Rroxscaffold_3G00218210

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000024
Physical Location & Seq
Reverse (-)
285024 .. 289800
4777 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00218210.1

Sequence Viewer

Length: 2325 bp
ATGTTTATCCTTTCAAAACTTTTCTTGTCACATCTTGTGGTGGCGGACTCTTTGCAGTCATATACTCCTCCTTGTCATGATGACGAGATCTCTGCATTGCTGCAATTCAAGCAAAGCTTTGACATTAACATGTCTGCTTCAGATTATGAGGGTGCTTATCCAAAGACTTCTTCATGGAAATCAAATAGCAATTGTTGCTCATGGGACGGGGTCGAGTGTAATGAGGAGACTCGTCATGTGATTGGACTTAATCTTAGTAGCAGTTGTCTCTATGGCTTTATCAACTCCAATAGCACCCTCTTCCGCCTTGTTCATCTTGAGAGCCTCAACCTTGCTGACAATGATTTCGTTTCCTCTCAAATTCCTCCTACCATTAGGAACTTTTCAAAGCTCAGGTATCTCAACCTTTCTTACTCTGTCTTTTCTGGTCAAGTCCCATCTGAAGTTTCACAACTGACCAAGTTGTCATCCCTTGACATGTCTGACAATGATGAGATGTTTTCAAATAAAGGATTTTTGAGAAGCCTAGATCAAAACTTAACTGGCCTAGAAAAGCTTCATCTTTCTTCCATTATTATATCATCTAGAGGAGAGATTCCTGAGTCATTACTCAATGTAGCAAGTCTCAAGAGACTTTTTCTAGCTTATAATAATCTCAGTGGTACAGTGGAGTTCCTCAAGTTTCTTAAGCTACCAAATTTAAAGTGGGTAGATCTATCTGGTAACAACTTAGATGTGATCACTGAAACCAGAACTATGAATGCATCTAGCATTGCAAGGTTAAAGTATCTAGATTTGGGTTCGTGCAACATAAGTGAGTTCCCAAATTTTCTAAGATATCAAGATACATTAAAGTACTTGAACCTTTCTTGGAACGGAATGCATGGCCAAGTACCGAAATGGATGTGGAACACAAGCAGAGAGTCTTTGGTGTATTTGGACATTTCTCATAACCTCCTTTCAGGCTTTGAACAGCCTCCTGTTGTCCTTCCCTGGGTTAAACTAGATGGGCTAGATCTTTCATTCAACAGGCTTAGTGGGCCATTGTTGGTACCTTCCTTACAAGGCATCAGATTCTATAGCATTTCAAACAACAAATTAACTGGAGAAATTTCACCTTTGATTTGTAATGCGAGTTCTCTTTATTCCCTTGATGTGTCAAATAACAGTTTGAGTGGTATGCTTCCGCGGTGTCTGGAAAACTCAAGTAGTCTTGGAGTTTTAAGTGCTGGATACAATTATTTTCATGGCACTCTTCCTCATTTATGCCCCACCAATGGAAGCGAGTTGGTACTGATTGATGTCAGTCATAACCAACTGCAGGGGAAATTACCGAGGTCATTAGCGAATTGTTCGTGGCTCAAGTCTCTCGTTCTGTCAAGCAATAAGTTCGATGATGTGTTCCCCGTTTGGTTGGGAACTCTTCCAGAATTGAAAATTTTGGCAATGAGGAATAGTGGGTTCCACGGTGCTATTCCGAGACTTCAAAGCAATCATGACGGTTTCCCCAATTTGCGCATCCTTGATCTGTCTCAAAATAATTTTACCGGTCAGTTTGCATTTGAATTCATCCTCTCTGGAAAACCAATGAGAGGTATCCATCTAAACGAATCGGAGTACATGGCAGCACTTGAATTCGGAATTGAATTCGCAGCTTATGTTGAAGTCATGGGTATGCACTTTGCTTTTTCCATTTATGAGCCCTCAATCACGCTGATGAATAAAGGTTTAGAGAGATACTTCCAAAAGATTCCTGAAGACTTTATGGCCATCGATCTGTCGAGCAATAAATTTGAAGGCAAGATTCCAGAATTTCTTGGGAACCTAAAGGGGCTTCGCTCACTTAATGTATCCAGTAACATTCTAAGTGGCCGCATCCCACCATCCTTGGGAAACTTGACAAATCTGGAAGCTCTGGACCTTTCACATAACAACTTCTTGGGTGAGATCCCTCCATCACTGTTGCATCTTGCATCCCTCCAAATTTTCAGCGTCTCGCTCAACAATCTCACAGGTCAAATACCGGTTGGAAACCAGTTTAATACCTTCGACAACACTTATTATGAGGGAAACCCAGGTTTGTGTGGATTTCCATTGCCAAAGAAATGTTCACGTTCTGAGGAGGGGCCTGAACTTCCACCTTCGACAGCAGAAGAAGATGGAGTTGAATTGGATTGGAAATTTGCTGCAGCGGGGTTAGTGAGTGGATTGGCGGTGGGAGTGGTTCTTGCAGACTTTGTGATCGCGAGGTTTAGTGAGCGGTTCATTCAGATTGTTGCATTGCTGATCAGACTGATGAAAAGGATGAGAAGGCCCAGAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8

Protein Analysis

774

Amino Acids

86.22

Weight (kDa)

5.79

Isoelectric Point (pI)

43.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 26 - 74 1e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 103 - 315 1.3e-09 Leucine-rich repeat region
LRR_8 PF13855 590 - 646 3.2e-06 Leucine rich repeat
LRR_4 PF12799 611 - 652 8.2e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 648
AasI GACNNNNNNGTC 1 cut(s) 463
Acc16I TGCGCA 1 cut(s) 1517
Acc65I GGTACC 1 cut(s) 1051
AccB1I GGYRCC 1 cut(s) 1051
AccBSI CCGCTC 1 cut(s) 2260
AccII CGCG 2 cut(s) 1189, 2246
AciI CCGC 8 cut(s) 44, 304, 1187, 1189, 1873, 2192, 2213, 2260
AclWI GGATC 1 cut(s) 1942
AcoI YGGCCR 3 cut(s) 886, 1767, 1870
AcuI CTGAAG 3 cut(s) 123, 462, 1776
AfaI GTAC 6 cut(s) 664, 857, 894, 1053, 1293, 1619
AfiI CCNNNNNNNGG 5 cut(s) 994, 1277, 1321, 1592, 1889
AflII CTTAAG 1 cut(s) 686
AflIII ACRYGT 2 cut(s) 129, 477
AgeI ACCGGT 2 cut(s) 1547, 2023
AjnI CCWGG 2 cut(s) 992, 2074
AjuI GAANNNNNNNTTGG 4 cut(s) 154, 186, 2092, 2124
AluBI AGCT 7 cut(s) 117, 391, 556, 644, 691, 1655, 1913
AluI AGCT 7 cut(s) 117, 391, 556, 644, 691, 1655, 1913
Alw26I GTCTC 8 cut(s) 221, 272, 625, 629, 1371, 1474, 1536, 1999
AlwI GGATC 1 cut(s) 1942
AoxI GGCC 7 cut(s) 544, 886, 1040, 1767, 1870, 2126, 2312
ApeKI GCWGC 5 cut(s) 100, 1625, 1652, 2186, 2189
ArsI GACNNNNNNTTYG 2 cut(s) 329, 361
AsiGI ACCGGT 2 cut(s) 1547, 2023
Asp700I GAANNNNTTC 1 cut(s) 555
Asp718I GGTACC 1 cut(s) 1051
AspLEI GCGC 1 cut(s) 1518
AspS9I GGNCC 4 cut(s) 1040, 1918, 2126, 2313
AsuHPI GGTGA 2 cut(s) 1107, 1955
AvaII GGWCC 1 cut(s) 1918
BalI TGGCCA 2 cut(s) 888, 1769
BanI GGYRCC 1 cut(s) 1051
BanII GRGCYC 1 cut(s) 1704
BbsI GAAGAC 1 cut(s) 1764
BbvI GCAGC 5 cut(s) 87, 1637, 1664, 2173, 2201
BccI CCATC 7 cut(s) 445, 1001, 1608, 1778, 1891, 1963, 2153
BcgI CGANNNNNNTGC 4 cut(s) 74, 108, 1372, 1406
BciT130I CCWGG 2 cut(s) 994, 2076
BciVI GTATCC 3 cut(s) 1226, 1607, 1861
BclI TGATCA 2 cut(s) 738, 2286
BcoDI GTCTC 8 cut(s) 221, 272, 625, 629, 1371, 1474, 1536, 1999
BfaI CTAG 8 cut(s) 527, 548, 585, 641, 768, 791, 1004, 1013
BfmI CTRYAG 3 cut(s) 1078, 1319, 2187
BfrI CTTAAG 1 cut(s) 686
BfuI GTATCC 3 cut(s) 1226, 1607, 1861
BglII AGATCT 3 cut(s) 87, 712, 1015
BisI GCNGC 6 cut(s) 101, 1626, 1653, 1873, 2187, 2190
BlsI GCNGC 6 cut(s) 102, 1627, 1654, 1874, 2188, 2191
BmcAI AGTACT 1 cut(s) 857
Bme1390I CCNGG 2 cut(s) 994, 2076
Bme18I GGWCC 1 cut(s) 1918
BmgT120I GGNCC 4 cut(s) 1040, 1918, 2126, 2313
BmiI GGNNCC 4 cut(s) 1053, 1463, 1823, 2127
BmrFI CCNGG 2 cut(s) 994, 2076
BmsI GCATC 6 cut(s) 773, 1077, 1527, 1884, 1975, 1982
BpiI GAAGAC 1 cut(s) 1764
BpmI CTGGAG 1 cut(s) 1125
Bpu10I CCTNAGC 1 cut(s) 392
BpuEI CTTGAG 5 cut(s) 338, 611, 662, 1189, 1346
Bsa29I ATCGAT 1 cut(s) 1773
BsaJI CCNNGG 7 cut(s) 992, 993, 1187, 1334, 1465, 1887, 2074
BsaWI WCCGGW 2 cut(s) 1547, 2023
Bsc4I CCNNNNNNNGG 5 cut(s) 994, 1277, 1321, 1592, 1889
Bse118I RCCGGY 2 cut(s) 1547, 2023
Bse1I ACTGG 4 cut(s) 547, 1108, 1854, 2035
Bse3DI GCAATG 5 cut(s) 95, 771, 1452, 2093, 2279
BseBI CCWGG 2 cut(s) 994, 2076
BseCI ATCGAT 1 cut(s) 1773
BseDI CCNNGG 7 cut(s) 992, 993, 1187, 1334, 1465, 1887, 2074
BseGI GGATG 8 cut(s) 467, 909, 1518, 1569, 1875, 1883, 1973, 2310
BseLI CCNNNNNNNGG 5 cut(s) 994, 1277, 1321, 1592, 1889
BseMI GCAATG 5 cut(s) 95, 771, 1452, 2093, 2279
BseMII CTCAG 4 cut(s) 406, 591, 670, 2109
BseNI ACTGG 4 cut(s) 547, 1108, 1854, 2035
BseRI GAGGAG 4 cut(s) 57, 239, 603, 2135
BseXI GCAGC 5 cut(s) 87, 1637, 1664, 2173, 2201
Bsh1236I CGCG 2 cut(s) 1189, 2246
BshFI GGCC 7 cut(s) 546, 888, 1042, 1769, 1872, 2128, 2314
BshNI GGYRCC 1 cut(s) 1051
BshTI ACCGGT 2 cut(s) 1547, 2023
BshVI ATCGAT 1 cut(s) 1773
BsiSI CCGG 2 cut(s) 1548, 2024
BslFI GGGAC 2 cut(s) 218, 419
BslI CCNNNNNNNGG 5 cut(s) 994, 1277, 1321, 1592, 1889
BsmAI GTCTC 8 cut(s) 221, 272, 625, 629, 1371, 1474, 1536, 1999
BsmBI CGTCTC 1 cut(s) 1999
BsmFI GGGAC 2 cut(s) 218, 419
BsmI GAATGC 2 cut(s) 766, 885
BsnI GGCC 7 cut(s) 546, 888, 1042, 1769, 1872, 2128, 2314
Bsp1286I GDGCHC 1 cut(s) 1704
Bsp68I TCGCGA 1 cut(s) 2246
BspACI CCGC 8 cut(s) 44, 304, 1187, 1189, 1873, 2192, 2213, 2260
BspANI GGCC 7 cut(s) 546, 888, 1042, 1769, 1872, 2128, 2314
BspCNI CTCAG 4 cut(s) 405, 592, 669, 2110
BspDI ATCGAT 1 cut(s) 1773
BspFNI CGCG 2 cut(s) 1189, 2246
BspHI TCATGA 2 cut(s) 76, 1495
BspLI GGNNCC 4 cut(s) 1053, 1463, 1823, 2127
BspMAI CTGCAG 2 cut(s) 1323, 2191
BspPI GGATC 1 cut(s) 1942
BspT107I GGYRCC 1 cut(s) 1051
BspTI CTTAAG 1 cut(s) 686
BsrBI CCGCTC 1 cut(s) 2260
BsrDI GCAATG 5 cut(s) 95, 771, 1452, 2093, 2279
BsrFI RCCGGY 2 cut(s) 1547, 2023
BsrI ACTGG 4 cut(s) 547, 1108, 1854, 2035
BssAI RCCGGY 2 cut(s) 1547, 2023
BssECI CCNNGG 7 cut(s) 992, 993, 1187, 1334, 1465, 1887, 2074
BssT1I CCWWGG 1 cut(s) 1887
Bst2UI CCWGG 2 cut(s) 994, 2076
Bst4CI ACNGT 5 cut(s) 667, 1169, 1469, 1502, 1962
Bst6I CTCTTC 3 cut(s) 305, 1260, 1428
BstAFI CTTAAG 1 cut(s) 686
BstAPI GCANNNNNTGC 1 cut(s) 195
BstDEI CTNAG 9 cut(s) 254, 392, 600, 656, 730, 833, 1034, 1865, 2118
BstDSI CCRYGG 2 cut(s) 1187, 1465
BstF5I GGATG 8 cut(s) 467, 909, 1518, 1569, 1875, 1883, 1973, 2310
BstFNI CGCG 2 cut(s) 1189, 2246
BstHHI GCGC 1 cut(s) 1518
BstMAI GTCTC 8 cut(s) 221, 272, 625, 629, 1371, 1474, 1536, 1999
BstMWI GCNNNNNNNGC 3 cut(s) 109, 195, 1039
BstNI CCWGG 2 cut(s) 994, 2076
BstNSI RCATGY 2 cut(s) 133, 481
BstSCI CCNGG 2 cut(s) 992, 2074
BstSFI CTRYAG 3 cut(s) 1078, 1319, 2187
BstUI CGCG 2 cut(s) 1189, 2246
BstV1I GCAGC 5 cut(s) 87, 1637, 1664, 2173, 2201
BstV2I GAAGAC 1 cut(s) 1764
BstX2I RGATCY 4 cut(s) 87, 712, 1015, 1947
BstYI RGATCY 4 cut(s) 87, 712, 1015, 1947
Bsu15I ATCGAT 1 cut(s) 1773
BsuI GTATCC 3 cut(s) 1226, 1607, 1861
BsuRI GGCC 7 cut(s) 546, 888, 1042, 1769, 1872, 2128, 2314
BsuTUI ATCGAT 1 cut(s) 1773
BtgI CCRYGG 2 cut(s) 1187, 1465
BtsCI GGATG 8 cut(s) 467, 909, 1518, 1569, 1875, 1883, 1973, 2310
BtsIMutI CAGTG 4 cut(s) 664, 672, 741, 1958
BtuMI TCGCGA 1 cut(s) 2246
CciI TCATGA 2 cut(s) 76, 1495
CfoI GCGC 1 cut(s) 1518
Cfr10I RCCGGY 2 cut(s) 1547, 2023
Cfr13I GGNCC 4 cut(s) 1040, 1918, 2126, 2313
Cfr42I CCGCGG 1 cut(s) 1190
ClaI ATCGAT 1 cut(s) 1773
CseI GACGC 1 cut(s) 1981
Csp6I GTAC 6 cut(s) 663, 856, 893, 1052, 1292, 1618
CspAI ACCGGT 2 cut(s) 1547, 2023
CspCI CAANNNNNGTGG 2 cut(s) 1869, 1904
CviQI GTAC 6 cut(s) 663, 856, 893, 1052, 1292, 1618
DdeI CTNAG 9 cut(s) 254, 392, 600, 656, 730, 833, 1034, 1865, 2118
DraI TTTAAA 1 cut(s) 702
DrdI GACNNNNNNGTC 1 cut(s) 463
DseDI GACNNNNNNGTC 1 cut(s) 463
EaeI YGGCCR 3 cut(s) 886, 1767, 1870
Eam1104I CTCTTC 3 cut(s) 305, 1260, 1428
EarI CTCTTC 3 cut(s) 305, 1260, 1428
EciI GGCGGA 2 cut(s) 59, 293
Eco130I CCWWGG 1 cut(s) 1887
Eco24I GRGCYC 1 cut(s) 1704
Eco32I GATATC 1 cut(s) 839
Eco47I GGWCC 1 cut(s) 1918
Eco57I CTGAAG 3 cut(s) 123, 462, 1776
EcoO109I RGGNCCY 1 cut(s) 2126
EcoRI GAATTC 3 cut(s) 1565, 1634, 1646
EcoRII CCWGG 2 cut(s) 992, 2074
EcoRV GATATC 1 cut(s) 839
EcoT14I CCWWGG 1 cut(s) 1887
EcoT22I ATGCAT 2 cut(s) 766, 885
EcoT38I GRGCYC 1 cut(s) 1704
ErhI CCWWGG 1 cut(s) 1887
Esp3I CGTCTC 1 cut(s) 1999
FalI AAGNNNNNCTT 2 cut(s) 101, 133
FaqI GGGAC 2 cut(s) 218, 419
FauI CCCGC 1 cut(s) 2185
FbaI TGATCA 2 cut(s) 738, 2286
Fnu4HI GCNGC 6 cut(s) 101, 1626, 1653, 1873, 2187, 2190
FokI GGATG 8 cut(s) 454, 916, 1505, 1556, 1862, 1870, 1960, 2317
FriOI GRGCYC 1 cut(s) 1704
Fsp4HI GCNGC 6 cut(s) 101, 1626, 1653, 1873, 2187, 2190
FspBI CTAG 8 cut(s) 527, 548, 585, 641, 768, 791, 1004, 1013
FspI TGCGCA 1 cut(s) 1517
GlaI GCGC 1 cut(s) 1517
GluI GCNGC 6 cut(s) 101, 1626, 1653, 1873, 2187, 2190
GsuI CTGGAG 1 cut(s) 1125
HaeIII GGCC 7 cut(s) 546, 888, 1042, 1769, 1872, 2128, 2314
HapII CCGG 2 cut(s) 1548, 2024
HgaI GACGC 1 cut(s) 1981
HhaI GCGC 1 cut(s) 1518
Hin6I GCGC 1 cut(s) 1516
HinP1I GCGC 1 cut(s) 1516
HindIII AAGCTT 2 cut(s) 115, 554
HinfI GANTC 9 cut(s) 47, 229, 595, 602, 923, 1074, 1610, 1750, 1804
HpaII CCGG 2 cut(s) 1548, 2024
HphI GGTGA 2 cut(s) 1107, 1955
Hpy166II GTNNAC 1 cut(s) 2111
Hpy8I GTNNAC 1 cut(s) 2111
HpyAV CCTTC 6 cut(s) 998, 1065, 1790, 2056, 2151, 2304
HpyCH4III ACNGT 5 cut(s) 667, 1169, 1469, 1502, 1962
HpyCH4IV ACGT 1 cut(s) 2113
HpyF10VI GCNNNNNNNGC 3 cut(s) 109, 195, 1039
HpyF3I CTNAG 9 cut(s) 254, 392, 600, 656, 730, 833, 1034, 1865, 2118
HpySE526I ACGT 1 cut(s) 2113
HspAI GCGC 1 cut(s) 1516
KpnI GGTACC 1 cut(s) 1055
Ksp22I TGATCA 2 cut(s) 738, 2286
KspI CCGCGG 1 cut(s) 1190
Lsp1109I GCAGC 5 cut(s) 87, 1637, 1664, 2173, 2201
LweI GCATC 6 cut(s) 773, 1077, 1527, 1884, 1975, 1982
MaeI CTAG 8 cut(s) 527, 548, 585, 641, 768, 791, 1004, 1013
MaeII ACGT 1 cut(s) 2113
MaeIII GTNAC 3 cut(s) 27, 722, 1856
MbiI CCGCTC 1 cut(s) 2260
MboII GAAGA 8 cut(s) 162, 292, 558, 1247, 1415, 1769, 2165, 2168
MfeI CAATTG 1 cut(s) 190
MflI RGATCY 4 cut(s) 87, 712, 1015, 1947
MhlI GDGCHC 1 cut(s) 1704
MlsI TGGCCA 2 cut(s) 888, 1769
MluNI TGGCCA 2 cut(s) 888, 1769
MlyI GAGTC 4 cut(s) 41, 223, 611, 932
MmeI TCCRAC 1 cut(s) 2008
Mox20I TGGCCA 2 cut(s) 888, 1769
Mph1103I ATGCAT 2 cut(s) 766, 885
MroXI GAANNNNTTC 1 cut(s) 555
MscI TGGCCA 2 cut(s) 888, 1769
MslI CAYNNNNRTG 3 cut(s) 128, 1673, 1715
Msp20I TGGCCA 2 cut(s) 888, 1769
MspA1I CMGCKG 2 cut(s) 1189, 2192
MspCI CTTAAG 1 cut(s) 686
MspI CCGG 2 cut(s) 1548, 2024
MspR9I CCNGG 2 cut(s) 994, 2076
MunI CAATTG 1 cut(s) 190
Mva1269I GAATGC 2 cut(s) 766, 885
MvaI CCWGG 2 cut(s) 994, 2076
MvnI CGCG 2 cut(s) 1189, 2246
MwoI GCNNNNNNNGC 3 cut(s) 109, 195, 1039
NlaIV GGNNCC 4 cut(s) 1053, 1463, 1823, 2127
NmuCI GTSAC 1 cut(s) 27
NruI TCGCGA 1 cut(s) 2246
NsbI TGCGCA 1 cut(s) 1517
NsiI ATGCAT 2 cut(s) 766, 885
NspI RCATGY 2 cut(s) 133, 481
PagI TCATGA 2 cut(s) 76, 1495
PasI CCCWGGG 1 cut(s) 993
PciI ACATGT 2 cut(s) 129, 477
PctI GAATGC 2 cut(s) 766, 885
PdmI GAANNNNTTC 1 cut(s) 555
PfeI GAWTC 5 cut(s) 595, 1074, 1610, 1750, 1804
PflFI GACNNNGTC 1 cut(s) 209
PinAI ACCGGT 2 cut(s) 1547, 2023
PkrI GCNGC 6 cut(s) 102, 1627, 1654, 1874, 2188, 2191
PleI GAGTC 4 cut(s) 41, 223, 610, 931
PpsI GAGTC 4 cut(s) 41, 223, 610, 931
PscI ACATGT 2 cut(s) 129, 477
PsiI TTATAA 1 cut(s) 648
Psp6I CCWGG 2 cut(s) 992, 2074
PspGI CCWGG 2 cut(s) 992, 2074
PspN4I GGNNCC 4 cut(s) 1053, 1463, 1823, 2127
PspPI GGNCC 4 cut(s) 1040, 1918, 2126, 2313
PsrI GAACNNNNNNTAC 2 cut(s) 1120, 1152
PstI CTGCAG 2 cut(s) 1323, 2191
PsuI RGATCY 4 cut(s) 87, 712, 1015, 1947
PsyI GACNNNGTC 1 cut(s) 209
RruI TCGCGA 1 cut(s) 2246
RsaI GTAC 6 cut(s) 664, 857, 894, 1053, 1293, 1619
RsaNI GTAC 6 cut(s) 663, 856, 893, 1052, 1292, 1618
RseI CAYNNNNRTG 3 cut(s) 128, 1673, 1715
SacII CCGCGG 1 cut(s) 1190
SatI GCNGC 6 cut(s) 101, 1626, 1653, 1873, 2187, 2190
Sau96I GGNCC 4 cut(s) 1040, 1918, 2126, 2313
ScaI AGTACT 1 cut(s) 857
SchI GAGTC 4 cut(s) 41, 223, 611, 932
ScrFI CCNGG 2 cut(s) 994, 2076
SduI GDGCHC 1 cut(s) 1704
SfaNI GCATC 6 cut(s) 773, 1077, 1527, 1884, 1975, 1982
SfcI CTRYAG 3 cut(s) 1078, 1319, 2187
Sfr303I CCGCGG 1 cut(s) 1190
SgrBI CCGCGG 1 cut(s) 1190
SinI GGWCC 1 cut(s) 1918
SmiMI CAYNNNNRTG 3 cut(s) 128, 1673, 1715
SmlI CTYRAG 6 cut(s) 317, 626, 677, 686, 1204, 1361
SmoI CTYRAG 6 cut(s) 317, 626, 677, 686, 1204, 1361
SsiI CCGC 8 cut(s) 44, 304, 1187, 1189, 1873, 2192, 2213, 2260
SspMI CTAG 8 cut(s) 527, 548, 585, 641, 768, 791, 1004, 1013
StyD4I CCNGG 2 cut(s) 992, 2074
StyI CCWWGG 1 cut(s) 1887
TaaI ACNGT 5 cut(s) 667, 1169, 1469, 1502, 1962
TaiI ACGT 1 cut(s) 2116
TaqI TCGA 6 cut(s) 213, 1392, 1773, 1781, 2049, 2144
TatI WGTACW 2 cut(s) 855, 1617
TauI GCSGC 1 cut(s) 1875
TfiI GAWTC 5 cut(s) 595, 1074, 1610, 1750, 1804
TscAI CASTG 4 cut(s) 664, 672, 748, 1965
TseFI GTSAC 1 cut(s) 27
TseI GCWGC 5 cut(s) 100, 1625, 1652, 2186, 2189
Tsp45I GTSAC 1 cut(s) 27
TspGWI ACGGA 1 cut(s) 891
TspRI CASTG 4 cut(s) 664, 672, 748, 1965
Tth111I GACNNNGTC 1 cut(s) 209
Vha464I CTTAAG 1 cut(s) 686
VpaK11BI GGWCC 1 cut(s) 1918
XbaI TCTAGA 2 cut(s) 584, 790
XceI RCATGY 2 cut(s) 133, 481
XcmI CCANNNNNNNNNTGG 1 cut(s) 702
XmnI GAANNNNTTC 1 cut(s) 555
XspI CTAG 8 cut(s) 527, 548, 585, 641, 768, 791, 1004, 1013
ZrmI AGTACT 1 cut(s) 857
Zsp2I ATGCAT 2 cut(s) 766, 885
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.