Rh1AG348900

Receptor-like protein 12

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Reverse (-)
58566791 .. 58569968
3178 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG348900.1

Sequence Viewer

Length: 2847 bp
ATGATGGGGTTATCCCATTGCTTGTTACTATTTTTCATCTTTTTCTTCAAGGGGTGCAATACCAGTACTTCCCATGAGCTATCTTATTGTCATGATGAGGAGAGCTCTGCCTTGCTACAATTCAAGCAAAGCTTTACTATCAATGCATCTGCTTCGGGTTTAGAGGGTGCTTATCCGAAAGTGTTGTCCTGGAAACAAGCTCAAGGAGGAAACAACACCAGCTGCTGCACATGGGATGGGGTCGAGTGTGACGAACACACGGGTCATGTGATCGGGCTTGATCTCAGAAGCAGTTGTCTCTACGGCTCTATTCACTCCAACAGCTCCCTCTTCCGTCTTGTTCACCTTCAGAGGCTGGACCTTGCCGATAATCACTTCAATTACTCTCAAATTCCTACTAGCATTAGGAATTTTCCAAGGCTCACCCATCTCGACCTCTCTGCCTCTGTATTTTCTGGTCGAGTCCCGTCGGAAGTTTCACAGTTGGTCAAGTTGTCACTTCTTAATCTTTCTTTCAACACCGAACCTTCTTCTTCGGGTGTAGGATTGTTGACACTTGATGGATCCAATTTCAGAAGTCTAGTTCAAAACTTAACTAATCTTCAACATCTTCGTCTCCGTTTCATCAACATATCTTCACCAATACCTGATTCCATGGCCAATTTATCATTTTTGACAACCCTTGACTTACATCAGTGTCACTTGTTTGGAGACTTCCCAGTTAGAATTTTCCACTTACAAACCTTGCAAAATCTCTATCTCAGAGACAACCTAGATCTCATTGGTTATTTGCCTGAATTTAATAAAAGTAGTCGTCTCATAACTCTCGATCTTCATGGAACTAGATTTTCAGGGAACTTAGCCTTTTCGATCAAAAACCTTGGTTCTTTGAAACAGTTGGATGTGGGTGCGTGCAATTTTTCAGGAGGGTTGGTTCCATCTTCGCTAGGTAATCTCAGAGAACTGACTTATCTAGACATTTCATTAAACCAATTTGGAGGTCCTGTTCCAGATTCTTTTGCAAACCTTACAAAATTGTTTGTTTTTAGGATCAGTACGAGTCTACTAACTGGTCCAATCCCATCCTGGCTGGGTAATTTTAGCGAACTAGAGTACCTAGACTTTGGTTATAACAGATTGGATGGTTCAATTCCTACATTTTTTTCCAATCTCACGAATCTGCAGATTCTTTATCTTCAGTCCAATAACCTGAGTGGTATAGTGGAGTTTCAAACATTTCAAAACCTCCAAAATCTCTACCAACTCGATCTAAGATCTAATTCTTTGGAATTTTTCTCTGAATCCACAGCTGTGAATGCAAGTACTGTTCCACAGTTCACCCATCTAAGGTTAACTTCATGCAACGTAAAAGAGTTCCCATATTTCCTGAGATATCAAAAACATTTGGAGCGGTTGATGCTCAATAAAAACAAAATTCATGGTCAAATACCGAAATGGATGTGGAACATGAGCACAAAATCCTTGATTCAGCTAGACATTTCTGAAAATTTCCTTTCAGGCCAACTTCCTGTTTTCATTCCTTGGGTCAACCAACTATACTTGAGTCTTGCTTCCAACATGTTCCATGGGCCACTGCCGATACCTCCATCGTCCACTTTAGTCTATCAAGCTAATGACAACAAATTTACTGGAAAAGTTTCACCAGTGATCTGCAATATGAGTTCTCTTATGGCCCTTGATTTGTCCAATAACAACTTGAGTGGCATGATTCCGCAGTGTTTGGGAAACTTTAGTGATCTATTGACACTTCTAATTCTTGGAAATAACTCGTTTCATGGCACCCTACCGCAAACATACACCAACAAAAGCAGCTTGAGGATACTTGATGTGAGTCAAAATCAATTGCAAGGGCAACTACCAAGGTCATTGGCGAATTGTCTGATGCTTGAGACTTTGGTCCTGTCAAACAATTACTTCAATGATGTCTTTCCATTTTGGATGAGTACTCTACCTGAGTTGAAACTTTTGGCAATGCGGCATAATGCTTTCGAAGGATTGATAAGAAAGCCTGAAAACAATCAGCAGTTCCCAAAGTTGCGTATTTTAGATATTTCTCACAATAACTTCACAGGCAAGTTTGTAGCTGAATACATCTTCTCCATGTATGCCATGAGATCAGTCAACCAGACGACCTATATGGCGGTTGGCATCAATTACATCTCTGGTAATGATTGGCTCACTTATCCTTCCACGATGACAATAACCATTAAAGGTGTGGATAGATACTATTCAAGGGTTCAAGAAGCTTTTGCAGTCATTGATATCTCAAGCAACAAATTTGAAGGGAAGATTGATGAATCCATTGGGAGTCTAAAAGGGCTTTGGTCACTTAATTTTTCCAATAATCTTCTCAGCGGCCGTATCCCGTCATCGTTTGGGCACTTGACGAATCTTGAAGCACTAGACCTTTCCAATAACAAGCTCTGGGGAGAGATTCCCAAACAATTGGCACAGCTGACATTCCTTGAACAATTTGATGTCTCTCACAACAATCTCACAGGTCCAATACCGCGTGGACCGCAACTCAATACCTTCAATATCACTTCATATGAGGGAAACCCCGGATTGTGCGGAGATCCTTTGCCAAAGAGATGTCAGAGCTCTAACGCCCCGCCGCAACTGCCACCTTCAAACATAGAAGAAAATGATTCTGGAAGTGAATTTGAATGGGCTTTTGTGCTCGCTGGATGCGGAAGTGGGTTCGTGGTGGGAGTTGTGCTTGCTGACTTGGCCATCACACGGAGGCGTGAGTTCTTTCTTGAGATAGTTGGAACGTTGATCATACTAATGGAAAGGATCACAAGCTGGAAGGGGTTTGGACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

948

Amino Acids

106.21

Weight (kDa)

6.37

Isoelectric Point (pI)

42.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 84 1.8e-07 Leucine rich repeat N-terminal domain
LRR_14 PF23598 93 - 185 7.5e-06 Leucine-rich repeat region
LRR_14 PF23598 195 - 302 6.5e-08 Leucine-rich repeat region
LRR_14 PF23598 272 - 501 6.5e-13 Leucine-rich repeat region
LRR_8 PF13855 356 - 404 2.4e-06 Leucine rich repeat
LRR_8 PF13855 636 - 696 1.3e-06 Leucine rich repeat
LRR_8 PF13855 759 - 815 4.1e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1131
AccB1I GGYRCC 1 cut(s) 1799
AccBSI CCGCTC 1 cut(s) 1411
AccI GTMKAC 1 cut(s) 1063
AccII CGCG 1 cut(s) 2533
AclI AACGTT 1 cut(s) 2795
AclWI GGATC 5 cut(s) 558, 571, 1058, 2591, 2825
AcoI YGGCCR 3 cut(s) 657, 2377, 2751
AcuI CTGAAG 2 cut(s) 332, 1181
AfaI GTAC 5 cut(s) 67, 1057, 1115, 1324, 1966
AfiI CCNNNNNNNGG 2 cut(s) 1347, 2760
AflIII ACRYGT 1 cut(s) 1578
AjnI CCWGG 2 cut(s) 188, 1085
AjuI GAANNNNNNNTTGG 2 cut(s) 634, 666
AleI CACNNNNGTG 1 cut(s) 1310
AloI GAACNNNNNNTCC 4 cut(s) 918, 950, 990, 1022
Alw21I GWGCWC 4 cut(s) 107, 1475, 2624, 2703
Alw26I GTCTC 7 cut(s) 302, 620, 705, 759, 821, 1904, 2506
AlwI GGATC 5 cut(s) 558, 571, 1058, 2591, 2825
AlwNI CAGNNNCTG 2 cut(s) 225, 355
AoxI GGCC 6 cut(s) 657, 1519, 1589, 1692, 2377, 2751
ApeKI GCWGC 3 cut(s) 222, 225, 1830
ArsI GACNNNNNNTTYG 2 cut(s) 170, 202
Asp700I GAANNNNTTC 1 cut(s) 1657
AspS9I GGNCC 8 cut(s) 358, 1001, 1073, 1589, 1693, 1918, 2522, 2537
AsuC2I CCSGG 1 cut(s) 2583
AsuHPI GGTGA 5 cut(s) 335, 415, 630, 1330, 1653
AsuII TTCGAA 1 cut(s) 2010
AvaII GGWCC 6 cut(s) 358, 1001, 1073, 1918, 2522, 2537
BaeGI GKGCMC 1 cut(s) 2403
BaeI ACNNNNGTAYC 2 cut(s) 1097, 1130
BalI TGGCCA 2 cut(s) 659, 2753
BamHI GGATCC 1 cut(s) 563
BanI GGYRCC 1 cut(s) 1799
BanII GRGCYC 2 cut(s) 107, 2624
Bbv12I GWGCWC 4 cut(s) 107, 1475, 2624, 2703
BbvI GCAGC 3 cut(s) 209, 212, 1842
BccI CCATC 9 cut(s) 230, 435, 554, 946, 1090, 1136, 1350, 1615, 2762
BceAI ACGGC 2 cut(s) 319, 2364
BcgI CGANNNNNNTGC 4 cut(s) 135, 169, 422, 456
BciT130I CCWGG 2 cut(s) 190, 1087
BciVI GTATCC 2 cut(s) 1833, 2393
BclI TGATCA 1 cut(s) 2799
BcnI CCSGG 1 cut(s) 2583
BcoDI GTCTC 7 cut(s) 302, 620, 705, 759, 821, 1904, 2506
BfmI CTRYAG 1 cut(s) 1181
BfuI GTATCC 2 cut(s) 1833, 2393
BglII AGATCT 2 cut(s) 775, 1274
BisI GCNGC 6 cut(s) 223, 226, 1831, 1997, 2377, 2636
BlsI GCNGC 6 cut(s) 224, 227, 1832, 1998, 2378, 2637
BmcAI AGTACT 3 cut(s) 67, 1324, 1966
Bme1390I CCNGG 3 cut(s) 190, 1087, 2583
Bme18I GGWCC 6 cut(s) 358, 1001, 1073, 1918, 2522, 2537
BmgT120I GGNCC 8 cut(s) 358, 1001, 1073, 1589, 1693, 1918, 2522, 2537
BmiI GGNNCC 3 cut(s) 565, 936, 1801
BmrFI CCNGG 3 cut(s) 190, 1087, 2583
BmrI ACTGGG 1 cut(s) 713
BmsI GCATC 5 cut(s) 155, 1407, 1893, 2178, 2699
BmuI ACTGGG 1 cut(s) 713
BoxI GACNNNNGTC 1 cut(s) 1916
BplI GAGNNNNNCTC 2 cut(s) 89, 121
Bpu14I TTCGAA 1 cut(s) 2010
BpuEI CTTGAG 7 cut(s) 186, 1582, 1738, 1855, 1928, 2272, 2801
BpuMI CCSGG 1 cut(s) 2583
BsaJI CCNNGG 7 cut(s) 416, 654, 880, 1541, 1585, 1880, 2581
BsaXI ACNNNNNCTCC 6 cut(s) 918, 948, 990, 1020, 2102, 2132
Bsc4I CCNNNNNNNGG 2 cut(s) 1347, 2760
Bse1I ACTGG 5 cut(s) 63, 719, 1075, 1654, 1664
Bse3DI GCAATG 2 cut(s) 16, 1998
BseBI CCWGG 2 cut(s) 190, 1087
BseDI CCNNGG 7 cut(s) 416, 654, 880, 1541, 1585, 1880, 2581
BseGI GGATG 7 cut(s) 241, 907, 1082, 1147, 1464, 1965, 2714
BseLI CCNNNNNNNGG 2 cut(s) 1347, 2760
BseMI GCAATG 2 cut(s) 16, 1998
BseMII CTCAG 7 cut(s) 298, 775, 970, 1202, 1379, 1965, 2386
BseNI ACTGG 5 cut(s) 63, 719, 1075, 1654, 1664
BseRI GAGGAG 1 cut(s) 113
BseSI GKGCMC 1 cut(s) 2403
BseX3I CGGCCG 1 cut(s) 2377
BseXI GCAGC 3 cut(s) 209, 212, 1842
BseYI CCCAGC 1 cut(s) 1090
BsgI GTGCAG 1 cut(s) 211
Bsh1236I CGCG 1 cut(s) 2533
Bsh1285I CGRYCG 1 cut(s) 2380
BshFI GGCC 6 cut(s) 659, 1521, 1591, 1694, 2379, 2753
BshNI GGYRCC 1 cut(s) 1799
BsiEI CGRYCG 1 cut(s) 2380
BsiHKAI GWGCWC 4 cut(s) 107, 1475, 2624, 2703
BsiSI CCGG 1 cut(s) 2583
BslFI GGGAC 1 cut(s) 449
BslI CCNNNNNNNGG 2 cut(s) 1347, 2760
BsmAI GTCTC 7 cut(s) 302, 620, 705, 759, 821, 1904, 2506
BsmBI CGTCTC 2 cut(s) 620, 821
BsmFI GGGAC 1 cut(s) 449
BsmI GAATGC 1 cut(s) 1321
BsnI GGCC 6 cut(s) 659, 1521, 1591, 1694, 2379, 2753
Bsp119I TTCGAA 1 cut(s) 2010
Bsp1286I GDGCHC 5 cut(s) 107, 1475, 2403, 2624, 2703
Bsp19I CCATGG 2 cut(s) 654, 1585
BspANI GGCC 6 cut(s) 659, 1521, 1591, 1694, 2379, 2753
BspCNI CTCAG 7 cut(s) 297, 774, 969, 1203, 1380, 1966, 2385
BspFNI CGCG 1 cut(s) 2533
BspHI TCATGA 1 cut(s) 91
BspLI GGNNCC 3 cut(s) 565, 936, 1801
BspMAI CTGCAG 1 cut(s) 1185
BspPI GGATC 5 cut(s) 558, 571, 1058, 2591, 2825
BspT104I TTCGAA 1 cut(s) 2010
BspT107I GGYRCC 1 cut(s) 1799
BsrBI CCGCTC 1 cut(s) 1411
BsrDI GCAATG 2 cut(s) 16, 1998
BsrI ACTGG 5 cut(s) 63, 719, 1075, 1654, 1664
BssECI CCNNGG 7 cut(s) 416, 654, 880, 1541, 1585, 1880, 2581
BssT1I CCWWGG 6 cut(s) 416, 654, 880, 1541, 1585, 1880
Bst2UI CCWGG 2 cut(s) 190, 1087
Bst4CI ACNGT 4 cut(s) 483, 897, 1327, 1335
Bst6I CTCTTC 1 cut(s) 335
BstBI TTCGAA 1 cut(s) 2010
BstC8I GCNNGC 3 cut(s) 913, 2703, 2742
BstDSI CCRYGG 2 cut(s) 654, 1585
BstF5I GGATG 7 cut(s) 241, 907, 1082, 1147, 1464, 1965, 2714
BstFNI CGCG 1 cut(s) 2533
BstMAI GTCTC 7 cut(s) 302, 620, 705, 759, 821, 1904, 2506
BstMCI CGRYCG 1 cut(s) 2380
BstMWI GCNNNNNNNGC 5 cut(s) 1316, 1417, 2539, 2641, 2750
BstNI CCWGG 2 cut(s) 190, 1087
BstNSI RCATGY 1 cut(s) 1582
BstPAI GACNNNNGTC 1 cut(s) 1916
BstSCI CCNGG 3 cut(s) 188, 1085, 2581
BstSFI CTRYAG 1 cut(s) 1181
BstSLI GKGCMC 1 cut(s) 2403
BstUI CGCG 1 cut(s) 2533
BstV1I GCAGC 3 cut(s) 209, 212, 1842
BstX2I RGATCY 4 cut(s) 563, 775, 1274, 2596
BstXI CCANNNNNNTGG 1 cut(s) 2467
BstYI RGATCY 4 cut(s) 563, 775, 1274, 2596
BstZI CGGCCG 1 cut(s) 2377
BsuI GTATCC 2 cut(s) 1833, 2393
BsuRI GGCC 6 cut(s) 659, 1521, 1591, 1694, 2379, 2753
BtgI CCRYGG 2 cut(s) 654, 1585
BtsCI GGATG 7 cut(s) 241, 907, 1082, 1147, 1464, 1965, 2714
BtsI GCAGTG 2 cut(s) 1592, 1742
BtsIMutI CAGTG 4 cut(s) 701, 1592, 1671, 1742
Cac8I GCNNGC 3 cut(s) 913, 2703, 2742
CaiI CAGNNNCTG 2 cut(s) 225, 355
CciI TCATGA 1 cut(s) 91
Cfr13I GGNCC 8 cut(s) 358, 1001, 1073, 1589, 1693, 1918, 2522, 2537
Csp6I GTAC 5 cut(s) 66, 1056, 1114, 1323, 1965
CspCI CAANNNNNGTGG 2 cut(s) 1702, 1737
CviQI GTAC 5 cut(s) 66, 1056, 1114, 1323, 1965
EaeI YGGCCR 3 cut(s) 657, 2377, 2751
EagI CGGCCG 1 cut(s) 2377
Eam1104I CTCTTC 1 cut(s) 335
EarI CTCTTC 1 cut(s) 335
Ecl136II GAGCTC 2 cut(s) 105, 2622
EclXI CGGCCG 1 cut(s) 2377
Eco130I CCWWGG 6 cut(s) 416, 654, 880, 1541, 1585, 1880
Eco24I GRGCYC 2 cut(s) 107, 2624
Eco32I GATATC 2 cut(s) 1394, 2284
Eco47I GGWCC 6 cut(s) 358, 1001, 1073, 1918, 2522, 2537
Eco52I CGGCCG 1 cut(s) 2377
Eco53kI GAGCTC 2 cut(s) 105, 2622
Eco57I CTGAAG 2 cut(s) 332, 1181
EcoICRI GAGCTC 2 cut(s) 105, 2622
EcoO109I RGGNCCY 1 cut(s) 1001
EcoRII CCWGG 2 cut(s) 188, 1085
EcoRV GATATC 2 cut(s) 1394, 2284
EcoT14I CCWWGG 6 cut(s) 416, 654, 880, 1541, 1585, 1880
EcoT22I ATGCAT 1 cut(s) 148
EcoT38I GRGCYC 2 cut(s) 107, 2624
ErhI CCWWGG 6 cut(s) 416, 654, 880, 1541, 1585, 1880
Esp3I CGTCTC 2 cut(s) 620, 821
FalI AAGNNNNNCTT 4 cut(s) 116, 148, 1339, 1371
FaqI GGGAC 1 cut(s) 449
FauI CCCGC 1 cut(s) 2640
FauNDI CATATG 1 cut(s) 2569
FbaI TGATCA 1 cut(s) 2799
FblI GTMKAC 1 cut(s) 1063
Fnu4HI GCNGC 6 cut(s) 223, 226, 1831, 1997, 2377, 2636
FokI GGATG 7 cut(s) 248, 914, 1069, 1154, 1471, 1972, 2721
FriOI GRGCYC 2 cut(s) 107, 2624
Fsp4HI GCNGC 6 cut(s) 223, 226, 1831, 1997, 2377, 2636
GluI GCNGC 6 cut(s) 223, 226, 1831, 1997, 2377, 2636
GsaI CCCAGC 1 cut(s) 1094
HaeIII GGCC 6 cut(s) 659, 1521, 1591, 1694, 2379, 2753
HapII CCGG 1 cut(s) 2583
HincII GTYRAC 4 cut(s) 552, 1353, 1549, 2143
HindII GTYRAC 4 cut(s) 552, 1353, 1549, 2143
HindIII AAGCTT 2 cut(s) 130, 2265
HpaI GTTAAC 1 cut(s) 1353
HpaII CCGG 1 cut(s) 2583
HphI GGTGA 5 cut(s) 335, 415, 630, 1330, 1653
Hpy166II GTNNAC 9 cut(s) 343, 552, 1064, 1338, 1353, 1549, 1614, 2143, 2537
Hpy8I GTNNAC 9 cut(s) 343, 552, 1064, 1338, 1353, 1549, 1614, 2143, 2537
Hpy99I CGWCG 1 cut(s) 472
HpyAV CCTTC 8 cut(s) 356, 537, 2006, 2217, 2297, 2563, 2658, 2824
HpyCH4III ACNGT 4 cut(s) 483, 897, 1327, 1335
HpyCH4IV ACGT 2 cut(s) 1365, 2795
HpyF10VI GCNNNNNNNGC 5 cut(s) 1316, 1417, 2539, 2641, 2750
HpySE526I ACGT 2 cut(s) 1365, 2795
Ksp22I TGATCA 1 cut(s) 2799
KspAI GTTAAC 1 cut(s) 1353
LmnI GCTCC 2 cut(s) 329, 1408
Lsp1109I GCAGC 3 cut(s) 209, 212, 1842
LweI GCATC 5 cut(s) 155, 1407, 1893, 2178, 2699
MaeII ACGT 2 cut(s) 1365, 2795
MaeIII GTNAC 5 cut(s) 24, 248, 495, 698, 2346
MbiI CCGCTC 1 cut(s) 1411
MfeI CAATTG 2 cut(s) 1862, 2465
MflI RGATCY 4 cut(s) 563, 775, 1274, 2596
MhlI GDGCHC 5 cut(s) 107, 1475, 2403, 2624, 2703
MlsI TGGCCA 2 cut(s) 659, 2753
MluNI TGGCCA 2 cut(s) 659, 2753
MlyI GAGTC 5 cut(s) 471, 1069, 1573, 1861, 2338
MmeI TCCRAC 5 cut(s) 342, 450, 879, 1599, 2770
Mox20I TGGCCA 2 cut(s) 659, 2753
Mph1103I ATGCAT 1 cut(s) 148
MroXI GAANNNNTTC 1 cut(s) 1657
MscI TGGCCA 2 cut(s) 659, 2753
MseI TTAA 7 cut(s) 504, 593, 801, 986, 1352, 2229, 2352
MslI CAYNNNNRTG 2 cut(s) 1310, 2807
Msp20I TGGCCA 2 cut(s) 659, 2753
MspA1I CMGCKG 4 cut(s) 222, 1310, 2376, 2476
MspI CCGG 1 cut(s) 2583
MspR9I CCNGG 3 cut(s) 190, 1087, 2583
MunI CAATTG 2 cut(s) 1862, 2465
Mva1269I GAATGC 1 cut(s) 1321
MvaI CCWGG 2 cut(s) 190, 1087
MvnI CGCG 1 cut(s) 2533
MwoI GCNNNNNNNGC 5 cut(s) 1316, 1417, 2539, 2641, 2750
NciI CCSGG 1 cut(s) 2583
NcoI CCATGG 2 cut(s) 654, 1585
NdeI CATATG 1 cut(s) 2569
NlaIV GGNNCC 3 cut(s) 565, 936, 1801
NmuCI GTSAC 4 cut(s) 248, 495, 698, 2346
NsiI ATGCAT 1 cut(s) 148
NspI RCATGY 1 cut(s) 1582
NspV TTCGAA 1 cut(s) 2010
OliI CACNNNNGTG 1 cut(s) 1310
PagI TCATGA 1 cut(s) 91
PciI ACATGT 1 cut(s) 1578
PcsI WCGNNNNNNNCGW 1 cut(s) 249
PctI GAATGC 1 cut(s) 1321
PdmI GAANNNNTTC 1 cut(s) 1657
PfoI TCCNGGA 1 cut(s) 188
PkrI GCNGC 6 cut(s) 224, 227, 1832, 1998, 2378, 2637
PleI GAGTC 5 cut(s) 470, 1068, 1572, 1860, 2337
PpsI GAGTC 5 cut(s) 470, 1068, 1572, 1860, 2337
PpuMI RGGWCCY 1 cut(s) 1001
PscI ACATGT 1 cut(s) 1578
PshAI GACNNNNGTC 1 cut(s) 1916
PsiI TTATAA 1 cut(s) 1131
Psp124BI GAGCTC 2 cut(s) 107, 2624
Psp1406I AACGTT 1 cut(s) 2795
Psp5II RGGWCCY 1 cut(s) 1001
Psp6I CCWGG 2 cut(s) 188, 1085
PspFI CCCAGC 1 cut(s) 1090
PspGI CCWGG 2 cut(s) 188, 1085
PspN4I GGNNCC 3 cut(s) 565, 936, 1801
PspPI GGNCC 8 cut(s) 358, 1001, 1073, 1589, 1693, 1918, 2522, 2537
PspPPI RGGWCCY 1 cut(s) 1001
PstI CTGCAG 1 cut(s) 1185
PstNI CAGNNNCTG 2 cut(s) 225, 355
PsuI RGATCY 4 cut(s) 563, 775, 1274, 2596
PvuII CAGCTG 3 cut(s) 222, 1310, 2476
RsaI GTAC 5 cut(s) 67, 1057, 1115, 1324, 1966
RsaNI GTAC 5 cut(s) 66, 1056, 1114, 1323, 1965
RseI CAYNNNNRTG 2 cut(s) 1310, 2807
SacI GAGCTC 2 cut(s) 107, 2624
SaqAI TTAA 7 cut(s) 504, 593, 801, 986, 1352, 2229, 2352
SatI GCNGC 6 cut(s) 223, 226, 1831, 1997, 2377, 2636
Sau96I GGNCC 8 cut(s) 358, 1001, 1073, 1589, 1693, 1918, 2522, 2537
ScaI AGTACT 3 cut(s) 67, 1324, 1966
SchI GAGTC 5 cut(s) 471, 1069, 1573, 1861, 2338
ScrFI CCNGG 3 cut(s) 190, 1087, 2583
SduI GDGCHC 5 cut(s) 107, 1475, 2403, 2624, 2703
SfaNI GCATC 5 cut(s) 155, 1407, 1893, 2178, 2699
SfcI CTRYAG 1 cut(s) 1181
SfuI TTCGAA 1 cut(s) 2010
SinI GGWCC 6 cut(s) 358, 1001, 1073, 1918, 2522, 2537
SmiMI CAYNNNNRTG 2 cut(s) 1310, 2807
SmlI CTYRAG 7 cut(s) 201, 1561, 1717, 1834, 1907, 2287, 2780
SmoI CTYRAG 7 cut(s) 201, 1561, 1717, 1834, 1907, 2287, 2780
SstI GAGCTC 2 cut(s) 107, 2624
StyD4I CCNGG 3 cut(s) 188, 1085, 2581
StyI CCWWGG 6 cut(s) 416, 654, 880, 1541, 1585, 1880
TaaI ACNGT 4 cut(s) 483, 897, 1327, 1335
TaiI ACGT 2 cut(s) 1368, 2798
TaqI TCGA 7 cut(s) 243, 432, 460, 828, 869, 1266, 2010
TatI WGTACW 3 cut(s) 65, 1322, 1964
TauI GCSGC 3 cut(s) 1999, 2379, 2638
Tru1I TTAA 7 cut(s) 504, 593, 801, 986, 1352, 2229, 2352
Tru9I TTAA 7 cut(s) 504, 593, 801, 986, 1352, 2229, 2352
TscAI CASTG 4 cut(s) 701, 1599, 1671, 1742
TseFI GTSAC 4 cut(s) 248, 495, 698, 2346
TseI GCWGC 3 cut(s) 222, 225, 1830
Tsp45I GTSAC 4 cut(s) 248, 495, 698, 2346
TspGWI ACGGA 3 cut(s) 323, 608, 2776
TspRI CASTG 4 cut(s) 701, 1599, 1671, 1742
VpaK11BI GGWCC 6 cut(s) 358, 1001, 1073, 1918, 2522, 2537
XbaI TCTAGA 1 cut(s) 973
XceI RCATGY 1 cut(s) 1582
XcmI CCANNNNNNNNNTGG 2 cut(s) 1083, 2233
XmiI GTMKAC 1 cut(s) 1063
XmnI GAANNNNTTC 1 cut(s) 1657
ZrmI AGTACT 3 cut(s) 67, 1324, 1966
Zsp2I ATGCAT 1 cut(s) 148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.