RchiOBHm_Chr5g0043361

Leucine rich repeat N-terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000024
Physical Location & Seq
Forward (+)
38317855 .. 38320854
3000 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32167

Sequence Viewer

Length: 3000 bp
ATGGGAATATTGCGGTGCAACATTTCGTTTCTGCATCTCTTTCCTCTTCTGTTACTCAATGTCTCCCACTTCTTGTCATTTGTGCAGACACTCTGCCACGTTGATGAGGGCTCTGCCTTGTTGCAATTCAAGGAAAGCTTCAGTATACACAAGTCTGCATCTGAAAATCCGTTTGCATACCCGAAGGTTGCGTCTTGGACAAGAAAAGAGGGAGAGAGGAGCAATTGCTGCTCTTGGGATGGTGTTGAGTGCAATGAGGAGACTGGCCATGTTATTGGCCTTGACCTCAGAAGCAGCTGTCTTTATGGTTCTGTCAACTCCAATAGCAGCCTTTTCCAAGTACTTGTGCACTTGCAGAAGCTTGATCTCTCGGATAATCACTTCAATTTCTCAGAAATACCATCAACATTAGGCCATCTTACGAGTCTTGCATATCTTAACCTTTCAAAGTCCTCATTTTCTGGTCCGATTCCATCCGAAATTTCGAAGTTATCTAAGCTCTCTGCCATTGATCTCTCTTTCAATTATGAACATTCCACTGATCAGTTGTTGAGACTACAAGAGGCCAACCAGCTGACAAGCCTGGTTCTACACTTAACCCACCTAAAACAACTTCATCTTAGCGGAGTTAACATACCCTTCACTGTGCCTGATGTCTTGGTCAATGCATCTTCTCTCACTTCTCTCCGCCTAGAAAACTGTGGGTTAATTGGAGAATTCCCTGTTGGCATCTTCCATCTACCAAACTTGCAGGTTCTTGATTTGGACACTAACCAAGACCTGGCAGGTCACTTTCCTGATTTCAACAGGAGTAGTCCCTTGGAGTATCTGAATGTTGCGAGGACAAATTTCTCTGGTGACTTACCTGCTTCAATCGGTAACCTCCGTTCCTTAAAATTCTTGAACATCGAGTATTGTGAGTTTGACTCTCACCTTCCATCTTCACTTGGCAATCTTACCCAGCTCAATTACCTTGATCTTTCATTTTTTTTCGACCGTAGTTTCACTCACTCAGACATTTCACCAAACAATTTTAGTCTCGTAGATTCCTGGTCTTGCATAGGAAAGCTTACCAAACTTCACCACTTGGGCCTTGGCCATACCTACTTGAAGGGAGAGTTTCCAACTTTTGTGGCTAACCTGACTCAACTAGAAGAGCTCAACTTGGGCAATAACAATATAACTGGTGAAATCCCATCATGGCTTACGAAGTTTACCAAATTAACTCTTCTAAACCTTCGGTTTAACAATTTGCAAGGAACAATTCCAAGGTCACTATTCTATCTTCATAATCTTGAACTTCTTGACCTTTCTTCAAATAACTTAATTGGATCAGTTGATTTTGATACGTTTTTCAACCTCAAAAAGTTAAGGGTGCTTAAATTATCATTCAACAAGTTATCTCTTCAGATGAAAAGTGGTTTGAGTGCTACTGCTCCAATGTTTGAAGTTCTGAAATTAGGTTCATGCAATTTGACCGAGTTTCCAGAATTTTTAAAGAATAGTAGTAGATTGGTTGATCTAGACCTATCTGACAACTATATTCAGGGCCAAATACCGAAATGGTTGTGGAGCTCAACTAGAGAAACCTTGTTGTGTCTTAACCTCTCTGGAAACTCTTTATCTGGATTTGACCAAAACCTTGTTGGTCTTCCATGGAGGAATCTCAAAGTTTTTGAGCTTGGGTTTAACAGGATACAAGGATCACTGCCAACTCCACCAGCAACAATCAAAATTTATTCTGTTCCAAACAATGTTTACAGTGGAGAAATGTCAGTATCATTTTGCAACTTGAGTTCTCTACTTATTCTTGATTTGTCCAACAACAACTTGAGTGGCCTGATTCCACAATGCTTGGGTAACTCCGATGCATTGGAGATATTGAACCTGCAGAATAACTCATTTCAGGGCCAAATTCCTCCAATGTGTACCAACGGAATTAGTTTTAAATCGGTCGACTTAAGTGAAAATATGTTGCAGGGCGAGCTACCAAAATCTATGGCCAATTGTACTCGGCTAGAGTTTCTTAATTTGGGAAAGAATCAGATTAGTGGCATCTTACCAACTTGGTTATGGGATCTTCCAGCTTTAAGGGTTCTCAGGTTGCGGTCCAATAGATTTTATGGCACAATTGTCGCGGCTCCAACAAACCTCGGGTCCTCAATACAGTTGTGCATCATTGACTTATCTCACAATTCTTTTTCAGGTACGCTGCCAATCCTGCCACACAACTATGAGGCATACTGGAATTGCCTCGAATCGGTTGGCGGAATTTATGAAGAGCCGACAATGTTCCAAGATACTTACAGAGTTGGTGCTGTAACGTATCATTATGATTACTCGATGTCAATATCTGGCATAGGTGTTGTGTTGAAACCTTTGAAGTACGCCGATTCTCCTTACTTCAAAGTCATAGATCTCTCAAGTAATAAATTTGAAGGACAGATTCCAACCACTGTGTACGAGCATCTGGTGGGGCTTCAATTGCTTAACCTCTCCAACAACATTCTCATTGGTAGTATCCCTTCATCTATAGGGAACTGGACTGGACTTGAATCATTGGATCTCTCCAATAATCATCTTTCAGGAGAGATACCCAGAAGTCTAGAACAACTCACTTCCCTTTCGACGTTTAATGTATCCCACAACCATCTAAGGGGGCCGATACCACATGAAAACCAATTTCTTACGTTTGTCGACAGCAATTCGTACGTAGGAAACCCAGCTTTGTGCGGATTTCCTTTGCAAGTGAAATGTGAAGATTCTGAGACTTCAAAGTCACCACCTCCAGGCCTTATTGAAGAAGATCACGAAGACCCTGATTATCCATTTGAATGGCGTTTATTCTTTCCTGCAGGACTTGTAAGTGGGTTGGTTGTTGGATTTGTTGCTGCGAACACTTTAACAACCAATAAGCAGCAATGGCTCGTAGAGAAATTTTGCAAGAGGAGGAGGCAGCCAAGACGCACAAAGGGGAGAAGGGCGCACATAAATTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8

Protein Analysis

999

Amino Acids

111.56

Weight (kDa)

5.92

Isoelectric Point (pI)

42.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 35 - 85 1.8e-07 Leucine rich repeat N-terminal domain
LRR_14 PF23598 249 - 327 3.1e-09 Leucine-rich repeat region
LRR_14 PF23598 351 - 538 8.1e-11 Leucine-rich repeat region
LRR_8 PF13855 359 - 418 3.4e-07 Leucine rich repeat
LRR_8 PF13855 407 - 467 1.5e-07 Leucine rich repeat
LRR_8 PF13855 650 - 707 2.1e-08 Leucine rich repeat
LRR_8 PF13855 843 - 885 1e-05 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2776
Acc36I ACCTGC 4 cut(s) 742, 776, 874, 1896
AccB7I CCANNNNNTGG 1 cut(s) 781
AccI GTMKAC 3 cut(s) 145, 1956, 2697
AccII CGCG 1 cut(s) 2138
AciI CCGC 7 cut(s) 13, 624, 688, 2107, 2138, 2268, 2733
AclWI GGATC 4 cut(s) 1339, 1711, 2085, 2571
AcoI YGGCCR 3 cut(s) 265, 1096, 2001
AcuI CTGAAG 2 cut(s) 124, 1391
AfaI GTAC 7 cut(s) 342, 1930, 2011, 2209, 2387, 2462, 2711
AfiI CCNNNNNNNGG 4 cut(s) 781, 2260, 2656, 2789
AflII CTTAAG 1 cut(s) 1960
AjnI CCWGG 4 cut(s) 582, 780, 1049, 2788
AjuI GAANNNNNNNTTGG 2 cut(s) 708, 740
Alw21I GWGCWC 3 cut(s) 351, 1161, 1577
Alw26I GTCTC 5 cut(s) 67, 254, 547, 1043, 2762
Alw44I GTGCAC 1 cut(s) 347
AlwI GGATC 4 cut(s) 1339, 1711, 2085, 2571
Ama87I CYCGRG 1 cut(s) 2153
ApaLI GTGCAC 1 cut(s) 347
ApeKI GCWGC 7 cut(s) 228, 294, 327, 2212, 2891, 2917, 2956
ArsI GACNNNNNNTTYG 4 cut(s) 176, 208, 2141, 2173
AspLEI GCGC 1 cut(s) 2986
AspS9I GGNCC 7 cut(s) 464, 1090, 1549, 1909, 2109, 2157, 2660
AsuHPI GGTGA 6 cut(s) 869, 923, 1014, 1073, 1199, 2772
AsuII TTCGAA 1 cut(s) 485
AvaI CYCGRG 1 cut(s) 2153
AvaII GGWCC 3 cut(s) 464, 2109, 2157
BaeGI GKGCMC 1 cut(s) 351
BalI TGGCCA 3 cut(s) 267, 1098, 2003
BanII GRGCYC 3 cut(s) 113, 1161, 1577
BarI GAAGNNNNNNTAC 2 cut(s) 2509, 2541
BbsI GAAGAC 2 cut(s) 1643, 2820
Bbv12I GWGCWC 3 cut(s) 351, 1161, 1577
BbvI GCAGC 7 cut(s) 215, 306, 339, 2199, 2878, 2929, 2968
BccI CCATC 8 cut(s) 233, 409, 423, 481, 744, 946, 1204, 2658
BcgI CGANNNNNNTGC 2 cut(s) 2116, 2150
BciT130I CCWGG 4 cut(s) 584, 782, 1051, 2790
BciVI GTATCC 3 cut(s) 1689, 2531, 2650
BclI TGATCA 1 cut(s) 541
BcoDI GTCTC 5 cut(s) 67, 254, 547, 1043, 2762
BfaI CTAG 6 cut(s) 692, 1151, 1523, 1581, 2018, 2606
BfmI CTRYAG 3 cut(s) 1889, 2532, 2853
BfrI CTTAAG 1 cut(s) 1960
BfuAI ACCTGC 4 cut(s) 742, 776, 874, 1896
BfuI GTATCC 3 cut(s) 1689, 2531, 2650
BglII AGATCT 1 cut(s) 2416
BisI GCNGC 8 cut(s) 229, 295, 328, 2139, 2213, 2892, 2918, 2957
BlsI GCNGC 8 cut(s) 230, 296, 329, 2140, 2214, 2893, 2919, 2958
BmcAI AGTACT 1 cut(s) 342
Bme1390I CCNGG 4 cut(s) 584, 782, 1051, 2790
Bme18I GGWCC 3 cut(s) 464, 2109, 2157
BmeT110I CYCGRG 1 cut(s) 2153
BmgT120I GGNCC 7 cut(s) 464, 1090, 1549, 1909, 2109, 2157, 2660
BmiI GGNNCC 3 cut(s) 2142, 2158, 2661
BmrFI CCNGG 4 cut(s) 584, 782, 1051, 2790
BmsI GCATC 8 cut(s) 43, 167, 677, 738, 1858, 2064, 2184, 2476
BpiI GAAGAC 2 cut(s) 1643, 2820
BplI GAGNNNNNCTC 2 cut(s) 911, 943
BpmI CTGGAG 1 cut(s) 2772
Bpu14I TTCGAA 1 cut(s) 485
BpuEI CTTGAG 3 cut(s) 1813, 1852, 2407
BsaAI YACGTR 1 cut(s) 2713
BsaJI CCNNGG 5 cut(s) 819, 1093, 1268, 1655, 2152
Bsc4I CCNNNNNNNGG 4 cut(s) 781, 2260, 2656, 2789
Bse1I ACTGG 5 cut(s) 268, 1189, 2249, 2546, 2551
Bse3DI GCAATG 2 cut(s) 259, 2927
BseBI CCWGG 4 cut(s) 584, 782, 1051, 2790
BseDI CCNNGG 5 cut(s) 819, 1093, 1268, 1655, 2152
BseGI GGATG 2 cut(s) 244, 473
BseLI CCNNNNNNNGG 4 cut(s) 781, 2260, 2656, 2789
BseMI GCAATG 2 cut(s) 259, 2927
BseMII CTCAG 5 cut(s) 301, 405, 1026, 2113, 2757
BseNI ACTGG 5 cut(s) 268, 1189, 2249, 2546, 2551
BseRI GAGGAG 4 cut(s) 232, 272, 2962, 2965
BseSI GKGCMC 1 cut(s) 351
BseXI GCAGC 7 cut(s) 215, 306, 339, 2199, 2878, 2929, 2968
BseYI CCCAGC 2 cut(s) 960, 2722
BsgI GTGCAG 1 cut(s) 104
Bsh1236I CGCG 1 cut(s) 2138
Bsh1285I CGRYCG 2 cut(s) 997, 1956
BsiEI CGRYCG 2 cut(s) 997, 1956
BsiHKAI GWGCWC 3 cut(s) 351, 1161, 1577
BsiHKCI CYCGRG 1 cut(s) 2153
BsiWI CGTACG 1 cut(s) 2709
BslFI GGGAC 1 cut(s) 801
BslI CCNNNNNNNGG 4 cut(s) 781, 2260, 2656, 2789
BsmAI GTCTC 5 cut(s) 67, 254, 547, 1043, 2762
BsmFI GGGAC 1 cut(s) 801
BsoBI CYCGRG 1 cut(s) 2153
Bsp119I TTCGAA 1 cut(s) 485
Bsp1286I GDGCHC 4 cut(s) 113, 351, 1161, 1577
Bsp19I CCATGG 1 cut(s) 1655
BspACI CCGC 7 cut(s) 13, 624, 688, 2107, 2138, 2268, 2733
BspCNI CTCAG 5 cut(s) 300, 404, 1025, 2112, 2758
BspFNI CGCG 1 cut(s) 2138
BspLI GGNNCC 3 cut(s) 2142, 2158, 2661
BspMAI CTGCAG 2 cut(s) 1893, 2857
BspMI ACCTGC 4 cut(s) 742, 776, 874, 1896
BspPI GGATC 4 cut(s) 1339, 1711, 2085, 2571
BspQI GCTCTTC 2 cut(s) 1149, 2274
BspT104I TTCGAA 1 cut(s) 485
BspTI CTTAAG 1 cut(s) 1960
BsrDI GCAATG 2 cut(s) 259, 2927
BsrI ACTGG 5 cut(s) 268, 1189, 2249, 2546, 2551
BssECI CCNNGG 5 cut(s) 819, 1093, 1268, 1655, 2152
BssNAI GTATAC 1 cut(s) 146
BssT1I CCWWGG 4 cut(s) 819, 1093, 1268, 1655
Bst1107I GTATAC 1 cut(s) 146
Bst2UI CCWGG 4 cut(s) 584, 782, 1051, 2790
Bst4CI ACNGT 6 cut(s) 646, 701, 998, 1763, 2169, 2458
Bst6I CTCTTC 5 cut(s) 51, 1149, 1233, 1410, 2274
BstAFI CTTAAG 1 cut(s) 1960
BstAPI GCANNNNNTGC 1 cut(s) 228
BstBAI YACGTR 1 cut(s) 2713
BstBI TTCGAA 1 cut(s) 485
BstC8I GCNNGC 1 cut(s) 1985
BstDEI CTNAG 8 cut(s) 287, 391, 495, 620, 1012, 2099, 2654, 2766
BstDSI CCRYGG 1 cut(s) 1655
BstEII GGTNACC 1 cut(s) 878
BstF5I GGATG 2 cut(s) 244, 473
BstFNI CGCG 1 cut(s) 2138
BstHHI GCGC 1 cut(s) 2986
BstMAI GTCTC 5 cut(s) 67, 254, 547, 1043, 2762
BstMCI CGRYCG 2 cut(s) 997, 1956
BstMWI GCNNNNNNNGC 5 cut(s) 228, 1984, 2221, 2485, 2923
BstNI CCWGG 4 cut(s) 584, 782, 1051, 2790
BstPI GGTNACC 1 cut(s) 878
BstSCI CCNGG 4 cut(s) 582, 780, 1049, 2788
BstSFI CTRYAG 3 cut(s) 1889, 2532, 2853
BstSLI GKGCMC 1 cut(s) 351
BstSNI TACGTA 1 cut(s) 2713
BstUI CGCG 1 cut(s) 2138
BstV1I GCAGC 7 cut(s) 215, 306, 339, 2199, 2878, 2929, 2968
BstV2I GAAGAC 2 cut(s) 1643, 2820
BstX2I RGATCY 3 cut(s) 2077, 2416, 2563
BstXI CCANNNNNNTGG 2 cut(s) 275, 2835
BstYI RGATCY 3 cut(s) 2077, 2416, 2563
BstZ17I GTATAC 1 cut(s) 146
BsuI GTATCC 3 cut(s) 1689, 2531, 2650
BtgI CCRYGG 1 cut(s) 1655
BtsCI GGATG 2 cut(s) 244, 473
BtsI GCAGTG 1 cut(s) 1706
BtsIMutI CAGTG 5 cut(s) 537, 642, 1706, 1768, 2454
BveI ACCTGC 4 cut(s) 742, 776, 874, 1896
Cac8I GCNNGC 1 cut(s) 1985
CfoI GCGC 1 cut(s) 2986
Cfr13I GGNCC 7 cut(s) 464, 1090, 1549, 1909, 2109, 2157, 2660
CseI GACGC 2 cut(s) 180, 2973
Csp6I GTAC 7 cut(s) 341, 1929, 2010, 2208, 2386, 2461, 2710
CspCI CAANNNNNGTGG 6 cut(s) 1113, 1148, 1816, 1836, 1851, 1871
CviAII CATG 5 cut(s) 269, 1200, 1467, 1656, 2672
CviQI GTAC 7 cut(s) 341, 1929, 2010, 2208, 2386, 2461, 2710
DdeI CTNAG 8 cut(s) 287, 391, 495, 620, 1012, 2099, 2654, 2766
DraI TTTAAA 2 cut(s) 1497, 1948
DrdI GACNNNNNNGTC 1 cut(s) 2776
DseDI GACNNNNNNGTC 1 cut(s) 2776
EaeI YGGCCR 3 cut(s) 265, 1096, 2001
Eam1104I CTCTTC 5 cut(s) 51, 1149, 1233, 1410, 2274
EarI CTCTTC 5 cut(s) 51, 1149, 1233, 1410, 2274
EciI GGCGGA 2 cut(s) 677, 2283
Ecl136II GAGCTC 2 cut(s) 1159, 1575
Eco105I TACGTA 1 cut(s) 2713
Eco130I CCWWGG 4 cut(s) 819, 1093, 1268, 1655
Eco147I AGGCCT 1 cut(s) 2793
Eco24I GRGCYC 3 cut(s) 113, 1161, 1577
Eco47I GGWCC 3 cut(s) 464, 2109, 2157
Eco53kI GAGCTC 2 cut(s) 1159, 1575
Eco57I CTGAAG 2 cut(s) 124, 1391
Eco88I CYCGRG 1 cut(s) 2153
Eco91I GGTNACC 1 cut(s) 878
EcoICRI GAGCTC 2 cut(s) 1159, 1575
EcoO109I RGGNCCY 1 cut(s) 2157
EcoO65I GGTNACC 1 cut(s) 878
EcoRI GAATTC 1 cut(s) 716
EcoRII CCWGG 4 cut(s) 582, 780, 1049, 2788
EcoT14I CCWWGG 4 cut(s) 819, 1093, 1268, 1655
EcoT22I ATGCAT 2 cut(s) 670, 1873
EcoT38I GRGCYC 3 cut(s) 113, 1161, 1577
ErhI CCWWGG 4 cut(s) 819, 1093, 1268, 1655
FaeI CATG 5 cut(s) 272, 1203, 1470, 1659, 2675
FalI AAGNNNNNCTT 2 cut(s) 122, 154
FaqI GGGAC 1 cut(s) 801
FatI CATG 5 cut(s) 268, 1199, 1466, 1655, 2671
FbaI TGATCA 1 cut(s) 541
FblI GTMKAC 3 cut(s) 145, 1956, 2697
Fnu4HI GCNGC 8 cut(s) 229, 295, 328, 2139, 2213, 2892, 2918, 2957
FokI GGATG 2 cut(s) 251, 460
FriOI GRGCYC 3 cut(s) 113, 1161, 1577
Fsp4HI GCNGC 8 cut(s) 229, 295, 328, 2139, 2213, 2892, 2918, 2957
FspBI CTAG 6 cut(s) 692, 1151, 1523, 1581, 2018, 2606
GlaI GCGC 1 cut(s) 2985
GluI GCNGC 8 cut(s) 229, 295, 328, 2139, 2213, 2892, 2918, 2957
GsaI CCCAGC 2 cut(s) 964, 2726
GsuI CTGGAG 1 cut(s) 2772
HgaI GACGC 2 cut(s) 180, 2973
HhaI GCGC 1 cut(s) 2986
Hin1II CATG 5 cut(s) 272, 1203, 1470, 1659, 2675
Hin6I GCGC 1 cut(s) 2984
HinP1I GCGC 1 cut(s) 2984
HincII GTYRAC 4 cut(s) 316, 631, 1957, 2698
HindII GTYRAC 4 cut(s) 316, 631, 1957, 2698
HindIII AAGCTT 3 cut(s) 136, 359, 1067
HpaI GTTAAC 1 cut(s) 631
HphI GGTGA 6 cut(s) 869, 923, 1014, 1073, 1199, 2772
Hpy99I CGWCG 1 cut(s) 2632
HpyAV CCTTC 8 cut(s) 178, 649, 944, 1105, 1247, 2432, 2535, 2973
HpyCH4III ACNGT 6 cut(s) 646, 701, 998, 1763, 2169, 2458
HpyCH4IV ACGT 6 cut(s) 99, 1349, 2324, 2630, 2690, 2712
HpyF10VI GCNNNNNNNGC 5 cut(s) 228, 1984, 2221, 2485, 2923
HpyF3I CTNAG 8 cut(s) 287, 391, 495, 620, 1012, 2099, 2654, 2766
HpySE526I ACGT 6 cut(s) 99, 1349, 2324, 2630, 2690, 2712
Hsp92II CATG 5 cut(s) 272, 1203, 1470, 1659, 2675
HspAI GCGC 1 cut(s) 2984
Ksp22I TGATCA 1 cut(s) 541
KspAI GTTAAC 1 cut(s) 631
LguI GCTCTTC 2 cut(s) 1149, 2274
LmnI GCTCC 4 cut(s) 219, 1441, 1572, 2146
Lsp1109I GCAGC 7 cut(s) 215, 306, 339, 2199, 2878, 2929, 2968
LweI GCATC 8 cut(s) 43, 167, 677, 738, 1858, 2064, 2184, 2476
MaeI CTAG 6 cut(s) 692, 1151, 1523, 1581, 2018, 2606
MaeII ACGT 6 cut(s) 99, 1349, 2324, 2630, 2690, 2712
MaeIII GTNAC 8 cut(s) 51, 788, 857, 878, 1272, 1859, 2320, 2778
MfeI CAATTG 4 cut(s) 223, 2005, 2130, 2483
MflI RGATCY 3 cut(s) 2077, 2416, 2563
MhlI GDGCHC 4 cut(s) 113, 351, 1161, 1577
MlsI TGGCCA 3 cut(s) 267, 1098, 2003
MluNI TGGCCA 3 cut(s) 267, 1098, 2003
MlyI GAGTC 3 cut(s) 433, 920, 1138
MmeI TCCRAC 6 cut(s) 1148, 1845, 2168, 2474, 2523, 2860
Mox20I TGGCCA 3 cut(s) 267, 1098, 2003
Mph1103I ATGCAT 2 cut(s) 670, 1873
MscI TGGCCA 3 cut(s) 267, 1098, 2003
MslI CAYNNNNRTG 3 cut(s) 102, 2232, 2833
Msp20I TGGCCA 3 cut(s) 267, 1098, 2003
MspA1I CMGCKG 2 cut(s) 297, 574
MspCI CTTAAG 1 cut(s) 1960
MspR9I CCNGG 4 cut(s) 584, 782, 1051, 2790
MunI CAATTG 4 cut(s) 223, 2005, 2130, 2483
MvaI CCWGG 4 cut(s) 584, 782, 1051, 2790
MvnI CGCG 1 cut(s) 2138
MwoI GCNNNNNNNGC 5 cut(s) 228, 1984, 2221, 2485, 2923
NcoI CCATGG 1 cut(s) 1655
NlaIII CATG 5 cut(s) 272, 1203, 1470, 1659, 2675
NlaIV GGNNCC 3 cut(s) 2142, 2158, 2661
NmeAIII GCCGAG 1 cut(s) 1993
NmuCI GTSAC 4 cut(s) 788, 857, 1272, 2778
NsiI ATGCAT 2 cut(s) 670, 1873
NspV TTCGAA 1 cut(s) 485
PceI AGGCCT 1 cut(s) 2793
PciSI GCTCTTC 2 cut(s) 1149, 2274
Pfl23II CGTACG 1 cut(s) 2709
PflMI CCANNNNNTGG 1 cut(s) 781
PkrI GCNGC 8 cut(s) 230, 296, 329, 2140, 2214, 2893, 2919, 2958
PleI GAGTC 3 cut(s) 432, 920, 1138
PpsI GAGTC 3 cut(s) 432, 920, 1138
Ppu21I YACGTR 1 cut(s) 2713
PpuMI RGGWCCY 1 cut(s) 2157
Psp124BI GAGCTC 2 cut(s) 1161, 1577
Psp5II RGGWCCY 1 cut(s) 2157
Psp6I CCWGG 4 cut(s) 582, 780, 1049, 2788
PspEI GGTNACC 1 cut(s) 878
PspFI CCCAGC 2 cut(s) 960, 2722
PspGI CCWGG 4 cut(s) 582, 780, 1049, 2788
PspLI CGTACG 1 cut(s) 2709
PspN4I GGNNCC 3 cut(s) 2142, 2158, 2661
PspPI GGNCC 7 cut(s) 464, 1090, 1549, 1909, 2109, 2157, 2660
PspPPI RGGWCCY 1 cut(s) 2157
PsrI GAACNNNNNNTAC 2 cut(s) 871, 903
PstI CTGCAG 2 cut(s) 1893, 2857
PsuI RGATCY 3 cut(s) 2077, 2416, 2563
PvuII CAGCTG 2 cut(s) 297, 574
RsaI GTAC 7 cut(s) 342, 1930, 2011, 2209, 2387, 2462, 2711
RsaNI GTAC 7 cut(s) 341, 1929, 2010, 2208, 2386, 2461, 2710
RseI CAYNNNNRTG 3 cut(s) 102, 2232, 2833
SacI GAGCTC 2 cut(s) 1161, 1577
SalI GTCGAC 2 cut(s) 1955, 2696
SapI GCTCTTC 2 cut(s) 1149, 2274
SatI GCNGC 8 cut(s) 229, 295, 328, 2139, 2213, 2892, 2918, 2957
Sau96I GGNCC 7 cut(s) 464, 1090, 1549, 1909, 2109, 2157, 2660
SbfI CCTGCAGG 1 cut(s) 2857
ScaI AGTACT 1 cut(s) 342
SchI GAGTC 3 cut(s) 433, 920, 1138
ScrFI CCNGG 4 cut(s) 584, 782, 1051, 2790
SdaI CCTGCAGG 1 cut(s) 2857
SduI GDGCHC 4 cut(s) 113, 351, 1161, 1577
SfaNI GCATC 8 cut(s) 43, 167, 677, 738, 1858, 2064, 2184, 2476
SfcI CTRYAG 3 cut(s) 1889, 2532, 2853
SfuI TTCGAA 1 cut(s) 485
SinI GGWCC 3 cut(s) 464, 2109, 2157
SmiMI CAYNNNNRTG 3 cut(s) 102, 2232, 2833
SmlI CTYRAG 4 cut(s) 1792, 1831, 1960, 2422
SmoI CTYRAG 4 cut(s) 1792, 1831, 1960, 2422
SnaBI TACGTA 1 cut(s) 2713
Sse8387I CCTGCAGG 1 cut(s) 2857
SseBI AGGCCT 1 cut(s) 2793
SsiI CCGC 7 cut(s) 13, 624, 688, 2107, 2138, 2268, 2733
SspI AATATT 1 cut(s) 9
SspMI CTAG 6 cut(s) 692, 1151, 1523, 1581, 2018, 2606
SstI GAGCTC 2 cut(s) 1161, 1577
StuI AGGCCT 1 cut(s) 2793
StyD4I CCNGG 4 cut(s) 582, 780, 1049, 2788
StyI CCWWGG 4 cut(s) 819, 1093, 1268, 1655
TaaI ACNGT 6 cut(s) 646, 701, 998, 1763, 2169, 2458
TaiI ACGT 6 cut(s) 102, 1352, 2327, 2633, 2693, 2715
TaqI TCGA 8 cut(s) 485, 909, 993, 1956, 2256, 2342, 2627, 2697
TaqII GACCGA 2 cut(s) 1493, 1942
TatI WGTACW 2 cut(s) 340, 2009
TauI GCSGC 1 cut(s) 2141
TscAI CASTG 5 cut(s) 544, 649, 1713, 1768, 2461
TseFI GTSAC 4 cut(s) 788, 857, 1272, 2778
TseI GCWGC 7 cut(s) 228, 294, 327, 2212, 2891, 2917, 2956
Tsp45I GTSAC 4 cut(s) 788, 857, 1272, 2778
TspDTI ATGAA 9 cut(s) 543, 605, 972, 1277, 1427, 1455, 2292, 2517, 2688
TspGWI ACGGA 3 cut(s) 159, 875, 1950
TspRI CASTG 5 cut(s) 544, 649, 1713, 1768, 2461
Van91I CCANNNNNTGG 1 cut(s) 781
Vha464I CTTAAG 1 cut(s) 1960
VneI GTGCAC 1 cut(s) 347
VpaK11BI GGWCC 3 cut(s) 464, 2109, 2157
XbaI TCTAGA 2 cut(s) 1522, 2605
XcmI CCANNNNNNNNNTGG 3 cut(s) 1091, 1643, 2070
XmiI GTMKAC 3 cut(s) 145, 1956, 2697
XspI CTAG 6 cut(s) 692, 1151, 1523, 1581, 2018, 2606
ZrmI AGTACT 1 cut(s) 342
Zsp2I ATGCAT 2 cut(s) 670, 1873
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.