Rw6G007770

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000024
Physical Location & Seq
Reverse (-)
12898697 .. 12901728
3032 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G007770.1

Sequence Viewer

Length: 3030 bp
ATGATCAAAACATCAATTATGGGGCTATCACTGAACTTGTGGAATAGTCGCATGCTTTCGAAACGAGTAATTCTCTTCATGTTTCATATCTTGGTTATTGCCAAATCTTTACACTGCTCTCTGCAGCAGCCATCATCTTCCTGCCATGACGAGGAGAACTTCGCCTTGCTCCAGTTTAAGCAAAGCTTTGTCATCAACGAATCTGCTTCTGTTGGTGAGGGTGCTTATCCAAAGGTTTTGTCATGGAAACCAGCTGCTGCTAAAGGATGCTGCTCATGGGACGGGGTCGAGTGTGATGAGAAGACAGGTCATGTGATTGGACTTGATCTTAGTAGTAGCTGTCTCTCCGGCTTTATCAGCTCCAACAACACCCTCTTCCACCTTGTTTATCTTCAGAGCCTGAACCTTGCCGACAATGACTTCAATCAATCTCAAATTCCTACTACCATCAGGAATTTTCCAATGCTCCGTTATCTTAACCTTTCTGGCAGTTTCTTTTCTGGTCAAATCCCATCTGAAATTTCTCACTTGCCCAAATTGTTGTCGCTGGATCTATCCTCCAGTATTTATAGGAGTAACGGTGAAAGATCACTGAAGCTAAACCAGTCTGATCTAAGAAGGCTAGTTCAAAACTTAACCAGACTAGAAAAGCTTCATCTCAGCTCCGTCACCATTTCTGCACCAGTACCCGATTCCATGGCAAATTTATCATTACTGACATCTCTCCTCCTAGAGAATTGTGAGCTTCTAGGAGAATTTCCTGTGAGTATTTTGAAATTACAGAATTTAAAATTCCTTAATGTAGAAGCCAATCCAGATCTCAGAGTTTCTTTGCCAGTATTTCAACAAACTAGTCCTCTCATGTCACTGAGAGTTTCCGGAACAAGGTTTTCAGGAGACCTCCCTTCTTCAATTGAAAAGCTTGATTCATTGATTGAGTTAGTTGCTAGTGGATGCAATTTTTCAGGGTTGCTTCCATCTTCACTCGGTAATCTTAGGCAGCTGGTTTATTTAGACCTTTCAAATAACACACTTTCTGGCTCAATCCCAGATTCTTTGGCGACCATTACCCAACTGTCACATCTGTCACTTGAGGATAATCAGTTCAGTGGTTACATCCCATCTTCTCTAGGAAACCTTACCCAGGTCACTGAGTTACACCTTTCTGGTAACGATTTCGGGGGTTACATCCCGTCTTCCATTGGAAATCTCAACCAGCTCGTAAGACTTTCGCTTTCTATGAATCAATTAACTGGGCCAATCCCCTCTTCACTAGGAAATCTTAGCAAGCTAACTTACTTAGATCTTTCGTCAAATAATTTGCACAGTTCCATTCCTGAGTCCTTATCCAATCTCACGAATCTCGAGATGCTTCATCTAGAGAGTAATAGTCTGAGCGGCAAAGTGAATTTCCACATGTTTCTAAAGCTGCAAAATCTCGTCAGACTGCATTTATCTGGAAATAAATTGGAATTATTGCTCGAGGAGACAAGATTTATGAATGCAACAACAACTTTTCCAAAGTTCGTAGCTCTGGGATTGGGTTCTTGCAACATAACAGAGTTCCCAAGTTTCCTAAGATATCAAGAAAATTTGCGATGGCTGGATCTTGCTGAGAATGGAATGCACGGCCAAGTACCGAGATGGATGTGGAATGTAAGCACAGAAAGTTTGACAGTCATGAACATTTCTCATAACTTCCTTTCTGGCTTTGACCATCCTCCTGTTGTTCTTTCGTGGAGCGGACTACAAATCTTGGATCTTTCGTACAACATGATTCAGGGATCAGTACTGATACCTTCACCATCCATCGAGTACTATCTATTTACAGACAACGGGCTAAGTGGACAAGTTTCACCTTTGATTTGCAATCTGACTTCTCTGAAGTACCTTGATTTGTCAAACAACAAGTTGAGTGGGATGCTTCCGCAGTGTCTCGGGAACTTTAGTGATAATTTGCAAGTTTTAGACCTTGGAAAGAACTCTTTTGAAGGCCATCTCCCGCAAACTTACACGAGAAATCTGACGATGTTTGATGTTAGTGATAACAAATTGCAGGGGATACTACCAAGGTCGTTGGCGAATTGTGTGATGCTCGAGATTGTTGTTCTGTCAAACAATGAATTCAATGATGTTTTCCCCATTTGGTTGGGGTCTCTCCCGAAGTTGAAACTTTTGGCAATGCACCATAATGCGTTCAACGGTGTGATTAGGAAACCTGAAAAGAATCTTGATCATTTTCTTGAGTTGCGCATTCTTGATCTATCTGCTAATAATTTCTCAGGCAACTTCCCCTTTGAATACATCTTCTCTGGAAATGCAATCAAAGGTACCAATTCGTATCGGTTCAGATACATGAGGTTGAATACAACCTCAGATTGTGGTTATGGTCCTTCATATGTTGGCGGATATTGCTCCTTCACATTGACAAATAAAGGTGTGACCATATTCTATCCCAAGATTCCAGAGAACTTGGCAGCCATTGACATCTCAAGCAACAGATTTGAAGGGAGGGTTCCTGAATTCATTGGGGCCCTGACGGGGCTTCGTTTGCTCAATATGTCCAACAACATTCTCACTGGTTTGATCCCCTCATCCTTGGGAAAATTAAAGTTGCTTGAATCGTTGGACCTTTCACAGAACAAACTCTCAGGGGAGATCCCTCCACAACTGACACAAATTTCATTCCTTTCAAAATTCAATGTCTCTCACAACAATCTCAGTGGTCCTATTCCTCCTGGAACCCAGTTTGCTACATTTGACAGTACTTCATATGAAGGAAACCTGCGGTTGTGTGGAGATCCACTGCCAAAGAAATGTGGCAATGAAGCTCCTCGATTGCTACCTTCAACAGAAGAAGAAAATGGTTCTGATTTTGGAAATGAATTGGATTGGAAATTTGTTCTGGCAGGATCTGTGAGTGGGTTGCTAGTTGGAGTGGTTCTTGCAGACGTTCTCGTCACAAGGAAGCGCGAGTATTTCTTTAAGATTGTGGGGATGCTAATCAGACTAATGAAAAAGGAAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8

Protein Analysis

1009

Amino Acids

111.61

Weight (kDa)

6.26

Isoelectric Point (pI)

41.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 50 - 99 2.6e-06 Leucine rich repeat N-terminal domain
LRR_14 PF23598 289 - 389 3.6e-09 Leucine-rich repeat region
LRR_8 PF13855 319 - 369 5.7e-06 Leucine rich repeat
LRR_8 PF13855 334 - 393 6.8e-06 Leucine rich repeat
LRR_14 PF23598 377 - 564 1.3e-10 Leucine-rich repeat region
LRR_8 PF13855 382 - 441 5e-07 Leucine rich repeat
LRR_8 PF13855 406 - 465 3e-08 Leucine rich repeat
LRR_8 PF13855 673 - 732 8.6e-07 Leucine rich repeat
LRR_8 PF13855 824 - 883 3.5e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2957
Acc16I TGCGCA 1 cut(s) 2252
Acc36I ACCTGC 1 cut(s) 2793
Acc65I GGTACC 1 cut(s) 2330
AccB1I GGYRCC 1 cut(s) 2330
AccBSI CCGCTC 2 cut(s) 1398, 1743
AccII CGCG 1 cut(s) 2973
AccIII TCCGGA 1 cut(s) 878
AciI CCGC 6 cut(s) 1398, 1743, 1928, 2003, 2406, 2788
AclWI GGATC 8 cut(s) 558, 1614, 1767, 1792, 2581, 2653, 2795, 2920
AcoI YGGCCR 1 cut(s) 1630
AcuI CTGAAG 3 cut(s) 377, 614, 1904
AfaI GTAC 8 cut(s) 687, 1638, 1769, 1791, 1817, 1889, 2332, 2767
AfiI CCNNNNNNNGG 4 cut(s) 151, 885, 1144, 2541
AflIII ACRYGT 1 cut(s) 1416
AhlI ACTAGT 1 cut(s) 851
AjnI CCWGG 2 cut(s) 1143, 2737
AjuI GAANNNNNNNTTGG 2 cut(s) 1252, 1284
AloI GAACNNNNNNTCC 2 cut(s) 1088, 1120
Alw26I GTCTC 6 cut(s) 347, 891, 1481, 1940, 2160, 2710
AlwI GGATC 8 cut(s) 558, 1614, 1767, 1792, 2581, 2653, 2795, 2920
AlwNI CAGNNNCTG 3 cut(s) 257, 400, 2915
Ama87I CYCGRG 4 cut(s) 1364, 1481, 1937, 2096
Aor13HI TCCGGA 1 cut(s) 878
AoxI GGCC 4 cut(s) 1256, 1630, 1993, 2532
ApaI GGGCCC 1 cut(s) 2536
ApeKI GCWGC 8 cut(s) 124, 127, 254, 257, 270, 1000, 1429, 2477
ArsI GACNNNNNNTTYG 2 cut(s) 224, 256
Asp700I GAANNNNTTC 1 cut(s) 651
Asp718I GGTACC 1 cut(s) 2330
AspLEI GCGC 2 cut(s) 2253, 2973
AspS9I GGNCC 6 cut(s) 1256, 2390, 2532, 2533, 2629, 2726
AsuHPI GGTGA 5 cut(s) 227, 593, 661, 1794, 1848
AsuII TTCGAA 1 cut(s) 59
AvaI CYCGRG 4 cut(s) 1364, 1481, 1937, 2096
AvaII GGWCC 3 cut(s) 2390, 2629, 2726
BaeGI GKGCMC 1 cut(s) 2536
BanI GGYRCC 1 cut(s) 2330
BanII GRGCYC 1 cut(s) 2536
BauI CACGAG 1 cut(s) 2014
BbsI GAAGAC 2 cut(s) 308, 1188
BbvI GCAGC 8 cut(s) 136, 139, 241, 244, 257, 1012, 1416, 2489
BceAI ACGGC 1 cut(s) 1645
BciT130I CCWGG 2 cut(s) 1145, 2739
BciVI GTATCC 1 cut(s) 2055
BclI TGATCA 2 cut(s) 3, 2233
BcoDI GTCTC 6 cut(s) 347, 891, 1481, 1940, 2160, 2710
BcuI ACTAGT 1 cut(s) 851
BfmI CTRYAG 1 cut(s) 122
BfuAI ACCTGC 1 cut(s) 2793
BfuI GTATCC 1 cut(s) 2055
BglII AGATCT 2 cut(s) 817, 1303
BisI GCNGC 9 cut(s) 125, 128, 255, 258, 271, 1001, 1399, 1430, 2478
BlsI GCNGC 9 cut(s) 126, 129, 256, 259, 272, 1002, 1400, 1431, 2479
BmcAI AGTACT 3 cut(s) 1791, 1817, 2767
Bme1390I CCNGG 2 cut(s) 1145, 2739
Bme18I GGWCC 3 cut(s) 2390, 2629, 2726
BmeT110I CYCGRG 4 cut(s) 1364, 1481, 1937, 2096
BmgT120I GGNCC 6 cut(s) 1256, 2390, 2532, 2533, 2629, 2726
BmiI GGNNCC 5 cut(s) 2332, 2517, 2533, 2534, 2743
BmrFI CCNGG 2 cut(s) 1145, 2739
BmrI ACTGGG 2 cut(s) 1263, 2740
BmsI GCATC 6 cut(s) 257, 944, 1359, 1911, 2082, 2988
BmuI ACTGGG 2 cut(s) 1263, 2740
BpiI GAAGAC 2 cut(s) 308, 1188
BplI GAGNNNNNCTC 2 cut(s) 57, 89
BpmI CTGGAG 2 cut(s) 155, 544
Bpu14I TTCGAA 1 cut(s) 59
BpuEI CTTGAG 3 cut(s) 1112, 2264, 2476
BsaBI GATNNNNATC 1 cut(s) 3002
BsaI GGTCTC 2 cut(s) 891, 2160
BsaJI CCNNGG 5 cut(s) 696, 1143, 1972, 2069, 2598
BsaWI WCCGGW 1 cut(s) 878
BsaXI ACNNNNNCTCC 2 cut(s) 565, 595
Bsc4I CCNNNNNNNGG 4 cut(s) 151, 885, 1144, 2541
Bse1I ACTGG 8 cut(s) 172, 561, 604, 683, 836, 1258, 2584, 2746
Bse3DI GCAATG 2 cut(s) 2187, 2830
Bse8I GATNNNNATC 1 cut(s) 3002
BseAI TCCGGA 1 cut(s) 878
BseBI CCWGG 2 cut(s) 1145, 2739
BseDI CCNNGG 5 cut(s) 696, 1143, 1972, 2069, 2598
BseJI GATNNNNATC 1 cut(s) 3002
BseLI CCNNNNNNNGG 4 cut(s) 151, 885, 1144, 2541
BseMI GCAATG 2 cut(s) 2187, 2830
BseNI ACTGG 8 cut(s) 172, 561, 604, 683, 836, 1258, 2584, 2746
BseRI GAGGAG 4 cut(s) 167, 716, 1499, 2823
BseSI GKGCMC 1 cut(s) 2536
BseXI GCAGC 8 cut(s) 136, 139, 241, 244, 257, 1012, 1416, 2489
BsgI GTGCAG 1 cut(s) 663
Bsh1236I CGCG 1 cut(s) 2973
BshFI GGCC 4 cut(s) 1258, 1632, 1995, 2534
BshNI GGYRCC 1 cut(s) 2330
BsiHKCI CYCGRG 4 cut(s) 1364, 1481, 1937, 2096
BsiSI CCGG 2 cut(s) 348, 879
BslFI GGGAC 1 cut(s) 293
BslI CCNNNNNNNGG 4 cut(s) 151, 885, 1144, 2541
BsmAI GTCTC 6 cut(s) 347, 891, 1481, 1940, 2160, 2710
BsmFI GGGAC 1 cut(s) 293
BsmI GAATGC 3 cut(s) 1507, 1629, 2253
BsnI GGCC 4 cut(s) 1258, 1632, 1995, 2534
Bso31I GGTCTC 2 cut(s) 891, 2160
BsoBI CYCGRG 4 cut(s) 1364, 1481, 1937, 2096
Bsp119I TTCGAA 1 cut(s) 59
Bsp120I GGGCCC 1 cut(s) 2532
Bsp1286I GDGCHC 1 cut(s) 2536
Bsp13I TCCGGA 1 cut(s) 878
Bsp19I CCATGG 1 cut(s) 696
BspACI CCGC 6 cut(s) 1398, 1743, 1928, 2003, 2406, 2788
BspANI GGCC 4 cut(s) 1258, 1632, 1995, 2534
BspEI TCCGGA 1 cut(s) 878
BspFNI CGCG 1 cut(s) 2973
BspHI TCATGA 1 cut(s) 1680
BspLI GGNNCC 5 cut(s) 2332, 2517, 2533, 2534, 2743
BspMAI CTGCAG 1 cut(s) 126
BspMI ACCTGC 1 cut(s) 2793
BspPI GGATC 8 cut(s) 558, 1614, 1767, 1792, 2581, 2653, 2795, 2920
BspT104I TTCGAA 1 cut(s) 59
BspT107I GGYRCC 1 cut(s) 2330
BspTNI GGTCTC 2 cut(s) 891, 2160
BsrBI CCGCTC 2 cut(s) 1398, 1743
BsrDI GCAATG 2 cut(s) 2187, 2830
BsrI ACTGG 8 cut(s) 172, 561, 604, 683, 836, 1258, 2584, 2746
BssECI CCNNGG 5 cut(s) 696, 1143, 1972, 2069, 2598
BssSI CACGAG 1 cut(s) 2014
BssT1I CCWWGG 4 cut(s) 696, 1972, 2069, 2598
Bst2BI CACGAG 1 cut(s) 2014
Bst2UI CCWGG 2 cut(s) 1145, 2739
Bst4CI ACNGT 6 cut(s) 581, 1077, 1328, 1678, 2204, 2765
Bst6I CTCTTC 3 cut(s) 80, 380, 1273
BstBI TTCGAA 1 cut(s) 59
BstC8I GCNNGC 2 cut(s) 53, 1289
BstDSI CCRYGG 1 cut(s) 696
BstENI CCTNNNNNAGG 1 cut(s) 1142
BstFNI CGCG 1 cut(s) 2973
BstHHI GCGC 2 cut(s) 2253, 2973
BstMAI GTCTC 6 cut(s) 347, 891, 1481, 1940, 2160, 2710
BstMWI GCNNNNNNNGC 3 cut(s) 357, 2412, 2551
BstNI CCWGG 2 cut(s) 1145, 2739
BstNSI RCATGY 2 cut(s) 55, 1420
BstSCI CCNGG 2 cut(s) 1143, 2737
BstSFI CTRYAG 1 cut(s) 122
BstSLI GKGCMC 1 cut(s) 2536
BstUI CGCG 1 cut(s) 2973
BstV1I GCAGC 8 cut(s) 136, 139, 241, 244, 257, 1012, 1416, 2489
BstV2I GAAGAC 2 cut(s) 308, 1188
BstX2I RGATCY 8 cut(s) 550, 817, 1303, 1606, 1759, 2658, 2800, 2912
BstXI CCANNNNNNTGG 1 cut(s) 2149
BstYI RGATCY 8 cut(s) 550, 817, 1303, 1606, 1759, 2658, 2800, 2912
BsuI GTATCC 1 cut(s) 2055
BsuRI GGCC 4 cut(s) 1258, 1632, 1995, 2534
BtgI CCRYGG 1 cut(s) 696
BtgZI GCGATG 1 cut(s) 1612
BtsI GCAGTG 3 cut(s) 112, 1937, 2804
BveI ACCTGC 1 cut(s) 2793
Cac8I GCNNGC 2 cut(s) 53, 1289
CaiI CAGNNNCTG 3 cut(s) 257, 400, 2915
CciI TCATGA 1 cut(s) 1680
CfoI GCGC 2 cut(s) 2253, 2973
Cfr13I GGNCC 6 cut(s) 1256, 2390, 2532, 2533, 2629, 2726
Csp6I GTAC 8 cut(s) 686, 1637, 1768, 1790, 1816, 1888, 2331, 2766
CspCI CAANNNNNGTGG 4 cut(s) 1897, 1932, 2704, 2739
CviQI GTAC 8 cut(s) 686, 1637, 1768, 1790, 1816, 1888, 2331, 2766
DraI TTTAAA 1 cut(s) 789
DrdI GACNNNNNNGTC 1 cut(s) 2957
DseDI GACNNNNNNGTC 1 cut(s) 2957
EaeI YGGCCR 1 cut(s) 1630
Eam1104I CTCTTC 3 cut(s) 80, 380, 1273
EarI CTCTTC 3 cut(s) 80, 380, 1273
EciI GGCGGA 1 cut(s) 2421
Eco130I CCWWGG 4 cut(s) 696, 1972, 2069, 2598
Eco24I GRGCYC 1 cut(s) 2536
Eco31I GGTCTC 2 cut(s) 891, 2160
Eco32I GATATC 1 cut(s) 1583
Eco47I GGWCC 3 cut(s) 2390, 2629, 2726
Eco57I CTGAAG 3 cut(s) 377, 614, 1904
Eco88I CYCGRG 4 cut(s) 1364, 1481, 1937, 2096
EcoNI CCTNNNNNAGG 1 cut(s) 1142
EcoO109I RGGNCCY 2 cut(s) 2532, 2533
EcoRI GAATTC 2 cut(s) 2123, 2522
EcoRII CCWGG 2 cut(s) 1143, 2737
EcoRV GATATC 1 cut(s) 1583
EcoT14I CCWWGG 4 cut(s) 696, 1972, 2069, 2598
EcoT38I GRGCYC 1 cut(s) 2536
ErhI CCWWGG 4 cut(s) 696, 1972, 2069, 2598
FalI AAGNNNNNCTT 2 cut(s) 170, 202
FaqI GGGAC 1 cut(s) 293
FauI CCCGC 1 cut(s) 2010
FauNDI CATATG 2 cut(s) 2398, 2773
FbaI TGATCA 2 cut(s) 3, 2233
Fnu4HI GCNGC 9 cut(s) 125, 128, 255, 258, 271, 1001, 1399, 1430, 2478
FriOI GRGCYC 1 cut(s) 2536
Fsp4HI GCNGC 9 cut(s) 125, 128, 255, 258, 271, 1001, 1399, 1430, 2478
FspI TGCGCA 1 cut(s) 2252
GlaI GCGC 2 cut(s) 2252, 2972
GluI GCNGC 9 cut(s) 125, 128, 255, 258, 271, 1001, 1399, 1430, 2478
GsuI CTGGAG 2 cut(s) 155, 544
HaeIII GGCC 4 cut(s) 1258, 1632, 1995, 2534
HapII CCGG 2 cut(s) 348, 879
HhaI GCGC 2 cut(s) 2253, 2973
Hin6I GCGC 2 cut(s) 2251, 2971
HinP1I GCGC 2 cut(s) 2251, 2971
HindIII AAGCTT 3 cut(s) 184, 650, 920
HpaII CCGG 2 cut(s) 348, 879
HphI GGTGA 5 cut(s) 227, 593, 661, 1794, 1848
Hpy166II GTNNAC 1 cut(s) 1847
Hpy8I GTNNAC 1 cut(s) 1847
HpyAV CCTTC 9 cut(s) 612, 915, 1809, 1985, 2403, 2428, 2501, 2771, 2856
HpyCH4III ACNGT 6 cut(s) 581, 1077, 1328, 1678, 2204, 2765
HpyCH4IV ACGT 1 cut(s) 2952
HpyF10VI GCNNNNNNNGC 3 cut(s) 357, 2412, 2551
HpySE526I ACGT 1 cut(s) 2952
HspAI GCGC 2 cut(s) 2251, 2971
Kpn2I TCCGGA 1 cut(s) 878
KpnI GGTACC 1 cut(s) 2334
Ksp22I TGATCA 2 cut(s) 3, 2233
LmnI GCTCC 7 cut(s) 174, 365, 471, 668, 1740, 2420, 2836
Lsp1109I GCAGC 8 cut(s) 136, 139, 241, 244, 257, 1012, 1416, 2489
LweI GCATC 6 cut(s) 257, 944, 1359, 1911, 2082, 2988
MaeII ACGT 1 cut(s) 2952
MbiI CCGCTC 2 cut(s) 1398, 1743
MfeI CAATTG 1 cut(s) 912
MflI RGATCY 8 cut(s) 550, 817, 1303, 1606, 1759, 2658, 2800, 2912
MhlI GDGCHC 1 cut(s) 2536
MlyI GAGTC 1 cut(s) 1349
MmeI TCCRAC 4 cut(s) 387, 2589, 2607, 2914
MroI TCCGGA 1 cut(s) 878
MroXI GAANNNNTTC 1 cut(s) 651
MseI TTAA 8 cut(s) 177, 477, 635, 788, 798, 1250, 2609, 2985
MslI CAYNNNNRTG 1 cut(s) 2190
MspA1I CMGCKG 2 cut(s) 254, 1003
MspI CCGG 2 cut(s) 348, 879
MspR9I CCNGG 2 cut(s) 1145, 2739
MunI CAATTG 1 cut(s) 912
Mva1269I GAATGC 3 cut(s) 1507, 1629, 2253
MvaI CCWGG 2 cut(s) 1145, 2739
MvnI CGCG 1 cut(s) 2973
MwoI GCNNNNNNNGC 3 cut(s) 357, 2412, 2551
NcoI CCATGG 1 cut(s) 696
NdeI CATATG 2 cut(s) 2398, 2773
NlaIV GGNNCC 5 cut(s) 2332, 2517, 2533, 2534, 2743
NmuCI GTSAC 7 cut(s) 667, 864, 1077, 1086, 1147, 2440, 2959
NsbI TGCGCA 1 cut(s) 2252
NspI RCATGY 2 cut(s) 55, 1420
NspV TTCGAA 1 cut(s) 59
PaeI GCATGC 1 cut(s) 55
PaeR7I CTCGAG 3 cut(s) 1364, 1481, 2096
PagI TCATGA 1 cut(s) 1680
PciI ACATGT 1 cut(s) 1416
PctI GAATGC 3 cut(s) 1507, 1629, 2253
PdmI GAANNNNTTC 1 cut(s) 651
PflFI GACNNNGTC 1 cut(s) 284
PfoI TCCNGGA 1 cut(s) 2737
PkrI GCNGC 9 cut(s) 126, 129, 256, 259, 272, 1002, 1400, 1431, 2479
PleI GAGTC 1 cut(s) 1348
PpsI GAGTC 1 cut(s) 1348
PscI ACATGT 1 cut(s) 1416
Psp6I CCWGG 2 cut(s) 1143, 2737
PspGI CCWGG 2 cut(s) 1143, 2737
PspN4I GGNNCC 5 cut(s) 2332, 2517, 2533, 2534, 2743
PspOMI GGGCCC 1 cut(s) 2532
PspPI GGNCC 6 cut(s) 1256, 2390, 2532, 2533, 2629, 2726
PspXI VCTCGAGB 1 cut(s) 1481
PstI CTGCAG 1 cut(s) 126
PstNI CAGNNNCTG 3 cut(s) 257, 400, 2915
PsuI RGATCY 8 cut(s) 550, 817, 1303, 1606, 1759, 2658, 2800, 2912
PsyI GACNNNGTC 1 cut(s) 284
PvuII CAGCTG 2 cut(s) 254, 1003
RsaI GTAC 8 cut(s) 687, 1638, 1769, 1791, 1817, 1889, 2332, 2767
RsaNI GTAC 8 cut(s) 686, 1637, 1768, 1790, 1816, 1888, 2331, 2766
RseI CAYNNNNRTG 1 cut(s) 2190
SaqAI TTAA 8 cut(s) 177, 477, 635, 788, 798, 1250, 2609, 2985
SatI GCNGC 9 cut(s) 125, 128, 255, 258, 271, 1001, 1399, 1430, 2478
Sau96I GGNCC 6 cut(s) 1256, 2390, 2532, 2533, 2629, 2726
ScaI AGTACT 3 cut(s) 1791, 1817, 2767
SchI GAGTC 1 cut(s) 1349
ScrFI CCNGG 2 cut(s) 1145, 2739
SduI GDGCHC 1 cut(s) 2536
SfaNI GCATC 6 cut(s) 257, 944, 1359, 1911, 2082, 2988
SfcI CTRYAG 1 cut(s) 122
Sfr274I CTCGAG 3 cut(s) 1364, 1481, 2096
SfuI TTCGAA 1 cut(s) 59
SinI GGWCC 3 cut(s) 2390, 2629, 2726
SlaI CTCGAG 3 cut(s) 1364, 1481, 2096
SmiMI CAYNNNNRTG 1 cut(s) 2190
SmlI CTYRAG 6 cut(s) 1091, 1364, 1481, 2096, 2243, 2491
SmoI CTYRAG 6 cut(s) 1091, 1364, 1481, 2096, 2243, 2491
SpeI ACTAGT 1 cut(s) 851
SphI GCATGC 1 cut(s) 55
SsiI CCGC 6 cut(s) 1398, 1743, 1928, 2003, 2406, 2788
StyD4I CCNGG 2 cut(s) 1143, 2737
StyI CCWWGG 4 cut(s) 696, 1972, 2069, 2598
TaaI ACNGT 6 cut(s) 581, 1077, 1328, 1678, 2204, 2765
TaiI ACGT 1 cut(s) 2955
TaqI TCGA 7 cut(s) 59, 288, 1365, 1482, 1812, 2097, 2836
TatI WGTACW 3 cut(s) 1789, 1815, 2765
TauI GCSGC 1 cut(s) 1401
Tru1I TTAA 8 cut(s) 177, 477, 635, 788, 798, 1250, 2609, 2985
Tru9I TTAA 8 cut(s) 177, 477, 635, 788, 798, 1250, 2609, 2985
TseFI GTSAC 7 cut(s) 667, 864, 1077, 1086, 1147, 2440, 2959
TseI GCWGC 8 cut(s) 124, 127, 254, 257, 270, 1000, 1429, 2477
Tsp45I GTSAC 7 cut(s) 667, 864, 1077, 1086, 1147, 2440, 2959
TspGWI ACGGA 2 cut(s) 458, 655
Tth111I GACNNNGTC 1 cut(s) 284
VpaK11BI GGWCC 3 cut(s) 2390, 2629, 2726
XagI CCTNNNNNAGG 1 cut(s) 1142
XbaI TCTAGA 1 cut(s) 1378
XceI RCATGY 2 cut(s) 55, 1420
XhoI CTCGAG 3 cut(s) 1364, 1481, 2096
XmnI GAANNNNTTC 1 cut(s) 651
ZrmI AGTACT 3 cut(s) 1791, 1817, 2767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.