FvH4_6g40840

Leucine rich repeat N-terminal domain

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
32237608 .. 32241006
3399 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g40840.t1

Sequence Viewer

Length: 3093 bp
ATGGCATCATCCTGCTGGTGTAAATTCTTAGCTCTGCTTTATTTTGCGTTATTATTGTTCAGTAATCCTACATGCAGTACTTCTTTTGTGCAGAGGCAGACGCTTTGCCGCGAAGAGGAGCGCTCTGCCTTACTGCAATTCAAGGCTAGTCTCAAGACAAACATGACTGCTTCTAGTGATCCCCTTGCTTATCCAAAGGTTGCATCTTGGGACAGGCCCGAAGGTGATCCTCAAAGGAGTAATTGTTGTTCTTGGGATGGTATTGAATGCAATGAGGAATCTGGCCATGTTATTGGCCTTGACCTTGGCAGCAGCTGCCTTCATGGTTCCATCAACTCCAGTAGTAGTCTGTTTCAACTTGTTAGGTTGCAGAGGCTTGATCTCTCTGACAATAACTTCAACTTCTCTGAAATACCATCCAGGTTAGGCCATGATCTTACGAGTCTAACATATCTCAACCTTTCAATGTCTTCATTTTCTGGACAAATTCCATTAGAAATTTCATATCTATCAAAACTGTCTACCCTTGATCTGTCTTCAAGTTCCTGGCCTCCTCTCAAACTGCCCAACTTCAGAAGCCTAACTCAAAATTTGACCAGCATAAAACAACTTCATCTTCGTTTGGTAGAGATAGCCTCCACAGTGCCTAGCTCATTGGTGAATCTGTCTTCTCTGACATCTCTTCGTCTTCAAGCATGTAACTTGGAGGGAAACTTCCCGGTAGGCATTTTCCACCTACCAAACTTGCAAGTACTTGACTTGGCCTATAACAACAATCTAACCGGTTATTTTCCTGAGGACCTTAACATGAGCAGCCCCTTGAAGATATTGAATCTGCCGTCAACCAATTTCTCTGGTCATCTACCTGATTCAATCGGAAACCTTCGTGCCTTAAATTTGCTGAATATATCATCCTGTCACTTTTATCCCCATGTTCCATCTTCACTTTCCAACCTTACCCAGCTCAATCTTCTTGATCTTTCTTCCTTTTATGACTATAGTTATCGACCTTACCTTCCATCAATCCATACTTTCAGTGGCCAAGCTTCAGATTCCTGGTCAGGGATAGGAAAGCTGACCAAACTCTACAACTTGGTTCTTCAGGATACCAACTTAAGGGGAGATTTGCCATCTTCTTTGGCTAATCTGACTCAACTTTTGGAATTAGACTTGAGCCAGAATCAATTAAGTGGTGAAATCCCATGCTTCTTGGCAAATCTGACACAACTTACAAAATTACGATTGGGCTACAATCAAATAAGTGGTCAAATCCCTTCTTGCCTAGAGCAGTTGAACCAATTGACATTATTAGACTTACGATCCAACCATCTTCAAGGAACCATCCCCAGGTCACTTTTCCAGCTTACAAGTCTTGAATATATATTCCTCAACTCAAATAACTTGAGTGGAAATGTTGAATTCGATGACTTTTCCAAGCTAAAAAAGTTGAGGGGACTTCGTTTGTCGCTCAACAAGTTATCTGTGCAGATCAAAACTGGATTTACTGCTATTCCTCCAAAGATTAATTTACTAGAATTGGGTTCATGCAATTTAACAGAGTTTCCAGAATTTTTGAAATACACTAGTGAACTGATGCATCTAGATCTATCTGACAACAATCTTCATGGCCAAATACCAAAATGGATGTGGAATTCTACTAGTGAATCATTGAGATACCTCAACCTCTCTCATAACCACTTAACTGGATTTGAAGAAAATCCCGTCATTATTCCATGGAATCAGTTAAGCTCCTTACAGCTAGACTCTAATATGTTACAAGGATCACTGCCAGTTCCAGTGCCGTCAATTGCGGTCTATTCTATTTCAAACAATGGATACACGGGAGAAATTCCAGCAACATTCTGCAATGCGGGGACCCTGAATATTCTTGATTTATCTAACAACAACCTGAATGGCATGATTCCCCAATGCTTTGAGAATTTTGGAGCTCTTCAGATATTGAAACTGCGGAACAATTCTTTTCATGGGGATATTCCTCAAATATGTTTAAACACAAGTATGGAGTTAGCCGCTATTGACTTGAGTTATAATCAGCTACAGGGGAAGCTACCAAGATCAATTGCCAATTGTCCTCGGTTGATGTTTCTTAATTTGGGAAATAATCAGATCAGTGATACATTCCCATCTTGGTTAGGAGTGCTTCAACAATTAAGAGTTCTCATATTGCGGTCTAATGCATTTCATGGCATAATTGGAAAGCCTACAAGTGGCATTGAGTTCCCTTTGCTGTCCATTGTTGATTTATCTAGCAACAATTTTTCAGGTACGTTGCCCTCCGACTACTTAGAGAACTGGAATGCCATGAAATCTGTTGATGAAAACGAGCAAATATATGTCCAATCCGCTATCATCTTCGGTATGTATCCTGACACGTTTCGCTATGATTACCCGATTACAGTTTTTAACAAAGGTGTTGAACTGAAGTACTTCAAGACCCCTTATCTTCTGAGACTCATAGACCTCTCAAGTAACAGATTTGAAGGACAGATTCCGGCTCTCATTGGGAATCTAAGAGCGCTTCATTTGCTCAATCTTTCCAACAACACGCTCACTGGTCCCATCCCCTCTTCTTTTGGGAACTTGACTGCTGTTGAATCGTTGGATCTCTCCCAAAATCAGCTCTCAGGAAAGATTCCCAGTGATCTAGCACAACTGACATTCCTTGCATACTTTAATGTATCCCACAATCTTCTTTATGGTCCTATCCCACAAGGTCGACAGTTTGATACATTCCAAGAGAATATGTACCAAGGAAACTCAGGTTTATGTGGAAAACCTTTATCAAAGAAATGTGAAGATTCTGAGAGCGCAACACCACAAACACCAACTTTTGAACAAGAGGAAGACTCAGGATTTCAAATTGAACTAGATTGGTATGTGATTCTGCCAGGAGTTGTTACTGGTCTAATAGTTGGAGTGTGGTTGGAGAAAACTTTTGGACAGCCAAGAAGCATCACTGGTTTGTGGAGACATTTAGCAGGAGTTAGCCGAGAAGCACAAGGTGAGAGAGGGGAATCAGAACTTGGTCCTTATTTATTCCATGTATGTAGGTGCTCGGTTCATGAACATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1031

Amino Acids

114.72

Weight (kDa)

5.53

Isoelectric Point (pI)

43.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 39 - 91 1.2e-07 Leucine rich repeat N-terminal domain
LRR_14 PF23598 100 - 231 1.3e-06 Leucine-rich repeat region
LRR_14 PF23598 247 - 329 1.6e-08 Leucine-rich repeat region
LRR_14 PF23598 348 - 537 6.8e-10 Leucine-rich repeat region
LRR_8 PF13855 361 - 420 1e-05 Leucine rich repeat
LRR_8 PF13855 609 - 660 1.9e-06 Leucine rich repeat
LRR_8 PF13855 676 - 733 4.5e-06 Leucine rich repeat
LRR_8 PF13855 846 - 905 6.2e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2049
AccI GTMKAC 2 cut(s) 521, 2737
AccII CGCG 1 cut(s) 111
AciI CCGC 7 cut(s) 109, 1811, 1871, 1969, 2031, 2188, 2364
AclWI GGATC 5 cut(s) 173, 221, 1314, 1789, 2631
AcoI YGGCCR 3 cut(s) 283, 1039, 1627
AcuI CTGAAG 5 cut(s) 556, 1032, 1085, 1937, 2462
AdeI CACNNNGTG 1 cut(s) 3023
AfaI GTAC 5 cut(s) 79, 753, 2287, 2447, 2768
AfeI AGCGCT 2 cut(s) 122, 2538
AfiI CCNNNNNNNGG 5 cut(s) 115, 1062, 1116, 1347, 2228
AflII CTTAAG 1 cut(s) 1114
AflIII ACRYGT 1 cut(s) 2391
AgeI ACCGGT 1 cut(s) 782
AhlI ACTAGT 2 cut(s) 1583, 1658
AjnI CCWGG 5 cut(s) 419, 545, 1055, 1346, 2908
AjuI GAANNNNNNNTTGG 2 cut(s) 3027, 3059
Alw21I GWGCWC 2 cut(s) 1951, 3077
Alw26I GTCTC 3 cut(s) 155, 2464, 2983
AlwI GGATC 5 cut(s) 173, 221, 1314, 1789, 2631
AlwNI CAGNNNCTG 1 cut(s) 315
Aor51HI AGCGCT 2 cut(s) 122, 2538
AoxI GGCC 8 cut(s) 215, 283, 295, 427, 548, 762, 1039, 1627
ApeKI GCWGC 4 cut(s) 309, 312, 315, 813
ArsI GACNNNNNNTTYG 4 cut(s) 1141, 1173, 1249, 1281
AseI ATTAAT 1 cut(s) 1524
AsiGI ACCGGT 1 cut(s) 782
Asp700I GAANNNNTTC 1 cut(s) 2447
AspLEI GCGC 3 cut(s) 123, 2539, 2831
AspS9I GGNCC 6 cut(s) 216, 799, 1875, 2576, 2720, 3047
AsuC2I CCSGG 1 cut(s) 719
AsuHPI GGTGA 4 cut(s) 236, 670, 1205, 3035
AvaII GGWCC 5 cut(s) 799, 1875, 2576, 2720, 3047
AxyI CCTNAGG 1 cut(s) 795
BalI TGGCCA 3 cut(s) 285, 1041, 1629
BanII GRGCYC 1 cut(s) 1951
BbsI GAAGAC 5 cut(s) 462, 528, 660, 680, 2871
Bbv12I GWGCWC 2 cut(s) 1951, 3077
BbvI GCAGC 4 cut(s) 302, 321, 324, 825
BceAI ACGGC 2 cut(s) 823, 1786
BciT130I CCWGG 5 cut(s) 421, 547, 1057, 1348, 2910
BciVI GTATCC 4 cut(s) 1099, 1829, 2394, 2710
BcnI CCSGG 1 cut(s) 719
BcoDI GTCTC 3 cut(s) 155, 2464, 2983
BcuI ACTAGT 2 cut(s) 1583, 1658
BfmI CTRYAG 2 cut(s) 997, 2057
BfoI RGCGCY 2 cut(s) 124, 2540
BfrI CTTAAG 1 cut(s) 1114
BfuI GTATCC 4 cut(s) 1099, 1829, 2394, 2710
BglII AGATCT 1 cut(s) 1603
BisI GCNGC 6 cut(s) 109, 310, 313, 316, 814, 2031
BlsI GCNGC 6 cut(s) 110, 311, 314, 317, 815, 2032
BmcAI AGTACT 3 cut(s) 79, 753, 2447
Bme1390I CCNGG 6 cut(s) 421, 547, 719, 1057, 1348, 2910
Bme18I GGWCC 5 cut(s) 799, 1875, 2576, 2720, 3047
BmgT120I GGNCC 6 cut(s) 216, 799, 1875, 2576, 2720, 3047
BmiI GGNNCC 5 cut(s) 328, 1339, 1876, 1877, 2578
BmrFI CCNGG 6 cut(s) 421, 547, 719, 1057, 1348, 2910
BmrI ACTGGG 1 cut(s) 2652
BmsI GCATC 5 cut(s) 14, 212, 1584, 1606, 2982
BmuI ACTGGG 1 cut(s) 2652
BpiI GAAGAC 5 cut(s) 462, 528, 660, 680, 2871
BplI GAGNNNNNCTC 6 cut(s) 107, 139, 620, 652, 2852, 2884
BpmI CTGGAG 1 cut(s) 322
BpuEI CTTGAG 5 cut(s) 137, 1192, 1423, 2062, 2470
BpuMI CCSGG 1 cut(s) 719
BsaJI CCNNGG 5 cut(s) 304, 1346, 1733, 2093, 2770
BsaWI WCCGGW 1 cut(s) 782
BsaXI ACNNNNNCTCC 2 cut(s) 229, 259
Bsc4I CCNNNNNNNGG 5 cut(s) 115, 1062, 1116, 1347, 2228
Bse118I RCCGGY 1 cut(s) 782
Bse21I CCTNAGG 1 cut(s) 795
Bse3DI GCAATG 2 cut(s) 277, 1873
BseBI CCWGG 5 cut(s) 421, 547, 1057, 1348, 2910
BseDI CCNNGG 5 cut(s) 304, 1346, 1733, 2093, 2770
BseGI GGATG 7 cut(s) 8, 262, 416, 911, 1341, 1650, 2580
BseLI CCNNNNNNNGG 5 cut(s) 115, 1062, 1116, 1347, 2228
BseMI GCAATG 2 cut(s) 277, 1873
BseMII CTCAG 6 cut(s) 786, 2459, 2658, 2793, 2814, 2883
BseRI GAGGAG 2 cut(s) 131, 543
BseXI GCAGC 4 cut(s) 302, 321, 324, 825
BseYI CCCAGC 1 cut(s) 960
BsgI GTGCAG 2 cut(s) 110, 1505
Bsh1236I CGCG 1 cut(s) 111
BshFI GGCC 8 cut(s) 217, 285, 297, 429, 550, 764, 1041, 1629
BshTI ACCGGT 1 cut(s) 782
BsiHKAI GWGCWC 2 cut(s) 1951, 3077
BsiSI CCGG 3 cut(s) 719, 783, 2513
BslFI GGGAC 4 cut(s) 224, 1467, 1888, 2562
BslI CCNNNNNNNGG 5 cut(s) 115, 1062, 1116, 1347, 2228
BsmAI GTCTC 3 cut(s) 155, 2464, 2983
BsmFI GGGAC 4 cut(s) 224, 1467, 1888, 2562
BsmI GAATGC 2 cut(s) 272, 2323
BsnI GGCC 8 cut(s) 217, 285, 297, 429, 550, 764, 1041, 1629
Bsp1286I GDGCHC 2 cut(s) 1951, 3077
Bsp19I CCATGG 1 cut(s) 1733
BspACI CCGC 7 cut(s) 109, 1811, 1871, 1969, 2031, 2188, 2364
BspANI GGCC 8 cut(s) 217, 285, 297, 429, 550, 764, 1041, 1629
BspCNI CTCAG 6 cut(s) 787, 2460, 2657, 2792, 2815, 2882
BspFNI CGCG 1 cut(s) 111
BspHI TCATGA 1 cut(s) 3082
BspLI GGNNCC 5 cut(s) 328, 1339, 1876, 1877, 2578
BspPI GGATC 5 cut(s) 173, 221, 1314, 1789, 2631
BspQI GCTCTTC 1 cut(s) 1956
BspTI CTTAAG 1 cut(s) 1114
BsrDI GCAATG 2 cut(s) 277, 1873
BsrFI RCCGGY 1 cut(s) 782
BssAI RCCGGY 1 cut(s) 782
BssECI CCNNGG 5 cut(s) 304, 1346, 1733, 2093, 2770
BssT1I CCWWGG 3 cut(s) 304, 1733, 2770
Bst2UI CCWGG 5 cut(s) 421, 547, 1057, 1348, 2910
Bst4CI ACNGT 4 cut(s) 519, 643, 2419, 2742
Bst6I CTCTTC 4 cut(s) 108, 687, 1956, 2593
BstAFI CTTAAG 1 cut(s) 1114
BstAPI GCANNNNNTGC 1 cut(s) 315
BstDEI CTNAG 9 cut(s) 28, 795, 2305, 2468, 2531, 2644, 2779, 2823, 2869
BstDSI CCRYGG 1 cut(s) 1733
BstF5I GGATG 7 cut(s) 8, 262, 416, 911, 1341, 1650, 2580
BstFNI CGCG 1 cut(s) 111
BstH2I RGCGCY 2 cut(s) 124, 2540
BstHHI GCGC 3 cut(s) 123, 2539, 2831
BstMAI GTCTC 3 cut(s) 155, 2464, 2983
BstMWI GCNNNNNNNGC 2 cut(s) 315, 2545
BstNI CCWGG 5 cut(s) 421, 547, 1057, 1348, 2910
BstNSI RCATGY 2 cut(s) 75, 699
BstSCI CCNGG 6 cut(s) 419, 545, 717, 1055, 1346, 2908
BstSFI CTRYAG 2 cut(s) 997, 2057
BstUI CGCG 1 cut(s) 111
BstV1I GCAGC 4 cut(s) 302, 321, 324, 825
BstV2I GAAGAC 5 cut(s) 462, 528, 660, 680, 2871
BstX2I RGATCY 2 cut(s) 1603, 2623
BstXI CCANNNNNNTGG 2 cut(s) 293, 1703
BstYI RGATCY 2 cut(s) 1603, 2623
Bsu36I CCTNAGG 1 cut(s) 795
BsuI GTATCC 4 cut(s) 1099, 1829, 2394, 2710
BsuRI GGCC 8 cut(s) 217, 285, 297, 429, 550, 764, 1041, 1629
BtgI CCRYGG 1 cut(s) 1733
BtsCI GGATG 7 cut(s) 8, 262, 416, 911, 1341, 1650, 2580
BtsI GCAGTG 1 cut(s) 1784
BtsIMutI CAGTG 8 cut(s) 648, 1042, 1784, 1803, 2137, 2571, 2665, 2976
CaiI CAGNNNCTG 1 cut(s) 315
CciI TCATGA 1 cut(s) 3082
CfoI GCGC 3 cut(s) 123, 2539, 2831
Cfr10I RCCGGY 1 cut(s) 782
Cfr13I GGNCC 6 cut(s) 216, 799, 1875, 2576, 2720, 3047
CseI GACGC 1 cut(s) 109
Csp6I GTAC 5 cut(s) 78, 752, 2286, 2446, 2767
CspAI ACCGGT 1 cut(s) 782
CviQI GTAC 5 cut(s) 78, 752, 2286, 2446, 2767
DdeI CTNAG 9 cut(s) 28, 795, 2305, 2468, 2531, 2644, 2779, 2823, 2869
DraI TTTAAA 1 cut(s) 2010
DraIII CACNNNGTG 1 cut(s) 3023
EaeI YGGCCR 3 cut(s) 283, 1039, 1627
Eam1104I CTCTTC 4 cut(s) 108, 687, 1956, 2593
EarI CTCTTC 4 cut(s) 108, 687, 1956, 2593
Ecl136II GAGCTC 1 cut(s) 1949
Eco130I CCWWGG 3 cut(s) 304, 1733, 2770
Eco24I GRGCYC 1 cut(s) 1951
Eco47I GGWCC 5 cut(s) 799, 1875, 2576, 2720, 3047
Eco47III AGCGCT 2 cut(s) 122, 2538
Eco53kI GAGCTC 1 cut(s) 1949
Eco57I CTGAAG 5 cut(s) 556, 1032, 1085, 1937, 2462
Eco81I CCTNAGG 1 cut(s) 795
EcoICRI GAGCTC 1 cut(s) 1949
EcoO109I RGGNCCY 2 cut(s) 799, 1875
EcoRI GAATTC 2 cut(s) 1418, 1651
EcoRII CCWGG 5 cut(s) 419, 545, 1055, 1346, 2908
EcoT14I CCWWGG 3 cut(s) 304, 1733, 2770
EcoT22I ATGCAT 2 cut(s) 1599, 2200
EcoT38I GRGCYC 1 cut(s) 1951
ErhI CCWWGG 3 cut(s) 304, 1733, 2770
FaqI GGGAC 4 cut(s) 224, 1467, 1888, 2562
FauI CCCGC 1 cut(s) 1864
FblI GTMKAC 2 cut(s) 521, 2737
Fnu4HI GCNGC 6 cut(s) 109, 310, 313, 316, 814, 2031
FokI GGATG 6 cut(s) 269, 403, 898, 1328, 1657, 2567
FriOI GRGCYC 1 cut(s) 1951
Fsp4HI GCNGC 6 cut(s) 109, 310, 313, 316, 814, 2031
GlaI GCGC 3 cut(s) 122, 2538, 2830
GluI GCNGC 6 cut(s) 109, 310, 313, 316, 814, 2031
GsaI CCCAGC 1 cut(s) 964
GsuI CTGGAG 1 cut(s) 322
HaeII RGCGCY 2 cut(s) 124, 2540
HaeIII GGCC 8 cut(s) 217, 285, 297, 429, 550, 764, 1041, 1629
HapII CCGG 3 cut(s) 719, 783, 2513
HgaI GACGC 1 cut(s) 109
HhaI GCGC 3 cut(s) 123, 2539, 2831
Hin6I GCGC 3 cut(s) 121, 2537, 2829
HinP1I GCGC 3 cut(s) 121, 2537, 2829
HincII GTYRAC 2 cut(s) 843, 2738
HindII GTYRAC 2 cut(s) 843, 2738
HindIII AAGCTT 1 cut(s) 1044
HpaII CCGG 3 cut(s) 719, 783, 2513
HphI GGTGA 4 cut(s) 236, 670, 1205, 3035
Hpy166II GTNNAC 4 cut(s) 522, 843, 1589, 2738
Hpy8I GTNNAC 4 cut(s) 522, 843, 1589, 2738
HpyAV CCTTC 6 cut(s) 215, 329, 893, 1025, 1284, 2495
HpyCH4III ACNGT 4 cut(s) 519, 643, 2419, 2742
HpyCH4IV ACGT 2 cut(s) 2288, 2393
HpyF10VI GCNNNNNNNGC 2 cut(s) 315, 2545
HpyF3I CTNAG 9 cut(s) 28, 795, 2305, 2468, 2531, 2644, 2779, 2823, 2869
HpySE526I ACGT 2 cut(s) 2288, 2393
HspAI GCGC 3 cut(s) 121, 2537, 2829
KflI GGGWCCC 1 cut(s) 1875
LguI GCTCTTC 1 cut(s) 1956
LmnI GCTCC 3 cut(s) 118, 1754, 1946
Lsp1109I GCAGC 4 cut(s) 302, 321, 324, 825
LweI GCATC 5 cut(s) 14, 212, 1584, 1606, 2982
MaeII ACGT 2 cut(s) 2288, 2393
MaeIII GTNAC 6 cut(s) 698, 917, 1350, 1773, 2489, 2917
MfeI CAATTG 4 cut(s) 1298, 1806, 2079, 2086
MflI RGATCY 2 cut(s) 1603, 2623
MhlI GDGCHC 2 cut(s) 1951, 3077
MlsI TGGCCA 3 cut(s) 285, 1041, 1629
MluNI TGGCCA 3 cut(s) 285, 1041, 1629
MlyI GAGTC 5 cut(s) 451, 1144, 1757, 2466, 2861
MmeI TCCRAC 7 cut(s) 975, 1347, 2322, 2583, 2601, 2914, 2925
Mox20I TGGCCA 3 cut(s) 285, 1041, 1629
Mph1103I ATGCAT 2 cut(s) 1599, 2200
MroXI GAANNNNTTC 1 cut(s) 2447
MscI TGGCCA 3 cut(s) 285, 1041, 1629
MslI CAYNNNNRTG 1 cut(s) 2018
Msp20I TGGCCA 3 cut(s) 285, 1041, 1629
MspA1I CMGCKG 1 cut(s) 315
MspCI CTTAAG 1 cut(s) 1114
MspI CCGG 3 cut(s) 719, 783, 2513
MspR9I CCNGG 6 cut(s) 421, 547, 719, 1057, 1348, 2910
MssI GTTTAAAC 1 cut(s) 2010
MunI CAATTG 4 cut(s) 1298, 1806, 2079, 2086
Mva1269I GAATGC 2 cut(s) 272, 2323
MvaI CCWGG 5 cut(s) 421, 547, 1057, 1348, 2910
MvnI CGCG 1 cut(s) 111
MwoI GCNNNNNNNGC 2 cut(s) 315, 2545
NciI CCSGG 1 cut(s) 719
NcoI CCATGG 1 cut(s) 1733
NlaIV GGNNCC 5 cut(s) 328, 1339, 1876, 1877, 2578
NmeAIII GCCGAG 1 cut(s) 3035
NmuCI GTSAC 2 cut(s) 917, 1350
NsiI ATGCAT 2 cut(s) 1599, 2200
NspI RCATGY 2 cut(s) 75, 699
PagI TCATGA 1 cut(s) 3082
PciSI GCTCTTC 1 cut(s) 1956
PctI GAATGC 2 cut(s) 272, 2323
PdmI GAANNNNTTC 1 cut(s) 2447
PinAI ACCGGT 1 cut(s) 782
PkrI GCNGC 6 cut(s) 110, 311, 314, 317, 815, 2032
PleI GAGTC 5 cut(s) 450, 1144, 1757, 2466, 2861
PmeI GTTTAAAC 1 cut(s) 2010
PpsI GAGTC 5 cut(s) 450, 1144, 1757, 2466, 2861
PpuMI RGGWCCY 2 cut(s) 799, 1875
PshBI ATTAAT 1 cut(s) 1524
PsiI TTATAA 1 cut(s) 2049
Psp124BI GAGCTC 1 cut(s) 1951
Psp5II RGGWCCY 2 cut(s) 799, 1875
Psp6I CCWGG 5 cut(s) 419, 545, 1055, 1346, 2908
PspFI CCCAGC 1 cut(s) 960
PspGI CCWGG 5 cut(s) 419, 545, 1055, 1346, 2908
PspN4I GGNNCC 5 cut(s) 328, 1339, 1876, 1877, 2578
PspPI GGNCC 6 cut(s) 216, 799, 1875, 2576, 2720, 3047
PspPPI RGGWCCY 2 cut(s) 799, 1875
PsrI GAACNNNNNNTAC 2 cut(s) 232, 264
PstNI CAGNNNCTG 1 cut(s) 315
PsuI RGATCY 2 cut(s) 1603, 2623
PvuII CAGCTG 1 cut(s) 315
RsaI GTAC 5 cut(s) 79, 753, 2287, 2447, 2768
RsaNI GTAC 5 cut(s) 78, 752, 2286, 2446, 2767
RseI CAYNNNNRTG 1 cut(s) 2018
SacI GAGCTC 1 cut(s) 1951
SalI GTCGAC 1 cut(s) 2736
SapI GCTCTTC 1 cut(s) 1956
SatI GCNGC 6 cut(s) 109, 310, 313, 316, 814, 2031
Sau96I GGNCC 6 cut(s) 216, 799, 1875, 2576, 2720, 3047
ScaI AGTACT 3 cut(s) 79, 753, 2447
SchI GAGTC 5 cut(s) 451, 1144, 1757, 2466, 2861
ScrFI CCNGG 6 cut(s) 421, 547, 719, 1057, 1348, 2910
SduI GDGCHC 2 cut(s) 1951, 3077
SfaNI GCATC 5 cut(s) 14, 212, 1584, 1606, 2982
SfcI CTRYAG 2 cut(s) 997, 2057
SinI GGWCC 5 cut(s) 799, 1875, 2576, 2720, 3047
SmiMI CAYNNNNRTG 1 cut(s) 2018
SmlI CTYRAG 6 cut(s) 152, 1114, 1171, 1402, 2041, 2485
SmoI CTYRAG 6 cut(s) 152, 1114, 1171, 1402, 2041, 2485
SpeI ACTAGT 2 cut(s) 1583, 1658
SsiI CCGC 7 cut(s) 109, 1811, 1871, 1969, 2031, 2188, 2364
SspI AATATT 1 cut(s) 1885
SstI GAGCTC 1 cut(s) 1951
StyD4I CCNGG 6 cut(s) 419, 545, 717, 1055, 1346, 2908
StyI CCWWGG 3 cut(s) 304, 1733, 2770
TaaI ACNGT 4 cut(s) 519, 643, 2419, 2742
TaiI ACGT 2 cut(s) 2291, 2396
TaqI TCGA 3 cut(s) 1006, 1422, 2737
TatI WGTACW 3 cut(s) 77, 751, 2445
TauI GCSGC 2 cut(s) 111, 2033
TscAI CASTG 8 cut(s) 648, 1042, 1791, 1803, 2137, 2578, 2665, 2983
TseFI GTSAC 2 cut(s) 917, 1350
TseI GCWGC 4 cut(s) 309, 312, 315, 813
Tsp45I GTSAC 2 cut(s) 917, 1350
TspRI CASTG 8 cut(s) 648, 1042, 1791, 1803, 2137, 2578, 2665, 2983
Vha464I CTTAAG 1 cut(s) 1114
VpaK11BI GGWCC 5 cut(s) 799, 1875, 2576, 2720, 3047
VspI ATTAAT 1 cut(s) 1524
XbaI TCTAGA 1 cut(s) 1600
XceI RCATGY 2 cut(s) 75, 699
XcmI CCANNNNNNNNNTGG 2 cut(s) 1034, 1644
XmiI GTMKAC 2 cut(s) 521, 2737
XmnI GAANNNNTTC 1 cut(s) 2447
ZrmI AGTACT 3 cut(s) 79, 753, 2447
Zsp2I ATGCAT 2 cut(s) 1599, 2200
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.