MD07G1107400.v1.1

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0000024
Physical Location & Seq
Reverse (-)
12151078 .. 12153243
2166 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1107400.v1.1.491

Sequence Viewer

Length: 2166 bp
ATGGCTAATTTATCATCTTTGACAACCCTCTACCTCAGGGACTATCACCTGTTTGGTGAATTTCCAGTGAGAATTTTCCAACTGCCAAACCTAGAATCTCTTAGTGTGAGATACAACCAAGATCTGACTGGATATTTTCCTGAATTTAATCAAAGCAGTCCTCTCATCTTACTGAAAGTCGGCTTTACTGGCTTTTTTGGAACAATACCCTCTTCAATTCAAAACCTTCATTCACTGCAAAACTTCGATGTGGCTCAATGCAATTTTTCGGAAGGGTTGGTTCCATCTTTTCTTGGGAATCTTAGGCAGCTCACTTATCTAGACATTTCAGCCAATAAATTTGGAGGTCTAATTCCTGATTCCTTGGCAAACCTTACCCAACTGGCTACTTTTAGGATTAGTACAAGTCGATTAACCGGTCCAATCCCATCTTGGCTAGGCAACTTTAGCAAACTAGAGTACCTAGATTTTGCTTTTAATAGATTAAATGGTTCAGTTCCTGCGTCATTTTCAAATCTCACAAACCTTCAGATCCTGTATCTACATTCGAATACTCTGAGTGGTGCAGTAGAGTTTCAAATGTTTCAAAATCTACAATCTCTTTACCAACTCGAATTAAGCGGGAACGGTTTAGAACTTGTCACTCAATCCAGAATTTTGAATTCAACAGTTAAACAGTTCACTGTTCTTGGATTGAGTAATTGCAACTTAGGAGAGTTTCCATCCTTCTTACAATATCAGAATGGGTTGACGCGTTTGGAAATTGCTGGAAACAAAATCCGAGGCCAAGTACCAAAATGGATGTGGAATACAAGCTTAGAAACTTTGCTATTGTTAGACATTTCCAATAACTTCATTTCAGACCAACCTCCACTTGTCCTTCCTTGGGTGAAACTGTTATGTCTAAGGTTTTCGTCCAACATGTTTCATGGATCACTACCGATACCTCCACCAACCATGCGAGAATATGCAGCTGCAGACAACAACTTTACTGGAGAAATCTCACCGTTGCTTTGCAATATGAAAAATCTTCTGTCCCTTGACTTGTCGAAAAATAACTTGAGTGGCATGCTTCCTCAGTGTCTTGGAAACTTTAGTGATCATCTGACACTTCTACTTCTCGGAAACAACGCTTTTCACGGAATTATTCCTCAGACATACAACAAAGGAAGCAGTTTGAGAATGATTGATGTGAGTCATAACAAGTTGCAGGGGCAGTTGCCGAGGTCATTGGCCAATTGTGTGATGCTTGAGTATCTTGTTTTGTCAAACAATCGTTTCAATGATGTTTTTCCCATTTGGTTGGGGACTCTTCTAGAGTTAAAACTTTTGGCAATGCGCCATAATGGATTCTACGGTGTGATTGGAAAATCTAGAAAGAATGTCGATTTCCCCAAGTTACGCATTCTTGATTTGGCTTACAATGATTTTACTGGAGCGGTTCCATCTGTGTTTCTAGATATTACTGTAAACAAGTCAACATATATGTACACACGTGTAGTTTATGATGTCGATGGATTCCCGGTTTGGAGCAATGTTGATTACCAACTCACAATAGCAACAAAAGGTTTGGAGCAATACTACCCAAAGATCCGAGAAGAATTTGCATCCTTTGATATCTCAAGCAACAAATTTGAAGGGAAAATTCCAGAATTCATTGGGAACCTTAAGGAGCTTCGTTCGCTGAATCTATCCCACAACATTCTCACTGGTTCTATTCCATCATCCTTCGGAAACTTGACGAAGCTTGAATCGTTGGACCTTTCACAAAACATGCTCTCAGGACAGATCCCCCAACAACTGAGTCGACTTACTTTTCTTGCCAATTTCAATGTGTCTCACAACAATCTCACAGGTCTTATACCACAAGGAACCCAACTTACTTCATTGAATATCACTTCATACGAGGGAAACCTAGGGTTGTGTGGAGATCCATTGCCAAAGAAATGTGGAAATCCTAAGGCCCCTCAACTTCCACCTTCAATTGTAGACGAAGGTGATTCTAGCTCAGCAGGAATATTTGAATTTGATTGGAAAATTGTTTCGGCCGGATGTGGAAGTGGGTTTGTAGTGGGAGTAATTCTTGCAGATGTTGTGATTACAAGGAGGCCCGATTTGTTTCTTAAGATTGTTGGAATGATCAGACAAATGATAAGGAAAATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

722

Amino Acids

80.32

Weight (kDa)

7.56

Isoelectric Point (pI)

34.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 72 - 282 2.5e-14 Leucine-rich repeat region
LRR_8 PF13855 127 - 186 8.2e-08 Leucine rich repeat
LRR_8 PF13855 151 - 211 1.4e-07 Leucine rich repeat
LRR_8 PF13855 368 - 427 9.3e-09 Leucine rich repeat
LRR_8 PF13855 538 - 593 4.1e-08 Leucine rich repeat
LRR_14 PF23598 548 - 612 6.8e-06 Leucine-rich repeat region
LRR_8 PF13855 558 - 617 9.6e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1439
AccI GTMKAC 2 cut(s) 1807, 1989
AccII CGCG 1 cut(s) 754
AciI CCGC 2 cut(s) 621, 1439
AclWI GGATC 5 cut(s) 526, 940, 1585, 1783, 1925
AcoI YGGCCR 2 cut(s) 1233, 2046
AcuI CTGAAG 1 cut(s) 512
AcvI CACGTG 1 cut(s) 1496
AfaI GTAC 4 cut(s) 403, 461, 792, 1490
AfiI CCNNNNNNNGG 1 cut(s) 886
AflII CTTAAG 2 cut(s) 1667, 2123
AflIII ACRYGT 4 cut(s) 752, 921, 1493, 1495
AgeI ACCGGT 1 cut(s) 416
AluBI AGCT 6 cut(s) 310, 816, 974, 1675, 1747, 2007
AluI AGCT 6 cut(s) 310, 816, 974, 1675, 1747, 2007
Alw26I GTCTC 1 cut(s) 1842
AlwI GGATC 5 cut(s) 526, 940, 1585, 1783, 1925
AlwNI CAGNNNCTG 2 cut(s) 500, 535
AoxI GGCC 5 cut(s) 784, 1233, 1962, 2046, 2108
ApeKI GCWGC 3 cut(s) 307, 971, 974
AsiGI ACCGGT 1 cut(s) 416
AspA2I CCTAGG 1 cut(s) 1915
AspLEI GCGC 1 cut(s) 1341
AspS9I GGNCC 4 cut(s) 419, 1759, 1963, 2109
AsuC2I CCSGG 1 cut(s) 1523
AsuHPI GGTGA 5 cut(s) 38, 68, 901, 996, 2009
AsuII TTCGAA 1 cut(s) 548
AvaII GGWCC 2 cut(s) 419, 1759
AvrII CCTAGG 1 cut(s) 1915
AxyI CCTNAGG 2 cut(s) 35, 1959
BaeI ACNNNNGTAYC 2 cut(s) 443, 476
BalI TGGCCA 1 cut(s) 1235
BbrPI CACGTG 1 cut(s) 1496
BbvI GCAGC 3 cut(s) 319, 961, 983
BccI CCATC 6 cut(s) 292, 436, 730, 1453, 1508, 1729
BclI TGATCA 2 cut(s) 1099, 2139
BcnI CCSGG 1 cut(s) 1523
BcoDI GTCTC 1 cut(s) 1842
BfmI CTRYAG 1 cut(s) 975
BfrI CTTAAG 2 cut(s) 1667, 2123
BglII AGATCT 1 cut(s) 121
BisI GCNGC 3 cut(s) 308, 972, 975
BlnI CCTAGG 1 cut(s) 1915
BlpI GCTNAGC 1 cut(s) 2008
BlsI GCNGC 3 cut(s) 309, 973, 976
Bme1390I CCNGG 1 cut(s) 1523
Bme18I GGWCC 2 cut(s) 419, 1759
BmgT120I GGNCC 4 cut(s) 419, 1759, 1963, 2109
BmiI GGNNCC 5 cut(s) 282, 1443, 1664, 1873, 1965
BmrFI CCNGG 1 cut(s) 1523
BmsI GCATC 2 cut(s) 1236, 1616
BpmI CTGGAG 2 cut(s) 1014, 1455
Bpu1102I GCTNAGC 1 cut(s) 2008
Bpu14I TTCGAA 1 cut(s) 548
BpuEI CTTGAG 3 cut(s) 1081, 1271, 1606
BpuMI CCSGG 1 cut(s) 1523
BsaAI YACGTR 1 cut(s) 1496
BsaJI CCNNGG 5 cut(s) 363, 781, 884, 1223, 1915
BsaWI WCCGGW 1 cut(s) 416
Bsc4I CCNNNNNNNGG 1 cut(s) 886
Bse118I RCCGGY 1 cut(s) 416
Bse1I ACTGG 7 cut(s) 65, 133, 193, 387, 997, 1438, 1714
Bse21I CCTNAGG 2 cut(s) 35, 1959
Bse3DI GCAATG 3 cut(s) 1341, 1540, 1934
BseDI CCNNGG 5 cut(s) 363, 781, 884, 1223, 1915
BseGI GGATG 5 cut(s) 722, 807, 1607, 1724, 2057
BseLI CCNNNNNNNGG 1 cut(s) 886
BseMI GCAATG 3 cut(s) 1341, 1540, 1934
BseMII CTCAG 7 cut(s) 49, 548, 1091, 1166, 1793, 1794, 2022
BseNI ACTGG 7 cut(s) 65, 133, 193, 387, 997, 1438, 1714
BseX3I CGGCCG 1 cut(s) 2046
BseXI GCAGC 3 cut(s) 319, 961, 983
BsgI GTGCAG 1 cut(s) 585
Bsh1236I CGCG 1 cut(s) 754
Bsh1285I CGRYCG 1 cut(s) 2049
BshFI GGCC 5 cut(s) 786, 1235, 1964, 2048, 2110
BshTI ACCGGT 1 cut(s) 416
BsiEI CGRYCG 1 cut(s) 2049
BsiSI CCGG 3 cut(s) 417, 1523, 2049
BslFI GGGAC 3 cut(s) 53, 1021, 1321
BslI CCNNNNNNNGG 1 cut(s) 886
BsmAI GTCTC 1 cut(s) 1842
BsmFI GGGAC 3 cut(s) 53, 1021, 1321
BsmI GAATGC 1 cut(s) 1404
BsnI GGCC 5 cut(s) 786, 1235, 1964, 2048, 2110
Bsp119I TTCGAA 1 cut(s) 548
Bsp1407I TGTACA 1 cut(s) 1488
Bsp143I GATC 8 cut(s) 121, 531, 932, 1099, 1590, 1788, 1930, 2139
Bsp1720I GCTNAGC 1 cut(s) 2008
BspACI CCGC 2 cut(s) 621, 1439
BspANI GGCC 5 cut(s) 786, 1235, 1964, 2048, 2110
BspCNI CTCAG 7 cut(s) 48, 549, 1090, 1165, 1793, 1794, 2021
BspFNI CGCG 1 cut(s) 754
BspLI GGNNCC 5 cut(s) 282, 1443, 1664, 1873, 1965
BspMAI CTGCAG 1 cut(s) 979
BspPI GGATC 5 cut(s) 526, 940, 1585, 1783, 1925
BspT104I TTCGAA 1 cut(s) 548
BspTI CTTAAG 2 cut(s) 1667, 2123
BsrBI CCGCTC 1 cut(s) 1439
BsrDI GCAATG 3 cut(s) 1341, 1540, 1934
BsrFI RCCGGY 1 cut(s) 416
BsrGI TGTACA 1 cut(s) 1488
BsrI ACTGG 7 cut(s) 65, 133, 193, 387, 997, 1438, 1714
BssAI RCCGGY 1 cut(s) 416
BssECI CCNNGG 5 cut(s) 363, 781, 884, 1223, 1915
BssMI GATC 8 cut(s) 121, 531, 932, 1099, 1590, 1788, 1930, 2139
BssT1I CCWWGG 3 cut(s) 363, 884, 1915
Bst4CI ACNGT 8 cut(s) 629, 670, 678, 685, 897, 1008, 1358, 1468
Bst6I CTCTTC 2 cut(s) 217, 1317
BstAFI CTTAAG 2 cut(s) 1667, 2123
BstAUI TGTACA 1 cut(s) 1488
BstBAI YACGTR 1 cut(s) 1496
BstBI TTCGAA 1 cut(s) 548
BstC8I GCNNGC 1 cut(s) 1070
BstF5I GGATG 5 cut(s) 722, 807, 1607, 1724, 2057
BstFNI CGCG 1 cut(s) 754
BstHHI GCGC 1 cut(s) 1341
BstKTI GATC 8 cut(s) 124, 534, 935, 1102, 1593, 1791, 1933, 2142
BstMAI GTCTC 1 cut(s) 1842
BstMBI GATC 8 cut(s) 121, 531, 932, 1099, 1590, 1788, 1930, 2139
BstMCI CGRYCG 1 cut(s) 2049
BstMWI GCNNNNNNNGC 3 cut(s) 189, 447, 1681
BstNSI RCATGY 3 cut(s) 925, 1072, 1777
BstSCI CCNGG 1 cut(s) 1521
BstSFI CTRYAG 1 cut(s) 975
BstUI CGCG 1 cut(s) 754
BstV1I GCAGC 3 cut(s) 319, 961, 983
BstX2I RGATCY 5 cut(s) 121, 531, 1590, 1788, 1930
BstXI CCANNNNNNTGG 1 cut(s) 1303
BstYI RGATCY 5 cut(s) 121, 531, 1590, 1788, 1930
BstZI CGGCCG 1 cut(s) 2046
Bsu36I CCTNAGG 2 cut(s) 35, 1959
BsuRI GGCC 5 cut(s) 786, 1235, 1964, 2048, 2110
BtsCI GGATG 5 cut(s) 722, 807, 1607, 1724, 2057
BtsI GCAGTG 1 cut(s) 233
BtsIMutI CAGTG 5 cut(s) 72, 233, 681, 1085, 1707
Cac8I GCNNGC 1 cut(s) 1070
CaiI CAGNNNCTG 2 cut(s) 500, 535
CfoI GCGC 1 cut(s) 1341
Cfr10I RCCGGY 1 cut(s) 416
Cfr13I GGNCC 4 cut(s) 419, 1759, 1963, 2109
CseI GACGC 2 cut(s) 492, 760
Csp6I GTAC 4 cut(s) 402, 460, 791, 1489
CspAI ACCGGT 1 cut(s) 416
CviAII CATG 5 cut(s) 922, 929, 958, 1069, 1774
CviQI GTAC 4 cut(s) 402, 460, 791, 1489
DpnI GATC 8 cut(s) 123, 533, 934, 1101, 1592, 1790, 1932, 2141
DpnII GATC 8 cut(s) 121, 531, 932, 1099, 1590, 1788, 1930, 2139
EaeI YGGCCR 2 cut(s) 1233, 2046
EagI CGGCCG 1 cut(s) 2046
Eam1104I CTCTTC 2 cut(s) 217, 1317
EarI CTCTTC 2 cut(s) 217, 1317
EclXI CGGCCG 1 cut(s) 2046
Eco130I CCWWGG 3 cut(s) 363, 884, 1915
Eco32I GATATC 1 cut(s) 1618
Eco47I GGWCC 2 cut(s) 419, 1759
Eco52I CGGCCG 1 cut(s) 2046
Eco57I CTGAAG 1 cut(s) 512
Eco72I CACGTG 1 cut(s) 1496
Eco81I CCTNAGG 2 cut(s) 35, 1959
EcoO109I RGGNCCY 1 cut(s) 1963
EcoRI GAATTC 2 cut(s) 661, 1652
EcoRV GATATC 1 cut(s) 1618
EcoT14I CCWWGG 3 cut(s) 363, 884, 1915
ErhI CCWWGG 3 cut(s) 363, 884, 1915
FaeI CATG 5 cut(s) 925, 932, 961, 1072, 1777
FaqI GGGAC 3 cut(s) 53, 1021, 1321
FatI CATG 5 cut(s) 921, 928, 957, 1068, 1773
FauI CCCGC 1 cut(s) 614
FbaI TGATCA 2 cut(s) 1099, 2139
FblI GTMKAC 2 cut(s) 1807, 1989
Fnu4HI GCNGC 3 cut(s) 308, 972, 975
FokI GGATG 5 cut(s) 709, 814, 1594, 1711, 2064
Fsp4HI GCNGC 3 cut(s) 308, 972, 975
GlaI GCGC 1 cut(s) 1340
GluI GCNGC 3 cut(s) 308, 972, 975
GsuI CTGGAG 2 cut(s) 1014, 1455
HaeIII GGCC 5 cut(s) 786, 1235, 1964, 2048, 2110
HapII CCGG 3 cut(s) 417, 1523, 2049
HgaI GACGC 2 cut(s) 492, 760
HhaI GCGC 1 cut(s) 1341
Hin1II CATG 5 cut(s) 925, 932, 961, 1072, 1777
Hin6I GCGC 1 cut(s) 1339
HinP1I GCGC 1 cut(s) 1339
HincII GTYRAC 3 cut(s) 750, 1479, 1808
HindII GTYRAC 3 cut(s) 750, 1479, 1808
HindIII AAGCTT 2 cut(s) 814, 1745
HpaII CCGG 3 cut(s) 417, 1523, 2049
HphI GGTGA 5 cut(s) 38, 68, 901, 996, 2009
Hpy166II GTNNAC 7 cut(s) 681, 750, 1471, 1479, 1491, 1808, 1990
Hpy8I GTNNAC 7 cut(s) 681, 750, 1471, 1479, 1491, 1808, 1990
HpyAV CCTTC 9 cut(s) 236, 266, 536, 736, 890, 1631, 1738, 1988, 1989
HpyCH4III ACNGT 8 cut(s) 629, 670, 678, 685, 897, 1008, 1358, 1468
HpyCH4IV ACGT 1 cut(s) 1495
HpyF10VI GCNNNNNNNGC 3 cut(s) 189, 447, 1681
HpySE526I ACGT 1 cut(s) 1495
Hsp92II CATG 5 cut(s) 925, 932, 961, 1072, 1777
HspAI GCGC 1 cut(s) 1339
Ksp22I TGATCA 2 cut(s) 1099, 2139
Kzo9I GATC 8 cut(s) 121, 531, 932, 1099, 1590, 1788, 1930, 2139
LmnI GCTCC 4 cut(s) 1436, 1530, 1573, 1672
Lsp1109I GCAGC 3 cut(s) 319, 961, 983
LweI GCATC 2 cut(s) 1236, 1616
MaeII ACGT 1 cut(s) 1495
MaeIII GTNAC 2 cut(s) 640, 1398
MalI GATC 8 cut(s) 123, 533, 934, 1101, 1592, 1790, 1932, 2141
MbiI CCGCTC 1 cut(s) 1439
MboI GATC 8 cut(s) 121, 531, 932, 1099, 1590, 1788, 1930, 2139
MboII GAAGA 4 cut(s) 204, 1022, 1304, 1610
MfeI CAATTG 2 cut(s) 1237, 1983
MflI RGATCY 5 cut(s) 121, 531, 1590, 1788, 1930
MlsI TGGCCA 1 cut(s) 1235
MluI ACGCGT 1 cut(s) 752
MluNI TGGCCA 1 cut(s) 1235
MlyI GAGTC 3 cut(s) 1204, 1303, 1813
MmeI TCCRAC 4 cut(s) 103, 942, 1737, 2113
Mox20I TGGCCA 1 cut(s) 1235
MscI TGGCCA 1 cut(s) 1235
MseI TTAA 9 cut(s) 147, 413, 477, 485, 617, 672, 1322, 1668, 2124
Msp20I TGGCCA 1 cut(s) 1235
MspA1I CMGCKG 1 cut(s) 974
MspCI CTTAAG 2 cut(s) 1667, 2123
MspI CCGG 3 cut(s) 417, 1523, 2049
MspR9I CCNGG 1 cut(s) 1523
MunI CAATTG 2 cut(s) 1237, 1983
Mva1269I GAATGC 1 cut(s) 1404
MvnI CGCG 1 cut(s) 754
MwoI GCNNNNNNNGC 3 cut(s) 189, 447, 1681
NciI CCSGG 1 cut(s) 1523
NdeII GATC 8 cut(s) 121, 531, 932, 1099, 1590, 1788, 1930, 2139
NlaIII CATG 5 cut(s) 925, 932, 961, 1072, 1777
NlaIV GGNNCC 5 cut(s) 282, 1443, 1664, 1873, 1965
NmeAIII GCCGAG 1 cut(s) 1248
NmuCI GTSAC 1 cut(s) 640
NspI RCATGY 3 cut(s) 925, 1072, 1777
NspV TTCGAA 1 cut(s) 548
PaeI GCATGC 1 cut(s) 1072
PciI ACATGT 1 cut(s) 921
PctI GAATGC 1 cut(s) 1404
PfeI GAWTC 8 cut(s) 95, 298, 359, 1350, 1518, 1687, 1751, 2000
PinAI ACCGGT 1 cut(s) 416
PkrI GCNGC 3 cut(s) 309, 973, 976
PleI GAGTC 3 cut(s) 1203, 1303, 1812
PmaCI CACGTG 1 cut(s) 1496
PmlI CACGTG 1 cut(s) 1496
PpsI GAGTC 3 cut(s) 1203, 1303, 1812
Ppu21I YACGTR 1 cut(s) 1496
PscI ACATGT 1 cut(s) 921
PspCI CACGTG 1 cut(s) 1496
PspN4I GGNNCC 5 cut(s) 282, 1443, 1664, 1873, 1965
PspPI GGNCC 4 cut(s) 419, 1759, 1963, 2109
PsrI GAACNNNNNNTAC 2 cut(s) 1864, 1896
PstI CTGCAG 1 cut(s) 979
PstNI CAGNNNCTG 2 cut(s) 500, 535
PsuI RGATCY 5 cut(s) 121, 531, 1590, 1788, 1930
PvuII CAGCTG 1 cut(s) 974
RsaI GTAC 4 cut(s) 403, 461, 792, 1490
RsaNI GTAC 4 cut(s) 402, 460, 791, 1489
SalI GTCGAC 1 cut(s) 1806
SaqAI TTAA 9 cut(s) 147, 413, 477, 485, 617, 672, 1322, 1668, 2124
SatI GCNGC 3 cut(s) 308, 972, 975
Sau3AI GATC 8 cut(s) 121, 531, 932, 1099, 1590, 1788, 1930, 2139
Sau96I GGNCC 4 cut(s) 419, 1759, 1963, 2109
SchI GAGTC 3 cut(s) 1204, 1303, 1813
ScrFI CCNGG 1 cut(s) 1523
SfaNI GCATC 2 cut(s) 1236, 1616
SfcI CTRYAG 1 cut(s) 975
SfuI TTCGAA 1 cut(s) 548
SinI GGWCC 2 cut(s) 419, 1759
SmlI CTYRAG 5 cut(s) 1060, 1250, 1621, 1667, 2123
SmoI CTYRAG 5 cut(s) 1060, 1250, 1621, 1667, 2123
SphI GCATGC 1 cut(s) 1072
SsiI CCGC 2 cut(s) 621, 1439
SspI AATATT 1 cut(s) 2019
StyD4I CCNGG 1 cut(s) 1521
StyI CCWWGG 3 cut(s) 363, 884, 1915
TaaI ACNGT 8 cut(s) 629, 670, 678, 685, 897, 1008, 1358, 1468
TaiI ACGT 1 cut(s) 1498
TaqI TCGA 8 cut(s) 246, 409, 548, 612, 1049, 1386, 1512, 1807
TatI WGTACW 2 cut(s) 401, 1488
TfiI GAWTC 8 cut(s) 95, 298, 359, 1350, 1518, 1687, 1751, 2000
Tru1I TTAA 9 cut(s) 147, 413, 477, 485, 617, 672, 1322, 1668, 2124
Tru9I TTAA 9 cut(s) 147, 413, 477, 485, 617, 672, 1322, 1668, 2124
TscAI CASTG 5 cut(s) 72, 240, 688, 1085, 1714
TseFI GTSAC 1 cut(s) 640
TseI GCWGC 3 cut(s) 307, 971, 974
Tsp45I GTSAC 1 cut(s) 640
TspDTI ATGAA 7 cut(s) 218, 844, 917, 1037, 1645, 1875, 1890
TspGWI ACGGA 1 cut(s) 1155
TspRI CASTG 5 cut(s) 72, 240, 688, 1085, 1714
Vha464I CTTAAG 2 cut(s) 1667, 2123
VpaK11BI GGWCC 2 cut(s) 419, 1759
XbaI TCTAGA 4 cut(s) 319, 1315, 1373, 1456
XceI RCATGY 3 cut(s) 925, 1072, 1777
XcmI CCANNNNNNNNNTGG 3 cut(s) 125, 429, 801
XmaJI CCTAGG 1 cut(s) 1915
XmiI GTMKAC 2 cut(s) 1807, 1989
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.