Rroxscaffold_4G00306420

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000024
Physical Location & Seq
Reverse (-)
27286719 .. 27289170
2452 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00306420.1

Sequence Viewer

Length: 2025 bp
ATGCTCACCCAACTCGACCTCTCTTCCTCCGTCTTTGCTGGTCAAGTCCCATCTCCACTCTCACAGTTGGTTAAGTTGTCACTCCTCAATCTTTCTTCCAATAAACCTTCTTCTAGTGTAGGATTGTTGAAACTTGATGGATCCAATTTCAGAAATCTAGTTGAAAACTTAACCAGTCTAGAACATCTTCGTCTCCGTCACATCAACATATCTTCGACAATACCTCATTCCATGGCCAATTTATCATTTTTGACAACCCTCGACTTACATCAGTGTGAGTTGTTTGGAGACTTCCCCGTAACAATTTTCCACTTCCAGAACTTGAAAAATATTTATCTGAGAGACAACCGAGATCTCATTGGTTATTTGCCTAAATTTAATCAAAGTAGTCGTCTCACAACACTAGATGTTCGTGGAACTAGATTTTCAGGGAACTTTCCTTCTTCCATCGGAAAGATTAATTCTTTGAAGCAGTTGGATGTGGCTGAATGCAATTTTTCAGAAGGGTTGATTCCATCTTCTCTAGGTAATCTTAGACAGCTCACATATCTATCCATTTCAGACAACAAATTTGGAGGTCCAATTCCTGATTCTTTTTCAAACCTTACAAAATTGACTACTTTTAGGATTGGTACAAGTCCAACTACTGGTCCGGTCCCATCTTGGATAGGCTTTGAGCAACTTCCAGTTGTGCTTCCTTGGATTAACTTACAATTTTTAAGTCTTTCGTCCAACTTATTCTATGGGCCACTCCCAATACCGGCAGCATCTACTAGTTACTATGAAGTTCGGGATAACAACTTTGCTGGAGAAGTTCCACCAGGGATCTGCAATATGAGTTCTCTTCTGGTTCTTGATGCGTCTAATAACAACTTCAGTGGCATGATTCCGCAGTGTTTCGGAAACTTTAGTGACCATCTGATACTTCTGCTGCTTGGAAATAACTCATTTCATGGCACTCTTCCTCAAACATACACCAACAAAAGCAACTTGAGGAAACTTGATGCGAGTCAAAATCAATTGCAAGGGCAACTACCGACGTCATTGGCTAATTGTCTGATGCTTGAGATTTTGATTCTGTCAAACAATAACTTGAGTGATGTTTTCCCCTTTTGGTTGGCAACTCTTCCCGAGTTGAAACTTTTGGCAATGCGGCATAATGGGTTCCATGGAGTGATAGGAAAGCCTGAAAACAATCAACGGTTCCCGAAGTTGCGTATTCTAGATATGTCTTATAACAATTTCACCGGCCAGTTTCTAGCTGAGCACATCTTCTTTGAGTATGCCATGAGACCAAATGTGACTGTCAGCCAGACAACATACATGGGGGCTGACATCAGATACGAAACTGCTCATGGTGAATTCATTTTCCATTTTGGTGCCACGATTACAATAACGAGTAAAGGTCTGGACAGGTACTATTCAGAGATTCAAGAAGCCTTTGCAGTCATTGATATCTCATGCAACAAATTTGAAGGGAAGATTGATGAATGGATTGGGAATCTAAAAGGGCTTCACTTGCTGAATGTTTCCAATAACCTTCTCACCGGTGGGATCCCATCATCTTTGGGAAATTTAACAGATCTCGAATCACTGGACCTTTCGAATAACAAGCTCTCAGGAGAGATCCCCCAACAAGTAGCGCAACTGACATTCCTTGCACAATTCAATGTCTCTCACAACTATCTCACAGGTCCTATACCGAGTGGAACCCAACTCAGGGGGTTTGATGTCACTGCTTATGAGGGAAACTCCGCACTGTGTGGAGATCCATTGCCAAAGAAATGTGGGAGCTCTAATACCCCAGCTCAACTGCCACCTTCTGGAACAGAAGACAACAGTTCAGGGTCCGGAATTGAATTTGATTGGAAATTTGTGTTATCGGGTTTTGGAAGTGGGTTGGTGGTGGGAGTGGTACTTGCGGATGTGGCAGTCACACAGAGGCCTGAGTTGTTTCTTGAGATGGTTGGAAGATTGATCGGACTAATTGAATTTATGACAAGTTGCAAGAGGTTTGGACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

674

Amino Acids

74.16

Weight (kDa)

5.98

Isoelectric Point (pI)

36.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 19 - 225 7.7e-15 Leucine-rich repeat region
LRR_8 PF13855 355 - 415 9.5e-06 Leucine rich repeat
LRR_8 PF13855 483 - 539 4.9e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1236
AatII GACGTC 1 cut(s) 1043
AccB1I GGYRCC 1 cut(s) 1379
AccB7I CCANNNNNTGG 2 cut(s) 647, 1823
AccIII TCCGGA 1 cut(s) 1850
AciI CCGC 4 cut(s) 890, 1153, 1755, 1922
AclWI GGATC 7 cut(s) 135, 148, 833, 1549, 1562, 1621, 1763
AcoI YGGCCR 2 cut(s) 234, 1249
AcsI RAATTY 8 cut(s) 374, 569, 1361, 1469, 1573, 1859, 1871, 1991
AcuI CTGAAG 1 cut(s) 859
AcyI GRCGYC 1 cut(s) 1040
AdeI CACNNNGTG 1 cut(s) 1763
AfaI GTAC 3 cut(s) 634, 1418, 1917
AfiI CCNNNNNNNGG 5 cut(s) 647, 760, 1719, 1720, 1823
AgeI ACCGGT 1 cut(s) 1547
AhlI ACTAGT 1 cut(s) 773
AjnI CCWGG 1 cut(s) 820
AjuI GAANNNNNNNTTGG 2 cut(s) 574, 606
AluBI AGCT 5 cut(s) 541, 1262, 1615, 1794, 1808
AluI AGCT 5 cut(s) 541, 1262, 1615, 1794, 1808
Alw21I GWGCWC 2 cut(s) 1269, 1796
Alw26I GTCTC 6 cut(s) 197, 282, 336, 398, 1285, 1678
AlwI GGATC 7 cut(s) 135, 148, 833, 1549, 1562, 1621, 1763
Ama87I CYCGRG 1 cut(s) 1130
Aor13HI TCCGGA 1 cut(s) 1850
AoxI GGCC 4 cut(s) 234, 746, 1249, 1943
ApeKI GCWGC 2 cut(s) 764, 931
ApoI RAATTY 8 cut(s) 374, 569, 1361, 1469, 1573, 1859, 1871, 1991
ArsI GACNNNNNNTTYG 4 cut(s) 376, 408, 554, 586
AseI ATTAAT 1 cut(s) 459
AsiGI ACCGGT 1 cut(s) 1547
Asp700I GAANNNNTTC 1 cut(s) 186
AspLEI GCGC 1 cut(s) 1645
AspS9I GGNCC 7 cut(s) 578, 650, 655, 746, 1597, 1694, 1848
AsuHPI GGTGA 3 cut(s) 1237, 1370, 1537
AsuII TTCGAA 1 cut(s) 1604
AvaI CYCGRG 1 cut(s) 1130
AvaII GGWCC 6 cut(s) 578, 650, 655, 1597, 1694, 1848
BalI TGGCCA 1 cut(s) 236
BamHI GGATCC 2 cut(s) 140, 1554
BanI GGYRCC 1 cut(s) 1379
BanII GRGCYC 1 cut(s) 1796
BbsI GAAGAC 1 cut(s) 1839
Bbv12I GWGCWC 2 cut(s) 1269, 1796
BbvI GCAGC 2 cut(s) 776, 918
BccI CCATC 8 cut(s) 58, 131, 455, 523, 667, 924, 1567, 1957
BciT130I CCWGG 1 cut(s) 822
BcoDI GTCTC 6 cut(s) 197, 282, 336, 398, 1285, 1678
BcuI ACTAGT 1 cut(s) 773
BfaI CTAG 9 cut(s) 114, 158, 179, 404, 420, 524, 774, 1223, 1259
BglII AGATCT 2 cut(s) 352, 1582
BisI GCNGC 3 cut(s) 765, 932, 1154
BlpI GCTNAGC 1 cut(s) 1263
BlsI GCNGC 3 cut(s) 766, 933, 1155
Bme1390I CCNGG 1 cut(s) 822
Bme18I GGWCC 6 cut(s) 578, 650, 655, 1597, 1694, 1848
BmeT110I CYCGRG 1 cut(s) 1130
BmgT120I GGNCC 7 cut(s) 578, 650, 655, 746, 1597, 1694, 1848
BmiI GGNNCC 8 cut(s) 142, 657, 1166, 1205, 1381, 1556, 1711, 1849
BmrFI CCNGG 1 cut(s) 822
BmsI GCATC 4 cut(s) 776, 847, 994, 1050
BpiI GAAGAC 1 cut(s) 1839
BplI GAGNNNNNCTC 2 cut(s) 1736, 1768
BpmI CTGGAG 1 cut(s) 828
Bpu1102I GCTNAGC 1 cut(s) 1263
Bpu14I TTCGAA 1 cut(s) 1604
BpuEI CTTGAG 4 cut(s) 1012, 1085, 1114, 1979
BsaHI GRCGYC 1 cut(s) 1040
BsaI GGTCTC 1 cut(s) 1285
BsaJI CCNNGG 4 cut(s) 231, 698, 821, 1168
BsaWI WCCGGW 3 cut(s) 652, 1547, 1850
Bsc4I CCNNNNNNNGG 5 cut(s) 647, 760, 1719, 1720, 1823
Bse118I RCCGGY 3 cut(s) 760, 1247, 1547
Bse1I ACTGG 5 cut(s) 174, 652, 686, 1252, 1599
Bse3DI GCAATG 2 cut(s) 1155, 1772
BseAI TCCGGA 1 cut(s) 1850
BseBI CCWGG 1 cut(s) 822
BseDI CCNNGG 4 cut(s) 231, 698, 821, 1168
BseGI GGATG 2 cut(s) 484, 1930
BseLI CCNNNNNNNGG 5 cut(s) 647, 760, 1719, 1720, 1823
BseMI GCAATG 2 cut(s) 1155, 1772
BseMII CTCAG 5 cut(s) 329, 1254, 1632, 1732, 1938
BseNI ACTGG 5 cut(s) 174, 652, 686, 1252, 1599
BseRI GAGGAG 1 cut(s) 74
BseXI GCAGC 2 cut(s) 776, 918
BseYI CCCAGC 1 cut(s) 1804
BshFI GGCC 4 cut(s) 236, 748, 1251, 1945
BshNI GGYRCC 1 cut(s) 1379
BshTI ACCGGT 1 cut(s) 1547
BsiHKAI GWGCWC 2 cut(s) 1269, 1796
BsiHKCI CYCGRG 1 cut(s) 1130
BsiSI CCGG 5 cut(s) 653, 761, 1248, 1548, 1851
BslFI GGGAC 2 cut(s) 32, 641
BslI CCNNNNNNNGG 5 cut(s) 647, 760, 1719, 1720, 1823
BsmAI GTCTC 6 cut(s) 197, 282, 336, 398, 1285, 1678
BsmBI CGTCTC 2 cut(s) 197, 398
BsmFI GGGAC 2 cut(s) 32, 641
BsmI GAATGC 1 cut(s) 494
BsnI GGCC 4 cut(s) 236, 748, 1251, 1945
Bso31I GGTCTC 1 cut(s) 1285
BsoBI CYCGRG 1 cut(s) 1130
Bsp119I TTCGAA 1 cut(s) 1604
Bsp1286I GDGCHC 2 cut(s) 1269, 1796
Bsp13I TCCGGA 1 cut(s) 1850
Bsp143I GATC 8 cut(s) 140, 352, 825, 1554, 1582, 1626, 1768, 1977
Bsp1720I GCTNAGC 1 cut(s) 1263
Bsp19I CCATGG 2 cut(s) 231, 1168
BspACI CCGC 4 cut(s) 890, 1153, 1755, 1922
BspANI GGCC 4 cut(s) 236, 748, 1251, 1945
BspCNI CTCAG 5 cut(s) 330, 1255, 1631, 1731, 1939
BspEI TCCGGA 1 cut(s) 1850
BspLI GGNNCC 8 cut(s) 142, 657, 1166, 1205, 1381, 1556, 1711, 1849
BspPI GGATC 7 cut(s) 135, 148, 833, 1549, 1562, 1621, 1763
BspT104I TTCGAA 1 cut(s) 1604
BspT107I GGYRCC 1 cut(s) 1379
BspTNI GGTCTC 1 cut(s) 1285
BsrDI GCAATG 2 cut(s) 1155, 1772
BsrFI RCCGGY 3 cut(s) 760, 1247, 1547
BsrI ACTGG 5 cut(s) 174, 652, 686, 1252, 1599
BssAI RCCGGY 3 cut(s) 760, 1247, 1547
BssECI CCNNGG 4 cut(s) 231, 698, 821, 1168
BssMI GATC 8 cut(s) 140, 352, 825, 1554, 1582, 1626, 1768, 1977
BssNI GRCGYC 1 cut(s) 1040
BssT1I CCWWGG 3 cut(s) 231, 698, 1168
Bst2UI CCWGG 1 cut(s) 822
Bst4CI ACNGT 5 cut(s) 66, 1203, 1306, 1761, 1841
Bst6I CTCTTC 4 cut(s) 28, 849, 966, 1131
BstACI GRCGYC 1 cut(s) 1040
BstBI TTCGAA 1 cut(s) 1604
BstDEI CTNAG 6 cut(s) 338, 533, 1263, 1618, 1718, 1947
BstDSI CCRYGG 2 cut(s) 231, 1168
BstF5I GGATG 2 cut(s) 484, 1930
BstHHI GCGC 1 cut(s) 1645
BstKTI GATC 8 cut(s) 143, 355, 828, 1557, 1585, 1629, 1771, 1980
BstMAI GTCTC 6 cut(s) 197, 282, 336, 398, 1285, 1678
BstMBI GATC 8 cut(s) 140, 352, 825, 1554, 1582, 1626, 1768, 1977
BstMWI GCNNNNNNNGC 2 cut(s) 1519, 1928
BstNI CCWGG 1 cut(s) 822
BstSCI CCNGG 1 cut(s) 820
BstV1I GCAGC 2 cut(s) 776, 918
BstV2I GAAGAC 1 cut(s) 1839
BstX2I RGATCY 7 cut(s) 140, 352, 825, 1554, 1582, 1626, 1768
BstYI RGATCY 7 cut(s) 140, 352, 825, 1554, 1582, 1626, 1768
BsuRI GGCC 4 cut(s) 236, 748, 1251, 1945
BtgI CCRYGG 2 cut(s) 231, 1168
BtsCI GGATG 2 cut(s) 484, 1930
BtsI GCAGTG 2 cut(s) 899, 1734
BtsIMutI CAGTG 6 cut(s) 278, 883, 899, 1592, 1734, 1757
CfoI GCGC 1 cut(s) 1645
Cfr10I RCCGGY 3 cut(s) 760, 1247, 1547
Cfr13I GGNCC 7 cut(s) 578, 650, 655, 746, 1597, 1694, 1848
CseI GACGC 1 cut(s) 849
Csp6I GTAC 3 cut(s) 633, 1417, 1916
CspAI ACCGGT 1 cut(s) 1547
CspCI CAANNNNNGTGG 2 cut(s) 859, 894
CviAII CATG 8 cut(s) 232, 883, 953, 1169, 1288, 1324, 1355, 1461
CviQI GTAC 3 cut(s) 633, 1417, 1916
DdeI CTNAG 6 cut(s) 338, 533, 1263, 1618, 1718, 1947
DpnI GATC 8 cut(s) 142, 354, 827, 1556, 1584, 1628, 1770, 1979
DpnII GATC 8 cut(s) 140, 352, 825, 1554, 1582, 1626, 1768, 1977
DraIII CACNNNGTG 1 cut(s) 1763
EaeI YGGCCR 2 cut(s) 234, 1249
Eam1104I CTCTTC 4 cut(s) 28, 849, 966, 1131
EarI CTCTTC 4 cut(s) 28, 849, 966, 1131
Ecl136II GAGCTC 1 cut(s) 1794
Eco130I CCWWGG 3 cut(s) 231, 698, 1168
Eco147I AGGCCT 1 cut(s) 1945
Eco24I GRGCYC 1 cut(s) 1796
Eco31I GGTCTC 1 cut(s) 1285
Eco32I GATATC 1 cut(s) 1456
Eco47I GGWCC 6 cut(s) 578, 650, 655, 1597, 1694, 1848
Eco53kI GAGCTC 1 cut(s) 1794
Eco57I CTGAAG 1 cut(s) 859
Eco88I CYCGRG 1 cut(s) 1130
EcoICRI GAGCTC 1 cut(s) 1794
EcoO109I RGGNCCY 1 cut(s) 1694
EcoRI GAATTC 1 cut(s) 1361
EcoRII CCWGG 1 cut(s) 820
EcoRV GATATC 1 cut(s) 1456
EcoT14I CCWWGG 3 cut(s) 231, 698, 1168
EcoT38I GRGCYC 1 cut(s) 1796
ErhI CCWWGG 3 cut(s) 231, 698, 1168
Esp3I CGTCTC 2 cut(s) 197, 398
FaeI CATG 8 cut(s) 235, 886, 956, 1172, 1291, 1327, 1358, 1464
FaqI GGGAC 2 cut(s) 32, 641
FatI CATG 8 cut(s) 231, 882, 952, 1168, 1287, 1323, 1354, 1460
Fnu4HI GCNGC 3 cut(s) 765, 932, 1154
FokI GGATG 2 cut(s) 491, 1937
FriOI GRGCYC 1 cut(s) 1796
Fsp4HI GCNGC 3 cut(s) 765, 932, 1154
FspBI CTAG 9 cut(s) 114, 158, 179, 404, 420, 524, 774, 1223, 1259
GlaI GCGC 1 cut(s) 1644
GluI GCNGC 3 cut(s) 765, 932, 1154
GsaI CCCAGC 1 cut(s) 1808
GsuI CTGGAG 1 cut(s) 828
HaeIII GGCC 4 cut(s) 236, 748, 1251, 1945
HapII CCGG 5 cut(s) 653, 761, 1248, 1548, 1851
HgaI GACGC 1 cut(s) 849
HhaI GCGC 1 cut(s) 1645
Hin1I GRCGYC 1 cut(s) 1040
Hin1II CATG 8 cut(s) 235, 886, 956, 1172, 1291, 1327, 1358, 1464
Hin6I GCGC 1 cut(s) 1643
HinP1I GCGC 1 cut(s) 1643
HinfI GANTC 8 cut(s) 511, 590, 886, 1009, 1075, 1429, 1501, 1589
HpaII CCGG 5 cut(s) 653, 761, 1248, 1548, 1851
HphI GGTGA 3 cut(s) 1237, 1370, 1537
Hpy99I CGWCG 1 cut(s) 1042
HpyAV CCTTC 6 cut(s) 117, 450, 497, 1469, 1550, 1830
HpyCH4III ACNGT 5 cut(s) 66, 1203, 1306, 1761, 1841
HpyCH4IV ACGT 1 cut(s) 1040
HpyCH4V TGCA 7 cut(s) 492, 831, 1024, 1445, 1464, 1661, 2007
HpyF10VI GCNNNNNNNGC 2 cut(s) 1519, 1928
HpyF3I CTNAG 6 cut(s) 338, 533, 1263, 1618, 1718, 1947
HpySE526I ACGT 1 cut(s) 1040
Hsp92I GRCGYC 1 cut(s) 1040
Hsp92II CATG 8 cut(s) 235, 886, 956, 1172, 1291, 1327, 1358, 1464
HspAI GCGC 1 cut(s) 1643
Kpn2I TCCGGA 1 cut(s) 1850
Kzo9I GATC 8 cut(s) 140, 352, 825, 1554, 1582, 1626, 1768, 1977
LmnI GCTCC 1 cut(s) 1791
Lsp1109I GCAGC 2 cut(s) 776, 918
LweI GCATC 4 cut(s) 776, 847, 994, 1050
MaeI CTAG 9 cut(s) 114, 158, 179, 404, 420, 524, 774, 1223, 1259
MaeII ACGT 1 cut(s) 1040
MaeIII GTNAC 8 cut(s) 78, 197, 298, 776, 911, 1300, 1732, 1933
MalI GATC 8 cut(s) 142, 354, 827, 1556, 1584, 1628, 1770, 1979
MboI GATC 8 cut(s) 140, 352, 825, 1554, 1582, 1626, 1768, 1977
MfeI CAATTG 1 cut(s) 1019
MflI RGATCY 7 cut(s) 140, 352, 825, 1554, 1582, 1626, 1768
MhlI GDGCHC 2 cut(s) 1269, 1796
MlsI TGGCCA 1 cut(s) 236
MluNI TGGCCA 1 cut(s) 236
MlyI GAGTC 1 cut(s) 1018
MmeI TCCRAC 4 cut(s) 456, 665, 756, 1948
Mox20I TGGCCA 1 cut(s) 236
MroI TCCGGA 1 cut(s) 1850
MroXI GAANNNNTTC 1 cut(s) 186
MscI TGGCCA 1 cut(s) 236
MseI TTAA 7 cut(s) 72, 170, 378, 459, 705, 719, 1577
MslI CAYNNNNRTG 2 cut(s) 273, 1377
Msp20I TGGCCA 1 cut(s) 236
MspI CCGG 5 cut(s) 653, 761, 1248, 1548, 1851
MspR9I CCNGG 1 cut(s) 822
MunI CAATTG 1 cut(s) 1019
Mva1269I GAATGC 1 cut(s) 494
MvaI CCWGG 1 cut(s) 822
MwoI GCNNNNNNNGC 2 cut(s) 1519, 1928
NcoI CCATGG 2 cut(s) 231, 1168
NdeII GATC 8 cut(s) 140, 352, 825, 1554, 1582, 1626, 1768, 1977
NlaIII CATG 8 cut(s) 235, 886, 956, 1172, 1291, 1327, 1358, 1464
NlaIV GGNNCC 8 cut(s) 142, 657, 1166, 1205, 1381, 1556, 1711, 1849
NmuCI GTSAC 6 cut(s) 78, 197, 911, 1300, 1732, 1933
NspV TTCGAA 1 cut(s) 1604
PceI AGGCCT 1 cut(s) 1945
PctI GAATGC 1 cut(s) 494
PdmI GAANNNNTTC 1 cut(s) 186
PfeI GAWTC 7 cut(s) 511, 590, 886, 1075, 1429, 1501, 1589
PflMI CCANNNNNTGG 2 cut(s) 647, 1823
PinAI ACCGGT 1 cut(s) 1547
PkrI GCNGC 3 cut(s) 766, 933, 1155
PleI GAGTC 1 cut(s) 1017
PpsI GAGTC 1 cut(s) 1017
PpuMI RGGWCCY 1 cut(s) 1694
PshBI ATTAAT 1 cut(s) 459
PsiI TTATAA 1 cut(s) 1236
Psp124BI GAGCTC 1 cut(s) 1796
Psp5II RGGWCCY 1 cut(s) 1694
Psp6I CCWGG 1 cut(s) 820
PspFI CCCAGC 1 cut(s) 1804
PspGI CCWGG 1 cut(s) 820
PspN4I GGNNCC 8 cut(s) 142, 657, 1166, 1205, 1381, 1556, 1711, 1849
PspPI GGNCC 7 cut(s) 578, 650, 655, 746, 1597, 1694, 1848
PspPPI RGGWCCY 1 cut(s) 1694
PsuI RGATCY 7 cut(s) 140, 352, 825, 1554, 1582, 1626, 1768
RsaI GTAC 3 cut(s) 634, 1418, 1917
RsaNI GTAC 3 cut(s) 633, 1417, 1916
RseI CAYNNNNRTG 2 cut(s) 273, 1377
SacI GAGCTC 1 cut(s) 1796
SaqAI TTAA 7 cut(s) 72, 170, 378, 459, 705, 719, 1577
SatI GCNGC 3 cut(s) 765, 932, 1154
Sau3AI GATC 8 cut(s) 140, 352, 825, 1554, 1582, 1626, 1768, 1977
Sau96I GGNCC 7 cut(s) 578, 650, 655, 746, 1597, 1694, 1848
SchI GAGTC 1 cut(s) 1018
ScrFI CCNGG 1 cut(s) 822
SduI GDGCHC 2 cut(s) 1269, 1796
SfaNI GCATC 4 cut(s) 776, 847, 994, 1050
SfuI TTCGAA 1 cut(s) 1604
SgrAI CRCCGGYG 1 cut(s) 1547
SinI GGWCC 6 cut(s) 578, 650, 655, 1597, 1694, 1848
SmiMI CAYNNNNRTG 2 cut(s) 273, 1377
SmlI CTYRAG 4 cut(s) 991, 1064, 1093, 1958
SmoI CTYRAG 4 cut(s) 991, 1064, 1093, 1958
SpeI ACTAGT 1 cut(s) 773
SseBI AGGCCT 1 cut(s) 1945
SsiI CCGC 4 cut(s) 890, 1153, 1755, 1922
SspI AATATT 1 cut(s) 331
SspMI CTAG 9 cut(s) 114, 158, 179, 404, 420, 524, 774, 1223, 1259
SstI GAGCTC 1 cut(s) 1796
StuI AGGCCT 1 cut(s) 1945
StyD4I CCNGG 1 cut(s) 820
StyI CCWWGG 3 cut(s) 231, 698, 1168
TaaI ACNGT 5 cut(s) 66, 1203, 1306, 1761, 1841
TaiI ACGT 1 cut(s) 1043
TaqI TCGA 5 cut(s) 15, 215, 261, 1587, 1604
TauI GCSGC 1 cut(s) 1156
TfiI GAWTC 7 cut(s) 511, 590, 886, 1075, 1429, 1501, 1589
Tru1I TTAA 7 cut(s) 72, 170, 378, 459, 705, 719, 1577
Tru9I TTAA 7 cut(s) 72, 170, 378, 459, 705, 719, 1577
TscAI CASTG 6 cut(s) 278, 883, 899, 1599, 1741, 1764
TseFI GTSAC 6 cut(s) 78, 197, 911, 1300, 1732, 1933
TseI GCWGC 2 cut(s) 764, 931
Tsp45I GTSAC 6 cut(s) 78, 197, 911, 1300, 1732, 1933
TspDTI ATGAA 4 cut(s) 798, 941, 1354, 1503
TspGWI ACGGA 2 cut(s) 19, 185
TspRI CASTG 6 cut(s) 278, 883, 899, 1599, 1741, 1764
Van91I CCANNNNNTGG 2 cut(s) 647, 1823
VpaK11BI GGWCC 6 cut(s) 578, 650, 655, 1597, 1694, 1848
VspI ATTAAT 1 cut(s) 459
XapI RAATTY 8 cut(s) 374, 569, 1361, 1469, 1573, 1859, 1871, 1991
XbaI TCTAGA 2 cut(s) 178, 1222
XmnI GAANNNNTTC 1 cut(s) 186
XspI CTAG 9 cut(s) 114, 158, 179, 404, 420, 524, 774, 1223, 1259
ZraI GACGTC 1 cut(s) 1041
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.