RchiOBHm_Chr1g0340521

receptor-like protein 12

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
32031173 .. 32034551
3379 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56730

Sequence Viewer

Length: 3213 bp
ATGGGGTTATCATCTCTATGCTTAATAACTGTGTCCATCTATATCCTTTCAACAATTGTGTTGTTCCATCTTGTGGTGGCCAGCTCTTTGCAGTCATATAATACTCCTACTTGCCATGATGATGAGATCTCTGCCTTGCTTCAATTTAAGCAAAGCTTTGTCATTAGAAAGTTTGCTTCAGTCAAGGGTGCTTATCCAAAGATCTCTTCATGGAAATCAAACAGCAGTTGTTGCTCATGGGATGGCGTAGTGTGTGATGAGAAGACGGGTCATGTGATTGGGCTTGATCTTGGTAGCAGTTGTCTCTATGGCTCTTTCAGCTCCAACAACACCTTATTCAGTCTTGTTCATCTTCAGCGTCTGAACCTCGCAGATAATGATTTCAATTTCTCTCAAATTCCTACTAGCATTAGGAACTTCCCAAGGCTCAGGTATCTCAACCTCTCTTTCTCTGTCTTTTCTGGTCGTGTCCCATCTGAAGTTTCACAACTCTCTAAGTTGTCTTCCCTCGATCTATCTCGCAATGATGGTATGTTTTCGAATGAAGAATTGTTGAGAAGCCTAGCTCAAAATTTAACTGGCCTACAAACACTTGATCTTTCTTCCATTAATATATCATCCACAATACCCGAAACCCTGACAAATTTGTCTCTTTTGACATCCCTCACCCTTGATGATTGCGGCCTCTTTGGCAAATTACCAGGAAGAATCTTTAAATTACAGAATTTGAAGGTTCTTAGTGTGAGGTACAACCCTGCTCTCACGGGGATATTTTCCAATGAAGAATTGTTAAGAAGCCCAGCTCAAAATTTAACTAGCCTAGAAACACTAGATCTTTCTGGGATTAACATATCATCCACGGTACCCGACACCCTGACATATTTGTCTCTTTTGACATCCCTCATCCTTGATAACTGCGGCCTGTCTGGCAAATTCCCAGGAAGAATCTTTAAATTACAGAATTTGAAGGTTCTTAGTGTGAGCAACAACCCTGCTCTCACGGGGTATTTTCCTGATAACTATAGTGGAAGTAGTCCTGATCTCATGTCACTCAAACTCTCGTCCACTAATTTTTTCATAAACCTGCCTTCTTTGATAGAAAGGTTTCCTTCACTGAAAGAGTTGGCTGTGAGTTCATGCAATATTTCAGAAGGTCCAGTACCACTGTCACTTGGTAATCTTAGGGATCTCATCTATTTGGACCTTTCATATAATAAGTTTAATGGTCAAATCCCTACAGCTACACTTGGTAATCTTAGGGATCTCATCTATTTGGACCTTTCAGATAATAAGTTTAATGGTCAAGTACCATTTTCACTTGGTAATCTTAGGAATCTCATCCATTTGGACCTTTCAGATAATAAGTTTAATGGTCGAGTACCATTTTCACTTGGTAATCTTAGGGATCTCACCTATTTGGACCTTTCATATAATAAGTTTAATGGTCAAATCCCTACAACGTTGGGAAACCTTACCCAACTTACATATCTATCACTTTATAATAACCATTTTCATGGTTCAGTCCCCCAGTCCTTATTCAATCTCATCAATCTTCAAACCCTTTATCTAGATCATAATAATTTGAGTGGCACAGTAGATTTCCAAAAATTTCTTAACCTACAAAAACTCACCGATCTAGATCTATCCAATAATAATCTGGAATTGCTCTCAGAATCTAGATTTTTGAATAATGCAACTACTGTACTTCCAAAGTTTGTGTATCTAAGATTGGGTGGGTGCAACATAAGAGAGTTCCCAGATTTCCTAAGATCTCAAGAAGCGTTGTCATATTTAGATCTCTCTGGAAACAAATTGCAAGGCCAAGTACCAAAATGGATGTGGAACACAAGCACTCAAACTCTGAATGACTTTAACATTTCTCATAACTTGCTGTCAGGCTTCGAGAAATCTCCAGTTGTCCTTCCATGGCTTAACCTTGAATACTTAGACCTGTCATTCAACATGTTTCATGATTTATTACTGTTACCTTCAACATCCATCATCAAGTACTATAACATTGCAAACAACAAATTAACCAGACGAGTTTCACCAATGATTTGCAATATGACTTCTCTTGAATATCTTGATTTGTCAAACAACAAGTTGATTGGCGATCTACCTCATTGTGGGAGAAATTTCAGTGTTAATCTGGAATATCTCAAACTTGGAAACAACTCATTTCAAGGAAATCTTCCTCAATCATACTTCAATGGAAGCAATTTAAGGATGATGGATATCAGTCACAACAGTTTCCAGGGGCAACTACCGAGGTCACTAGCGAATTGTGCAAGTCTTGAAAGTTTAGTCCTTTCACACAATAATTTTGGTGATACCTTCCCTGTTTGGTTGGGGGCTCTCCCTGAGTTGAAAATTTTGAAAATGGACCACAATGTGTTCTATGGAGTGATTCTGAAACATGATAAGAAGAATCTTCAATTCCCGGTGCTGCGTATTCTTGATTTGTCTTACAATGATTTCTCAGGTCAGTTTCCATTTGAATACATTTTTTCTGGAAATGGGACTACAAGTATCACTCATGATTTGGAGTATTACAACATCAATTCATTTCCTGGTGGGTATTACTCAATCACGATAATCTGTAAAGGTGTGGAGAGATACTACCCAAGAATTCGAGAGGACTTGATACTCATTGACATCTCAAGCAACAATTTTGAAGGGAAGATTCCTGAATACATTGGGAAACTTCAGGGGATTTGGTCAGTCAATCTCTCCAATAACATTCTCACCGGTCGCATCCCATCATCCTTGAGCAACTTATCAAGGCTTGAATCATTGGACCTTTCACATAACAAGCTCTCTGGTGAGATTCCTCAGCAACTGGCACAACTTGATTCTCTCTCAAAGTTCAATGTCTCTCACAACAATCTCACAGGACCTGTACCACGGGGAATCCACTTCACTACATTTGACAGCACTTCATATCTGGGAAACCAAGGATTGTGCGGAGATCTATTGCCCAAGAAATGTGGAAATTCTGTGGGCACTCAACTTCCACCTTCAACATCAGAAGATAATGACTCGGGCTCTGGAATTGAATTGGATTGGAAATTTGTTGTGGCAGGGTCAGGGAGTGGCTTGTTGGTGGGAGTGGTTCTTGCAGACTTTGTGATTACCAAGTGGAATGTGTGGTTCATTGAGATTGTTGCAGTACTGATCGTGTTTTCAAAAAGGATAAGGAAGCCTAGAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1070

Amino Acids

119.3

Weight (kDa)

6.46

Isoelectric Point (pI)

41.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 39 - 86 7.3e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 375 - 601 5.1e-18 Leucine-rich repeat region
LRR_8 PF13855 716 - 775 5.7e-09 Leucine rich repeat
LRR_8 PF13855 907 - 963 3.6e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1500
AasI GACNNNNNNGTC 2 cut(s) 646, 883
Acc36I ACCTGC 1 cut(s) 1092
Acc65I GGTACC 1 cut(s) 862
AccB1I GGYRCC 1 cut(s) 862
AccB7I CCANNNNNTGG 1 cut(s) 73
AciI CCGC 3 cut(s) 681, 918, 2964
AclI AACGTT 1 cut(s) 1460
AclWI GGATC 3 cut(s) 1194, 1269, 1413
AcoI YGGCCR 1 cut(s) 78
AcuI CTGAAG 4 cut(s) 162, 338, 498, 2690
AdeI CACNNNGTG 1 cut(s) 2392
AfiI CCNNNNNNNGG 2 cut(s) 73, 2126
AflIII ACRYGT 1 cut(s) 1962
AgeI ACCGGT 1 cut(s) 2747
AjnI CCWGG 4 cut(s) 700, 937, 2253, 2569
AjuI GAANNNNNNNTTGG 2 cut(s) 190, 222
AluBI AGCT 7 cut(s) 84, 156, 321, 566, 803, 1241, 2815
AluI AGCT 7 cut(s) 84, 156, 321, 566, 803, 1241, 2815
Alw26I GTCTC 4 cut(s) 308, 654, 891, 2878
AlwI GGATC 3 cut(s) 1194, 1269, 1413
AlwNI CAGNNNCTG 3 cut(s) 361, 2839, 2897
Ama87I CYCGRG 1 cut(s) 3040
AoxI GGCC 5 cut(s) 78, 580, 682, 919, 1819
ApeKI GCWGC 1 cut(s) 2446
AseI ATTAAT 1 cut(s) 609
AsiGI ACCGGT 1 cut(s) 2747
Asp700I GAANNNNTTC 1 cut(s) 1104
Asp718I GGTACC 1 cut(s) 862
AspS9I GGNCC 8 cut(s) 1154, 1201, 1276, 1348, 1420, 2383, 2797, 2894
AsuC2I CCSGG 1 cut(s) 2441
AsuHPI GGTGA 7 cut(s) 658, 1402, 1621, 2040, 2339, 2737, 2834
AsuII TTCGAA 1 cut(s) 539
AvaI CYCGRG 1 cut(s) 3040
AvaII GGWCC 8 cut(s) 1154, 1201, 1276, 1348, 1420, 2383, 2797, 2894
BaeGI GKGCMC 1 cut(s) 3005
BalI TGGCCA 1 cut(s) 80
BanI GGYRCC 1 cut(s) 862
BanII GRGCYC 2 cut(s) 2356, 3047
BarI GAAGNNNNNNTAC 2 cut(s) 1143, 1175
BbsI GAAGAC 2 cut(s) 269, 495
BbvCI CCTCAGC 1 cut(s) 2832
BbvI GCAGC 1 cut(s) 2433
BccI CCATC 8 cut(s) 44, 75, 236, 481, 521, 2006, 2224, 2767
BciT130I CCWGG 4 cut(s) 702, 939, 2255, 2571
BcnI CCSGG 1 cut(s) 2441
BcoDI GTCTC 4 cut(s) 308, 654, 891, 2878
BfmI CTRYAG 2 cut(s) 1021, 1236
BfuAI ACCTGC 1 cut(s) 1092
BglI GCCNNNNNGGC 2 cut(s) 690, 927
BglII AGATCT 7 cut(s) 126, 201, 832, 1639, 1769, 1795, 2968
BisI GCNGC 3 cut(s) 682, 919, 2447
BlsI GCNGC 3 cut(s) 683, 920, 2448
BmcAI AGTACT 2 cut(s) 2009, 3171
Bme1390I CCNGG 5 cut(s) 702, 939, 2255, 2441, 2571
Bme18I GGWCC 8 cut(s) 1154, 1201, 1276, 1348, 1420, 2383, 2797, 2894
BmeT110I CYCGRG 1 cut(s) 3040
BmgT120I GGNCC 8 cut(s) 1154, 1201, 1276, 1348, 1420, 2383, 2797, 2894
BmiI GGNNCC 1 cut(s) 864
BmrFI CCNGG 5 cut(s) 702, 939, 2255, 2441, 2571
BmrI ACTGGG 1 cut(s) 1522
BmsI GCATC 1 cut(s) 2763
BmuI ACTGGG 1 cut(s) 1522
BpiI GAAGAC 2 cut(s) 269, 495
BpmI CTGGAG 1 cut(s) 1896
Bpu10I CCTNAGC 2 cut(s) 428, 2832
Bpu14I TTCGAA 1 cut(s) 539
BpuEI CTTGAG 3 cut(s) 1758, 2644, 2788
BpuMI CCSGG 1 cut(s) 2441
BsaBI GATNNNNATC 2 cut(s) 1638, 2234
BsaJI CCNNGG 8 cut(s) 422, 858, 937, 1925, 2254, 2267, 2903, 2953
BsaWI WCCGGW 1 cut(s) 2747
Bsc4I CCNNNNNNNGG 2 cut(s) 73, 2126
Bse118I RCCGGY 1 cut(s) 2747
Bse1I ACTGG 5 cut(s) 583, 1157, 1528, 1913, 2844
Bse3DI GCAATG 2 cut(s) 529, 2016
Bse8I GATNNNNATC 2 cut(s) 1638, 2234
BseBI CCWGG 4 cut(s) 702, 939, 2255, 2571
BseDI CCNNGG 8 cut(s) 422, 858, 937, 1925, 2254, 2267, 2903, 2953
BseJI GATNNNNATC 2 cut(s) 1638, 2234
BseLI CCNNNNNNNGG 2 cut(s) 73, 2126
BseMI GCAATG 2 cut(s) 529, 2016
BseMII CTCAG 5 cut(s) 442, 1683, 2352, 2493, 2846
BseNI ACTGG 5 cut(s) 583, 1157, 1528, 1913, 2844
BseSI GKGCMC 1 cut(s) 3005
BseXI GCAGC 1 cut(s) 2433
BseYI CCCAGC 1 cut(s) 799
Bsh1285I CGRYCG 1 cut(s) 2752
BshFI GGCC 5 cut(s) 80, 582, 684, 921, 1821
BshNI GGYRCC 1 cut(s) 862
BshTI ACCGGT 1 cut(s) 2747
BsiEI CGRYCG 1 cut(s) 2752
BsiHKCI CYCGRG 1 cut(s) 3040
BsiSI CCGG 2 cut(s) 2441, 2748
BslFI GGGAC 3 cut(s) 455, 1508, 2533
BslI CCNNNNNNNGG 2 cut(s) 73, 2126
BsmAI GTCTC 4 cut(s) 308, 654, 891, 2878
BsmFI GGGAC 3 cut(s) 455, 1508, 2533
BsnI GGCC 5 cut(s) 80, 582, 684, 921, 1821
BsoBI CYCGRG 1 cut(s) 3040
Bsp119I TTCGAA 1 cut(s) 539
Bsp1286I GDGCHC 3 cut(s) 2356, 3005, 3047
Bsp19I CCATGG 1 cut(s) 1925
BspACI CCGC 3 cut(s) 681, 918, 2964
BspANI GGCC 5 cut(s) 80, 582, 684, 921, 1821
BspCNI CTCAG 5 cut(s) 441, 1682, 2353, 2492, 2845
BspHI TCATGA 2 cut(s) 1969, 2536
BspLI GGNNCC 1 cut(s) 864
BspMI ACCTGC 1 cut(s) 1092
BspPI GGATC 3 cut(s) 1194, 1269, 1413
BspT104I TTCGAA 1 cut(s) 539
BspT107I GGYRCC 1 cut(s) 862
BsrDI GCAATG 2 cut(s) 529, 2016
BsrFI RCCGGY 1 cut(s) 2747
BsrI ACTGG 5 cut(s) 583, 1157, 1528, 1913, 2844
BssAI RCCGGY 1 cut(s) 2747
BssECI CCNNGG 8 cut(s) 422, 858, 937, 1925, 2254, 2267, 2903, 2953
BssT1I CCWWGG 3 cut(s) 422, 1925, 2953
Bst2UI CCWGG 4 cut(s) 702, 939, 2255, 2571
Bst4CI ACNGT 7 cut(s) 31, 862, 1167, 1594, 1702, 1983, 2249
Bst6I CTCTTC 1 cut(s) 211
BstAPI GCANNNNNTGC 1 cut(s) 231
BstBI TTCGAA 1 cut(s) 539
BstC8I GCNNGC 1 cut(s) 82
BstDSI CCRYGG 3 cut(s) 858, 1925, 2903
BstMAI GTCTC 4 cut(s) 308, 654, 891, 2878
BstMCI CGRYCG 1 cut(s) 2752
BstMWI GCNNNNNNNGC 5 cut(s) 231, 318, 690, 927, 2285
BstNI CCWGG 4 cut(s) 702, 939, 2255, 2571
BstNSI RCATGY 1 cut(s) 1966
BstSCI CCNGG 5 cut(s) 700, 937, 2253, 2439, 2569
BstSFI CTRYAG 2 cut(s) 1021, 1236
BstSLI GKGCMC 1 cut(s) 3005
BstV1I GCAGC 1 cut(s) 2433
BstV2I GAAGAC 2 cut(s) 269, 495
BstXI CCANNNNNNTGG 1 cut(s) 1514
BsuRI GGCC 5 cut(s) 80, 582, 684, 921, 1821
BtgI CCRYGG 3 cut(s) 858, 1925, 2903
BtsIMutI CAGTG 3 cut(s) 1112, 1163, 2146
BveI ACCTGC 1 cut(s) 1092
Cac8I GCNNGC 1 cut(s) 82
CaiI CAGNNNCTG 3 cut(s) 361, 2839, 2897
CciI TCATGA 2 cut(s) 1969, 2536
Cfr10I RCCGGY 1 cut(s) 2747
Cfr13I GGNCC 8 cut(s) 1154, 1201, 1276, 1348, 1420, 2383, 2797, 2894
CseI GACGC 1 cut(s) 347
CspAI ACCGGT 1 cut(s) 2747
CspCI CAANNNNNGTGG 2 cut(s) 2968, 3003
DraI TTTAAA 2 cut(s) 715, 952
DraIII CACNNNGTG 1 cut(s) 2392
DrdI GACNNNNNNGTC 2 cut(s) 646, 883
DseDI GACNNNNNNGTC 2 cut(s) 646, 883
EaeI YGGCCR 1 cut(s) 78
Eam1104I CTCTTC 1 cut(s) 211
EarI CTCTTC 1 cut(s) 211
Eco130I CCWWGG 3 cut(s) 422, 1925, 2953
Eco24I GRGCYC 2 cut(s) 2356, 3047
Eco32I GATATC 1 cut(s) 2236
Eco47I GGWCC 8 cut(s) 1154, 1201, 1276, 1348, 1420, 2383, 2797, 2894
Eco57I CTGAAG 4 cut(s) 162, 338, 498, 2690
Eco88I CYCGRG 1 cut(s) 3040
EcoO109I RGGNCCY 1 cut(s) 2894
EcoRI GAATTC 1 cut(s) 2628
EcoRII CCWGG 4 cut(s) 700, 937, 2253, 2569
EcoRV GATATC 1 cut(s) 2236
EcoT14I CCWWGG 3 cut(s) 422, 1925, 2953
EcoT38I GRGCYC 2 cut(s) 2356, 3047
ErhI CCWWGG 3 cut(s) 422, 1925, 2953
FalI AAGNNNNNCTT 6 cut(s) 140, 172, 1093, 1125, 2175, 2207
FaqI GGGAC 3 cut(s) 455, 1508, 2533
Fnu4HI GCNGC 3 cut(s) 682, 919, 2447
FriOI GRGCYC 2 cut(s) 2356, 3047
Fsp4HI GCNGC 3 cut(s) 682, 919, 2447
GluI GCNGC 3 cut(s) 682, 919, 2447
GsaI CCCAGC 1 cut(s) 803
GsuI CTGGAG 1 cut(s) 1896
HaeIII GGCC 5 cut(s) 80, 582, 684, 921, 1821
HapII CCGG 2 cut(s) 2441, 2748
HgaI GACGC 1 cut(s) 347
HindIII AAGCTT 1 cut(s) 154
HpaII CCGG 2 cut(s) 2441, 2748
HphI GGTGA 7 cut(s) 658, 1402, 1621, 2040, 2339, 2737, 2834
Hpy166II GTNNAC 1 cut(s) 1065
Hpy188I TCNGA 9 cut(s) 363, 478, 1150, 1285, 1357, 1672, 1863, 2412, 3028
Hpy8I GTNNAC 1 cut(s) 1065
HpyCH4III ACNGT 7 cut(s) 31, 862, 1167, 1594, 1702, 1983, 2249
HpyCH4IV ACGT 1 cut(s) 1460
HpyF10VI GCNNNNNNNGC 5 cut(s) 231, 318, 690, 927, 2285
HpySE526I ACGT 1 cut(s) 1460
KpnI GGTACC 1 cut(s) 866
LmnI GCTCC 1 cut(s) 326
Lsp1109I GCAGC 1 cut(s) 2433
LweI GCATC 1 cut(s) 2763
MaeII ACGT 1 cut(s) 1460
MaeIII GTNAC 5 cut(s) 1047, 1167, 1983, 2240, 2271
MfeI CAATTG 1 cut(s) 54
MhlI GDGCHC 3 cut(s) 2356, 3005, 3047
MlsI TGGCCA 1 cut(s) 80
MluNI TGGCCA 1 cut(s) 80
MlyI GAGTC 1 cut(s) 3032
MmeI TCCRAC 1 cut(s) 348
Mox20I TGGCCA 1 cut(s) 80
MroXI GAANNNNTTC 1 cut(s) 1104
MscI TGGCCA 1 cut(s) 80
MslI CAYNNNNRTG 3 cut(s) 16, 120, 1512
Msp20I TGGCCA 1 cut(s) 80
MspI CCGG 2 cut(s) 2441, 2748
MspR9I CCNGG 5 cut(s) 702, 939, 2255, 2441, 2571
MunI CAATTG 1 cut(s) 54
MvaI CCWGG 4 cut(s) 702, 939, 2255, 2571
MwoI GCNNNNNNNGC 5 cut(s) 231, 318, 690, 927, 2285
NciI CCSGG 1 cut(s) 2441
NcoI CCATGG 1 cut(s) 1925
NlaIV GGNNCC 1 cut(s) 864
NmuCI GTSAC 4 cut(s) 1047, 1167, 2240, 2271
NspI RCATGY 1 cut(s) 1966
NspV TTCGAA 1 cut(s) 539
PagI TCATGA 2 cut(s) 1969, 2536
PciI ACATGT 1 cut(s) 1962
PdmI GAANNNNTTC 1 cut(s) 1104
PflMI CCANNNNNTGG 1 cut(s) 73
PinAI ACCGGT 1 cut(s) 2747
PkrI GCNGC 3 cut(s) 683, 920, 2448
PleI GAGTC 1 cut(s) 3032
PpsI GAGTC 1 cut(s) 3032
PpuMI RGGWCCY 1 cut(s) 2894
PscI ACATGT 1 cut(s) 1962
PshBI ATTAAT 1 cut(s) 609
PsiI TTATAA 1 cut(s) 1500
Psp1406I AACGTT 1 cut(s) 1460
Psp5II RGGWCCY 1 cut(s) 2894
Psp6I CCWGG 4 cut(s) 700, 937, 2253, 2569
PspFI CCCAGC 1 cut(s) 799
PspGI CCWGG 4 cut(s) 700, 937, 2253, 2569
PspN4I GGNNCC 1 cut(s) 864
PspPI GGNCC 8 cut(s) 1154, 1201, 1276, 1348, 1420, 2383, 2797, 2894
PspPPI RGGWCCY 1 cut(s) 2894
PstNI CAGNNNCTG 3 cut(s) 361, 2839, 2897
RseI CAYNNNNRTG 3 cut(s) 16, 120, 1512
SatI GCNGC 3 cut(s) 682, 919, 2447
Sau96I GGNCC 8 cut(s) 1154, 1201, 1276, 1348, 1420, 2383, 2797, 2894
ScaI AGTACT 2 cut(s) 2009, 3171
SchI GAGTC 1 cut(s) 3032
ScrFI CCNGG 5 cut(s) 702, 939, 2255, 2441, 2571
SduI GDGCHC 3 cut(s) 2356, 3005, 3047
SfaNI GCATC 1 cut(s) 2763
SfcI CTRYAG 2 cut(s) 1021, 1236
SfuI TTCGAA 1 cut(s) 539
SinI GGWCC 8 cut(s) 1154, 1201, 1276, 1348, 1420, 2383, 2797, 2894
SmiMI CAYNNNNRTG 3 cut(s) 16, 120, 1512
SmlI CTYRAG 3 cut(s) 1773, 2659, 2767
SmoI CTYRAG 3 cut(s) 1773, 2659, 2767
SsiI CCGC 3 cut(s) 681, 918, 2964
SspI AATATT 1 cut(s) 1144
StyD4I CCNGG 5 cut(s) 700, 937, 2253, 2439, 2569
StyI CCWWGG 3 cut(s) 422, 1925, 2953
TaaI ACNGT 7 cut(s) 31, 862, 1167, 1594, 1702, 1983, 2249
TaiI ACGT 1 cut(s) 1463
TaqI TCGA 5 cut(s) 510, 539, 1375, 1902, 2632
TatI WGTACW 3 cut(s) 1702, 2007, 3169
TauI GCSGC 2 cut(s) 684, 921
TscAI CASTG 3 cut(s) 1119, 1170, 2146
TseFI GTSAC 4 cut(s) 1047, 1167, 2240, 2271
TseI GCWGC 1 cut(s) 2446
Tsp45I GTSAC 4 cut(s) 1047, 1167, 2240, 2271
TspRI CASTG 3 cut(s) 1119, 1170, 2146
Van91I CCANNNNNTGG 1 cut(s) 73
VpaK11BI GGWCC 8 cut(s) 1154, 1201, 1276, 1348, 1420, 2383, 2797, 2894
VspI ATTAAT 1 cut(s) 609
XbaI TCTAGA 3 cut(s) 1567, 1636, 1676
XceI RCATGY 1 cut(s) 1966
XcmI CCANNNNNNNNNTGG 2 cut(s) 1654, 1836
XmnI GAANNNNTTC 1 cut(s) 1104
ZrmI AGTACT 2 cut(s) 2009, 3171
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.