 474, 607, 609
FaqI GGGAC 1 cut(s) 645
FatI CATG 2 cut(s) 49, 174
FauI CCCGC 1 cut(s) 727
FauNDI CATATG 1 cut(s) 607
FbaI TGATCA 2 cut(s) 783, 828
FblI GTMKAC 1 cut(s) 774
Fnu4HI GCNGC 4 cut(s) 418, 512, 729, 732
FokI GGATG 5 cut(s) 59, 110, 407, 415, 859
Fsp4HI GCNGC 4 cut(s) 418, 512, 729, 732
FspBI CTAG 1 cut(s) 231
FspI TGCGCA 1 cut(s) 71
GlaI GCGC 1 cut(s) 71
GluI GCNGC 4 cut(s) 418, 512, 729, 732
GsuI CTGGAG 1 cut(s) 153
HaeIII GGCC 4 cut(s) 314, 417, 670, 856
HapII CCGG 3 cut(s) 102, 208, 569
HgaI GACGC 1 cut(s) 526
HhaI GCGC 1 cut(s) 72
Hin1II CATG 2 cut(s) 53, 178
Hin6I GCGC 1 cut(s) 70
HinP1I GCGC 1 cut(s) 70
HindIII AAGCTT 1 cut(s) 456
HinfI GANTC 5 cut(s) 137, 189, 295, 349, 493
HpaII CCGG 3 cut(s) 102, 208, 569
HphI GGTGA 2 cut(s) 184, 500
Hpy166II GTNNAC 2 cut(s) 656, 775
Hpy188I TCNGA 4 cut(s) 33, 169, 761, 833
Hpy188III TCNNGA 7 cut(s) 50, 132, 299, 353, 452, 662, 787
Hpy8I GTNNAC 2 cut(s) 656, 775
Hpy99I CGWCG 1 cut(s) 320
HpyAV CCTTC 4 cut(s) 335, 601, 693, 846
HpyCH4III ACNGT 3 cut(s) 23, 239, 507
HpyCH4IV ACGT 1 cut(s) 658
HpyCH4V TGCA 2 cut(s) 113, 511
HpyF3I CTNAG 1 cut(s) 410
HpySE526I ACGT 1 cut(s) 658
Hsp92II CATG 2 cut(s) 53, 178
HspAI GCGC 1 cut(s) 70
Ksp22I TGATCA 2 cut(s) 783, 828
Kzo9I GATC 6 cut(s) 79, 164, 319, 632, 783, 828
Lsp1109I GCAGC 2 cut(s) 523, 715
LweI GCATC 2 cut(s) 81, 429
MaeI CTAG 1 cut(s) 231
MaeII ACGT 1 cut(s) 658
MaeIII GTNAC 3 cut(s) 233, 401, 614
MalI GATC 6 cut(s) 81, 166, 321, 634, 785, 830
MbiI CCGCTC 1 cut(s) 802
MboI GATC 6 cut(s) 79, 164, 319, 632, 783, 828
MboII GAAGA 3 cut(s) 314, 707, 710
MflI RGATCY 1 cut(s) 632
MluCI AATT 6 cut(s) 64, 94, 119, 356, 530, 722
MmeI TCCRAC 3 cut(s) 553, 693, 739
MnlI CCTC 7 cut(s) 137, 140, 507, 533, 604, 658, 783
MseI TTAA 1 cut(s) 390
MslI CAYNNNNRTG 1 cut(s) 260
MspI CCGG 3 cut(s) 102, 208, 569
MspR9I CCNGG 1 cut(s) 621
MvaI CCWGG 1 cut(s) 621
NdeI CATATG 1 cut(s) 607
NdeII GATC 6 cut(s) 79, 164, 319, 632, 783, 828
NlaIII CATG 2 cut(s) 53, 178
NlaIV GGNNCC 3 cut(s) 17, 368, 669
NsbI TGCGCA 1 cut(s) 71
PagI TCATGA 1 cut(s) 49
PfeI GAWTC 5 cut(s) 137, 189, 295, 349, 493
PinAI ACCGGT 2 cut(s) 101, 568
PkrI GCNGC 4 cut(s) 419, 513, 730, 733
Psp6I CCWGG 1 cut(s) 619
PspEI GGTNACC 1 cut(s) 614
PspGI CCWGG 1 cut(s) 619
PspN4I GGNNCC 3 cut(s) 17, 368, 669
PspPI GGNCC 3 cut(s) 463, 668, 855
PsuI RGATCY 1 cut(s) 632
RsaI GTAC 3 cut(s) 173, 248, 589
RsaNI GTAC 3 cut(s) 172, 247, 588
RseI CAYNNNNRTG 1 cut(s) 260
SaqAI TTAA 1 cut(s) 390
SatI GCNGC 4 cut(s) 418, 512, 729, 732
Sau3AI GATC 6 cut(s) 79, 164, 319, 632, 783, 828
Sau96I GGNCC 3 cut(s) 463, 668, 855
ScaI AGTACT 1 cut(s) 248
ScrFI CCNGG 1 cut(s) 621
SfaNI GCATC 2 cut(s) 81, 429
SinI GGWCC 1 cut(s) 463
SmiMI CAYNNNNRTG 1 cut(s) 260
Sse9I AATT 6 cut(s) 64, 94, 119, 356, 530, 722
SsiI CCGC 4 cut(s) 418, 731, 734, 802
SspMI CTAG 1 cut(s) 231
StyD4I CCNGG 1 cut(s) 619
StyI CCWWGG 1 cut(s) 432
TaaI ACNGT 3 cut(s) 23, 239, 507
TaiI ACGT 1 cut(s) 661
TaqI TCGA 3 cut(s) 318, 326, 594
TasI AATT 6 cut(s) 64, 94, 119, 356, 530, 722
TatI WGTACW 2 cut(s) 171, 246
TauI GCSGC 2 cut(s) 420, 734
TfiI GAWTC 5 cut(s) 137, 189, 295, 349, 493
Tru1I TTAA 1 cut(s) 390
Tru9I TTAA 1 cut(s) 390
TscAI CASTG 2 cut(s) 510, 802
TseI GCWGC 2 cut(s) 511, 728
TspDTI ATGAA 6 cut(s) 112, 278, 507, 594, 796, 854
TspGWI ACGGA 1 cut(s) 177
TspRI CASTG 2 cut(s) 510, 802
VpaK11BI GGWCC 1 cut(s) 463
XapI RAATTY 3 cut(s) 356, 530, 722
XmiI GTMKAC 1 cut(s) 774
XspI CTAG 1 cut(s) 231
ZrmI AGTACT 1 cut(s) 248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.