FvH4_7g10130

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000024
Physical Location & Seq
Reverse (-)
9572284 .. 9575464
3181 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g10130.t1

Sequence Viewer

Length: 2865 bp
ATGGGTTTATCCAAGTGCTTGTTTCTGTTCTTCATCATCTATTTCTTCAAGGAGTGCAACGCCAGTACTTCGTCTGAGTCCTCTTATTGTCATGATGAGGAGAGCTCTGCCTTGCTACAATTCAAGGAGAGCTTTACTATCAGCGCATCCGCTTCGGGTTTACAGGGTGCTTATCCTAAAGTGTTGTCATGGAAACCACCTCAAGGAGGAAACAAAACCAACTGCTGCACATGGGATGGTGTCGAGTGTGACGAACAGACCGGTTATGTGATCGGGCTTGATCTTAGAAGCAGCTGTCTCTACGGCTCCATCAAGTCCAACAGCTCCCTCTTTCGTCTTGTTCATCTTCAGAAGCTGGACCTTGCCGATAATGACTTCAATTACTCTCAAATTCCTACTAGCATTAGGAATTTCCCTAGCCTCGCCTATCTTGACCTCTCTGCCTCTGTCTTTTCTGGTCGACTCCCAGCAGAAGTTTCACAGCTGGTTAAGTTGTCACTCCTCAATCTTTCTTCCAATACCGATCCTTCATCTGGTGTAGGATTGTTGAAACTTGATGGCAACAATTTCAGAAATCTTGTTAAAAACTTAACCAGACTAGAACATCTTCGTCTCCGTTACATCAACATATTTTCGACAATACCCTATTCCATGGCCAATCTATCATTTTTGACAACCCTCGACTTACTTCAGTGCAAGTTGTTTGGAGACTTCCCAGTAACAATTTTCCACTTACAAAACTTGAAAAGTCTCTATGTTAGAGACAACCAAGATCTCATTGGTCATTTGCCTGAATTTAATCAAAGTAGTCGTCTCATAACACTTGATCTTCACGGAACTAGATTTTCAGGTTACTTTCCTTCTTCCATAGGAAAGATTGATTCTTTGAAGCAGTTGGACGTGGCTGCATGCAATTTTTCAGAAGGCTTTGTTCCATCTTCCATAGGTAATCTTAGACAACTCGTTTATCTAGACCTTTCAGCAAACAAATTTGTAGGTCAGATTCCCGAGTCCTTTGCAAACCTTACCCAATTGACCGTCTTTAGGATTAGTACAAGTCCATTAACTGGTTCGGTCCCATCGTGGATAGGTAACTTCAGCAAGCTAGTTTACCTAGATTTTTCGTATAGTAGACTGAATGGTTCAATTCTTGCATCATTTTCCAATCTCACAAACCTTGAGATTCTTTATCTTCAGTACAATAACTTATTGAGAGGTAAAGTTGAGTTTCAACAATTCCAAAACCTTCAAAATCTCAACCAACTTGATCTTAGTGCTAATAGTCTGGAATTTCTCACTGATTCAGTGATTATGAATGCAACGGTTCCACAGTTTCAGGTTCTAGGACTGGCCAGATGCAATTTAACACAGTTCCCATATTTCTTAAGGTATCAAAAAAACCTGCAGAACTTGTACCTTGATCAAAACAAAATCCATGGCCAAGTACCGAAATGGATGTGGAACATGAGCACCGGAAGTTTGATGTACTTCAACCTTGGCACTAACCTCCTTTCAGGCTTTGAGCAACTTCCAAATGTCCTTCCTTGGGTAAACTTGCTCTTCTTAAGTCTTTCGTCCAACATGTTCCATGGGCTAGTACCAGTACCGGCAGCATCCACCTTAGGCTATGAAGTTCAGGATAACAACTTTTCTGGAGAAGTTCCGCCAGGAATATGCAATATGAGTTCTCTTCTGGCTCTTGATATGTCTAACAATAACTTCAGTGGCATGATTCCTCAGTGTTTCGGAAACTTTAGTGACCATCTGACTCTTTTGCTACTGAGAAATAACTTGTTTCATGGCAATCTTCCCCAAAAGTACAGCAACAAAAGCATCTTAAGGATGCTTGATGTGAGCCACAATCAATTGCAAGGGCCACTACCGAGGTCGTTGGTGAATTGTCTGCTGCTTGAGACCTTGGTTTTGTCAAACAATAACTTGAGTGATGTATTCCCCTTTTGGTTGCGAACTCTTCCAGAGCTGAAACTTTTGGCAATGCGGCATAATGGTTTCCATGGAGTGATAGGAAAGCCTGAAAACAATCAACGGTTCCCGAAGTTGCGTGTTTTAGATATGTCGTATAACAATTTCACCGGCCAGTTTCTAGCTGATTACATATTCACCGAGTATGGCATGAGACCAAATATAACGGTTAGCCAGACAACATACATAGAGGCTGACATCGGCTACGAAGCTGCTAATGGTGTCATCACTCTGTCTTATGGTTCCACGATTACAATAACCAGTAAAGGTGTCGATAGATACTATTCAAAGATTCAAGAAGCCTTTGCAGTCATTGATATCTCAAGCAACAAATTTGAAGGAAAGCTTGATGAATGGCTTGGGAATCTAAAAGGGCTTCGCTCATTGAATGTTTCCAACAACCTTCTTACCGGTGGGATCCCATCATCTTTGGGGAACTTAACGCAACTTGAATCGCTAGACCTTTCAAATAACCAGCTCTCAGGAGAGATCCCACAACAACTTGTGCAATTGACATTCCTTGCAGAGTTCGATGTCTCTCACAACAATCTCACAGGTCATATACCGAGTGGAACCCAACTCGGGGGGTTTAATGTCACTTCTTATGAGGGAAACACCGGGCTGTGTGGAGATCCATTGCCAAAGAAATGTGGGAACTCTAATACCCCGGATCAAGTGCCACCTTCTGGTAGAGAAGAAAATGATTCATGGCCTAGAACTGAATTTGATTGGATTTTTGTGCTGGCCGGATATGGAGGTGGGGTGGTGATAGGAGTGGTACTTGCAGACATAGCAATGACAAGGAGACCTGGAATGTTTCTTGAGATAGCTGGAACACTGAGCAGACTAATGCAAAGCATCACAAGCTGGAAGAAGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

955

Amino Acids

106.26

Weight (kDa)

6.05

Isoelectric Point (pI)

36.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 84 4e-07 Leucine rich repeat N-terminal domain
LRR_14 PF23598 98 - 183 2.4e-06 Leucine-rich repeat region
LRR_14 PF23598 192 - 302 9.5e-09 Leucine-rich repeat region
LRR_14 PF23598 272 - 496 4.6e-15 Leucine-rich repeat region
LRR_8 PF13855 344 - 403 3.8e-06 Leucine rich repeat
LRR_8 PF13855 613 - 670 2.9e-06 Leucine rich repeat
LRR_8 PF13855 637 - 697 5.8e-06 Leucine rich repeat
LRR_8 PF13855 765 - 821 9.7e-08 Leucine rich repeat
LRR_8 PF13855 786 - 845 9.2e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1410
AccB7I CCANNNNNTGG 2 cut(s) 1067, 2669
AccI GTMKAC 2 cut(s) 460, 1132
AciI CCGC 3 cut(s) 150, 1664, 1999
AclWI GGATC 6 cut(s) 518, 2395, 2408, 2467, 2609, 2661
AcoI YGGCCR 5 cut(s) 654, 1350, 1438, 2095, 2727
AcsI RAATTY 7 cut(s) 390, 409, 794, 989, 1289, 2315, 2705
AcuI CTGAAG 5 cut(s) 332, 674, 1081, 1178, 1705
AfiI CCNNNNNNNGG 9 cut(s) 203, 206, 533, 1044, 1067, 1546, 2565, 2566, 2669
AflII CTTAAG 3 cut(s) 1384, 1564, 1837
AflIII ACRYGT 1 cut(s) 1581
AgeI ACCGGT 2 cut(s) 260, 2393
AjiI CACGTC 1 cut(s) 901
AjnI CCWGG 2 cut(s) 1666, 2791
Alw21I GWGCWC 2 cut(s) 107, 1472
AlwI GGATC 6 cut(s) 518, 2395, 2408, 2467, 2609, 2661
AlwNI CAGNNNCTG 1 cut(s) 355
Ama87I CYCGRG 2 cut(s) 1007, 2564
AoxI GGCC 7 cut(s) 654, 1350, 1438, 1874, 2095, 2693, 2727
ApeKI GCWGC 6 cut(s) 225, 291, 905, 1610, 1906, 2195
ApoI RAATTY 7 cut(s) 390, 409, 794, 989, 1289, 2315, 2705
ArsI GACNNNNNNTTYG 4 cut(s) 796, 828, 1906, 1938
AsiGI ACCGGT 2 cut(s) 260, 2393
Asp700I GAANNNNTTC 1 cut(s) 606
AspLEI GCGC 1 cut(s) 146
AspS9I GGNCC 3 cut(s) 358, 1075, 1874
AsuC2I CCSGG 2 cut(s) 2602, 2651
AsuHPI GGTGA 4 cut(s) 1906, 2083, 2113, 2761
AvaI CYCGRG 2 cut(s) 1007, 2564
AvaII GGWCC 2 cut(s) 358, 1075
AxyI CCTNAGG 1 cut(s) 1621
BalI TGGCCA 3 cut(s) 656, 1352, 1440
BamHI GGATCC 1 cut(s) 2400
BanII GRGCYC 1 cut(s) 107
Bbv12I GWGCWC 2 cut(s) 107, 1472
BbvI GCAGC 6 cut(s) 212, 303, 892, 1622, 1893, 2182
BccI CCATC 7 cut(s) 230, 317, 551, 943, 1087, 1770, 2413
BceAI ACGGC 1 cut(s) 319
BcgI CGANNNNNNTGC 4 cut(s) 135, 169, 998, 1032
BciT130I CCWGG 2 cut(s) 1668, 2793
BclI TGATCA 1 cut(s) 1420
BcnI CCSGG 2 cut(s) 2602, 2651
BfmI CTRYAG 1 cut(s) 1403
BfrI CTTAAG 3 cut(s) 1384, 1564, 1837
BfuAI ACCTGC 1 cut(s) 1410
BglII AGATCT 1 cut(s) 772
BisI GCNGC 7 cut(s) 226, 292, 906, 1611, 1907, 2000, 2196
BlsI GCNGC 7 cut(s) 227, 293, 907, 1612, 1908, 2001, 2197
BmcAI AGTACT 1 cut(s) 67
Bme1390I CCNGG 4 cut(s) 1668, 2602, 2651, 2793
Bme18I GGWCC 2 cut(s) 358, 1075
BmeT110I CYCGRG 2 cut(s) 1007, 2564
BmgBI CACGTC 1 cut(s) 901
BmgT120I GGNCC 3 cut(s) 358, 1075, 1874
BmiI GGNNCC 7 cut(s) 307, 1077, 1326, 2051, 2227, 2402, 2557
BmrFI CCNGG 4 cut(s) 1668, 2602, 2651, 2793
BmrI ACTGGG 1 cut(s) 710
BmsI GCATC 7 cut(s) 155, 1163, 1346, 1622, 1833, 1842, 2850
BmuI ACTGGG 1 cut(s) 710
BplI GAGNNNNNCTC 2 cut(s) 89, 121
BpmI CTGGAG 1 cut(s) 1674
BpuEI CTTGAG 6 cut(s) 186, 1199, 1931, 1960, 2290, 2825
BpuMI CCSGG 2 cut(s) 2602, 2651
BsaI GGTCTC 3 cut(s) 1907, 2131, 2782
BsaJI CCNNGG 9 cut(s) 651, 1435, 1495, 1544, 1588, 1883, 1917, 2014, 2649
BsaWI WCCGGW 3 cut(s) 260, 1472, 2393
BsaXI ACNNNNNCTCC 2 cut(s) 2730, 2760
Bsc4I CCNNNNNNNGG 9 cut(s) 203, 206, 533, 1044, 1067, 1546, 2565, 2566, 2669
Bse118I RCCGGY 4 cut(s) 260, 1606, 2093, 2393
Bse1I ACTGG 7 cut(s) 63, 716, 1072, 1353, 1601, 2098, 2244
Bse21I CCTNAGG 1 cut(s) 1621
Bse3DI GCAATG 3 cut(s) 2001, 2618, 2784
BseBI CCWGG 2 cut(s) 1668, 2793
BseDI CCNNGG 9 cut(s) 651, 1435, 1495, 1544, 1588, 1883, 1917, 2014, 2649
BseGI GGATG 5 cut(s) 146, 241, 1461, 1613, 1848
BseLI CCNNNNNNNGG 9 cut(s) 203, 206, 533, 1044, 1067, 1546, 2565, 2566, 2669
BseMI GCAATG 3 cut(s) 2001, 2618, 2784
BseMII CTCAG 5 cut(s) 66, 1751, 1772, 2478, 2813
BseNI ACTGG 7 cut(s) 63, 716, 1072, 1353, 1601, 2098, 2244
BseRI GAGGAG 2 cut(s) 113, 491
BseXI GCAGC 6 cut(s) 212, 303, 892, 1622, 1893, 2182
BseYI CCCAGC 1 cut(s) 466
BsgI GTGCAG 1 cut(s) 211
BshFI GGCC 7 cut(s) 656, 1352, 1440, 1876, 2097, 2695, 2729
BshTI ACCGGT 2 cut(s) 260, 2393
BsiHKAI GWGCWC 2 cut(s) 107, 1472
BsiHKCI CYCGRG 2 cut(s) 1007, 2564
BsiSI CCGG 8 cut(s) 261, 1473, 1607, 2094, 2394, 2601, 2651, 2730
BslFI GGGAC 1 cut(s) 1061
BslI CCNNNNNNNGG 9 cut(s) 203, 206, 533, 1044, 1067, 1546, 2565, 2566, 2669
BsmBI CGTCTC 2 cut(s) 617, 818
BsmFI GGGAC 1 cut(s) 1061
BsmI GAATGC 1 cut(s) 1321
BsnI GGCC 7 cut(s) 656, 1352, 1440, 1876, 2097, 2695, 2729
Bso31I GGTCTC 3 cut(s) 1907, 2131, 2782
BsoBI CYCGRG 2 cut(s) 1007, 2564
Bsp1286I GDGCHC 2 cut(s) 107, 1472
Bsp19I CCATGG 4 cut(s) 651, 1435, 1588, 2014
BspACI CCGC 3 cut(s) 150, 1664, 1999
BspANI GGCC 7 cut(s) 656, 1352, 1440, 1876, 2097, 2695, 2729
BspCNI CTCAG 5 cut(s) 67, 1750, 1773, 2477, 2814
BspHI TCATGA 1 cut(s) 91
BspLI GGNNCC 7 cut(s) 307, 1077, 1326, 2051, 2227, 2402, 2557
BspMAI CTGCAG 1 cut(s) 1407
BspMI ACCTGC 1 cut(s) 1410
BspPI GGATC 6 cut(s) 518, 2395, 2408, 2467, 2609, 2661
BspQI GCTCTTC 1 cut(s) 1565
BspTI CTTAAG 3 cut(s) 1384, 1564, 1837
BspTNI GGTCTC 3 cut(s) 1907, 2131, 2782
BsrDI GCAATG 3 cut(s) 2001, 2618, 2784
BsrFI RCCGGY 4 cut(s) 260, 1606, 2093, 2393
BsrI ACTGG 7 cut(s) 63, 716, 1072, 1353, 1601, 2098, 2244
BssAI RCCGGY 4 cut(s) 260, 1606, 2093, 2393
BssECI CCNNGG 9 cut(s) 651, 1435, 1495, 1544, 1588, 1883, 1917, 2014, 2649
BssT1I CCWWGG 7 cut(s) 651, 1435, 1495, 1544, 1588, 1917, 2014
Bst2UI CCWGG 2 cut(s) 1668, 2793
Bst4CI ACNGT 6 cut(s) 1039, 1324, 1332, 1371, 2049, 2152
Bst6I CTCTTC 3 cut(s) 1565, 1695, 1977
BstAFI CTTAAG 3 cut(s) 1384, 1564, 1837
BstC8I GCNNGC 3 cut(s) 910, 1103, 2727
BstDEI CTNAG 9 cut(s) 75, 284, 953, 1271, 1621, 1737, 1781, 2464, 2822
BstDSI CCRYGG 4 cut(s) 651, 1435, 1588, 2014
BstENI CCTNNNNNAGG 1 cut(s) 204
BstF5I GGATG 5 cut(s) 146, 241, 1461, 1613, 1848
BstHHI GCGC 1 cut(s) 146
BstMWI GCNNNNNNNGC 3 cut(s) 1830, 2774, 2847
BstNI CCWGG 2 cut(s) 1668, 2793
BstNSI RCATGY 2 cut(s) 912, 1585
BstSCI CCNGG 4 cut(s) 1666, 2600, 2649, 2791
BstSFI CTRYAG 1 cut(s) 1403
BstV1I GCAGC 6 cut(s) 212, 303, 892, 1622, 1893, 2182
BstX2I RGATCY 4 cut(s) 772, 2400, 2472, 2614
BstYI RGATCY 4 cut(s) 772, 2400, 2472, 2614
Bsu36I CCTNAGG 1 cut(s) 1621
BsuRI GGCC 7 cut(s) 656, 1352, 1440, 1876, 2097, 2695, 2729
BtgI CCRYGG 4 cut(s) 651, 1435, 1588, 2014
BtrI CACGTC 1 cut(s) 901
BtsCI GGATG 5 cut(s) 146, 241, 1461, 1613, 1848
BtsIMutI CAGTG 6 cut(s) 698, 1296, 1311, 1729, 1745, 2819
BveI ACCTGC 1 cut(s) 1410
Cac8I GCNNGC 3 cut(s) 910, 1103, 2727
CaiI CAGNNNCTG 1 cut(s) 355
CciI TCATGA 1 cut(s) 91
CfoI GCGC 1 cut(s) 146
Cfr10I RCCGGY 4 cut(s) 260, 1606, 2093, 2393
Cfr13I GGNCC 3 cut(s) 358, 1075, 1874
CspAI ACCGGT 2 cut(s) 260, 2393
DdeI CTNAG 9 cut(s) 75, 284, 953, 1271, 1621, 1737, 1781, 2464, 2822
EaeI YGGCCR 5 cut(s) 654, 1350, 1438, 2095, 2727
Eam1104I CTCTTC 3 cut(s) 1565, 1695, 1977
EarI CTCTTC 3 cut(s) 1565, 1695, 1977
EciI GGCGGA 1 cut(s) 1653
Ecl136II GAGCTC 1 cut(s) 105
Eco130I CCWWGG 7 cut(s) 651, 1435, 1495, 1544, 1588, 1917, 2014
Eco24I GRGCYC 1 cut(s) 107
Eco31I GGTCTC 3 cut(s) 1907, 2131, 2782
Eco32I GATATC 1 cut(s) 2302
Eco47I GGWCC 2 cut(s) 358, 1075
Eco53kI GAGCTC 1 cut(s) 105
Eco57I CTGAAG 5 cut(s) 332, 674, 1081, 1178, 1705
Eco81I CCTNAGG 1 cut(s) 1621
Eco88I CYCGRG 2 cut(s) 1007, 2564
EcoICRI GAGCTC 1 cut(s) 105
EcoNI CCTNNNNNAGG 1 cut(s) 204
EcoRII CCWGG 2 cut(s) 1666, 2791
EcoRV GATATC 1 cut(s) 2302
EcoT14I CCWWGG 7 cut(s) 651, 1435, 1495, 1544, 1588, 1917, 2014
EcoT38I GRGCYC 1 cut(s) 107
ErhI CCWWGG 7 cut(s) 651, 1435, 1495, 1544, 1588, 1917, 2014
Esp3I CGTCTC 2 cut(s) 617, 818
FalI AAGNNNNNCTT 4 cut(s) 116, 148, 2313, 2345
FaqI GGGAC 1 cut(s) 1061
FbaI TGATCA 1 cut(s) 1420
FblI GTMKAC 2 cut(s) 460, 1132
Fnu4HI GCNGC 7 cut(s) 226, 292, 906, 1611, 1907, 2000, 2196
FokI GGATG 5 cut(s) 133, 248, 1468, 1600, 1855
FriOI GRGCYC 1 cut(s) 107
Fsp4HI GCNGC 7 cut(s) 226, 292, 906, 1611, 1907, 2000, 2196
GlaI GCGC 1 cut(s) 145
GluI GCNGC 7 cut(s) 226, 292, 906, 1611, 1907, 2000, 2196
GsaI CCCAGC 1 cut(s) 470
GsuI CTGGAG 1 cut(s) 1674
HaeIII GGCC 7 cut(s) 656, 1352, 1440, 1876, 2097, 2695, 2729
HapII CCGG 8 cut(s) 261, 1473, 1607, 2094, 2394, 2601, 2651, 2730
HhaI GCGC 1 cut(s) 146
Hin6I GCGC 1 cut(s) 144
HinP1I GCGC 1 cut(s) 144
HincII GTYRAC 1 cut(s) 461
HindII GTYRAC 1 cut(s) 461
HindIII AAGCTT 1 cut(s) 2327
HpaII CCGG 8 cut(s) 261, 1473, 1607, 2094, 2394, 2601, 2651, 2730
HphI GGTGA 4 cut(s) 1906, 2083, 2113, 2761
Hpy166II GTNNAC 5 cut(s) 161, 461, 1111, 1133, 1552
Hpy188I TCNGA 7 cut(s) 76, 351, 572, 922, 1002, 1748, 1767
Hpy8I GTNNAC 5 cut(s) 161, 461, 1111, 1133, 1552
HpyAV CCTTC 8 cut(s) 537, 870, 917, 1256, 1550, 2315, 2396, 2676
HpyCH4III ACNGT 6 cut(s) 1039, 1324, 1332, 1371, 2049, 2152
HpyCH4IV ACGT 1 cut(s) 900
HpyF10VI GCNNNNNNNGC 3 cut(s) 1830, 2774, 2847
HpyF3I CTNAG 9 cut(s) 75, 284, 953, 1271, 1621, 1737, 1781, 2464, 2822
HpySE526I ACGT 1 cut(s) 900
HspAI GCGC 1 cut(s) 144
Ksp22I TGATCA 1 cut(s) 1420
LguI GCTCTTC 1 cut(s) 1565
LmnI GCTCC 2 cut(s) 311, 329
Lsp1109I GCAGC 6 cut(s) 212, 303, 892, 1622, 1893, 2182
LweI GCATC 7 cut(s) 155, 1163, 1346, 1622, 1833, 1842, 2850
MaeII ACGT 1 cut(s) 900
MaeIII GTNAC 8 cut(s) 248, 495, 617, 718, 851, 1091, 1757, 2578
MfeI CAATTG 3 cut(s) 1031, 1865, 2492
MflI RGATCY 4 cut(s) 772, 2400, 2472, 2614
MhlI GDGCHC 2 cut(s) 107, 1472
MlsI TGGCCA 3 cut(s) 656, 1352, 1440
MluNI TGGCCA 3 cut(s) 656, 1352, 1440
MlyI GAGTC 4 cut(s) 86, 456, 1019, 1762
MmeI TCCRAC 4 cut(s) 342, 876, 1602, 2403
Mox20I TGGCCA 3 cut(s) 656, 1352, 1440
MroXI GAANNNNTTC 1 cut(s) 606
MscI TGGCCA 3 cut(s) 656, 1352, 1440
MslI CAYNNNNRTG 1 cut(s) 2777
Msp20I TGGCCA 3 cut(s) 656, 1352, 1440
MspA1I CMGCKG 2 cut(s) 294, 484
MspCI CTTAAG 3 cut(s) 1384, 1564, 1837
MspI CCGG 8 cut(s) 261, 1473, 1607, 2094, 2394, 2601, 2651, 2730
MspR9I CCNGG 4 cut(s) 1668, 2602, 2651, 2793
MunI CAATTG 3 cut(s) 1031, 1865, 2492
Mva1269I GAATGC 1 cut(s) 1321
MvaI CCWGG 2 cut(s) 1668, 2793
MwoI GCNNNNNNNGC 3 cut(s) 1830, 2774, 2847
NciI CCSGG 2 cut(s) 2602, 2651
NcoI CCATGG 4 cut(s) 651, 1435, 1588, 2014
NlaIV GGNNCC 7 cut(s) 307, 1077, 1326, 2051, 2227, 2402, 2557
NmuCI GTSAC 4 cut(s) 248, 495, 1757, 2578
NspI RCATGY 2 cut(s) 912, 1585
PaeI GCATGC 1 cut(s) 912
PagI TCATGA 1 cut(s) 91
PciI ACATGT 1 cut(s) 1581
PciSI GCTCTTC 1 cut(s) 1565
PcsI WCGNNNNNNNCGW 2 cut(s) 249, 1079
PctI GAATGC 1 cut(s) 1321
PdmI GAANNNNTTC 1 cut(s) 606
PfeI GAWTC 9 cut(s) 881, 1003, 1183, 1301, 1732, 2275, 2347, 2435, 2687
PflMI CCANNNNNTGG 2 cut(s) 1067, 2669
PinAI ACCGGT 2 cut(s) 260, 2393
PkrI GCNGC 7 cut(s) 227, 293, 907, 1612, 1908, 2001, 2197
PleI GAGTC 4 cut(s) 85, 456, 1018, 1762
PpsI GAGTC 4 cut(s) 85, 456, 1018, 1762
PscI ACATGT 1 cut(s) 1581
Psp124BI GAGCTC 1 cut(s) 107
Psp6I CCWGG 2 cut(s) 1666, 2791
PspFI CCCAGC 1 cut(s) 466
PspGI CCWGG 2 cut(s) 1666, 2791
PspN4I GGNNCC 7 cut(s) 307, 1077, 1326, 2051, 2227, 2402, 2557
PspPI GGNCC 3 cut(s) 358, 1075, 1874
PstI CTGCAG 1 cut(s) 1407
PstNI CAGNNNCTG 1 cut(s) 355
PsuI RGATCY 4 cut(s) 772, 2400, 2472, 2614
PvuII CAGCTG 2 cut(s) 294, 484
RseI CAYNNNNRTG 1 cut(s) 2777
SacI GAGCTC 1 cut(s) 107
SalI GTCGAC 1 cut(s) 459
SapI GCTCTTC 1 cut(s) 1565
SatI GCNGC 7 cut(s) 226, 292, 906, 1611, 1907, 2000, 2196
Sau96I GGNCC 3 cut(s) 358, 1075, 1874
ScaI AGTACT 1 cut(s) 67
SchI GAGTC 4 cut(s) 86, 456, 1019, 1762
ScrFI CCNGG 4 cut(s) 1668, 2602, 2651, 2793
SduI GDGCHC 2 cut(s) 107, 1472
SfaNI GCATC 7 cut(s) 155, 1163, 1346, 1622, 1833, 1842, 2850
SfcI CTRYAG 1 cut(s) 1403
SinI GGWCC 2 cut(s) 358, 1075
SmiMI CAYNNNNRTG 1 cut(s) 2777
SmlI CTYRAG 9 cut(s) 201, 1178, 1384, 1564, 1837, 1910, 1939, 2305, 2804
SmoI CTYRAG 9 cut(s) 201, 1178, 1384, 1564, 1837, 1910, 1939, 2305, 2804
SphI GCATGC 1 cut(s) 912
SsiI CCGC 3 cut(s) 150, 1664, 1999
SstI GAGCTC 1 cut(s) 107
StyD4I CCNGG 4 cut(s) 1666, 2600, 2649, 2791
StyI CCWWGG 7 cut(s) 651, 1435, 1495, 1544, 1588, 1917, 2014
TaaI ACNGT 6 cut(s) 1039, 1324, 1332, 1371, 2049, 2152
TaiI ACGT 1 cut(s) 903
TaqI TCGA 6 cut(s) 243, 460, 635, 681, 2256, 2514
TaqII GACCGA 1 cut(s) 1063
TatI WGTACW 5 cut(s) 65, 1052, 1197, 1485, 1818
TauI GCSGC 1 cut(s) 2002
TfiI GAWTC 9 cut(s) 881, 1003, 1183, 1301, 1732, 2275, 2347, 2435, 2687
TscAI CASTG 6 cut(s) 698, 1303, 1311, 1729, 1745, 2826
TseFI GTSAC 4 cut(s) 248, 495, 1757, 2578
TseI GCWGC 6 cut(s) 225, 291, 905, 1610, 1906, 2195
Tsp45I GTSAC 4 cut(s) 248, 495, 1757, 2578
TspDTI ATGAA 8 cut(s) 22, 332, 519, 1328, 1644, 1787, 2349, 2679
TspGWI ACGGA 2 cut(s) 605, 849
TspRI CASTG 6 cut(s) 698, 1303, 1311, 1729, 1745, 2826
Van91I CCANNNNNTGG 2 cut(s) 1067, 2669
Vha464I CTTAAG 3 cut(s) 1384, 1564, 1837
VpaK11BI GGWCC 2 cut(s) 358, 1075
XagI CCTNNNNNAGG 1 cut(s) 204
XapI RAATTY 7 cut(s) 390, 409, 794, 989, 1289, 2315, 2705
XbaI TCTAGA 1 cut(s) 970
XceI RCATGY 2 cut(s) 912, 1585
XcmI CCANNNNNNNNNTGG 1 cut(s) 776
XmiI GTMKAC 2 cut(s) 460, 1132
XmnI GAANNNNTTC 1 cut(s) 606
ZrmI AGTACT 1 cut(s) 67
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.