RchiOBHm_Chr1g0368411

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000024
Physical Location & Seq
Reverse (-)
58529822 .. 58532831
3010 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ59276

Sequence Viewer

Length: 2853 bp
ATGATGGGGTTATCCCATTGCTTGTTACTATTTTTCATCTTTTTCTTCAAGGGGTGCAATACCGGTACTTCCCATGAGCTATCTTATTGTCATGATGAGGAGAGCTTTGCCTTGCTACAATTCAAGCAAAGCTTTACTATCAATGCATCTGCTTCGGGTTTAGAGGGGGCTTACCCGAAAGTGTTGTCCTGGAAACAAGCTCAAGGAGGAAACAACATCAGCTGCTGCACATGGGATGGGGTCGAGTGTGACGAACACACGGGTCATGTGATCGGGCTTGATCTCAGAAGTAGTTGTCTCTACGGCTCTATTCACTCTAACAGCTCCCTCTTCAGTCTTGTTCACCTTCGGGGGCTGAACCTTGCCGATAATCACTTCAATTACTCTCAAATTCCTACTAGCATTAGGAATTTTCCGAGGCTCACCCATCTCGACCTCTCTGCCTCTGTATTTTCTGGTCAAGTCCCATCGGAAGTTTCACAGTTGGTCAAGTTGTCACTTCTTGATCTTTCTTTCAATACCGACCCTTCGTCGGGTGTAGGATTGTTGACACTTGATGGATCCAATTTGAGAAGTCTAGTTCAAAACTTAACTAATCTTCAACATCTTCGTCTCCGTTTCATCAATATATCTTCTCCAATACCCGATTCCATGGCCAATTTATCATTTTTGACAACCCTTGACTTCCATCAGTGTCACTTGTTTGGAGATTTCCCAGTTAGAATTTTCCAGTTACAAAACTTGCAAAATCTCTATCTCAGAGACAACCAAGATCTCATTGGTTATTTGCCTGAATTTAATAAAAGTAGTCCTCTCATAACTCTCGATGTTCATGGAACTAGATTTTCAGGGAACTTAGCCTTGTCGATCAGAAAGCTTGGTTCTTTGAAACAGCTGGATGTGGCTGCGTGCAATTTTTCAGCAGGGTTAGTTCCATCTTCGCTGGGTAATCTCAGAGAACTGACTTATCTAGACATTTCAGCAAACCCATTTGGAGGTCCTGTTCCAGATTCTTTTGCAAACCTTACAAAATTGTCTGTTTTTAGGATTTCTTCGAGTCTACTAACTGGTCCAATCCCATCCTGGCTGGGTAATTTTAGCGAACTAAAGTACCTAGACTTTAATTATAACAGCTTGAGTGGTTCAATTCCTACATCATTTTCCAATCTCACAAATCTCCAGATTCTTTATCTTCAGTCCAATAACCTGAGCGGTATAGTGGAGTTTCAAACATTTCAAAACCTACAAAATCTCAAGCAACTAGTTCTAAGCTCCAATTCTCTGGAATTTTTCTCTGAATCCACAGCAGTGAATGCAAGTACTGTTCCACAGTTCACCCATCTAAAGTTGACTTCATGCAACTTAAGAGAGTTCCCATATTTCCTGAGCTATCAAAAACATTTGCAGTATTTGCTCCTTAATAGAAACAAAATCCATGGGCAAGTACCAAAATGGATGTGGAACATGAGCACAGAATCCTTGGTTCACCTAGATATTTCTTATAATTTCCTGTCAGGCCAACTTCCTGTTTTCTTTCCTTGGGTCAACCAACTACACTTGGGTCTTTCTTCCAACATGTTCCATGGGCCACTGCCGATACCTGCATCATCCACTTTAGTCTATGAAGCTCATACCAACAAATTTACTGGAAAGCTTTCACCAGTGATCTGCAATATGAGTTCTCTTCGGGCCCTTGAATTGGACAATAACAACTTGAGTGGCATGATTCCGCAGTGTTTCGGAAACTTCAGTGATCCATTGACACTTCTACTTCTTCGAAATAACTCGTTTCATGGCACTCTACCACAAACATACACCAACAAAAGCAACTTGAGGATACTTGATGTGAGTCAAAATCAATTGCAAGGGCAACTGCCAAGGTCATTGGCCAATTGTCTGATGCTTGAGACTTTGGTCCTGTCAAACAATTACTTCAATGATGTCTTTCCCTTTTGGATGGCTACTCTACCTGAGTTGAAACTTTTGGCAATGCGGCATAATGCGTTCCAAGGATTGATAGGAAAGGGTGAAAACAATCAGCGGTTCCCAAAGTTGCGTGTCTTTGATATTTCTCACAATAACTTCACAGGCAAATTTGTAGCTGAATACGTCTTCTCCAAGTATGCCATGAGATCAGTCAACCAGTCCACCTATATCTCGGTTGTCATCAATTACGACTCTGGTAATGATTGGCTCGGTCATGAAGCTTATGATTCCACGATTAATATAACCATTAAAGGTGTGGATAGATACTATCCAAGGATTCAAGAAGCTTTTGCAGTCATTGATATCTCAAGCAACAAATTTGAAGGGAAGATTGATGAATCCATTGGGAGTCTAAAAGGGCTTTGGTCACTTAATTTTTCCAATAATCTTCTCAGTGGTCGTATCCCGTCATCGTTTGGGAACTTGACGAATCTTGAAGTACTAGACCTTTCCAATAACAAGCTCTGGGGAGAGATTCCCAAACAATTGGCACAGCTGACATTCCTTGCACAATTCAATGTCTCTCACAACAATCTCACAGGTCCAATACCGCGTGGACCGCAACTCAATACCTTCTCTATCAATTCATATAAGGGAAATCCTGGATTGTGCGGAGATCCTTTGCCAAAGAGATGTCAGAGCTCTAATGCCCCACCGGAACTGCCACCTTCAAACACAGAAGAAAATGATTCTGGAAGTGAATTTGAATGGGCTTTTGTGCTCGCTGGATGCGGAAGTGGGTTCGTGGTGGGAGTTGTGCTTGCGGACTTGGCCATCACACGGAGGCGTGAGTTCTTTCTTGAGATAGTTGGAACGTTGATCAGACTAATGGAAAGGATCACAAGCCGGAAGGGGTTTGGACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

950

Amino Acids

105.95

Weight (kDa)

6.8

Isoelectric Point (pI)

40.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 84 1.2e-06 Leucine rich repeat N-terminal domain
LRR_14 PF23598 93 - 184 4.5e-07 Leucine-rich repeat region
LRR_14 PF23598 194 - 301 5.4e-08 Leucine-rich repeat region
LRR_14 PF23598 287 - 502 6.5e-14 Leucine-rich repeat region
LRR_8 PF13855 344 - 403 2.1e-08 Leucine rich repeat
LRR_8 PF13855 761 - 817 3.5e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1128, 1503
Acc36I ACCTGC 1 cut(s) 1609
AccBSI CCGCTC 1 cut(s) 1212
AccI GTMKAC 1 cut(s) 1060
AccII CGCG 1 cut(s) 2539
AciI CCGC 9 cut(s) 1212, 1730, 1993, 2041, 2537, 2546, 2598, 2718, 2750
AclI AACGTT 1 cut(s) 2801
AclWI GGATC 5 cut(s) 555, 568, 1748, 2597, 2831
AcoI YGGCCR 3 cut(s) 654, 1887, 2757
AcsI RAATTY 9 cut(s) 390, 409, 723, 794, 1286, 1640, 2093, 2303, 2687
AcuI CTGAAG 3 cut(s) 316, 1178, 1732
AfaI GTAC 5 cut(s) 67, 1112, 1321, 1446, 2427
AfiI CCNNNNNNNGG 5 cut(s) 532, 533, 995, 1699, 2766
AflII CTTAAG 1 cut(s) 1363
AflIII ACRYGT 1 cut(s) 1575
AgeI ACCGGT 1 cut(s) 62
AhdI GACNNNNNGTC 1 cut(s) 529
AhlI ACTAGT 1 cut(s) 1261
AjnI CCWGG 3 cut(s) 188, 1082, 2587
AjuI GAANNNNNNNTTGG 2 cut(s) 631, 663
AleI CACNNNNGTG 1 cut(s) 1307
AloI GAACNNNNNNTCC 2 cut(s) 987, 1019
Alw21I GWGCWC 3 cut(s) 1472, 2630, 2709
Alw26I GTCTC 5 cut(s) 302, 617, 756, 1901, 2512
AlwI GGATC 5 cut(s) 555, 568, 1748, 2597, 2831
AlwNI CAGNNNCTG 1 cut(s) 225
AoxI GGCC 6 cut(s) 654, 1516, 1586, 1689, 1887, 2757
ApaI GGGCCC 1 cut(s) 1693
ApeKI GCWGC 3 cut(s) 222, 225, 905
ApoI RAATTY 9 cut(s) 390, 409, 723, 794, 1286, 1640, 2093, 2303, 2687
ArsI GACNNNNNNTTYG 2 cut(s) 170, 202
AseI ATTAAT 1 cut(s) 2223
AsiGI ACCGGT 1 cut(s) 62
Asp700I GAANNNNTTC 1 cut(s) 1654
AspS9I GGNCC 8 cut(s) 998, 1070, 1586, 1689, 1690, 1915, 2528, 2543
AsuHPI GGTGA 6 cut(s) 335, 415, 1327, 1478, 1650, 2039
AsuII TTCGAA 1 cut(s) 1777
AvaII GGWCC 5 cut(s) 998, 1070, 1915, 2528, 2543
BaeGI GKGCMC 1 cut(s) 1693
BaeI ACNNNNGTAYC 2 cut(s) 1094, 1127
BalI TGGCCA 3 cut(s) 656, 1889, 2759
BamHI GGATCC 1 cut(s) 560
BanII GRGCYC 2 cut(s) 1693, 2630
BbsI GAAGAC 1 cut(s) 2104
Bbv12I GWGCWC 3 cut(s) 1472, 2630, 2709
BbvI GCAGC 3 cut(s) 209, 212, 892
BceAI ACGGC 1 cut(s) 319
BcgI CGANNNNNNTGC 4 cut(s) 135, 169, 422, 456
BciT130I CCWGG 3 cut(s) 190, 1084, 2589
BciVI GTATCC 2 cut(s) 1830, 2399
BclI TGATCA 1 cut(s) 2805
BcoDI GTCTC 5 cut(s) 302, 617, 756, 1901, 2512
BcuI ACTAGT 1 cut(s) 1261
BfaI CTAG 8 cut(s) 399, 578, 840, 971, 1115, 1262, 1490, 2429
BfrI CTTAAG 1 cut(s) 1363
BfuAI ACCTGC 1 cut(s) 1609
BfuI GTATCC 2 cut(s) 1830, 2399
BglII AGATCT 1 cut(s) 772
BisI GCNGC 4 cut(s) 223, 226, 906, 1994
BlsI GCNGC 4 cut(s) 224, 227, 907, 1995
BmcAI AGTACT 2 cut(s) 1321, 2427
Bme1390I CCNGG 3 cut(s) 190, 1084, 2589
Bme18I GGWCC 5 cut(s) 998, 1070, 1915, 2528, 2543
BmeRI GACNNNNNGTC 1 cut(s) 529
BmgT120I GGNCC 8 cut(s) 998, 1070, 1586, 1689, 1690, 1915, 2528, 2543
BmiI GGNNCC 3 cut(s) 562, 1691, 2045
BmrFI CCNGG 3 cut(s) 190, 1084, 2589
BmrI ACTGGG 1 cut(s) 710
BmsI GCATC 4 cut(s) 155, 1613, 1890, 2705
BmuI ACTGGG 1 cut(s) 710
BoxI GACNNNNGTC 1 cut(s) 1913
BpiI GAAGAC 1 cut(s) 2104
BpmI CTGGAG 1 cut(s) 1163
Bpu10I CCTNAGC 2 cut(s) 1208, 1385
Bpu14I TTCGAA 1 cut(s) 1777
BpuEI CTTGAG 8 cut(s) 186, 1156, 1238, 1735, 1852, 1925, 2278, 2807
BsaJI CCNNGG 9 cut(s) 416, 651, 1435, 1479, 1538, 1582, 1877, 2008, 2258
BsaWI WCCGGW 2 cut(s) 62, 2641
BsaXI ACNNNNNCTCC 4 cut(s) 987, 1017, 2099, 2129
Bsc4I CCNNNNNNNGG 5 cut(s) 532, 533, 995, 1699, 2766
Bse118I RCCGGY 1 cut(s) 62
Bse1I ACTGG 6 cut(s) 716, 730, 1072, 1651, 1661, 2143
Bse3DI GCAATG 2 cut(s) 16, 1995
BseBI CCWGG 3 cut(s) 190, 1084, 2589
BseDI CCNNGG 9 cut(s) 416, 651, 1435, 1479, 1538, 1582, 1877, 2008, 2258
BseGI GGATG 7 cut(s) 241, 904, 1079, 1461, 1607, 1962, 2720
BseLI CCNNNNNNNGG 5 cut(s) 532, 533, 995, 1699, 2766
BseMI GCAATG 2 cut(s) 16, 1995
BseMII CTCAG 7 cut(s) 298, 772, 967, 1199, 1376, 1962, 2392
BseNI ACTGG 6 cut(s) 716, 730, 1072, 1651, 1661, 2143
BseRI GAGGAG 1 cut(s) 113
BseSI GKGCMC 1 cut(s) 1693
BseXI GCAGC 3 cut(s) 209, 212, 892
BseYI CCCAGC 2 cut(s) 943, 1087
BsgI GTGCAG 1 cut(s) 211
Bsh1236I CGCG 1 cut(s) 2539
BshFI GGCC 6 cut(s) 656, 1518, 1588, 1691, 1889, 2759
BshTI ACCGGT 1 cut(s) 62
BsiHKAI GWGCWC 3 cut(s) 1472, 2630, 2709
BsiSI CCGG 3 cut(s) 63, 2642, 2833
BslFI GGGAC 1 cut(s) 449
BslI CCNNNNNNNGG 5 cut(s) 532, 533, 995, 1699, 2766
BsmAI GTCTC 5 cut(s) 302, 617, 756, 1901, 2512
BsmBI CGTCTC 1 cut(s) 617
BsmFI GGGAC 1 cut(s) 449
BsmI GAATGC 1 cut(s) 1318
BsnI GGCC 6 cut(s) 656, 1518, 1588, 1691, 1889, 2759
Bsp119I TTCGAA 1 cut(s) 1777
Bsp120I GGGCCC 1 cut(s) 1689
Bsp1286I GDGCHC 4 cut(s) 1472, 1693, 2630, 2709
Bsp19I CCATGG 3 cut(s) 651, 1435, 1582
BspACI CCGC 9 cut(s) 1212, 1730, 1993, 2041, 2537, 2546, 2598, 2718, 2750
BspANI GGCC 6 cut(s) 656, 1518, 1588, 1691, 1889, 2759
BspCNI CTCAG 7 cut(s) 297, 771, 966, 1200, 1377, 1963, 2391
BspFNI CGCG 1 cut(s) 2539
BspHI TCATGA 2 cut(s) 91, 2200
BspLI GGNNCC 3 cut(s) 562, 1691, 2045
BspMI ACCTGC 1 cut(s) 1609
BspPI GGATC 5 cut(s) 555, 568, 1748, 2597, 2831
BspT104I TTCGAA 1 cut(s) 1777
BspTI CTTAAG 1 cut(s) 1363
BsrBI CCGCTC 1 cut(s) 1212
BsrDI GCAATG 2 cut(s) 16, 1995
BsrFI RCCGGY 1 cut(s) 62
BsrI ACTGG 6 cut(s) 716, 730, 1072, 1651, 1661, 2143
BssAI RCCGGY 1 cut(s) 62
BssECI CCNNGG 9 cut(s) 416, 651, 1435, 1479, 1538, 1582, 1877, 2008, 2258
BssT1I CCWWGG 8 cut(s) 651, 1435, 1479, 1538, 1582, 1877, 2008, 2258
Bst2UI CCWGG 3 cut(s) 190, 1084, 2589
Bst4CI ACNGT 3 cut(s) 483, 1324, 1332
Bst6I CTCTTC 2 cut(s) 335, 1689
BstAFI CTTAAG 1 cut(s) 1363
BstAPI GCANNNNNTGC 2 cut(s) 1313, 1411
BstBI TTCGAA 1 cut(s) 1777
BstC8I GCNNGC 3 cut(s) 910, 2709, 2748
BstDEI CTNAG 9 cut(s) 284, 758, 856, 953, 1208, 1268, 1385, 1971, 2378
BstDSI CCRYGG 3 cut(s) 651, 1435, 1582
BstF5I GGATG 7 cut(s) 241, 904, 1079, 1461, 1607, 1962, 2720
BstFNI CGCG 1 cut(s) 2539
BstMAI GTCTC 5 cut(s) 302, 617, 756, 1901, 2512
BstMWI GCNNNNNNNGC 4 cut(s) 1313, 1411, 2545, 2756
BstNI CCWGG 3 cut(s) 190, 1084, 2589
BstNSI RCATGY 1 cut(s) 1579
BstPAI GACNNNNGTC 1 cut(s) 1913
BstSCI CCNGG 3 cut(s) 188, 1082, 2587
BstSLI GKGCMC 1 cut(s) 1693
BstUI CGCG 1 cut(s) 2539
BstV1I GCAGC 3 cut(s) 209, 212, 892
BstV2I GAAGAC 1 cut(s) 2104
BstX2I RGATCY 3 cut(s) 560, 772, 2602
BstXI CCANNNNNNTGG 2 cut(s) 1282, 2473
BstYI RGATCY 3 cut(s) 560, 772, 2602
BsuI GTATCC 2 cut(s) 1830, 2399
BsuRI GGCC 6 cut(s) 656, 1518, 1588, 1691, 1889, 2759
BtgI CCRYGG 3 cut(s) 651, 1435, 1582
BtsCI GGATG 7 cut(s) 241, 904, 1079, 1461, 1607, 1962, 2720
BtsI GCAGTG 3 cut(s) 1314, 1589, 1739
BtsIMutI CAGTG 7 cut(s) 698, 1314, 1589, 1668, 1739, 1756, 2386
BveI ACCTGC 1 cut(s) 1609
Cac8I GCNNGC 3 cut(s) 910, 2709, 2748
CaiI CAGNNNCTG 1 cut(s) 225
CciI TCATGA 2 cut(s) 91, 2200
Cfr10I RCCGGY 1 cut(s) 62
Cfr13I GGNCC 8 cut(s) 998, 1070, 1586, 1689, 1690, 1915, 2528, 2543
Csp6I GTAC 5 cut(s) 66, 1111, 1320, 1445, 2426
CspAI ACCGGT 1 cut(s) 62
CspCI CAANNNNNGTGG 2 cut(s) 1699, 1734
CviQI GTAC 5 cut(s) 66, 1111, 1320, 1445, 2426
DdeI CTNAG 9 cut(s) 284, 758, 856, 953, 1208, 1268, 1385, 1971, 2378
DriI GACNNNNNGTC 1 cut(s) 529
EaeI YGGCCR 3 cut(s) 654, 1887, 2757
Eam1104I CTCTTC 2 cut(s) 335, 1689
Eam1105I GACNNNNNGTC 1 cut(s) 529
EarI CTCTTC 2 cut(s) 335, 1689
Ecl136II GAGCTC 1 cut(s) 2628
Eco130I CCWWGG 8 cut(s) 651, 1435, 1479, 1538, 1582, 1877, 2008, 2258
Eco24I GRGCYC 2 cut(s) 1693, 2630
Eco32I GATATC 1 cut(s) 2290
Eco47I GGWCC 5 cut(s) 998, 1070, 1915, 2528, 2543
Eco53kI GAGCTC 1 cut(s) 2628
Eco57I CTGAAG 3 cut(s) 316, 1178, 1732
EcoICRI GAGCTC 1 cut(s) 2628
EcoO109I RGGNCCY 2 cut(s) 998, 1690
EcoRII CCWGG 3 cut(s) 188, 1082, 2587
EcoRV GATATC 1 cut(s) 2290
EcoT14I CCWWGG 8 cut(s) 651, 1435, 1479, 1538, 1582, 1877, 2008, 2258
EcoT22I ATGCAT 1 cut(s) 148
EcoT38I GRGCYC 2 cut(s) 1693, 2630
ErhI CCWWGG 8 cut(s) 651, 1435, 1479, 1538, 1582, 1877, 2008, 2258
Esp3I CGTCTC 1 cut(s) 617
FalI AAGNNNNNCTT 2 cut(s) 116, 148
FaqI GGGAC 1 cut(s) 449
FbaI TGATCA 1 cut(s) 2805
FblI GTMKAC 1 cut(s) 1060
Fnu4HI GCNGC 4 cut(s) 223, 226, 906, 1994
FokI GGATG 7 cut(s) 248, 911, 1066, 1468, 1594, 1969, 2727
FriOI GRGCYC 2 cut(s) 1693, 2630
Fsp4HI GCNGC 4 cut(s) 223, 226, 906, 1994
FspBI CTAG 8 cut(s) 399, 578, 840, 971, 1115, 1262, 1490, 2429
GluI GCNGC 4 cut(s) 223, 226, 906, 1994
GsaI CCCAGC 2 cut(s) 947, 1091
GsuI CTGGAG 1 cut(s) 1163
HaeIII GGCC 6 cut(s) 656, 1518, 1588, 1691, 1889, 2759
HapII CCGG 3 cut(s) 63, 2642, 2833
HincII GTYRAC 4 cut(s) 549, 1350, 1546, 2140
HindII GTYRAC 4 cut(s) 549, 1350, 1546, 2140
HindIII AAGCTT 5 cut(s) 130, 875, 1652, 2205, 2271
HpaII CCGG 3 cut(s) 63, 2642, 2833
HphI GGTGA 6 cut(s) 335, 415, 1327, 1478, 1650, 2039
Hpy99I CGWCG 1 cut(s) 535
HpyAV CCTTC 6 cut(s) 356, 537, 2303, 2569, 2664, 2830
HpyCH4III ACNGT 3 cut(s) 483, 1324, 1332
HpyCH4IV ACGT 2 cut(s) 2109, 2801
HpyF10VI GCNNNNNNNGC 4 cut(s) 1313, 1411, 2545, 2756
HpyF3I CTNAG 9 cut(s) 284, 758, 856, 953, 1208, 1268, 1385, 1971, 2378
HpySE526I ACGT 2 cut(s) 2109, 2801
Ksp22I TGATCA 1 cut(s) 2805
LmnI GCTCC 3 cut(s) 329, 1277, 1419
Lsp1109I GCAGC 3 cut(s) 209, 212, 892
LweI GCATC 4 cut(s) 155, 1613, 1890, 2705
MaeI CTAG 8 cut(s) 399, 578, 840, 971, 1115, 1262, 1490, 2429
MaeII ACGT 2 cut(s) 2109, 2801
MaeIII GTNAC 6 cut(s) 24, 248, 495, 695, 732, 2352
MbiI CCGCTC 1 cut(s) 1212
MfeI CAATTG 3 cut(s) 1859, 1891, 2471
MflI RGATCY 3 cut(s) 560, 772, 2602
MhlI GDGCHC 4 cut(s) 1472, 1693, 2630, 2709
MlsI TGGCCA 3 cut(s) 656, 1889, 2759
MluNI TGGCCA 3 cut(s) 656, 1889, 2759
MlyI GAGTC 4 cut(s) 1066, 1858, 2171, 2344
MmeI TCCRAC 2 cut(s) 1596, 2776
Mox20I TGGCCA 3 cut(s) 656, 1889, 2759
Mph1103I ATGCAT 1 cut(s) 148
MroXI GAANNNNTTC 1 cut(s) 1654
MscI TGGCCA 3 cut(s) 656, 1889, 2759
MseI TTAA 8 cut(s) 590, 798, 1122, 1364, 1419, 2223, 2235, 2358
MslI CAYNNNNRTG 1 cut(s) 1307
Msp20I TGGCCA 3 cut(s) 656, 1889, 2759
MspA1I CMGCKG 4 cut(s) 222, 895, 2041, 2482
MspCI CTTAAG 1 cut(s) 1363
MspI CCGG 3 cut(s) 63, 2642, 2833
MspR9I CCNGG 3 cut(s) 190, 1084, 2589
MunI CAATTG 3 cut(s) 1859, 1891, 2471
Mva1269I GAATGC 1 cut(s) 1318
MvaI CCWGG 3 cut(s) 190, 1084, 2589
MvnI CGCG 1 cut(s) 2539
MwoI GCNNNNNNNGC 4 cut(s) 1313, 1411, 2545, 2756
NcoI CCATGG 3 cut(s) 651, 1435, 1582
NlaIV GGNNCC 3 cut(s) 562, 1691, 2045
NmuCI GTSAC 4 cut(s) 248, 495, 695, 2352
NsiI ATGCAT 1 cut(s) 148
NspI RCATGY 1 cut(s) 1579
NspV TTCGAA 1 cut(s) 1777
OliI CACNNNNGTG 1 cut(s) 1307
PagI TCATGA 2 cut(s) 91, 2200
PciI ACATGT 1 cut(s) 1575
PcsI WCGNNNNNNNCGW 1 cut(s) 249
PctI GAATGC 1 cut(s) 1318
PdmI GAANNNNTTC 1 cut(s) 1654
PfoI TCCNGGA 2 cut(s) 188, 2587
PinAI ACCGGT 1 cut(s) 62
PkrI GCNGC 4 cut(s) 224, 227, 907, 1995
PleI GAGTC 4 cut(s) 1065, 1857, 2171, 2343
PpsI GAGTC 4 cut(s) 1065, 1857, 2171, 2343
PpuMI RGGWCCY 1 cut(s) 998
PscI ACATGT 1 cut(s) 1575
PshAI GACNNNNGTC 1 cut(s) 1913
PshBI ATTAAT 1 cut(s) 2223
PsiI TTATAA 2 cut(s) 1128, 1503
Psp124BI GAGCTC 1 cut(s) 2630
Psp1406I AACGTT 1 cut(s) 2801
Psp5II RGGWCCY 1 cut(s) 998
Psp6I CCWGG 3 cut(s) 188, 1082, 2587
PspFI CCCAGC 2 cut(s) 943, 1087
PspGI CCWGG 3 cut(s) 188, 1082, 2587
PspN4I GGNNCC 3 cut(s) 562, 1691, 2045
PspOMI GGGCCC 1 cut(s) 1689
PspPI GGNCC 8 cut(s) 998, 1070, 1586, 1689, 1690, 1915, 2528, 2543
PspPPI RGGWCCY 1 cut(s) 998
PstNI CAGNNNCTG 1 cut(s) 225
PsuI RGATCY 3 cut(s) 560, 772, 2602
PvuII CAGCTG 3 cut(s) 222, 895, 2482
RsaI GTAC 5 cut(s) 67, 1112, 1321, 1446, 2427
RsaNI GTAC 5 cut(s) 66, 1111, 1320, 1445, 2426
RseI CAYNNNNRTG 1 cut(s) 1307
SacI GAGCTC 1 cut(s) 2630
SaqAI TTAA 8 cut(s) 590, 798, 1122, 1364, 1419, 2223, 2235, 2358
SatI GCNGC 4 cut(s) 223, 226, 906, 1994
Sau96I GGNCC 8 cut(s) 998, 1070, 1586, 1689, 1690, 1915, 2528, 2543
ScaI AGTACT 2 cut(s) 1321, 2427
SchI GAGTC 4 cut(s) 1066, 1858, 2171, 2344
ScrFI CCNGG 3 cut(s) 190, 1084, 2589
SduI GDGCHC 4 cut(s) 1472, 1693, 2630, 2709
SfaNI GCATC 4 cut(s) 155, 1613, 1890, 2705
SfuI TTCGAA 1 cut(s) 1777
SinI GGWCC 5 cut(s) 998, 1070, 1915, 2528, 2543
SmiMI CAYNNNNRTG 1 cut(s) 1307
SmlI CTYRAG 9 cut(s) 201, 1135, 1253, 1363, 1714, 1831, 1904, 2293, 2786
SmoI CTYRAG 9 cut(s) 201, 1135, 1253, 1363, 1714, 1831, 1904, 2293, 2786
SpeI ACTAGT 1 cut(s) 1261
SsiI CCGC 9 cut(s) 1212, 1730, 1993, 2041, 2537, 2546, 2598, 2718, 2750
SspMI CTAG 8 cut(s) 399, 578, 840, 971, 1115, 1262, 1490, 2429
SstI GAGCTC 1 cut(s) 2630
StyD4I CCNGG 3 cut(s) 188, 1082, 2587
StyI CCWWGG 8 cut(s) 651, 1435, 1479, 1538, 1582, 1877, 2008, 2258
TaaI ACNGT 3 cut(s) 483, 1324, 1332
TaiI ACGT 2 cut(s) 2112, 2804
TaqI TCGA 6 cut(s) 243, 432, 825, 866, 1055, 1777
TaqII GACCGA 1 cut(s) 2186
TatI WGTACW 2 cut(s) 1319, 2425
TauI GCSGC 1 cut(s) 1996
Tru1I TTAA 8 cut(s) 590, 798, 1122, 1364, 1419, 2223, 2235, 2358
Tru9I TTAA 8 cut(s) 590, 798, 1122, 1364, 1419, 2223, 2235, 2358
TscAI CASTG 7 cut(s) 698, 1314, 1596, 1668, 1739, 1756, 2386
TseFI GTSAC 4 cut(s) 248, 495, 695, 2352
TseI GCWGC 3 cut(s) 222, 225, 905
Tsp45I GTSAC 4 cut(s) 248, 495, 695, 2352
TspDTI ATGAA 9 cut(s) 25, 610, 821, 1344, 1638, 1781, 2217, 2337, 2562
TspGWI ACGGA 2 cut(s) 605, 2782
TspRI CASTG 7 cut(s) 698, 1314, 1596, 1668, 1739, 1756, 2386
Vha464I CTTAAG 1 cut(s) 1363
VpaK11BI GGWCC 5 cut(s) 998, 1070, 1915, 2528, 2543
VspI ATTAAT 1 cut(s) 2223
XapI RAATTY 9 cut(s) 390, 409, 723, 794, 1286, 1640, 2093, 2303, 2687
XbaI TCTAGA 1 cut(s) 970
XceI RCATGY 1 cut(s) 1579
XcmI CCANNNNNNNNNTGG 4 cut(s) 776, 1080, 1455, 2239
XmiI GTMKAC 1 cut(s) 1060
XmnI GAANNNNTTC 1 cut(s) 1654
XspI CTAG 8 cut(s) 399, 578, 840, 971, 1115, 1262, 1490, 2429
ZrmI AGTACT 2 cut(s) 1321, 2427
Zsp2I ATGCAT 1 cut(s) 148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.