RchiOBHm_Chr1g0344431

Receptor-like protein 12

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
36769526 .. 36772556
3031 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57088

Sequence Viewer

Length: 2571 bp
ATGATGGGGTTATCCCATTGCTTGTTACTATTTTTCATCTTTTTCTTCAAGGGGTGCAATACCAGTACTGCCCATGAGCTATCTTATTGTCATGATGAGGAGAGCTCTGCCTTGCTACAATTCAAGCAAACCTTTACCATCAATGCATCTGCTTCGGGTTTAGAGGGTGCTTATCCGAAAGTGTTGTCCTGGAAACAAGCTCAAGGAGGAAACAACACCAACTGCTGCACATGGGATGGGGTCGAGTGTGACGAACACACGGGTCATGTGATCGGGCTTGATCTCAGAAGCAGTTGTCTCTACGGCTCTATTCACTCCAACAGCTCCCTCTTCCGTCTTGTTCACCTTCAGAGGCTGAACCTTGCCGATAATCACTTCAATTACTCTCAAATTCCTACTAGCATTAGAAATTTTCCAAGGCTTACCCATCTTGACCTCTCTCGCTCTGTATTTTCTGGTCGAGTCCCTTCGGAAGTTTCACAGTTGCTAGAATTTTCCAGTTACAAAACTTGCAAAATCTCTATCTCAGAGATCTTGGTCAGAGACAACCAAGATCTCATTGGTTATTTGCCTGAATTTAATAAAAGTAGTCCTCTCATAACTCTCGATGTCCATGGAACTAGATTTTCAGGGAACTTAGCCTTTTCTATCAGAAATCTTGGTTCTTTGAAACAGTTGGATGTGGCTGCCTGCAATTTTTCAGCAGGCTTGGTTCCATCTTCGCTGGGTAATCTCAGAGAGCTGACTTATCTAGACATTTCAGCAAACCAATTTGGAGGTCCTGTTCCAGATTCTTTTGCAAACCTTACAAAATTGTCTGTTTTTAGGATCAGTACGAGTCTACTAACTGGTCCAATCCCATCTTGGCTGGGTAACTTTAGCGAACTAGAGTACCTAGACTTTGGTTATAACAGATTGGGTGGTTCAATTCCTGCATCATTTTCCAATCTCACTAATCTCCAGATTCTTTATCTTCAGTCCAATAACCTGAGCGGTATAGTGGAGTTTCAAAAATTTCAAAACCTACAAAATCTCAAGCAACTCGATCTAAGTAATAATCCTCTGGAATTTTTCTCTGAATCCACAGCTATGAATGCAACTATGCAATTCCCATATTTCTTGAGATATCAAAAACATTTGGAGCGGTTGATGCTTGGTGGAAACAAAATCCATGGTCAAGTACCGAAATGGATGTGGAACATGAGCACAGAATCCTTGATTCAGCTAGACATTTCTTATAATTTCCTGTCAGGCCAACTTCCTGTTTTCTTTCCTTGGGTCAACCAACTACACTTGACTCTTGCTTCCAACATGTTCCATGGGCCACTGCCGATACCTGCATCATCCACTTTAGTCTATGAAGCTCATACCAACAAATTTACTGGAAAACTTTCACCAGTGATCTGTAATATGAGTTCTCTTCTAGCCCTTGAATTGTCCAATAACAACTTGAGTGGCATGATTCCGCAGTGTTTCGGAAACTTCAGTGATCCATTGAAACTTTTAGTTCTTGGAAATAACTCGTTTCATGGCACACTACCGCAAACATTCACCAACAAAAGCAACTTGAGGAGATTTGATGTGAGTTTTAATCAATTGCAAGGCCAACTGCCAAGGTCATTGGCGAATTGTCTGATGCTTGAGACTTTGATCCTGTCAAACAATTACTTCAATGATGTCTTTCCCTCTTGGATGGTTACTCTACCTGAGTTGAAAGTTTTGGCAATGCGGCATAATGCGTTCCAAGGATTGATAGGAAAGCCCGAAAACAATCAGCAGTTCCCAAAGTTGCGTATTTTAGATATTTCTTACAATAACTTCAGTGGCAAGTTTGTAGCTGAATACATCTTCTCCGAGTATGCCATGAGATCAGTCAACCAGTCGACCTACTTGACGGTTGACGTCAATTTCATTACCTATCTTAGTTATGCTTCCACATTTACAATAACCATTAAAGATGGGGATAGATACTATATAAGGATTTATGAAGCTTTTGCAGTCATTGATATCTCAAGCAACAAATTTGAAGGGAAGGTTGATGAATCCATTGGGAGTCTAAAAGGGCTTTGGTCACTTAATTTTTCCAATAATCTTCTCAGTGGTCGTATCCCGTCATCGTTTGGGAACTCGACGAATCTTGAAGTACTAGACCTTTCCAATAACAAGCTCTCAGGAGAGATTCCCAAACAATTGGCACAGCTGACATTCCTTGCAGAATTCAACGTCTCTCACAACAATCTCACAGGTCCAATACCGCGTGGACCGCAACTGAATACCTTCTCCATCAATTCATACAAGGGAAATCCTGGATTGTGCGGAGATCCTTTGCCAAAGATATGTCAGAGCTCTAAGGCCCCACCGCAACTGCCACCTTCAAACACAGAAGAAAATGATTCTGGAGGTGAATTTGAATGGGCTTTTGTGCTCGCTGGATACGGAAGTGGGTTCGTGGTGGGAGTTGTGCTTGCGGACTTGGCCATTACACGGAGGCGCGAGTTCTTTCTGGAGATAGTTGGAACGTTGATCAGACTAATGGAAAGGATCACAAGCTGGAAGGGGTTTGGACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

856

Amino Acids

95.6

Weight (kDa)

6.66

Isoelectric Point (pI)

35.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 84 6e-07 Leucine rich repeat N-terminal domain
LRR_14 PF23598 202 - 415 2.4e-15 Leucine-rich repeat region
LRR_8 PF13855 271 - 330 1.1e-07 Leucine rich repeat
LRR_4 PF12799 295 - 330 8.4e-06 Leucine Rich repeats (2 copies)
LRR_4 PF12799 318 - 356 9.9e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 547 - 607 4.3e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 909, 1239
AatII GACGTC 1 cut(s) 1905
Acc36I ACCTGC 1 cut(s) 1345
AccBSI CCGCTC 2 cut(s) 993, 1144
AccI GTMKAC 2 cut(s) 841, 1883
AccII CGCG 2 cut(s) 2257, 2493
AclI AACGTT 1 cut(s) 2519
AclWI GGATC 5 cut(s) 836, 1484, 1645, 2315, 2549
AcoI YGGCCR 1 cut(s) 2475
AcuI CTGAAG 4 cut(s) 332, 959, 1468, 1804
AcyI GRCGYC 1 cut(s) 1902
AfaI GTAC 5 cut(s) 67, 835, 893, 1182, 2145
AfiI CCNNNNNNNGG 1 cut(s) 2484
AflIII ACRYGT 1 cut(s) 1311
AjnI CCWGG 2 cut(s) 188, 2305
AloI GAACNNNNNNTCC 2 cut(s) 768, 800
Alw21I GWGCWC 4 cut(s) 107, 1208, 2348, 2427
Alw26I GTCTC 4 cut(s) 302, 537, 1637, 2230
AlwI GGATC 5 cut(s) 836, 1484, 1645, 2315, 2549
AlwNI CAGNNNCTG 1 cut(s) 355
AoxI GGCC 5 cut(s) 1252, 1322, 1603, 2352, 2475
ApeKI GCWGC 2 cut(s) 225, 686
ArsI GACNNNNNNTTYG 2 cut(s) 170, 202
Asp700I GAANNNNTTC 2 cut(s) 1390, 2276
AspLEI GCGC 1 cut(s) 2493
AspS9I GGNCC 6 cut(s) 779, 851, 1322, 2246, 2261, 2353
AsuHPI GGTGA 4 cut(s) 335, 1386, 1543, 2414
AvaII GGWCC 4 cut(s) 779, 851, 2246, 2261
BaeI ACNNNNGTAYC 4 cut(s) 875, 908, 2425, 2458
BalI TGGCCA 1 cut(s) 2477
BanII GRGCYC 2 cut(s) 107, 2348
Bbv12I GWGCWC 4 cut(s) 107, 1208, 2348, 2427
BbvI GCAGC 2 cut(s) 212, 673
BccI CCATC 8 cut(s) 146, 230, 435, 724, 868, 1687, 1952, 2291
BceAI ACGGC 1 cut(s) 319
BcgI CGANNNNNNTGC 2 cut(s) 135, 169
BciT130I CCWGG 2 cut(s) 190, 2307
BciVI GTATCC 2 cut(s) 2117, 2426
BclI TGATCA 1 cut(s) 2523
BcoDI GTCTC 4 cut(s) 302, 537, 1637, 2230
BfaI CTAG 9 cut(s) 399, 488, 621, 752, 887, 896, 1226, 1424, 2147
BfuAI ACCTGC 1 cut(s) 1345
BfuI GTATCC 2 cut(s) 2117, 2426
BglII AGATCT 2 cut(s) 531, 553
BisI GCNGC 3 cut(s) 226, 687, 1730
BlsI GCNGC 3 cut(s) 227, 688, 1731
BmcAI AGTACT 2 cut(s) 67, 2145
Bme1390I CCNGG 2 cut(s) 190, 2307
Bme18I GGWCC 4 cut(s) 779, 851, 2246, 2261
BmgT120I GGNCC 6 cut(s) 779, 851, 1322, 2246, 2261, 2353
BmiI GGNNCC 2 cut(s) 714, 2355
BmrFI CCNGG 2 cut(s) 190, 2307
BmsI GCATC 5 cut(s) 155, 944, 1140, 1349, 1626
BplI GAGNNNNNCTC 2 cut(s) 89, 121
BpmI CTGGAG 3 cut(s) 944, 2418, 2525
Bpu10I CCTNAGC 1 cut(s) 989
BpuEI CTTGAG 7 cut(s) 186, 1019, 1141, 1471, 1588, 1661, 1996
BsaHI GRCGYC 1 cut(s) 1902
BsaJI CCNNGG 7 cut(s) 416, 613, 1171, 1274, 1318, 1613, 1744
BsaXI ACNNNNNCTCC 4 cut(s) 768, 798, 1835, 1865
Bsc4I CCNNNNNNNGG 1 cut(s) 2484
Bse1I ACTGG 6 cut(s) 63, 498, 853, 1387, 1397, 1879
Bse3DI GCAATG 2 cut(s) 16, 1731
BseBI CCWGG 2 cut(s) 190, 2307
BseDI CCNNGG 7 cut(s) 416, 613, 1171, 1274, 1318, 1613, 1744
BseGI GGATG 5 cut(s) 241, 685, 1197, 1343, 1698
BseLI CCNNNNNNNGG 1 cut(s) 2484
BseMI GCAATG 2 cut(s) 16, 1731
BseMII CTCAG 7 cut(s) 298, 540, 748, 980, 1698, 2110, 2184
BseNI ACTGG 6 cut(s) 63, 498, 853, 1387, 1397, 1879
BseRI GAGGAG 2 cut(s) 113, 1585
BseXI GCAGC 2 cut(s) 212, 673
BseYI CCCAGC 2 cut(s) 724, 868
BsgI GTGCAG 1 cut(s) 211
Bsh1236I CGCG 2 cut(s) 2257, 2493
BshFI GGCC 5 cut(s) 1254, 1324, 1605, 2354, 2477
BsiHKAI GWGCWC 4 cut(s) 107, 1208, 2348, 2427
BslFI GGGAC 1 cut(s) 449
BslI CCNNNNNNNGG 1 cut(s) 2484
BsmAI GTCTC 4 cut(s) 302, 537, 1637, 2230
BsmBI CGTCTC 1 cut(s) 2230
BsmFI GGGAC 1 cut(s) 449
BsmI GAATGC 1 cut(s) 1099
BsnI GGCC 5 cut(s) 1254, 1324, 1605, 2354, 2477
Bsp1286I GDGCHC 4 cut(s) 107, 1208, 2348, 2427
Bsp19I CCATGG 3 cut(s) 613, 1171, 1318
BspANI GGCC 5 cut(s) 1254, 1324, 1605, 2354, 2477
BspCNI CTCAG 7 cut(s) 297, 539, 747, 981, 1699, 2109, 2183
BspFNI CGCG 2 cut(s) 2257, 2493
BspHI TCATGA 1 cut(s) 91
BspLI GGNNCC 2 cut(s) 714, 2355
BspMI ACCTGC 1 cut(s) 1345
BspPI GGATC 5 cut(s) 836, 1484, 1645, 2315, 2549
BsrBI CCGCTC 2 cut(s) 993, 1144
BsrDI GCAATG 2 cut(s) 16, 1731
BsrI ACTGG 6 cut(s) 63, 498, 853, 1387, 1397, 1879
BssECI CCNNGG 7 cut(s) 416, 613, 1171, 1274, 1318, 1613, 1744
BssNI GRCGYC 1 cut(s) 1902
BssT1I CCWWGG 7 cut(s) 416, 613, 1171, 1274, 1318, 1613, 1744
Bst2UI CCWGG 2 cut(s) 190, 2307
Bst4CI ACNGT 3 cut(s) 483, 675, 1897
Bst6I CTCTTC 2 cut(s) 335, 1425
BstACI GRCGYC 1 cut(s) 1902
BstC8I GCNNGC 4 cut(s) 691, 706, 2427, 2466
BstDSI CCRYGG 3 cut(s) 613, 1171, 1318
BstF5I GGATG 5 cut(s) 241, 685, 1197, 1343, 1698
BstFNI CGCG 2 cut(s) 2257, 2493
BstHHI GCGC 1 cut(s) 2493
BstMAI GTCTC 4 cut(s) 302, 537, 1637, 2230
BstMWI GCNNNNNNNGC 4 cut(s) 1094, 1150, 2263, 2474
BstNI CCWGG 2 cut(s) 190, 2307
BstNSI RCATGY 1 cut(s) 1315
BstSCI CCNGG 2 cut(s) 188, 2305
BstUI CGCG 2 cut(s) 2257, 2493
BstV1I GCAGC 2 cut(s) 212, 673
BstX2I RGATCY 3 cut(s) 531, 553, 2320
BstXI CCANNNNNNTGG 1 cut(s) 2191
BstYI RGATCY 3 cut(s) 531, 553, 2320
BsuI GTATCC 2 cut(s) 2117, 2426
BsuRI GGCC 5 cut(s) 1254, 1324, 1605, 2354, 2477
BtgI CCRYGG 3 cut(s) 613, 1171, 1318
BtsCI GGATG 5 cut(s) 241, 685, 1197, 1343, 1698
BtsI GCAGTG 2 cut(s) 1325, 1475
BtsIMutI CAGTG 6 cut(s) 1325, 1404, 1475, 1492, 1828, 2104
BveI ACCTGC 1 cut(s) 1345
Cac8I GCNNGC 4 cut(s) 691, 706, 2427, 2466
CaiI CAGNNNCTG 1 cut(s) 355
CciI TCATGA 1 cut(s) 91
CfoI GCGC 1 cut(s) 2493
Cfr13I GGNCC 6 cut(s) 779, 851, 1322, 2246, 2261, 2353
Csp6I GTAC 5 cut(s) 66, 834, 892, 1181, 2144
CspCI CAANNNNNGTGG 2 cut(s) 1435, 1470
CviQI GTAC 5 cut(s) 66, 834, 892, 1181, 2144
EaeI YGGCCR 1 cut(s) 2475
Eam1104I CTCTTC 2 cut(s) 335, 1425
EarI CTCTTC 2 cut(s) 335, 1425
Ecl136II GAGCTC 2 cut(s) 105, 2346
Eco130I CCWWGG 7 cut(s) 416, 613, 1171, 1274, 1318, 1613, 1744
Eco24I GRGCYC 2 cut(s) 107, 2348
Eco32I GATATC 2 cut(s) 1127, 2008
Eco47I GGWCC 4 cut(s) 779, 851, 2246, 2261
Eco53kI GAGCTC 2 cut(s) 105, 2346
Eco57I CTGAAG 4 cut(s) 332, 959, 1468, 1804
EcoICRI GAGCTC 2 cut(s) 105, 2346
EcoO109I RGGNCCY 2 cut(s) 779, 2353
EcoRI GAATTC 1 cut(s) 2216
EcoRII CCWGG 2 cut(s) 188, 2305
EcoRV GATATC 2 cut(s) 1127, 2008
EcoT14I CCWWGG 7 cut(s) 416, 613, 1171, 1274, 1318, 1613, 1744
EcoT22I ATGCAT 1 cut(s) 148
EcoT38I GRGCYC 2 cut(s) 107, 2348
ErhI CCWWGG 7 cut(s) 416, 613, 1171, 1274, 1318, 1613, 1744
Esp3I CGTCTC 1 cut(s) 2230
FalI AAGNNNNNCTT 2 cut(s) 116, 148
FaqI GGGAC 1 cut(s) 449
FbaI TGATCA 1 cut(s) 2523
FblI GTMKAC 2 cut(s) 841, 1883
Fnu4HI GCNGC 3 cut(s) 226, 687, 1730
FokI GGATG 5 cut(s) 248, 692, 1204, 1330, 1705
FriOI GRGCYC 2 cut(s) 107, 2348
Fsp4HI GCNGC 3 cut(s) 226, 687, 1730
FspBI CTAG 9 cut(s) 399, 488, 621, 752, 887, 896, 1226, 1424, 2147
GlaI GCGC 1 cut(s) 2492
GluI GCNGC 3 cut(s) 226, 687, 1730
GsaI CCCAGC 2 cut(s) 728, 872
GsuI CTGGAG 3 cut(s) 944, 2418, 2525
HaeIII GGCC 5 cut(s) 1254, 1324, 1605, 2354, 2477
HhaI GCGC 1 cut(s) 2493
Hin1I GRCGYC 1 cut(s) 1902
Hin6I GCGC 1 cut(s) 2491
HinP1I GCGC 1 cut(s) 2491
HincII GTYRAC 4 cut(s) 1282, 1876, 1884, 1900
HindII GTYRAC 4 cut(s) 1282, 1876, 1884, 1900
HindIII AAGCTT 1 cut(s) 1989
HphI GGTGA 4 cut(s) 335, 1386, 1543, 2414
Hpy166II GTNNAC 7 cut(s) 343, 842, 1282, 1876, 1884, 1900, 2261
Hpy8I GTNNAC 7 cut(s) 343, 842, 1282, 1876, 1884, 1900, 2261
Hpy99I CGWCG 1 cut(s) 2134
HpyAV CCTTC 7 cut(s) 356, 477, 2021, 2026, 2287, 2382, 2548
HpyCH4III ACNGT 3 cut(s) 483, 675, 1897
HpyCH4IV ACGT 3 cut(s) 1902, 2223, 2519
HpyF10VI GCNNNNNNNGC 4 cut(s) 1094, 1150, 2263, 2474
HpySE526I ACGT 3 cut(s) 1902, 2223, 2519
Hsp92I GRCGYC 1 cut(s) 1902
HspAI GCGC 1 cut(s) 2491
Ksp22I TGATCA 1 cut(s) 2523
LmnI GCTCC 2 cut(s) 329, 1141
Lsp1109I GCAGC 2 cut(s) 212, 673
LweI GCATC 5 cut(s) 155, 944, 1140, 1349, 1626
MaeI CTAG 9 cut(s) 399, 488, 621, 752, 887, 896, 1226, 1424, 2147
MaeII ACGT 3 cut(s) 1902, 2223, 2519
MaeIII GTNAC 6 cut(s) 24, 248, 500, 872, 1696, 2070
MbiI CCGCTC 2 cut(s) 993, 1144
MboII GAAGA 8 cut(s) 37, 322, 711, 965, 1412, 1840, 2084, 2396
MfeI CAATTG 2 cut(s) 1595, 2189
MflI RGATCY 3 cut(s) 531, 553, 2320
MhlI GDGCHC 4 cut(s) 107, 1208, 2348, 2427
MlsI TGGCCA 1 cut(s) 2477
MluNI TGGCCA 1 cut(s) 2477
MlyI GAGTC 4 cut(s) 471, 847, 1291, 2062
MmeI TCCRAC 4 cut(s) 342, 657, 1332, 2494
Mox20I TGGCCA 1 cut(s) 2477
Mph1103I ATGCAT 1 cut(s) 148
MroXI GAANNNNTTC 2 cut(s) 1390, 2276
MscI TGGCCA 1 cut(s) 2477
MseI TTAA 4 cut(s) 579, 1590, 1953, 2076
MslI CAYNNNNRTG 1 cut(s) 1088
Msp20I TGGCCA 1 cut(s) 2477
MspA1I CMGCKG 1 cut(s) 2200
MspR9I CCNGG 2 cut(s) 190, 2307
MunI CAATTG 2 cut(s) 1595, 2189
Mva1269I GAATGC 1 cut(s) 1099
MvaI CCWGG 2 cut(s) 190, 2307
MvnI CGCG 2 cut(s) 2257, 2493
MwoI GCNNNNNNNGC 4 cut(s) 1094, 1150, 2263, 2474
NcoI CCATGG 3 cut(s) 613, 1171, 1318
NlaIV GGNNCC 2 cut(s) 714, 2355
NmuCI GTSAC 2 cut(s) 248, 2070
NsiI ATGCAT 1 cut(s) 148
NspI RCATGY 1 cut(s) 1315
PagI TCATGA 1 cut(s) 91
PciI ACATGT 1 cut(s) 1311
PcsI WCGNNNNNNNCGW 1 cut(s) 249
PctI GAATGC 1 cut(s) 1099
PdmI GAANNNNTTC 2 cut(s) 1390, 2276
PfoI TCCNGGA 2 cut(s) 188, 2305
PkrI GCNGC 3 cut(s) 227, 688, 1731
PleI GAGTC 4 cut(s) 470, 846, 1291, 2061
PpsI GAGTC 4 cut(s) 470, 846, 1291, 2061
PpuMI RGGWCCY 1 cut(s) 779
PscI ACATGT 1 cut(s) 1311
PsiI TTATAA 2 cut(s) 909, 1239
Psp124BI GAGCTC 2 cut(s) 107, 2348
Psp1406I AACGTT 1 cut(s) 2519
Psp5II RGGWCCY 1 cut(s) 779
Psp6I CCWGG 2 cut(s) 188, 2305
PspFI CCCAGC 2 cut(s) 724, 868
PspGI CCWGG 2 cut(s) 188, 2305
PspN4I GGNNCC 2 cut(s) 714, 2355
PspPI GGNCC 6 cut(s) 779, 851, 1322, 2246, 2261, 2353
PspPPI RGGWCCY 1 cut(s) 779
PsrI GAACNNNNNNTAC 2 cut(s) 1399, 1431
PstNI CAGNNNCTG 1 cut(s) 355
PsuI RGATCY 3 cut(s) 531, 553, 2320
PvuII CAGCTG 1 cut(s) 2200
RsaI GTAC 5 cut(s) 67, 835, 893, 1182, 2145
RsaNI GTAC 5 cut(s) 66, 834, 892, 1181, 2144
RseI CAYNNNNRTG 1 cut(s) 1088
SacI GAGCTC 2 cut(s) 107, 2348
SalI GTCGAC 1 cut(s) 1882
SaqAI TTAA 4 cut(s) 579, 1590, 1953, 2076
SatI GCNGC 3 cut(s) 226, 687, 1730
Sau96I GGNCC 6 cut(s) 779, 851, 1322, 2246, 2261, 2353
ScaI AGTACT 2 cut(s) 67, 2145
SchI GAGTC 4 cut(s) 471, 847, 1291, 2062
ScrFI CCNGG 2 cut(s) 190, 2307
SduI GDGCHC 4 cut(s) 107, 1208, 2348, 2427
SfaNI GCATC 5 cut(s) 155, 944, 1140, 1349, 1626
SinI GGWCC 4 cut(s) 779, 851, 2246, 2261
SmiMI CAYNNNNRTG 1 cut(s) 1088
SmlI CTYRAG 7 cut(s) 201, 1034, 1120, 1450, 1567, 1640, 2011
SmoI CTYRAG 7 cut(s) 201, 1034, 1120, 1450, 1567, 1640, 2011
SspMI CTAG 9 cut(s) 399, 488, 621, 752, 887, 896, 1226, 1424, 2147
SstI GAGCTC 2 cut(s) 107, 2348
StyD4I CCNGG 2 cut(s) 188, 2305
StyI CCWWGG 7 cut(s) 416, 613, 1171, 1274, 1318, 1613, 1744
TaaI ACNGT 3 cut(s) 483, 675, 1897
TaiI ACGT 3 cut(s) 1905, 2226, 2522
TaqI TCGA 6 cut(s) 243, 460, 606, 1044, 1883, 2129
TatI WGTACW 2 cut(s) 65, 2143
TauI GCSGC 1 cut(s) 1732
Tru1I TTAA 4 cut(s) 579, 1590, 1953, 2076
Tru9I TTAA 4 cut(s) 579, 1590, 1953, 2076
TscAI CASTG 6 cut(s) 1332, 1404, 1475, 1492, 1828, 2104
TseFI GTSAC 2 cut(s) 248, 2070
TseI GCWGC 2 cut(s) 225, 686
Tsp45I GTSAC 2 cut(s) 248, 2070
TspDTI ATGAA 8 cut(s) 25, 1106, 1374, 1517, 1900, 2001, 2055, 2280
TspGWI ACGGA 3 cut(s) 323, 2451, 2500
TspRI CASTG 6 cut(s) 1332, 1404, 1475, 1492, 1828, 2104
VpaK11BI GGWCC 4 cut(s) 779, 851, 2246, 2261
XbaI TCTAGA 1 cut(s) 751
XceI RCATGY 1 cut(s) 1315
XcmI CCANNNNNNNNNTGG 2 cut(s) 557, 861
XmiI GTMKAC 2 cut(s) 841, 1883
XmnI GAANNNNTTC 2 cut(s) 1390, 2276
XspI CTAG 9 cut(s) 399, 488, 621, 752, 887, 896, 1226, 1424, 2147
ZraI GACGTC 1 cut(s) 1903
ZrmI AGTACT 2 cut(s) 67, 2145
Zsp2I ATGCAT 1 cut(s) 148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.