RchiOBHm_Chr1g0340341

Receptor-like protein 12

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
31932284 .. 31937223
4940 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56714

Sequence Viewer

Length: 1962 bp
ATGTTTCGTGCATTATTATTGTTACCTTTAACATCCATCACGTACTATAACATTGCAAACAACCAATTAACGGGACAAGTTTCACCAATGATTTGCAATATGACTTCTCTTAGATACCTTGATTTGTCAAACAACAAGTTGACTGGCAGCCTACCTCAGTGTGGGAGAAATTTCAGTGTTAATCTGGAATATCTCAAACTTGGAAACAACTCATTTCTTGGAAATCTTCCTCAATCGTACTCCAATGGAAGCAGTTTAAGGATGATGGATATTAGTCACAACAATTTCCATGGGCAACTACTGAGGTCACTAGCGAATTGTGCAAGTCTTGAAAGTTTAGTCCTTTCACACAATAAATTTAACGATACCAAACCACAATGTACCGTTTGGTTGGGGGCTCTCCCTGAGTTGAAAATTTTGACAATGGACCACAATGTGTTCTATGGATGTAATAACCTGTTTTTACAAATATTAGTGGAATTACTGTTGTTGCTCTGCATATCACTCTCTCTCACTCCCTCTTTTCGTCCGCAAAACAGAGCATTTGCTCTCAACACTCTCTCTCGCTCCACCGGCCACCAGACAGTACCAAACCACCTCCCACACCTTCAAGTCGATCGTACGCAGCTTCAGGAGGCGGCCTTGCGCTGCAGAACCACCGGAGACGACGGCGGAGGCCGAAAAACCCGTTTTTGTTCCAAGCTTGATAACTCGAGCTACCGGCCACGAAACCTTCCCAAACTTCACCCACAGGTTCGCCTTGACCTTCTGAAGCTTCCAGAACCTCCCTTGCACTGCGCCGATGCCTCTGGAAGCGGCTGGAACTCGAACCCGGTTGCACCGAAAACTTCGATCAGTTCTTGTAGAGATCGGATCGGAGTTTCGCGCCCGTACAGAAGACCGACGTTTTTTGATCCAGCCGGGCTTGGAGTTGTAGATGCGGTCGTCGTGGCGCTTGACGACGACGTTTTGATGGTGGTGGGCGGAGGAATAGTCGGTGTCGTTGCACTGGGACTGGGCTTGACCGCCGGTGCTGCAAATGCTTCCAAAAAAATTAAGGACGTTTATTGTATTTATTATTATTCATGTTTCGGTTTTGAATTTATTATTCAAAATTCGGGGCGTGACAATGGAGTGATTGTGAAACCTAATAAGAAGAATCTTCATTTCCCAATGCTGCGTATTCTTGATTTGTCTTACAATAAGTTCTCAGGTCAGTTTCCATTTGAATACATTTTTTCTGGAAATGGAACAACAAGTATCACTCATGATCTGGAGTATTACTACATTGATTCATTTTCTGGTGAGTATTACTCAATCACGATAATTTGTAAAGGTGTGGAGAGGTACTACCCAAGAGTTCGAGAGGACTTGATACTCATTGACATCTCAAGCAACAATTTTGAAGGGCAGATTCCTGAATTCATTGGGAAACTTGAGGGCATTTGGTCACTCAATCTCTCCAATAACATTCTCACGGGTCACATCCCATCATCCTTGAGCAGCTTATCAAGGCTTGAGTCGTTGGATCTTTCACACAACAAGCTCTCTGGTGAGATTCCTCAGCAACTGGCACAACTTGATTCTCTCTCAAAGTTCAATGTCTCTCACAACAATCTCACAGGCCCTGTACCACGGGGAACCCACTTCACTACATTTGACAGCACTTCATATCTGGGAAACCAAGGATTGTGCGGAGATCTATTGCCCAAGAAATGTGGAAATTCTGTGGGCACTCAACTTCCACCTTCAACATCAGAAGATAATGACTTGGGCTCTGGAATTGAATTGGATTGGAAATTTATTGTGGCAGGGTCAGGGAGTGGCTTGTTGGTGGGAGTGGTTCTTGCAGACTTTGTGATTACCAAGTGGAATGTGTGGTTTATTAAGATTGTTGCAGTACTGATCATGTTTTCGAAAAGGATAAGGAAGCCTCGATCAGTACTGATCATGTTGCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

653

Amino Acids

72.19

Weight (kDa)

8.75

Isoelectric Point (pI)

35.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 61 - 120 1.6e-06 Leucine rich repeat
LRR_8 PF13855 484 - 540 9.8e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 886
AciI CCGC 8 cut(s) 530, 638, 672, 816, 941, 984, 1026, 1695
AclWI GGATC 3 cut(s) 881, 908, 1536
AcoI YGGCCR 2 cut(s) 574, 722
AcsI RAATTY 8 cut(s) 169, 356, 414, 1100, 1114, 1421, 1723, 1799
AcuI CTGAAG 2 cut(s) 614, 791
AdeI CACNNNGTG 1 cut(s) 436
AfiI CCNNNNNNNGG 2 cut(s) 70, 161
AluBI AGCT 6 cut(s) 628, 703, 717, 775, 1506, 1546
AluI AGCT 6 cut(s) 628, 703, 717, 775, 1506, 1546
Alw26I GTCTC 2 cut(s) 657, 1609
AlwI GGATC 3 cut(s) 881, 908, 1536
AlwNI CAGNNNCTG 2 cut(s) 1570, 1628
Ama87I CYCGRG 1 cut(s) 712
AoxI GGCC 5 cut(s) 574, 639, 676, 722, 1624
ApeKI GCWGC 6 cut(s) 147, 625, 648, 1034, 1177, 1503
ApoI RAATTY 8 cut(s) 169, 356, 414, 1100, 1114, 1421, 1723, 1799
AspLEI GCGC 4 cut(s) 648, 800, 888, 955
AspS9I GGNCC 2 cut(s) 427, 1625
AsuC2I CCSGG 2 cut(s) 833, 922
AsuHPI GGTGA 4 cut(s) 75, 737, 1316, 1565
AsuII TTCGAA 1 cut(s) 1916
AvaI CYCGRG 1 cut(s) 712
AvaII GGWCC 1 cut(s) 427
BaeGI GKGCMC 1 cut(s) 1736
BanII GRGCYC 2 cut(s) 400, 1778
BbsI GAAGAC 1 cut(s) 904
BbvCI CCTCAGC 1 cut(s) 1563
BbvI GCAGC 6 cut(s) 159, 635, 637, 1021, 1164, 1515
BccI CCATC 4 cut(s) 44, 259, 967, 1498
BceAI ACGGC 1 cut(s) 685
BclI TGATCA 2 cut(s) 1905, 1947
BcnI CCSGG 2 cut(s) 833, 922
BcoDI GTCTC 2 cut(s) 657, 1609
BfaI CTAG 1 cut(s) 311
BfmI CTRYAG 1 cut(s) 649
BfoI RGCGCY 1 cut(s) 956
BglII AGATCT 1 cut(s) 1699
BisI GCNGC 8 cut(s) 148, 626, 639, 649, 817, 1035, 1178, 1504
BlsI GCNGC 8 cut(s) 149, 627, 640, 650, 818, 1036, 1179, 1505
BmcAI AGTACT 2 cut(s) 1902, 1944
Bme1390I CCNGG 2 cut(s) 833, 922
Bme18I GGWCC 1 cut(s) 427
BmeT110I CYCGRG 1 cut(s) 712
BmgT120I GGNCC 2 cut(s) 427, 1625
BmiI GGNNCC 1 cut(s) 1642
BmrFI CCNGG 2 cut(s) 833, 922
BmrI ACTGGG 2 cut(s) 1019, 1025
BmsI GCATC 2 cut(s) 793, 928
BmuI ACTGGG 2 cut(s) 1019, 1025
BpiI GAAGAC 1 cut(s) 904
BplI GAGNNNNNCTC 2 cut(s) 1298, 1330
BpmI CTGGAG 1 cut(s) 1295
Bpu10I CCTNAGC 1 cut(s) 1563
Bpu14I TTCGAA 1 cut(s) 1916
BpuEI CTTGAG 4 cut(s) 1375, 1457, 1519, 1538
BpuMI CCSGG 2 cut(s) 833, 922
BsaAI YACGTR 1 cut(s) 42
BsaJI CCNNGG 3 cut(s) 289, 1634, 1684
BsaWI WCCGGW 1 cut(s) 659
BsaXI ACNNNNNCTCC 4 cut(s) 978, 1008, 1125, 1155
Bsc4I CCNNNNNNNGG 2 cut(s) 70, 161
Bse118I RCCGGY 3 cut(s) 572, 720, 1028
Bse1I ACTGG 4 cut(s) 148, 1014, 1020, 1575
Bse3DI GCAATG 1 cut(s) 51
BseDI CCNNGG 3 cut(s) 289, 1634, 1684
BseGI GGATG 5 cut(s) 32, 267, 452, 1485, 1493
BseLI CCNNNNNNNGG 2 cut(s) 70, 161
BseMI GCAATG 1 cut(s) 51
BseMII CTCAG 5 cut(s) 170, 293, 396, 1224, 1577
BseNI ACTGG 4 cut(s) 148, 1014, 1020, 1575
BseSI GKGCMC 1 cut(s) 1736
BseXI GCAGC 6 cut(s) 159, 635, 637, 1021, 1164, 1515
Bsh1236I CGCG 1 cut(s) 886
Bsh1285I CGRYCG 2 cut(s) 619, 945
BshFI GGCC 5 cut(s) 576, 641, 678, 724, 1626
BsiEI CGRYCG 2 cut(s) 619, 945
BsiHKCI CYCGRG 1 cut(s) 712
BsiSI CCGG 6 cut(s) 573, 660, 721, 833, 921, 1029
BsiWI CGTACG 1 cut(s) 620
BslFI GGGAC 2 cut(s) 87, 1026
BslI CCNNNNNNNGG 2 cut(s) 70, 161
BsmAI GTCTC 2 cut(s) 657, 1609
BsmBI CGTCTC 1 cut(s) 657
BsmFI GGGAC 2 cut(s) 87, 1026
BsnI GGCC 5 cut(s) 576, 641, 678, 724, 1626
BsoBI CYCGRG 1 cut(s) 712
Bsp119I TTCGAA 1 cut(s) 1916
Bsp1286I GDGCHC 3 cut(s) 400, 1736, 1778
Bsp19I CCATGG 1 cut(s) 289
BspACI CCGC 8 cut(s) 530, 638, 672, 816, 941, 984, 1026, 1695
BspANI GGCC 5 cut(s) 576, 641, 678, 724, 1626
BspCNI CTCAG 5 cut(s) 169, 294, 397, 1223, 1576
BspFNI CGCG 1 cut(s) 886
BspHI TCATGA 1 cut(s) 1267
BspLI GGNNCC 1 cut(s) 1642
BspMAI CTGCAG 1 cut(s) 653
BspPI GGATC 3 cut(s) 881, 908, 1536
BspT104I TTCGAA 1 cut(s) 1916
BsrDI GCAATG 1 cut(s) 51
BsrFI RCCGGY 3 cut(s) 572, 720, 1028
BsrI ACTGG 4 cut(s) 148, 1014, 1020, 1575
BssAI RCCGGY 3 cut(s) 572, 720, 1028
BssECI CCNNGG 3 cut(s) 289, 1634, 1684
BssT1I CCWWGG 2 cut(s) 289, 1684
Bst4CI ACNGT 3 cut(s) 385, 486, 586
BstBAI YACGTR 1 cut(s) 42
BstBI TTCGAA 1 cut(s) 1916
BstDEI CTNAG 6 cut(s) 110, 156, 302, 405, 1210, 1563
BstDSI CCRYGG 2 cut(s) 289, 1634
BstF5I GGATG 5 cut(s) 32, 267, 452, 1485, 1493
BstFNI CGCG 1 cut(s) 886
BstH2I RGCGCY 1 cut(s) 956
BstHHI GCGC 4 cut(s) 648, 800, 888, 955
BstMAI GTCTC 2 cut(s) 657, 1609
BstMCI CGRYCG 2 cut(s) 619, 945
BstMWI GCNNNNNNNGC 4 cut(s) 320, 573, 1034, 1040
BstSCI CCNGG 2 cut(s) 831, 920
BstSFI CTRYAG 1 cut(s) 649
BstSLI GKGCMC 1 cut(s) 1736
BstUI CGCG 1 cut(s) 886
BstV1I GCAGC 6 cut(s) 159, 635, 637, 1021, 1164, 1515
BstV2I GAAGAC 1 cut(s) 904
BstX2I RGATCY 2 cut(s) 1528, 1699
BstYI RGATCY 2 cut(s) 1528, 1699
BsuRI GGCC 5 cut(s) 576, 641, 678, 724, 1626
BtgI CCRYGG 2 cut(s) 289, 1634
BtsCI GGATG 5 cut(s) 32, 267, 452, 1485, 1493
BtsI GCAGTG 1 cut(s) 793
BtsIMutI CAGTG 4 cut(s) 164, 181, 793, 1007
CaiI CAGNNNCTG 2 cut(s) 1570, 1628
CciI TCATGA 1 cut(s) 1267
CfoI GCGC 4 cut(s) 648, 800, 888, 955
Cfr10I RCCGGY 3 cut(s) 572, 720, 1028
Cfr13I GGNCC 2 cut(s) 427, 1625
CspCI CAANNNNNGTGG 2 cut(s) 1699, 1734
CviAII CATG 6 cut(s) 290, 1086, 1268, 1909, 1951, 1959
DdeI CTNAG 6 cut(s) 110, 156, 302, 405, 1210, 1563
DraIII CACNNNGTG 1 cut(s) 436
EaeI YGGCCR 2 cut(s) 574, 722
EciI GGCGGA 2 cut(s) 687, 999
Eco130I CCWWGG 2 cut(s) 289, 1684
Eco24I GRGCYC 2 cut(s) 400, 1778
Eco47I GGWCC 1 cut(s) 427
Eco57I CTGAAG 2 cut(s) 614, 791
Eco88I CYCGRG 1 cut(s) 712
EcoO109I RGGNCCY 1 cut(s) 1625
EcoRI GAATTC 1 cut(s) 1421
EcoT14I CCWWGG 2 cut(s) 289, 1684
EcoT38I GRGCYC 2 cut(s) 400, 1778
ErhI CCWWGG 2 cut(s) 289, 1684
Esp3I CGTCTC 1 cut(s) 657
FaeI CATG 6 cut(s) 293, 1089, 1271, 1912, 1954, 1962
FaqI GGGAC 2 cut(s) 87, 1026
FatI CATG 6 cut(s) 289, 1085, 1267, 1908, 1950, 1958
FbaI TGATCA 2 cut(s) 1905, 1947
Fnu4HI GCNGC 8 cut(s) 148, 626, 639, 649, 817, 1035, 1178, 1504
FokI GGATG 5 cut(s) 19, 274, 459, 1472, 1480
FriOI GRGCYC 2 cut(s) 400, 1778
Fsp4HI GCNGC 8 cut(s) 148, 626, 639, 649, 817, 1035, 1178, 1504
FspBI CTAG 1 cut(s) 311
GlaI GCGC 4 cut(s) 647, 799, 887, 954
GluI GCNGC 8 cut(s) 148, 626, 639, 649, 817, 1035, 1178, 1504
GsuI CTGGAG 1 cut(s) 1295
HaeII RGCGCY 1 cut(s) 956
HaeIII GGCC 5 cut(s) 576, 641, 678, 724, 1626
HapII CCGG 6 cut(s) 573, 660, 721, 833, 921, 1029
HhaI GCGC 4 cut(s) 648, 800, 888, 955
Hin1II CATG 6 cut(s) 293, 1089, 1271, 1912, 1954, 1962
Hin6I GCGC 4 cut(s) 646, 798, 886, 953
HinP1I GCGC 4 cut(s) 646, 798, 886, 953
HincII GTYRAC 1 cut(s) 141
HindII GTYRAC 1 cut(s) 141
HindIII AAGCTT 2 cut(s) 701, 773
HinfI GANTC 6 cut(s) 1159, 1292, 1414, 1520, 1558, 1583
HpaII CCGG 6 cut(s) 573, 660, 721, 833, 921, 1029
HphI GGTGA 4 cut(s) 75, 737, 1316, 1565
Hpy166II GTNNAC 1 cut(s) 141
Hpy188I TCNGA 4 cut(s) 771, 873, 878, 1759
Hpy8I GTNNAC 1 cut(s) 141
Hpy99I CGWCG 5 cut(s) 671, 907, 950, 965, 968
HpyAV CCTTC 5 cut(s) 617, 743, 776, 1400, 1758
HpyCH4III ACNGT 3 cut(s) 385, 486, 586
HpyCH4IV ACGT 4 cut(s) 41, 905, 966, 1062
HpyF10VI GCNNNNNNNGC 4 cut(s) 320, 573, 1034, 1040
HpyF3I CTNAG 6 cut(s) 110, 156, 302, 405, 1210, 1563
HpySE526I ACGT 4 cut(s) 41, 905, 966, 1062
Hsp92II CATG 6 cut(s) 293, 1089, 1271, 1912, 1954, 1962
HspAI GCGC 4 cut(s) 646, 798, 886, 953
Ksp22I TGATCA 2 cut(s) 1905, 1947
LmnI GCTCC 1 cut(s) 572
Lsp1109I GCAGC 6 cut(s) 159, 635, 637, 1021, 1164, 1515
LweI GCATC 2 cut(s) 793, 928
MaeI CTAG 1 cut(s) 311
MaeII ACGT 4 cut(s) 41, 905, 966, 1062
MaeIII GTNAC 6 cut(s) 21, 275, 306, 1124, 1449, 1481
MboII GAAGA 5 cut(s) 218, 909, 1154, 1168, 1772
MflI RGATCY 2 cut(s) 1528, 1699
MhlI GDGCHC 3 cut(s) 400, 1736, 1778
MlyI GAGTC 1 cut(s) 1529
MmeI TCCRAC 1 cut(s) 1506
MseI TTAA 7 cut(s) 29, 68, 180, 257, 360, 1056, 1887
MspI CCGG 6 cut(s) 573, 660, 721, 833, 921, 1029
MspR9I CCNGG 2 cut(s) 833, 922
MvnI CGCG 1 cut(s) 886
MwoI GCNNNNNNNGC 4 cut(s) 320, 573, 1034, 1040
NciI CCSGG 2 cut(s) 833, 922
NcoI CCATGG 1 cut(s) 289
NlaIII CATG 6 cut(s) 293, 1089, 1271, 1912, 1954, 1962
NlaIV GGNNCC 1 cut(s) 1642
NmuCI GTSAC 5 cut(s) 275, 306, 1124, 1449, 1481
NspV TTCGAA 1 cut(s) 1916
PaeR7I CTCGAG 1 cut(s) 712
PagI TCATGA 1 cut(s) 1267
PfeI GAWTC 5 cut(s) 1159, 1292, 1414, 1558, 1583
Pfl23II CGTACG 1 cut(s) 620
PkrI GCNGC 8 cut(s) 149, 627, 640, 650, 818, 1036, 1179, 1505
Ple19I CGATCG 1 cut(s) 619
PleI GAGTC 1 cut(s) 1528
PpsI GAGTC 1 cut(s) 1528
Ppu21I YACGTR 1 cut(s) 42
PspLI CGTACG 1 cut(s) 620
PspN4I GGNNCC 1 cut(s) 1642
PspPI GGNCC 2 cut(s) 427, 1625
PspXI VCTCGAGB 1 cut(s) 712
PstI CTGCAG 1 cut(s) 653
PstNI CAGNNNCTG 2 cut(s) 1570, 1628
PsuI RGATCY 2 cut(s) 1528, 1699
PvuI CGATCG 1 cut(s) 619
SaqAI TTAA 7 cut(s) 29, 68, 180, 257, 360, 1056, 1887
SatI GCNGC 8 cut(s) 148, 626, 639, 649, 817, 1035, 1178, 1504
Sau96I GGNCC 2 cut(s) 427, 1625
ScaI AGTACT 2 cut(s) 1902, 1944
SchI GAGTC 1 cut(s) 1529
ScrFI CCNGG 2 cut(s) 833, 922
SduI GDGCHC 3 cut(s) 400, 1736, 1778
SfaNI GCATC 2 cut(s) 793, 928
SfcI CTRYAG 1 cut(s) 649
Sfr274I CTCGAG 1 cut(s) 712
SfuI TTCGAA 1 cut(s) 1916
SgrAI CRCCGGYG 1 cut(s) 1028
SinI GGWCC 1 cut(s) 427
SlaI CTCGAG 1 cut(s) 712
SmlI CTYRAG 5 cut(s) 712, 1390, 1436, 1498, 1517
SmoI CTYRAG 5 cut(s) 712, 1390, 1436, 1498, 1517
SsiI CCGC 8 cut(s) 530, 638, 672, 816, 941, 984, 1026, 1695
SspI AATATT 1 cut(s) 471
SspMI CTAG 1 cut(s) 311
StyD4I CCNGG 2 cut(s) 831, 920
StyI CCWWGG 2 cut(s) 289, 1684
TaaI ACNGT 3 cut(s) 385, 486, 586
TaiI ACGT 4 cut(s) 44, 908, 969, 1065
TaqI TCGA 7 cut(s) 615, 713, 827, 851, 1363, 1916, 1936
TaqII GACCGA 1 cut(s) 916
TatI WGTACW 2 cut(s) 1900, 1942
TauI GCSGC 2 cut(s) 641, 819
TfiI GAWTC 5 cut(s) 1159, 1292, 1414, 1558, 1583
Tru1I TTAA 7 cut(s) 29, 68, 180, 257, 360, 1056, 1887
Tru9I TTAA 7 cut(s) 29, 68, 180, 257, 360, 1056, 1887
TscAI CASTG 4 cut(s) 164, 181, 800, 1014
TseFI GTSAC 5 cut(s) 275, 306, 1124, 1449, 1481
TseI GCWGC 6 cut(s) 147, 625, 648, 1034, 1177, 1503
Tsp45I GTSAC 5 cut(s) 275, 306, 1124, 1449, 1481
TspDTI ATGAA 5 cut(s) 1074, 1154, 1284, 1414, 1659
TspRI CASTG 4 cut(s) 164, 181, 800, 1014
VpaK11BI GGWCC 1 cut(s) 427
XapI RAATTY 8 cut(s) 169, 356, 414, 1100, 1114, 1421, 1723, 1799
XhoI CTCGAG 1 cut(s) 712
XspI CTAG 1 cut(s) 311
ZrmI AGTACT 2 cut(s) 1902, 1944
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.