RLG00000010252

Leucine rich repeat N-terminal domain

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
64680560 .. 64683496
2937 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010252

Sequence Viewer

Length: 2937 bp
ATGCCTTATTTTTCTGTTGCTCAAGCTTCCCAATGTTCTTCATTTGTGCAGACAATTGGACATGCAGATGAGTGCTCTGCCTTGATGCAATTCAAGCAAAGCTTTACAACAAGCAAGTCTGCATCTTTAGATCCTTTTGCTTATCCCAAGGTTGCATCATGGATGCAAGAAAGGACGAGGAGGAATTGCTGCTCATGGGATGGTGTGGAGTGCAATGAGGAGACTGGCTATGTTATTGGCCTTTACCTCAACAGCAGCTGCCTCTATGGTTCTCTCAACTCCAGCAGCAGCCTTTTCCAATTTGTTCACTTGCAAAAGCTTGATCTCTCAGATAATCACTTCAATTTCTCCAAAATACCATCAAGATTAGGCCATGATCTTACCGGTCTAACACTTCTCAACCTTTCACAGTCCTCATTCTCTGGCCAAATTCCATCAGAAATTTCGTACCTTTCCAAGCTGTCTACCCTTGATCTTTCTGCTACTAGCTTTTTGGATATGACATTCGATTATGATCATTTTTCATCTTCCAAGATTTTGGAACTGACAAATGCCAACCTCAGAAGTATAGTTCAAAATCTAACCAATATACAACAACTTCATCTTAATAAGGTACACATACTCTCCACTTTACCCGATATCTTTGCAAATGCAACTTCTCTCAAAGCTCTGTATCTTCAAAGCTGTGGTTTGTCTGGAGAATTCCCAGTAGGCATTTTTCAGCTACCAAACTTAGAAGTTCTTGATCTGATGTATAATGAAGACTTAACTGGTTACTTTCCTGAATTTAACAAGAGTAGCCCCTTCAAACTGAATGTTGCGAGGACAAATTTCTCTGGTCATGTACCTGCTTCAATTGGAGACCTAAGCTCCTTAGAGTACTTGAACCTCGCATTATGTAATTTTTATCCTCATATTCCATCTTCACTTGGAAACCTTACACAGGTCAGTTACCTTAGCCTTTCTTTCTTTTTCGACCATAGTTACACTTACTACGATGTTTCAAGAAACAGTTTTAGCGGCCAAATTTCTGAGTCCTGGTCTTGGGTTGGAAAGCTAACCAAACTCTACCACTTGAGCCTTGCCTATACCTACTTAAGGGGAGAATTCCCAAGTTTTGTTGCGAACTTGACTCAAATGGAAGAGTTAGACTTGGCCTATAACCAAATCACAGGTCAAATCCCATCTTGGCTTGCCAACTTGACCAAATTAACTGCTCCATACTTCCCATTCAACAATTTGCAAGAAGCAATTCCAAGGTCATTTTTCCAGCTTACAAACCTTCAGTATATTGACCTTTCCTCCAATAACTTGAGTGGAACAGTTGAGTTGGATGAATTTTTCAAGCTCAAAATGTTAACAGTGCTTCGACTTTCGTTCAACAAATTATCTGTGCACATCAAAACCAGTTTGACTGCTACTTCTCCAAAGTTTGAAGCTCTAGCATTGGCGTCATGCAACTTAACAGAGTTTCCAGATTTTTTACACGATAATAGTAAATTGGTGGAGCTAGACCTTTCTGATAACAACATTCATGGCCAAATACCAAGATGGATGTGGAACTCAACTGGTGAATCTCTGTGGTATCTGAACCTCTCCCACAACTCTCTAACAGGATTTGAGCAAAATCCAGTCATTCTTCCATGGAAGAATCTGCATCTTTTAGAGCTTGGATCTAACAGGTTACAAGGGCAATTGCCGATTCCACCCCTATCAATCCAATTTTATTCTGTGCCAAACAATGGTTATACCAGAGGGGTTTCACCATCTTTCTGCAACTTGAAAGATCTGTTTGTTCTTGATTTGTCCAACAACAACCTAAGTGGCATGCTTCCACAATGTTTAGGCAGCTCCAGTGCTTTTGAGATTCTGAAGCTCCGCAACAATTCTTTTCATGGTGATATTCCTGATCAAATGTGTCCAACCGGACAGGGTTCACTAAAGATGGTTGATATGAGCTATAATCAGCTACGGGGAAAGCTACCAAGATCAATGGCAAATTGCACTCAGTTAGAGTTTCTGGATTTCGGAAACAATCACATTAGTGACAGCTTCCCATCATGGCTAGGGACACTTCCGGTCCTAAGGGTACTCATTCTGGGGACTAATGGATTTCATGGCACTATTGGCAAACCTGCAACCAACCATGAGTTCCCAAACCTCTGCATTATTGACCTATCCAACAATGGTTTCTCAAGTTGGTTGCCTTCTGATTACTTAGGGAGCTTGAATTGCATGAAGAAATCTGTTGACCAAGATGAAGTGAAGACCTATTTTCAAGACACCATAACGGTCGCCACGTACACAATCTACCATTATGATTACTCAATGATCATCTTTGGCAAAGGTGTAGAGTTGAAGTATTTGAAGACACCTTATCTTCTCAGGTTCATAGATCTCTCAAATAATAGATTTGAAGGCGTCATTCCTGGTACTATTGGGAATCTAAGAGGGCTTCATTTGCTTAATCTTTCCAACAACACTCTCATTGGTCACATCCCCCCATCTTTAGGGAACTTGTCTGCCCTTGAATCCTTGGATCTCTCTCAAAATCAACTCTCAGGAGAGATCCCCGGCAATTTAGTTGAACTCACTTTCCTTGCATACTTTAATGTATCCCAAAATCACCTTTCAGGCCCTATCCCACATGGGCAACAATTTGATACATTCCAAGAGGATCTGTACAAAGGAAACTCAGGTTTGTGTGGGGAGCCTTTGTTAAAGAAATGTGAAGGTTCTGATAGCTCAAGGTCACTACCATCTTCTGAAGAAGATGAAGACTCCGGGATTCAGGTTGAATTAGATTGGTTTGTGGTTCTGCTGGGAGTTGTAAGTGGGCTAGTAGTTGGAGGGGTTGCCGGGAACACTTTGGGAAACAAGAAGCGTGAATGGTTTGTGAAGACATTCGGCAAGAGGAGGAGGTCTCTAGCGAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

979

Amino Acids

109.25

Weight (kDa)

5.63

Isoelectric Point (pI)

42.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 22 - 72 1e-06 Leucine rich repeat N-terminal domain
LRR_14 PF23598 347 - 534 1.1e-10 Leucine-rich repeat region
LRR_8 PF13855 411 - 463 3.6e-08 Leucine rich repeat
LRR_14 PF23598 778 - 874 2.5e-07 Leucine-rich repeat region
LRR_8 PF13855 795 - 853 1.3e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 856, 2143
AccB7I CCANNNNNTGG 1 cut(s) 1742
AccI GTMKAC 1 cut(s) 464
AciI CCGC 2 cut(s) 1020, 1879
AclWI GGATC 5 cut(s) 125, 1681, 2547, 2563, 2685
AcoI YGGCCR 3 cut(s) 424, 1021, 1537
AcsI RAATTY 8 cut(s) 429, 441, 701, 785, 829, 1026, 1106, 1337
AcuI CTGAAG 3 cut(s) 1268, 1892, 2787
AcyI GRCGYC 2 cut(s) 1451, 2421
AfaI GTAC 8 cut(s) 449, 615, 846, 881, 2091, 2303, 2434, 2684
AfiI CCNNNNNNNGG 5 cut(s) 943, 1044, 1098, 1742, 2510
AflII CTTAAG 1 cut(s) 1096
AgeI ACCGGT 1 cut(s) 383
AjnI CCWGG 2 cut(s) 1037, 2428
AjuI GAANNNNNNNTTGG 4 cut(s) 2135, 2167, 2174, 2206
AleI CACNNNNGTG 1 cut(s) 2043
AloI GAACNNNNNNTCC 2 cut(s) 2580, 2612
Alw21I GWGCWC 2 cut(s) 77, 1398
Alw26I GTCTC 3 cut(s) 215, 855, 2928
Alw44I GTGCAC 1 cut(s) 1394
AlwI GGATC 5 cut(s) 125, 1681, 2547, 2563, 2685
AlwNI CAGNNNCTG 1 cut(s) 258
AoxI GGCC 7 cut(s) 238, 370, 424, 1021, 1155, 1537, 2635
ApaLI GTGCAC 1 cut(s) 1394
ApeKI GCWGC 6 cut(s) 189, 255, 258, 285, 288, 1848
ApoI RAATTY 8 cut(s) 429, 441, 701, 785, 829, 1026, 1106, 1337
ArsI GACNNNNNNTTYG 2 cut(s) 1159, 1191
AsiGI ACCGGT 1 cut(s) 383
Asp700I GAANNNNTTC 2 cut(s) 1251, 2903
AspS9I GGNCC 2 cut(s) 2080, 2636
AsuC2I CCSGG 3 cut(s) 2574, 2785, 2860
AsuHPI GGTGA 4 cut(s) 1583, 1755, 1910, 2618
AvaII GGWCC 1 cut(s) 2080
AxyI CCTNAGG 1 cut(s) 2084
BaeGI GKGCMC 1 cut(s) 1398
BalI TGGCCA 2 cut(s) 426, 1539
BbsI GAAGAC 5 cut(s) 768, 2273, 2375, 2784, 2906
Bbv12I GWGCWC 2 cut(s) 77, 1398
BbvI GCAGC 6 cut(s) 176, 245, 267, 297, 300, 1860
BcgI CGANNNNNNTGC 2 cut(s) 626, 660
BciT130I CCWGG 2 cut(s) 1039, 2430
BciVI GTATCC 1 cut(s) 2626
BclI TGATCA 3 cut(s) 514, 1909, 2331
BcnI CCSGG 3 cut(s) 2574, 2785, 2860
BcoDI GTCTC 3 cut(s) 215, 855, 2928
BfaI CTAG 6 cut(s) 486, 1442, 1511, 2066, 2840, 2927
BfrI CTTAAG 1 cut(s) 1096
BfuAI ACCTGC 2 cut(s) 856, 2143
BfuI GTATCC 1 cut(s) 2626
BglII AGATCT 2 cut(s) 1786, 2395
BisI GCNGC 7 cut(s) 190, 256, 259, 286, 289, 1021, 1849
BlsI GCNGC 7 cut(s) 191, 257, 260, 287, 290, 1022, 1850
BmcAI AGTACT 1 cut(s) 881
Bme1390I CCNGG 5 cut(s) 1039, 2430, 2574, 2785, 2860
Bme18I GGWCC 1 cut(s) 2080
BmgT120I GGNCC 2 cut(s) 2080, 2636
BmiI GGNNCC 1 cut(s) 2712
BmrFI CCNGG 5 cut(s) 1039, 2430, 2574, 2785, 2860
BmrI ACTGGG 1 cut(s) 701
BmsI GCATC 5 cut(s) 75, 131, 153, 164, 1666
BmuI ACTGGG 1 cut(s) 701
BpiI GAAGAC 5 cut(s) 768, 2273, 2375, 2784, 2906
BplI GAGNNNNNCTC 1 cut(s) 2908
BpmI CTGGAG 3 cut(s) 265, 717, 1837
Bpu10I CCTNAGC 2 cut(s) 866, 956
BpuEI CTTGAG 5 cut(s) 6, 1096, 1333, 2179, 2731
BpuMI CCSGG 3 cut(s) 2574, 2785, 2860
BsaAI YACGTR 1 cut(s) 2301
BsaBI GATNNNNATC 1 cut(s) 513
BsaHI GRCGYC 2 cut(s) 1451, 2421
BsaI GGTCTC 2 cut(s) 855, 2928
BsaJI CCNNGG 5 cut(s) 147, 1256, 1643, 2535, 2572
BsaWI WCCGGW 3 cut(s) 383, 1925, 2077
BsaXI ACNNNNNCTCC 8 cut(s) 608, 638, 854, 884, 1286, 1316, 2702, 2732
Bsc4I CCNNNNNNNGG 5 cut(s) 943, 1044, 1098, 1742, 2510
Bse118I RCCGGY 1 cut(s) 383
Bse1I ACTGG 7 cut(s) 229, 707, 775, 1407, 1573, 1631, 1854
Bse21I CCTNAGG 1 cut(s) 2084
Bse3DI GCAATG 1 cut(s) 220
Bse8I GATNNNNATC 1 cut(s) 513
BseBI CCWGG 2 cut(s) 1039, 2430
BseDI CCNNGG 5 cut(s) 147, 1256, 1643, 2535, 2572
BseGI GGATG 5 cut(s) 168, 205, 1339, 1560, 2496
BseJI GATNNNNATC 1 cut(s) 513
BseLI CCNNNNNNNGG 5 cut(s) 943, 1044, 1098, 1742, 2510
BseMI GCAATG 1 cut(s) 220
BseMII CTCAG 7 cut(s) 342, 574, 1023, 2021, 2398, 2574, 2709
BseNI ACTGG 7 cut(s) 229, 707, 775, 1407, 1573, 1631, 1854
BseRI GAGGAG 4 cut(s) 193, 233, 2929, 2932
BseSI GKGCMC 1 cut(s) 1398
BseXI GCAGC 6 cut(s) 176, 245, 267, 297, 300, 1860
BseYI CCCAGC 1 cut(s) 2821
BsgI GTGCAG 1 cut(s) 68
Bsh1285I CGRYCG 1 cut(s) 2295
BshFI GGCC 7 cut(s) 240, 372, 426, 1023, 1157, 1539, 2637
BshTI ACCGGT 1 cut(s) 383
BsiEI CGRYCG 1 cut(s) 2295
BsiHKAI GWGCWC 2 cut(s) 77, 1398
BsiSI CCGG 6 cut(s) 384, 1926, 2078, 2574, 2784, 2859
BslFI GGGAC 2 cut(s) 2083, 2116
BslI CCNNNNNNNGG 5 cut(s) 943, 1044, 1098, 1742, 2510
BsmAI GTCTC 3 cut(s) 215, 855, 2928
BsmFI GGGAC 2 cut(s) 2083, 2116
BsnI GGCC 7 cut(s) 240, 372, 426, 1023, 1157, 1539, 2637
Bso31I GGTCTC 2 cut(s) 855, 2928
Bsp1286I GDGCHC 2 cut(s) 77, 1398
Bsp1407I TGTACA 1 cut(s) 2682
Bsp19I CCATGG 1 cut(s) 1643
BspACI CCGC 2 cut(s) 1020, 1879
BspANI GGCC 7 cut(s) 240, 372, 426, 1023, 1157, 1539, 2637
BspCNI CTCAG 7 cut(s) 341, 573, 1024, 2020, 2397, 2573, 2708
BspLI GGNNCC 1 cut(s) 2712
BspMI ACCTGC 2 cut(s) 856, 2143
BspPI GGATC 5 cut(s) 125, 1681, 2547, 2563, 2685
BspTI CTTAAG 1 cut(s) 1096
BspTNI GGTCTC 2 cut(s) 855, 2928
BsrDI GCAATG 1 cut(s) 220
BsrFI RCCGGY 1 cut(s) 383
BsrGI TGTACA 1 cut(s) 2682
BsrI ACTGG 7 cut(s) 229, 707, 775, 1407, 1573, 1631, 1854
BssAI RCCGGY 1 cut(s) 383
BssECI CCNNGG 5 cut(s) 147, 1256, 1643, 2535, 2572
BssNI GRCGYC 2 cut(s) 1451, 2421
BssT1I CCWWGG 4 cut(s) 147, 1256, 1643, 2535
Bst2UI CCWGG 2 cut(s) 1039, 2430
Bst4CI ACNGT 5 cut(s) 411, 1013, 1324, 1363, 2293
Bst6I CTCTTC 1 cut(s) 1137
BstACI GRCGYC 2 cut(s) 1451, 2421
BstAFI CTTAAG 1 cut(s) 1096
BstAUI TGTACA 1 cut(s) 2682
BstBAI YACGTR 1 cut(s) 2301
BstC8I GCNNGC 2 cut(s) 1194, 1829
BstDSI CCRYGG 1 cut(s) 1643
BstENI CCTNNNNNAGG 2 cut(s) 941, 1096
BstF5I GGATG 5 cut(s) 168, 205, 1339, 1560, 2496
BstMAI GTCTC 3 cut(s) 215, 855, 2928
BstMCI CGRYCG 1 cut(s) 2295
BstMWI GCNNNNNNNGC 4 cut(s) 94, 2127, 2232, 2461
BstNI CCWGG 2 cut(s) 1039, 2430
BstNSI RCATGY 2 cut(s) 65, 1831
BstSCI CCNGG 5 cut(s) 1037, 2428, 2572, 2783, 2858
BstSLI GKGCMC 1 cut(s) 1398
BstV1I GCAGC 6 cut(s) 176, 245, 267, 297, 300, 1860
BstV2I GAAGAC 5 cut(s) 768, 2273, 2375, 2784, 2906
BstX2I RGATCY 7 cut(s) 130, 1673, 1786, 2395, 2539, 2568, 2677
BstXI CCANNNNNNTGG 1 cut(s) 538
BstYI RGATCY 7 cut(s) 130, 1673, 1786, 2395, 2539, 2568, 2677
Bsu36I CCTNAGG 1 cut(s) 2084
BsuI GTATCC 1 cut(s) 2626
BsuRI GGCC 7 cut(s) 240, 372, 426, 1023, 1157, 1539, 2637
BtgI CCRYGG 1 cut(s) 1643
BtsCI GGATG 5 cut(s) 168, 205, 1339, 1560, 2496
BtsIMutI CAGTG 2 cut(s) 1368, 1861
BveI ACCTGC 2 cut(s) 856, 2143
Cac8I GCNNGC 2 cut(s) 1194, 1829
CaiI CAGNNNCTG 1 cut(s) 258
Cfr10I RCCGGY 1 cut(s) 383
Cfr13I GGNCC 2 cut(s) 2080, 2636
CseI GACGC 2 cut(s) 1440, 2410
Csp6I GTAC 8 cut(s) 448, 614, 845, 880, 2090, 2302, 2433, 2683
CspAI ACCGGT 1 cut(s) 383
CspCI CAANNNNNGTGG 2 cut(s) 1804, 1839
CviQI GTAC 8 cut(s) 448, 614, 845, 880, 2090, 2302, 2433, 2683
EaeI YGGCCR 3 cut(s) 424, 1021, 1537
Eam1104I CTCTTC 1 cut(s) 1137
EarI CTCTTC 1 cut(s) 1137
Eco130I CCWWGG 4 cut(s) 147, 1256, 1643, 2535
Eco31I GGTCTC 2 cut(s) 855, 2928
Eco32I GATATC 1 cut(s) 640
Eco47I GGWCC 1 cut(s) 2080
Eco57I CTGAAG 3 cut(s) 1268, 1892, 2787
Eco81I CCTNAGG 1 cut(s) 2084
EcoNI CCTNNNNNAGG 2 cut(s) 941, 1096
EcoO109I RGGNCCY 1 cut(s) 2636
EcoRI GAATTC 2 cut(s) 701, 1106
EcoRII CCWGG 2 cut(s) 1037, 2428
EcoRV GATATC 1 cut(s) 640
EcoT14I CCWWGG 4 cut(s) 147, 1256, 1643, 2535
ErhI CCWWGG 4 cut(s) 147, 1256, 1643, 2535
FalI AAGNNNNNCTT 2 cut(s) 86, 118
FaqI GGGAC 2 cut(s) 2083, 2116
FbaI TGATCA 3 cut(s) 514, 1909, 2331
FblI GTMKAC 1 cut(s) 464
Fnu4HI GCNGC 7 cut(s) 190, 256, 259, 286, 289, 1021, 1849
FokI GGATG 5 cut(s) 175, 212, 1346, 1567, 2483
Fsp4HI GCNGC 7 cut(s) 190, 256, 259, 286, 289, 1021, 1849
FspBI CTAG 6 cut(s) 486, 1442, 1511, 2066, 2840, 2927
GluI GCNGC 7 cut(s) 190, 256, 259, 286, 289, 1021, 1849
GsaI CCCAGC 1 cut(s) 2825
GsuI CTGGAG 3 cut(s) 265, 717, 1837
HaeIII GGCC 7 cut(s) 240, 372, 426, 1023, 1157, 1539, 2637
HapII CCGG 6 cut(s) 384, 1926, 2078, 2574, 2784, 2859
HgaI GACGC 2 cut(s) 1440, 2410
Hin1I GRCGYC 2 cut(s) 1451, 2421
HincII GTYRAC 2 cut(s) 1359, 2251
HindII GTYRAC 2 cut(s) 1359, 2251
HindIII AAGCTT 3 cut(s) 24, 100, 317
HpaI GTTAAC 1 cut(s) 1359
HpaII CCGG 6 cut(s) 384, 1926, 2078, 2574, 2784, 2859
HphI GGTGA 4 cut(s) 1583, 1755, 1910, 2618
Hpy166II GTNNAC 8 cut(s) 307, 465, 616, 1359, 1396, 1937, 2251, 2304
Hpy8I GTNNAC 8 cut(s) 307, 465, 616, 1359, 1396, 1937, 2251, 2304
HpyAV CCTTC 5 cut(s) 814, 1292, 2217, 2411, 2726
HpyCH4III ACNGT 5 cut(s) 411, 1013, 1324, 1363, 2293
HpyCH4IV ACGT 1 cut(s) 2300
HpyF10VI GCNNNNNNNGC 4 cut(s) 94, 2127, 2232, 2461
HpySE526I ACGT 1 cut(s) 2300
Hsp92I GRCGYC 2 cut(s) 1451, 2421
Ksp22I TGATCA 3 cut(s) 514, 1909, 2331
KspAI GTTAAC 1 cut(s) 1359
LmnI GCTCC 7 cut(s) 875, 1222, 1507, 1856, 1881, 2223, 2710
Lsp1109I GCAGC 6 cut(s) 176, 245, 267, 297, 300, 1860
LweI GCATC 5 cut(s) 75, 131, 153, 164, 1666
MaeI CTAG 6 cut(s) 486, 1442, 1511, 2066, 2840, 2927
MaeII ACGT 1 cut(s) 2300
MaeIII GTNAC 7 cut(s) 773, 950, 983, 1683, 2045, 2492, 2751
MfeI CAATTG 3 cut(s) 54, 855, 1694
MflI RGATCY 7 cut(s) 130, 1673, 1786, 2395, 2539, 2568, 2677
MhlI GDGCHC 2 cut(s) 77, 1398
MlsI TGGCCA 2 cut(s) 426, 1539
MluNI TGGCCA 2 cut(s) 426, 1539
MlyI GAGTC 3 cut(s) 1043, 1126, 2774
MmeI TCCRAC 7 cut(s) 1030, 1311, 1833, 1946, 2205, 2499, 2827
Mox20I TGGCCA 2 cut(s) 426, 1539
MroXI GAANNNNTTC 2 cut(s) 1251, 2903
MscI TGGCCA 2 cut(s) 426, 1539
MslI CAYNNNNRTG 2 cut(s) 66, 2043
Msp20I TGGCCA 2 cut(s) 426, 1539
MspA1I CMGCKG 1 cut(s) 258
MspCI CTTAAG 1 cut(s) 1096
MspI CCGG 6 cut(s) 384, 1926, 2078, 2574, 2784, 2859
MspR9I CCNGG 5 cut(s) 1039, 2430, 2574, 2785, 2860
MunI CAATTG 3 cut(s) 54, 855, 1694
MvaI CCWGG 2 cut(s) 1039, 2430
MwoI GCNNNNNNNGC 4 cut(s) 94, 2127, 2232, 2461
NciI CCSGG 3 cut(s) 2574, 2785, 2860
NcoI CCATGG 1 cut(s) 1643
NlaIV GGNNCC 1 cut(s) 2712
NmuCI GTSAC 3 cut(s) 2045, 2492, 2751
NspI RCATGY 2 cut(s) 65, 1831
OliI CACNNNNGTG 1 cut(s) 2043
PaeI GCATGC 1 cut(s) 1831
PcsI WCGNNNNNNNCGW 1 cut(s) 2297
PdmI GAANNNNTTC 2 cut(s) 1251, 2903
PfeI GAWTC 7 cut(s) 1574, 1651, 1702, 1867, 2443, 2531, 2788
PflMI CCANNNNNTGG 1 cut(s) 1742
PfoI TCCNGGA 1 cut(s) 2783
PinAI ACCGGT 1 cut(s) 383
PkrI GCNGC 7 cut(s) 191, 257, 260, 287, 290, 1022, 1850
PleI GAGTC 3 cut(s) 1042, 1126, 2774
PpsI GAGTC 3 cut(s) 1042, 1126, 2774
Ppu21I YACGTR 1 cut(s) 2301
Psp6I CCWGG 2 cut(s) 1037, 2428
PspFI CCCAGC 1 cut(s) 2821
PspGI CCWGG 2 cut(s) 1037, 2428
PspN4I GGNNCC 1 cut(s) 2712
PspPI GGNCC 2 cut(s) 2080, 2636
PstNI CAGNNNCTG 1 cut(s) 258
PsuI RGATCY 7 cut(s) 130, 1673, 1786, 2395, 2539, 2568, 2677
PvuII CAGCTG 1 cut(s) 258
RsaI GTAC 8 cut(s) 449, 615, 846, 881, 2091, 2303, 2434, 2684
RsaNI GTAC 8 cut(s) 448, 614, 845, 880, 2090, 2302, 2433, 2683
RseI CAYNNNNRTG 2 cut(s) 66, 2043
SatI GCNGC 7 cut(s) 190, 256, 259, 286, 289, 1021, 1849
Sau96I GGNCC 2 cut(s) 2080, 2636
ScaI AGTACT 1 cut(s) 881
SchI GAGTC 3 cut(s) 1043, 1126, 2774
ScrFI CCNGG 5 cut(s) 1039, 2430, 2574, 2785, 2860
SduI GDGCHC 2 cut(s) 77, 1398
SfaNI GCATC 5 cut(s) 75, 131, 153, 164, 1666
SinI GGWCC 1 cut(s) 2080
SmiMI CAYNNNNRTG 2 cut(s) 66, 2043
SmlI CTYRAG 6 cut(s) 21, 1075, 1096, 1312, 2194, 2746
SmoI CTYRAG 6 cut(s) 21, 1075, 1096, 1312, 2194, 2746
SphI GCATGC 1 cut(s) 1831
SsiI CCGC 2 cut(s) 1020, 1879
SspMI CTAG 6 cut(s) 486, 1442, 1511, 2066, 2840, 2927
StyD4I CCNGG 5 cut(s) 1037, 2428, 2572, 2783, 2858
StyI CCWWGG 4 cut(s) 147, 1256, 1643, 2535
TaaI ACNGT 5 cut(s) 411, 1013, 1324, 1363, 2293
TaiI ACGT 1 cut(s) 2303
TaqI TCGA 3 cut(s) 507, 975, 1369
TatI WGTACW 2 cut(s) 879, 2682
TauI GCSGC 1 cut(s) 1023
TfiI GAWTC 7 cut(s) 1574, 1651, 1702, 1867, 2443, 2531, 2788
TscAI CASTG 2 cut(s) 1368, 1861
TseFI GTSAC 3 cut(s) 2045, 2492, 2751
TseI GCWGC 6 cut(s) 189, 255, 258, 285, 288, 1848
Tsp45I GTSAC 3 cut(s) 2045, 2492, 2751
TspRI CASTG 2 cut(s) 1368, 1861
Van91I CCANNNNNTGG 1 cut(s) 1742
Vha464I CTTAAG 1 cut(s) 1096
VneI GTGCAC 1 cut(s) 1394
VpaK11BI GGWCC 1 cut(s) 2080
XagI CCTNNNNNAGG 2 cut(s) 941, 1096
XapI RAATTY 8 cut(s) 429, 441, 701, 785, 829, 1026, 1106, 1337
XceI RCATGY 2 cut(s) 65, 1831
XcmI CCANNNNNNNNNTGG 1 cut(s) 1554
XmiI GTMKAC 1 cut(s) 464
XmnI GAANNNNTTC 2 cut(s) 1251, 2903
XspI CTAG 6 cut(s) 486, 1442, 1511, 2066, 2840, 2927
ZrmI AGTACT 1 cut(s) 881
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.