Rmu_sc0004976.1_g000024

Leucine rich repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004976.1
OG0000024
Physical Location & Seq
Forward (+)
93079 .. 96276
3198 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004976.1_g000024.1.cds

Sequence Viewer

Length: 3198 bp
atgatggaagatgatgctcagttctttgtctataaaagagtcttaagttctctgttatgtgaaacccacagacctacatacacatataccaaggaaacagaatttttcatgggaaaggaaatgggatcatcctggtggggcttcttttctgtgcgttatatcatgctgttgttgctcattaatgttgcatgctgtttttcactttgccacgatgatgagcgctctgccttgttgcaattcaaagctagtttcactatagacgagtctgcttcccaagatccctttgcttatccgaaagttgcatattggggtaggctagaagaatatcctcaaaggagtaactgttgttcatgggatggtgttgaatgcaaccacgaatctggccatgttattggccttgacctcgccagcagctatctacatggttccatcaactccaatagcagtctttttcaacttgttcagttgcagagacttgacctctctgacaacaacttcaggtactctcaaataccatccaggttaggccatgatctgactagtctaacatatctcaacctttcaatatcttcattttctggccaaattccatcagaaatttcatatctatccaagctgtctgcccttgatctgtcttctaattacgagtctcatctcaatatgtccaacttcagaagcctagttcagaacttgaccaacataaaactacttcatcttaattgggtagagataggctgtacaatgcctaatacattggtgaatgtgtcttctctcacatctctcaatcttcgagcatgtaaattggaggggaaattcccaatagacattttccacttaccaaacttgcaagtacttgatttggcctataactctgatctaatcggttaccttcctgatgagcttaacaagagcagtcccttaaagatactgaatttgcggtcaaccaatttctctggtcatctacctgcttcaatcggagaccttcgtgcgttaaatttgttcaaaatagcatactgtaacttttatccccatgttccatcttcactttccaaccttacccagctcaatttccttcagctttcctcttttttcaacaagggtactttcagtggccaagttactgatccttggtcttgggttggaaagctgaccaaactcaactacttgtaccttgctgatgccaacttaaggggagatttcctatgttttttggctaatctgacgcaacttgtggaattagacttgagcgaaaatcaaataactggtgaaatcccatcttctttggctaatctgacacaactttcaaaattatccttgcgccagaatcaaataactggtgaagtcccatgtgttttggctaatctgaaacaactttcaatactgcgcttggaccaaaatcaaataactggtcaaatcccatcttgccttgggcagttgacccaattaactttgttagacatacgatgcaacaatctgcaaggagcaattcccaggtcactatttgagcttagaaatcttgaatatatatacctcgactcaaataacttgagtgggtatgttgaatttgatgggttttccaagctcgaaaagttgagggtacttcgtttgtcactcaacaagttaaatgtgaagatcaaaagtggatttactgctattcctccaaagcttcaagtactaggattgagttcatgcaacttaacagagtttcctgaattcttaaaatacactagtaaactggtggatctagatctagctgataacaatcttcacggccaaataccaaaatggatgtggaattcaaccagtgaaactttttcgtatctcaacctctctcacaaccacttaactggatttgaagaaaatccagtcatcattccatggccacggttaaagtctttagagctcgactctaacatgttacgaggatcattgccaattccaggaccgtcaatggtagtctattctgtttcagacaatgaatacacaggagaaattccagcaacattctgcaacacaattatggagaccctatttattcttgatttgtctaacaacaacctgaatggcatgattcccgaatgttttgagaatctcagctatcttcggatattgaaactgcagaacaattcttttcacggggatattcctcgaataggttcaaacaaatgcaggtggttaagagggattgacttgagttataatcagctacaagggaagctaccaagatcaattgccaattgtcctctgttgaggtttcttaatttgggaaataatcagatcagtgataccttcccatcttggttaggaacacttcaacaattaaaagttctcattttgcggtccaatgcatttcatggcataattgggaagcctgcaagtagtcatgagtttcctgtgctgtccatcattgatttatctagcaatgatttttcaagtatgttgccctccgactacatggagaactggaatgccatgatatctgttgatgcaaacgagatatacatccaatatattgtcttcatcgatgggatgtataaagaatggttctactatgattacgcgattacagtctttggaaaaggtcttgagttgaagtatttcaagaccccttatcttttgacactcatagacctctcaagtaacagatttgaaggacagattccaggtatcattgggaatctaagagggcttcaattgctcaatctttccaacaacactctcactggtcccatcccctcttctttggagaacttgactgctcttgaatcgctggatctctcccaaaatcagctctcaggaaagctccccggtgatctggcgcaactgacattcctttcatactttaatgtatcccataatcgtctttcggggtccattccacaaggtcgacaatttgatacattccaagaggatatgtaccaaggaaactcaggtttgtgtggaaaacctttgccaaaggaatgtgaagattctgagagcacaacaccacaaacatcaagctttgaacaagacgaagactctggatttcaaattgaactagattggtttgtggttctgccaggagttgttgctggtctaatagttggagtggttgggggggatttttggacaaccaagaagcatgactggtttgtagagacaatcagcaggaggaggcagccgagaggcataaggcggacgaggggactcagaacttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1065

Amino Acids

120.26

Weight (kDa)

5.56

Isoelectric Point (pI)

38.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2199
AarI CACCTGC 1 cut(s) 2160
Acc36I ACCTGC 2 cut(s) 973, 2160
AccI GTMKAC 1 cut(s) 2887
AccII CGCG 1 cut(s) 2561
AciI CCGC 3 cut(s) 937, 2338, 3175
AclWI GGATC 6 cut(s) 133, 272, 1118, 1749, 1933, 2781
AcoI YGGCCR 5 cut(s) 382, 580, 1111, 1771, 1880
AcuI CTGAAG 3 cut(s) 481, 655, 1058
AfaI GTAC 8 cut(s) 503, 739, 852, 1102, 1169, 1599, 1674, 2918
AfeI AGCGCT 1 cut(s) 221
AfiI CCNNNNNNNGG 3 cut(s) 1188, 1940, 2153
AflII CTTAAG 2 cut(s) 43, 1186
AflIII ACRYGT 1 cut(s) 1914
AhlI ACTAGT 2 cut(s) 539, 1727
AjnI CCWGG 6 cut(s) 131, 518, 1490, 1939, 2662, 3058
Alw21I GWGCWC 2 cut(s) 1905, 2981
Alw26I GTCTC 5 cut(s) 466, 654, 972, 2018, 3131
AlwI GGATC 6 cut(s) 133, 272, 1118, 1749, 1933, 2781
Aor51HI AGCGCT 1 cut(s) 221
AoxI GGCC 8 cut(s) 382, 394, 526, 580, 861, 1111, 1771, 1880
ApeKI GCWGC 2 cut(s) 411, 3157
ArsI GACNNNNNNTTYG 2 cut(s) 1393, 1425
AseI ATTAAT 1 cut(s) 180
Asp700I GAANNNNTTC 2 cut(s) 2155, 2597
AspLEI GCGC 4 cut(s) 222, 1320, 1386, 2821
AspS9I GGNCC 5 cut(s) 1390, 1943, 2340, 2726, 2871
AsuC2I CCSGG 1 cut(s) 2808
AsuHPI GGTGA 4 cut(s) 769, 1277, 1349, 2822
AvaII GGWCC 5 cut(s) 1390, 1943, 2340, 2726, 2871
BalI TGGCCA 4 cut(s) 384, 582, 1113, 1882
BanII GRGCYC 1 cut(s) 1905
BbsI GAAGAC 4 cut(s) 627, 759, 2509, 3021
Bbv12I GWGCWC 2 cut(s) 1905, 2981
BbvI GCAGC 2 cut(s) 423, 3169
BceAI ACGGC 1 cut(s) 1786
BciT130I CCWGG 6 cut(s) 133, 520, 1492, 1941, 2664, 3060
BciVI GTATCC 1 cut(s) 2860
BcnI CCSGG 1 cut(s) 2808
BcoDI GTCTC 5 cut(s) 466, 654, 972, 2018, 3131
BcuI ACTAGT 2 cut(s) 539, 1727
BfmI CTRYAG 2 cut(s) 255, 2117
BfoI RGCGCY 1 cut(s) 223
BfrI CTTAAG 2 cut(s) 43, 1186
BfuAI ACCTGC 2 cut(s) 973, 2160
BfuI GTATCC 1 cut(s) 2860
BglII AGATCT 1 cut(s) 1747
BisI GCNGC 2 cut(s) 412, 3158
BlsI GCNGC 2 cut(s) 413, 3159
BmcAI AGTACT 2 cut(s) 852, 1674
Bme1390I CCNGG 7 cut(s) 133, 520, 1492, 1941, 2664, 2808, 3060
Bme18I GGWCC 5 cut(s) 1390, 1943, 2340, 2726, 2871
BmgT120I GGNCC 5 cut(s) 1390, 1943, 2340, 2726, 2871
BmiI GGNNCC 3 cut(s) 427, 2728, 2872
BmrFI CCNGG 7 cut(s) 133, 520, 1492, 1941, 2664, 2808, 3060
BmsI GCATC 4 cut(s) 4, 1168, 1454, 2476
BpiI GAAGAC 4 cut(s) 627, 759, 2509, 3021
BplI GAGNNNNNCTC 2 cut(s) 1892, 1924
BpuEI CTTGAG 5 cut(s) 1264, 1567, 2212, 2606, 2620
BpuMI CCSGG 1 cut(s) 2808
Bsa29I ATCGAT 1 cut(s) 2523
BsaBI GATNNNNATC 3 cut(s) 1746, 1761, 2501
BsaI GGTCTC 2 cut(s) 972, 2018
BsaJI CCNNGG 8 cut(s) 90, 1127, 1426, 1490, 1877, 1883, 2806, 2920
BsaXI ACNNNNNCTCC 2 cut(s) 328, 358
Bsc4I CCNNNNNNNGG 3 cut(s) 1188, 1940, 2153
Bse3DI GCAATG 2 cut(s) 1928, 2428
Bse8I GATNNNNATC 3 cut(s) 1746, 1761, 2501
BseBI CCWGG 6 cut(s) 133, 520, 1492, 1941, 2664, 3060
BseCI ATCGAT 1 cut(s) 2523
BseDI CCNNGG 8 cut(s) 90, 1127, 1426, 1490, 1877, 1883, 2806, 2920
BseGI GGATG 7 cut(s) 128, 361, 515, 1794, 2502, 2535, 2730
BseJI GATNNNNATC 3 cut(s) 1746, 1761, 2501
BseLI CCNNNNNNNGG 3 cut(s) 1188, 1940, 2153
BseMI GCAATG 2 cut(s) 1928, 2428
BseMII CTCAG 5 cut(s) 32, 2107, 2808, 2943, 2964
BseRI GAGGAG 1 cut(s) 3166
BseXI GCAGC 2 cut(s) 423, 3169
BseYI CCCAGC 1 cut(s) 1059
Bsh1236I CGCG 1 cut(s) 2561
BshFI GGCC 8 cut(s) 384, 396, 528, 582, 863, 1113, 1773, 1882
BshVI ATCGAT 1 cut(s) 2523
BsiHKAI GWGCWC 2 cut(s) 1905, 2981
BsiSI CCGG 1 cut(s) 2808
BslFI GGGAC 3 cut(s) 900, 1328, 2712
BslI CCNNNNNNNGG 3 cut(s) 1188, 1940, 2153
BsmAI GTCTC 5 cut(s) 466, 654, 972, 2018, 3131
BsmFI GGGAC 3 cut(s) 900, 1328, 2712
BsmI GAATGC 2 cut(s) 371, 2473
BsnI GGCC 8 cut(s) 384, 396, 528, 582, 863, 1113, 1773, 1882
Bso31I GGTCTC 2 cut(s) 972, 2018
Bsp1286I GDGCHC 2 cut(s) 1905, 2981
Bsp1407I TGTACA 1 cut(s) 737
Bsp19I CCATGG 1 cut(s) 1877
BspACI CCGC 3 cut(s) 937, 2338, 3175
BspANI GGCC 8 cut(s) 384, 396, 528, 582, 863, 1113, 1773, 1882
BspCNI CTCAG 5 cut(s) 31, 2106, 2807, 2942, 2965
BspDI ATCGAT 1 cut(s) 2523
BspFNI CGCG 1 cut(s) 2561
BspHI TCATGA 1 cut(s) 2383
BspLI GGNNCC 3 cut(s) 427, 2728, 2872
BspMAI CTGCAG 1 cut(s) 2121
BspMI ACCTGC 2 cut(s) 973, 2160
BspPI GGATC 6 cut(s) 133, 272, 1118, 1749, 1933, 2781
BspTI CTTAAG 2 cut(s) 43, 1186
BspTNI GGTCTC 2 cut(s) 972, 2018
BsrDI GCAATG 2 cut(s) 1928, 2428
BsrGI TGTACA 1 cut(s) 737
BssECI CCNNGG 8 cut(s) 90, 1127, 1426, 1490, 1877, 1883, 2806, 2920
BssT1I CCWWGG 5 cut(s) 90, 1127, 1426, 1877, 2920
Bst2UI CCWGG 6 cut(s) 133, 520, 1492, 1941, 2664, 3060
Bst4CI ACNGT 5 cut(s) 344, 1016, 1887, 1947, 2569
Bst6I CTCTTC 1 cut(s) 2743
BstAFI CTTAAG 2 cut(s) 43, 1186
BstAUI TGTACA 1 cut(s) 737
BstC8I GCNNGC 3 cut(s) 190, 409, 2373
BstDEI CTNAG 9 cut(s) 18, 1508, 2093, 2681, 2794, 2929, 2973, 3188, 3195
BstDSI CCRYGG 2 cut(s) 1877, 1883
BstEII GGTNACC 1 cut(s) 884
BstENI CCTNNNNNAGG 1 cut(s) 2151
BstF5I GGATG 7 cut(s) 128, 361, 515, 1794, 2502, 2535, 2730
BstFNI CGCG 1 cut(s) 2561
BstH2I RGCGCY 1 cut(s) 223
BstHHI GCGC 4 cut(s) 222, 1320, 1386, 2821
BstMAI GTCTC 5 cut(s) 466, 654, 972, 2018, 3131
BstMWI GCNNNNNNNGC 2 cut(s) 172, 2695
BstNI CCWGG 6 cut(s) 133, 520, 1492, 1941, 2664, 3060
BstNSI RCATGY 3 cut(s) 192, 798, 1918
BstPI GGTNACC 1 cut(s) 884
BstSCI CCNGG 7 cut(s) 131, 518, 1490, 1939, 2662, 2806, 3058
BstSFI CTRYAG 2 cut(s) 255, 2117
BstUI CGCG 1 cut(s) 2561
BstV1I GCAGC 2 cut(s) 423, 3169
BstV2I GAAGAC 4 cut(s) 627, 759, 2509, 3021
BstX2I RGATCY 4 cut(s) 277, 1741, 1747, 2773
BstXI CCANNNNNNTGG 3 cut(s) 380, 392, 1847
BstYI RGATCY 4 cut(s) 277, 1741, 1747, 2773
Bsu15I ATCGAT 1 cut(s) 2523
BsuI GTATCC 1 cut(s) 2860
BsuRI GGCC 8 cut(s) 384, 396, 528, 582, 863, 1113, 1773, 1882
BsuTUI ATCGAT 1 cut(s) 2523
BtgI CCRYGG 2 cut(s) 1877, 1883
BtsCI GGATG 7 cut(s) 128, 361, 515, 1794, 2502, 2535, 2730
BtsIMutI CAGTG 4 cut(s) 1114, 1810, 2287, 2721
BveI ACCTGC 2 cut(s) 973, 2160
Cac8I GCNNGC 3 cut(s) 190, 409, 2373
CciI TCATGA 1 cut(s) 2383
CfoI GCGC 4 cut(s) 222, 1320, 1386, 2821
Cfr13I GGNCC 5 cut(s) 1390, 1943, 2340, 2726, 2871
ClaI ATCGAT 1 cut(s) 2523
CseI GACGC 1 cut(s) 1231
Csp6I GTAC 8 cut(s) 502, 738, 851, 1101, 1168, 1598, 1673, 2917
CviQI GTAC 8 cut(s) 502, 738, 851, 1101, 1168, 1598, 1673, 2917
DdeI CTNAG 9 cut(s) 18, 1508, 2093, 2681, 2794, 2929, 2973, 3188, 3195
EaeI YGGCCR 5 cut(s) 382, 580, 1111, 1771, 1880
Eam1104I CTCTTC 1 cut(s) 2743
EarI CTCTTC 1 cut(s) 2743
EciI GGCGGA 1 cut(s) 3190
Ecl136II GAGCTC 1 cut(s) 1903
Eco130I CCWWGG 5 cut(s) 90, 1127, 1426, 1877, 2920
Eco24I GRGCYC 1 cut(s) 1905
Eco31I GGTCTC 2 cut(s) 972, 2018
Eco32I GATATC 1 cut(s) 2478
Eco47I GGWCC 5 cut(s) 1390, 1943, 2340, 2726, 2871
Eco47III AGCGCT 1 cut(s) 221
Eco53kI GAGCTC 1 cut(s) 1903
Eco57I CTGAAG 3 cut(s) 481, 655, 1058
Eco91I GGTNACC 1 cut(s) 884
EcoICRI GAGCTC 1 cut(s) 1903
EcoNI CCTNNNNNAGG 1 cut(s) 2151
EcoO65I GGTNACC 1 cut(s) 884
EcoRI GAATTC 2 cut(s) 1712, 1795
EcoRII CCWGG 6 cut(s) 131, 518, 1490, 1939, 2662, 3058
EcoRV GATATC 1 cut(s) 2478
EcoT14I CCWWGG 5 cut(s) 90, 1127, 1426, 1877, 2920
EcoT22I ATGCAT 1 cut(s) 2350
EcoT38I GRGCYC 1 cut(s) 1905
ErhI CCWWGG 5 cut(s) 90, 1127, 1426, 1877, 2920
FaqI GGGAC 3 cut(s) 900, 1328, 2712
FblI GTMKAC 1 cut(s) 2887
Fnu4HI GCNGC 2 cut(s) 412, 3158
FokI GGATG 7 cut(s) 115, 368, 502, 1801, 2489, 2542, 2717
FriOI GRGCYC 1 cut(s) 1905
Fsp4HI GCNGC 2 cut(s) 412, 3158
GlaI GCGC 4 cut(s) 221, 1319, 1385, 2820
GluI GCNGC 2 cut(s) 412, 3158
GsaI CCCAGC 1 cut(s) 1063
HaeII RGCGCY 1 cut(s) 223
HaeIII GGCC 8 cut(s) 384, 396, 528, 582, 863, 1113, 1773, 1882
HapII CCGG 1 cut(s) 2808
HgaI GACGC 1 cut(s) 1231
HhaI GCGC 4 cut(s) 222, 1320, 1386, 2821
Hin6I GCGC 4 cut(s) 220, 1318, 1384, 2819
HinP1I GCGC 4 cut(s) 220, 1318, 1384, 2819
HincII GTYRAC 3 cut(s) 942, 1437, 2888
HindII GTYRAC 3 cut(s) 942, 1437, 2888
HindIII AAGCTT 2 cut(s) 1664, 2998
HpaII CCGG 1 cut(s) 2808
HphI GGTGA 4 cut(s) 769, 1277, 1349, 2822
Hpy166II GTNNAC 4 cut(s) 942, 1437, 1733, 2888
Hpy8I GTNNAC 4 cut(s) 942, 1437, 1733, 2888
HpyAV CCTTC 5 cut(s) 899, 992, 1082, 2299, 2645
HpyCH4III ACNGT 5 cut(s) 344, 1016, 1887, 1947, 2569
HpyF10VI GCNNNNNNNGC 2 cut(s) 172, 2695
HpyF3I CTNAG 9 cut(s) 18, 1508, 2093, 2681, 2794, 2929, 2973, 3188, 3195
HspAI GCGC 4 cut(s) 220, 1318, 1384, 2819
LmnI GCTCC 2 cut(s) 1481, 2808
Lsp1109I GCAGC 2 cut(s) 423, 3169
LweI GCATC 4 cut(s) 4, 1168, 1454, 2476
MaeIII GTNAC 8 cut(s) 338, 884, 1016, 1117, 1494, 1608, 1917, 2639
MfeI CAATTG 3 cut(s) 2229, 2236, 2693
MflI RGATCY 4 cut(s) 277, 1741, 1747, 2773
MhlI GDGCHC 2 cut(s) 1905, 2981
MlsI TGGCCA 4 cut(s) 384, 582, 1113, 1882
MluNI TGGCCA 4 cut(s) 384, 582, 1113, 1882
MlyI GAGTC 7 cut(s) 48, 272, 656, 1529, 1901, 3011, 3180
MmeI TCCRAC 6 cut(s) 690, 1074, 1120, 2472, 2733, 3064
Mox20I TGGCCA 4 cut(s) 384, 582, 1113, 1882
Mph1103I ATGCAT 1 cut(s) 2350
MroXI GAANNNNTTC 2 cut(s) 2155, 2597
MscI TGGCCA 4 cut(s) 384, 582, 1113, 1882
MslI CAYNNNNRTG 3 cut(s) 133, 213, 2018
Msp20I TGGCCA 4 cut(s) 384, 582, 1113, 1882
MspCI CTTAAG 2 cut(s) 43, 1186
MspI CCGG 1 cut(s) 2808
MspR9I CCNGG 7 cut(s) 133, 520, 1492, 1941, 2664, 2808, 3060
MunI CAATTG 3 cut(s) 2229, 2236, 2693
Mva1269I GAATGC 2 cut(s) 371, 2473
MvaI CCWGG 6 cut(s) 133, 520, 1492, 1941, 2664, 3060
MvnI CGCG 1 cut(s) 2561
MwoI GCNNNNNNNGC 2 cut(s) 172, 2695
NciI CCSGG 1 cut(s) 2808
NcoI CCATGG 1 cut(s) 1877
NlaIV GGNNCC 3 cut(s) 427, 2728, 2872
NmeAIII GCCGAG 1 cut(s) 3186
NmuCI GTSAC 2 cut(s) 1494, 1608
NsiI ATGCAT 1 cut(s) 2350
NspI RCATGY 3 cut(s) 192, 798, 1918
PaeI GCATGC 1 cut(s) 192
PagI TCATGA 1 cut(s) 2383
PaqCI CACCTGC 1 cut(s) 2160
PciI ACATGT 1 cut(s) 1914
PctI GAATGC 2 cut(s) 371, 2473
PdmI GAANNNNTTC 2 cut(s) 2155, 2597
PfeI GAWTC 8 cut(s) 377, 1324, 2071, 2089, 2659, 2677, 2765, 2969
PfoI TCCNGGA 1 cut(s) 1939
PkrI GCNGC 2 cut(s) 413, 3159
PleI GAGTC 7 cut(s) 47, 271, 655, 1529, 1901, 3011, 3180
PpsI GAGTC 7 cut(s) 47, 271, 655, 1529, 1901, 3011, 3180
PscI ACATGT 1 cut(s) 1914
PshBI ATTAAT 1 cut(s) 180
PsiI TTATAA 1 cut(s) 2199
Psp124BI GAGCTC 1 cut(s) 1905
Psp6I CCWGG 6 cut(s) 131, 518, 1490, 1939, 2662, 3058
PspEI GGTNACC 1 cut(s) 884
PspFI CCCAGC 1 cut(s) 1059
PspGI CCWGG 6 cut(s) 131, 518, 1490, 1939, 2662, 3058
PspN4I GGNNCC 3 cut(s) 427, 2728, 2872
PspPI GGNCC 5 cut(s) 1390, 1943, 2340, 2726, 2871
PsrI GAACNNNNNNTAC 2 cut(s) 331, 363
PstI CTGCAG 1 cut(s) 2121
PsuI RGATCY 4 cut(s) 277, 1741, 1747, 2773
RsaI GTAC 8 cut(s) 503, 739, 852, 1102, 1169, 1599, 1674, 2918
RsaNI GTAC 8 cut(s) 502, 738, 851, 1101, 1168, 1598, 1673, 2917
RseI CAYNNNNRTG 3 cut(s) 133, 213, 2018
SacI GAGCTC 1 cut(s) 1905
SalI GTCGAC 1 cut(s) 2886
SatI GCNGC 2 cut(s) 412, 3158
Sau96I GGNCC 5 cut(s) 1390, 1943, 2340, 2726, 2871
ScaI AGTACT 2 cut(s) 852, 1674
SchI GAGTC 7 cut(s) 48, 272, 656, 1529, 1901, 3011, 3180
ScrFI CCNGG 7 cut(s) 133, 520, 1492, 1941, 2664, 2808, 3060
SduI GDGCHC 2 cut(s) 1905, 2981
SfaNI GCATC 4 cut(s) 4, 1168, 1454, 2476
SfcI CTRYAG 2 cut(s) 255, 2117
SinI GGWCC 5 cut(s) 1390, 1943, 2340, 2726, 2871
SmiMI CAYNNNNRTG 3 cut(s) 133, 213, 2018
SmlI CTYRAG 7 cut(s) 43, 1186, 1243, 1546, 2191, 2585, 2635
SmoI CTYRAG 7 cut(s) 43, 1186, 1243, 1546, 2191, 2585, 2635
SpeI ACTAGT 2 cut(s) 539, 1727
SphI GCATGC 1 cut(s) 192
SsiI CCGC 3 cut(s) 937, 2338, 3175
SstI GAGCTC 1 cut(s) 1905
StyD4I CCNGG 7 cut(s) 131, 518, 1490, 1939, 2662, 2806, 3058
StyI CCWWGG 5 cut(s) 90, 1127, 1426, 1877, 2920
TaaI ACNGT 5 cut(s) 344, 1016, 1887, 1947, 2569
TaqI TCGA 7 cut(s) 790, 1533, 1584, 1905, 2149, 2523, 2887
TatI WGTACW 3 cut(s) 737, 850, 1672
TfiI GAWTC 8 cut(s) 377, 1324, 2071, 2089, 2659, 2677, 2765, 2969
TscAI CASTG 4 cut(s) 1114, 1810, 2287, 2728
TseFI GTSAC 2 cut(s) 1494, 1608
TseI GCWGC 2 cut(s) 411, 3157
Tsp45I GTSAC 2 cut(s) 1494, 1608
TspRI CASTG 4 cut(s) 1114, 1810, 2287, 2728
Vha464I CTTAAG 2 cut(s) 43, 1186
VpaK11BI GGWCC 5 cut(s) 1390, 1943, 2340, 2726, 2871
VspI ATTAAT 1 cut(s) 180
XagI CCTNNNNNAGG 1 cut(s) 2151
XbaI TCTAGA 1 cut(s) 1744
XceI RCATGY 3 cut(s) 192, 798, 1918
XcmI CCANNNNNNNNNTGG 1 cut(s) 1788
XmiI GTMKAC 1 cut(s) 2887
XmnI GAANNNNTTC 2 cut(s) 2155, 2597
ZrmI AGTACT 2 cut(s) 852, 1674
Zsp2I ATGCAT 1 cut(s) 2350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.