RchiOBHm_Chr2g0173751

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000024
Physical Location & Seq
Forward (+)
86618792 .. 86621482
2691 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54094

Sequence Viewer

Length: 2691 bp
ATGGGGTCATCCTTGTGTGTGCTTTCAATACTAGTACTAGTTGTGTTATCGTTTCATTTTGTGGTTGCAAACTCATCACGCTCTTTGCAGCAGCCATCTTGCCATGATGAGGAGAGCTCTGCCATGCTCAAGTTCAAGCAAAGCCTTGTCAGTGACCTATCTGCTTCAAATGTTAGCAATGGTGCTTATTCGAAGGTTTCAACATGGAAACCACCTCTGCAAGGAGAAAACAAGACATGCTGCTCATGGGCCGGGGTTGAGTGTGATGAGAAGACAGGTCATGTAATTGGGCTTGATCTCAGTAGTAGTTTGCTCTATGGCTCTATCAACTCCAACAGCACCCTCTTCCGCCTTGTTCATCTTGAGAGGCTCAACCTTGCTGACAATAATTTCAATTCCTCACAAATTCCTCCTACCATTAGGAACTTTCCAAGACTCAGGTATCTCAATCTCTCTATGTCGGGCTTTTCTGGTCATGCCTCATCTGAAGTTTCACAGTTGTCTCAGTTGACATCCCTTGATTTATCTCAAAATTTTATGTTTTCAGACGAAAGATTCTTGAGAAGTCTAGCTCAAAACTTAACTAGCCTAGAAATACTTGATCTTACTTACATGAATATATCATCCACAGTCCCCGACACCTTGGCCAATTTGTCACATTTGACATCCCTCTCCCTTCGAACTTGCGGCCTGTTCGGCAAATTACCATTTTCTCTTAGTAATATTAGACATCTCATCTATTTGGACCTTGGAGATAATAAATTTACTGGTCAAATCTCTGCAGCCTTGGGAAGCCTTACCCAACTAACAGAACTTGGGCTTTATTCAAATCAATTGTCTGGCCCCATCCCTGCTTCCTTGGGAAACCTTACCCAACTAACAAAACTTAGGCTTTATTCGAATCAATTATCTAGCCCCATCCCTGCTTCCTTGGGAAACCTTACCCGACTAACAAAACTTGGCCTTCATAGTAATAATTTAAATGGTTCAATTCCTCAGTCCTTATTCAATCTCAGGAATCTCCAGTTCCTTTATCTAGAAAATAATACTTTGAGCGGTACGGTAGAGTTCCATGAGTTTGTTAAGCTACAAGAGCTCACCTCTCTAGATCTATCAAGTAATAATCTGGAACTCACAGAATCCAAATCTTTGAATAATGCAACTACTGCAGTTCCAAAGTTTGAGTATCTAAGATTGAGTTGGTGCAACATAAGAGAGTTCCCAAGTTTCCTAAGATCTCAAATGACATTGATTATGTTGGATCTTTCTGGAAACAAATTGCAGGGCCAAGTGCCAAAATGGATATGGAACACAAGCACACAAACTCTACGGGCGTTGAACATTTCTCATAACTTTCTATCAGGCTTTGTGCAATCTCCAGTTGTTCTTCCATGGGCTAACCTAAAAATGTTAGACCTTTCATTCAACGTGCTTTGTGAATTATTATTCTTACCTTCAGCTGCATCCATCAGATACTATAACATTGCAAACAACAAATTAACCGGACAAGTTTTGCCAATGATTTGCAATTTGACTTCTCTTGAATACCTTGATTTGTCAAACAACAAGTTGATTGGCGACCTACCGCAGTGTGGGGAAAATTTTAGTGTTCAAATGAAATATCTCAAACTTGGAAACAACTCATTTCATGGAATTTTTCCTCAATCTTACACCAATGGAAGCAGTTTAAGGATGATGGATATTAGCCACAACAATTTCCATGGGCAACTACCGAGGTCACTAGCGAATTGTGCAAGTCTTGAAATTTTAGTCGTTTCACACAATAAATTTAATGATACATTCCCCGTTTGGTTAGGGGTTGTCCCTGAGTTGAAAATTTTGACAATGGACCACAATATGTTCTATGGAGTGATTGTGAAACCTAATAAGAAGAATCTCACTTTCACAATGCTGCGTATTCTTGATTTGTCTTACAATAATTTCTCAGGTGAGTTTCCATTTGAAAACATTTTCTCTAGAAATGGGACAAGTATCACTGATGATTTTGGGTATTACTACACTGATGATTTGGTGTATTTTCGATCTGTTCGCTTGTATTACTCAATCACAATAATGAGTAAAGGTGTGGAGAGATACTACCCGAAAATTCAAGAGGACTTGATATTCATTGACATCTCAAGCAACAATTTTGAAGGGAAGATTCCTGAATTCATTGGGACACTAAGGGGGATTAGGTCGCTCAATATCTCCAATAACAGTCTCACCGATAGCATCCCCTCATCCTTGGGCAACTTATCAAGGCTTGAATCGTTGGATCTTTCACATAACAAGCTCTCTGGTGAGATTCCTCAGCAACTGGCACAACTTGATTTTCTCACAAAGTTCAATGTCTCTTACAACAATCTCACAGGCCCTGTACCAAAGGGAATCCACTTCACTACATTTGACAGCACTTCATATCAAGGAAACCAAGGATTGTGTGGAGACGTACTGCCAAAGAAATGTGAAAATTCTGAGGGCACTCAACTTCCACCTTCAACATCAGAAGATAATGACTCGGACACTGGAATTGAATTGGATTGCAAATTTGTTGTGGCGGGGTTAGCGAGTGGCTTGTTGGTGGGAGTGGTTCTTGCAGACTTTGTGATTACCAAGTGGAATGTGCGGTTCATTGAAATTGTTGCGGTATTGGTTAGACTATCAAAAAGGATGAGAAGGCCCAGAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8

Protein Analysis

896

Amino Acids

99.86

Weight (kDa)

6.79

Isoelectric Point (pI)

42.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 316 - 376 1.7e-07 Leucine rich repeat
LRR_8 PF13855 539 - 597 1.6e-08 Leucine rich repeat
LRR_8 PF13855 710 - 765 3.7e-07 Leucine rich repeat
LRR_8 PF13855 730 - 789 1.3e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1056
AciI CCGC 7 cut(s) 349, 687, 1056, 1586, 2558, 2626, 2645
AclWI GGATC 2 cut(s) 1269, 2283
AcoI YGGCCR 1 cut(s) 645
AcuI CTGAAG 2 cut(s) 507, 1440
AfaI GTAC 4 cut(s) 36, 1060, 2379, 2451
AfiI CCNNNNNNNGG 3 cut(s) 109, 221, 1592
AhlI ACTAGT 2 cut(s) 31, 37
AluBI AGCT 6 cut(s) 117, 572, 1087, 1096, 1460, 2293
AluI AGCT 6 cut(s) 117, 572, 1087, 1096, 1460, 2293
Alw21I GWGCWC 2 cut(s) 119, 1098
Alw26I GTCTC 4 cut(s) 507, 2225, 2356, 2439
AlwI GGATC 2 cut(s) 1269, 2283
AlwNI CAGNNNCTG 2 cut(s) 2317, 2375
AoxI GGCC 8 cut(s) 249, 645, 688, 841, 961, 1285, 2371, 2678
ApeKI GCWGC 6 cut(s) 88, 91, 240, 782, 1460, 1912
ArsI GACNNNNNNTTYG 2 cut(s) 821, 853
AspS9I GGNCC 7 cut(s) 249, 745, 842, 1285, 1849, 2372, 2679
AsuC2I CCSGG 1 cut(s) 253
AsuHPI GGTGA 4 cut(s) 1090, 1961, 2215, 2312
AsuII TTCGAA 3 cut(s) 191, 679, 899
AvaII GGWCC 2 cut(s) 745, 1849
BaeGI GKGCMC 1 cut(s) 2483
BaeI ACNNNNGTAYC 2 cut(s) 425, 458
BalI TGGCCA 1 cut(s) 647
BanII GRGCYC 2 cut(s) 119, 1098
BbsI GAAGAC 1 cut(s) 278
Bbv12I GWGCWC 2 cut(s) 119, 1098
BbvCI CCTCAGC 1 cut(s) 2310
BbvI GCAGC 6 cut(s) 100, 103, 227, 794, 1447, 1899
BccI CCATC 5 cut(s) 103, 854, 926, 1475, 1690
BcnI CCSGG 1 cut(s) 253
BcoDI GTCTC 4 cut(s) 507, 2225, 2356, 2439
BcuI ACTAGT 2 cut(s) 31, 37
BfmI CTRYAG 2 cut(s) 780, 1167
BglI GCCNNNNNGGC 1 cut(s) 696
BglII AGATCT 2 cut(s) 1108, 1235
BisI GCNGC 7 cut(s) 89, 92, 241, 688, 783, 1461, 1913
BlsI GCNGC 7 cut(s) 90, 93, 242, 689, 784, 1462, 1914
BmcAI AGTACT 1 cut(s) 36
Bme1390I CCNGG 1 cut(s) 253
Bme18I GGWCC 2 cut(s) 745, 1849
BmgT120I GGNCC 7 cut(s) 249, 745, 842, 1285, 1849, 2372, 2679
BmiI GGNNCC 1 cut(s) 844
BmrFI CCNGG 1 cut(s) 253
BmsI GCATC 2 cut(s) 1472, 2241
BpiI GAAGAC 1 cut(s) 278
BplI GAGNNNNNCTC 4 cut(s) 101, 133, 1085, 1117
BpmI CTGGAG 2 cut(s) 1007, 1362
Bpu10I CCTNAGC 1 cut(s) 2310
Bpu14I TTCGAA 3 cut(s) 191, 679, 899
BpuEI CTTGAG 4 cut(s) 113, 383, 580, 2122
BpuMI CCSGG 1 cut(s) 253
BsaWI WCCGGW 1 cut(s) 1502
BsaXI ACNNNNNCTCC 2 cut(s) 1860, 1890
Bsc4I CCNNNNNNNGG 3 cut(s) 109, 221, 1592
Bse1I ACTGG 5 cut(s) 772, 1024, 1379, 2322, 2530
Bse3DI GCAATG 2 cut(s) 184, 1482
BseLI CCNNNNNNNGG 3 cut(s) 109, 221, 1592
BseMI GCAATG 2 cut(s) 184, 1482
BseMII CTCAG 9 cut(s) 313, 451, 518, 1010, 1027, 1818, 1959, 2324, 2466
BseNI ACTGG 5 cut(s) 772, 1024, 1379, 2322, 2530
BseRI GAGGAG 1 cut(s) 125
BseSI GKGCMC 1 cut(s) 2483
BseXI GCAGC 6 cut(s) 100, 103, 227, 794, 1447, 1899
BshFI GGCC 8 cut(s) 251, 647, 690, 843, 963, 1287, 2373, 2680
BsiHKAI GWGCWC 2 cut(s) 119, 1098
BsiSI CCGG 2 cut(s) 252, 1503
BslFI GGGAC 4 cut(s) 617, 1808, 1999, 2191
BslI CCNNNNNNNGG 3 cut(s) 109, 221, 1592
BsmAI GTCTC 4 cut(s) 507, 2225, 2356, 2439
BsmBI CGTCTC 1 cut(s) 2439
BsmFI GGGAC 4 cut(s) 617, 1808, 1999, 2191
BsnI GGCC 8 cut(s) 251, 647, 690, 843, 963, 1287, 2373, 2680
Bsp119I TTCGAA 3 cut(s) 191, 679, 899
Bsp1286I GDGCHC 3 cut(s) 119, 1098, 2483
Bsp143I GATC 7 cut(s) 295, 601, 1108, 1235, 1261, 2042, 2275
Bsp19I CCATGG 2 cut(s) 1391, 1720
BspACI CCGC 7 cut(s) 349, 687, 1056, 1586, 2558, 2626, 2645
BspANI GGCC 8 cut(s) 251, 647, 690, 843, 963, 1287, 2373, 2680
BspCNI CTCAG 9 cut(s) 312, 450, 517, 1009, 1026, 1819, 1958, 2323, 2467
BspLI GGNNCC 1 cut(s) 844
BspMAI CTGCAG 2 cut(s) 784, 1171
BspPI GGATC 2 cut(s) 1269, 2283
BspT104I TTCGAA 3 cut(s) 191, 679, 899
BsrBI CCGCTC 1 cut(s) 1056
BsrDI GCAATG 2 cut(s) 184, 1482
BsrI ACTGG 5 cut(s) 772, 1024, 1379, 2322, 2530
BssMI GATC 7 cut(s) 295, 601, 1108, 1235, 1261, 2042, 2275
BssT1I CCWWGG 9 cut(s) 642, 748, 786, 858, 930, 1391, 1720, 2244, 2431
Bst4CI ACNGT 4 cut(s) 498, 631, 1063, 2219
Bst6I CTCTTC 1 cut(s) 350
BstAPI GCANNNNNTGC 1 cut(s) 1166
BstBI TTCGAA 3 cut(s) 191, 679, 899
BstDSI CCRYGG 2 cut(s) 1391, 1720
BstENI CCTNNNNNAGG 1 cut(s) 219
BstKTI GATC 7 cut(s) 298, 604, 1111, 1238, 1264, 2045, 2278
BstMAI GTCTC 4 cut(s) 507, 2225, 2356, 2439
BstMBI GATC 7 cut(s) 295, 601, 1108, 1235, 1261, 2042, 2275
BstMWI GCNNNNNNNGC 5 cut(s) 696, 1093, 1166, 1751, 2564
BstNSI RCATGY 1 cut(s) 240
BstSCI CCNGG 1 cut(s) 251
BstSFI CTRYAG 2 cut(s) 780, 1167
BstSLI GKGCMC 1 cut(s) 2483
BstV1I GCAGC 6 cut(s) 100, 103, 227, 794, 1447, 1899
BstV2I GAAGAC 1 cut(s) 278
BstX2I RGATCY 4 cut(s) 1108, 1235, 1261, 2275
BstYI RGATCY 4 cut(s) 1108, 1235, 1261, 2275
BsuRI GGCC 8 cut(s) 251, 647, 690, 843, 963, 1287, 2373, 2680
BtgI CCRYGG 2 cut(s) 1391, 1720
BtsI GCAGTG 1 cut(s) 1595
BtsIMutI CAGTG 5 cut(s) 157, 1595, 1995, 2019, 2523
CaiI CAGNNNCTG 2 cut(s) 2317, 2375
Cfr13I GGNCC 7 cut(s) 249, 745, 842, 1285, 1849, 2372, 2679
Csp6I GTAC 4 cut(s) 35, 1059, 2378, 2450
CviQI GTAC 4 cut(s) 35, 1059, 2378, 2450
DpnI GATC 7 cut(s) 297, 603, 1110, 1237, 1263, 2044, 2277
DpnII GATC 7 cut(s) 295, 601, 1108, 1235, 1261, 2042, 2275
DraI TTTAAA 1 cut(s) 981
EaeI YGGCCR 1 cut(s) 645
Eam1104I CTCTTC 1 cut(s) 350
EarI CTCTTC 1 cut(s) 350
EciI GGCGGA 1 cut(s) 338
Ecl136II GAGCTC 2 cut(s) 117, 1096
Eco130I CCWWGG 9 cut(s) 642, 748, 786, 858, 930, 1391, 1720, 2244, 2431
Eco24I GRGCYC 2 cut(s) 119, 1098
Eco47I GGWCC 2 cut(s) 745, 1849
Eco53kI GAGCTC 2 cut(s) 117, 1096
Eco57I CTGAAG 2 cut(s) 507, 1440
EcoICRI GAGCTC 2 cut(s) 117, 1096
EcoNI CCTNNNNNAGG 1 cut(s) 219
EcoO109I RGGNCCY 1 cut(s) 2372
EcoRI GAATTC 1 cut(s) 2168
EcoT14I CCWWGG 9 cut(s) 642, 748, 786, 858, 930, 1391, 1720, 2244, 2431
EcoT38I GRGCYC 2 cut(s) 119, 1098
ErhI CCWWGG 9 cut(s) 642, 748, 786, 858, 930, 1391, 1720, 2244, 2431
Esp3I CGTCTC 1 cut(s) 2439
FaqI GGGAC 4 cut(s) 617, 1808, 1999, 2191
FauI CCCGC 1 cut(s) 2551
Fnu4HI GCNGC 7 cut(s) 89, 92, 241, 688, 783, 1461, 1913
FriOI GRGCYC 2 cut(s) 119, 1098
Fsp4HI GCNGC 7 cut(s) 89, 92, 241, 688, 783, 1461, 1913
GluI GCNGC 7 cut(s) 89, 92, 241, 688, 783, 1461, 1913
GsuI CTGGAG 2 cut(s) 1007, 1362
HaeIII GGCC 8 cut(s) 251, 647, 690, 843, 963, 1287, 2373, 2680
HapII CCGG 2 cut(s) 252, 1503
HincII GTYRAC 1 cut(s) 510
HindII GTYRAC 1 cut(s) 510
HpaII CCGG 2 cut(s) 252, 1503
HphI GGTGA 4 cut(s) 1090, 1961, 2215, 2312
Hpy166II GTNNAC 1 cut(s) 510
Hpy188I TCNGA 6 cut(s) 487, 547, 1472, 2476, 2506, 2521
Hpy8I GTNNAC 1 cut(s) 510
HpyAV CCTTC 7 cut(s) 187, 686, 974, 1464, 2147, 2505, 2670
HpyCH4III ACNGT 4 cut(s) 498, 631, 1063, 2219
HpyCH4IV ACGT 2 cut(s) 1428, 2448
HpyF10VI GCNNNNNNNGC 5 cut(s) 696, 1093, 1166, 1751, 2564
HpySE526I ACGT 2 cut(s) 1428, 2448
Kzo9I GATC 7 cut(s) 295, 601, 1108, 1235, 1261, 2042, 2275
Lsp1109I GCAGC 6 cut(s) 100, 103, 227, 794, 1447, 1899
LweI GCATC 2 cut(s) 1472, 2241
MaeII ACGT 2 cut(s) 1428, 2448
MaeIII GTNAC 3 cut(s) 152, 654, 1737
MalI GATC 7 cut(s) 297, 603, 1110, 1237, 1263, 2044, 2277
MbiI CCGCTC 1 cut(s) 1056
MboI GATC 7 cut(s) 295, 601, 1108, 1235, 1261, 2042, 2275
MboII GAAGA 6 cut(s) 283, 337, 1379, 1903, 2170, 2519
MfeI CAATTG 1 cut(s) 833
MflI RGATCY 4 cut(s) 1108, 1235, 1261, 2275
MhlI GDGCHC 3 cut(s) 119, 1098, 2483
MlsI TGGCCA 1 cut(s) 647
MluNI TGGCCA 1 cut(s) 647
MlyI GAGTC 2 cut(s) 429, 2510
MmeI TCCRAC 3 cut(s) 357, 1239, 2253
Mox20I TGGCCA 1 cut(s) 647
MscI TGGCCA 1 cut(s) 647
MseI TTAA 6 cut(s) 581, 980, 1083, 1499, 1688, 1791
MslI CAYNNNNRTG 2 cut(s) 13, 2072
Msp20I TGGCCA 1 cut(s) 647
MspA1I CMGCKG 1 cut(s) 1460
MspI CCGG 2 cut(s) 252, 1503
MspR9I CCNGG 1 cut(s) 253
MunI CAATTG 1 cut(s) 833
MwoI GCNNNNNNNGC 5 cut(s) 696, 1093, 1166, 1751, 2564
NciI CCSGG 1 cut(s) 253
NcoI CCATGG 2 cut(s) 1391, 1720
NdeII GATC 7 cut(s) 295, 601, 1108, 1235, 1261, 2042, 2275
NlaIV GGNNCC 1 cut(s) 844
NmuCI GTSAC 3 cut(s) 152, 654, 1737
NspI RCATGY 1 cut(s) 240
NspV TTCGAA 3 cut(s) 191, 679, 899
PfeI GAWTC 9 cut(s) 555, 901, 1018, 1139, 1894, 2161, 2267, 2305, 2388
PkrI GCNGC 7 cut(s) 90, 93, 242, 689, 784, 1462, 1914
PleI GAGTC 2 cut(s) 429, 2510
PpsI GAGTC 2 cut(s) 429, 2510
Psp124BI GAGCTC 2 cut(s) 119, 1098
PspN4I GGNNCC 1 cut(s) 844
PspPI GGNCC 7 cut(s) 249, 745, 842, 1285, 1849, 2372, 2679
PstI CTGCAG 2 cut(s) 784, 1171
PstNI CAGNNNCTG 2 cut(s) 2317, 2375
PsuI RGATCY 4 cut(s) 1108, 1235, 1261, 2275
PvuII CAGCTG 1 cut(s) 1460
RsaI GTAC 4 cut(s) 36, 1060, 2379, 2451
RsaNI GTAC 4 cut(s) 35, 1059, 2378, 2450
RseI CAYNNNNRTG 2 cut(s) 13, 2072
SacI GAGCTC 2 cut(s) 119, 1098
SaqAI TTAA 6 cut(s) 581, 980, 1083, 1499, 1688, 1791
SatI GCNGC 7 cut(s) 89, 92, 241, 688, 783, 1461, 1913
Sau3AI GATC 7 cut(s) 295, 601, 1108, 1235, 1261, 2042, 2275
Sau96I GGNCC 7 cut(s) 249, 745, 842, 1285, 1849, 2372, 2679
ScaI AGTACT 1 cut(s) 36
SchI GAGTC 2 cut(s) 429, 2510
ScrFI CCNGG 1 cut(s) 253
SduI GDGCHC 3 cut(s) 119, 1098, 2483
SfaNI GCATC 2 cut(s) 1472, 2241
SfcI CTRYAG 2 cut(s) 780, 1167
SfuI TTCGAA 3 cut(s) 191, 679, 899
SinI GGWCC 2 cut(s) 745, 1849
SmiI ATTTAAAT 1 cut(s) 981
SmiMI CAYNNNNRTG 2 cut(s) 13, 2072
SmlI CTYRAG 4 cut(s) 128, 362, 559, 2137
SmoI CTYRAG 4 cut(s) 128, 362, 559, 2137
SpeI ACTAGT 2 cut(s) 31, 37
SsiI CCGC 7 cut(s) 349, 687, 1056, 1586, 2558, 2626, 2645
SspI AATATT 1 cut(s) 724
SstI GAGCTC 2 cut(s) 119, 1098
StyD4I CCNGG 1 cut(s) 251
StyI CCWWGG 9 cut(s) 642, 748, 786, 858, 930, 1391, 1720, 2244, 2431
SwaI ATTTAAAT 1 cut(s) 981
TaaI ACNGT 4 cut(s) 498, 631, 1063, 2219
TaiI ACGT 2 cut(s) 1431, 2451
TaqI TCGA 4 cut(s) 191, 679, 899, 2041
TatI WGTACW 1 cut(s) 34
TauI GCSGC 1 cut(s) 690
TfiI GAWTC 9 cut(s) 555, 901, 1018, 1139, 1894, 2161, 2267, 2305, 2388
Tru1I TTAA 6 cut(s) 581, 980, 1083, 1499, 1688, 1791
Tru9I TTAA 6 cut(s) 581, 980, 1083, 1499, 1688, 1791
TscAI CASTG 5 cut(s) 157, 1595, 2002, 2026, 2530
TseFI GTSAC 3 cut(s) 152, 654, 1737
TseI GCWGC 6 cut(s) 88, 91, 240, 782, 1460, 1912
Tsp45I GTSAC 3 cut(s) 152, 654, 1737
TspRI CASTG 5 cut(s) 157, 1595, 2002, 2026, 2530
VpaK11BI GGWCC 2 cut(s) 745, 1849
XagI CCTNNNNNAGG 1 cut(s) 219
XbaI TCTAGA 3 cut(s) 1036, 1105, 1976
XceI RCATGY 1 cut(s) 240
XcmI CCANNNNNNNNNTGG 2 cut(s) 1302, 2438
ZrmI AGTACT 1 cut(s) 36
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.